<blockquote class='timewarn'>
<font color='#008800'><b>TimeWarn: </b>2013-01-11.110739	Reading sequences	/home/rsat/rsa-tools/public_html/tmp/wwwrun/2013/01/11/peak-motifs.2013-01-11.110705_2013-01-11.110705_PdhmNx/data/sequences/peak-motifs_test_purged_ml30_mis0.fasta</font>
</blockquote><br><hr size=3>
<blockquote class='timewarn'>
<font color='#008800'><b>TimeWarn: </b>2013-01-11.110742		Reading sequence	500	id=EP_500	length_sum=100500	last_pos=195	ref_pos=101</font>
</blockquote><br><hr size=3>
<blockquote class='timewarn'>
<font color='#008800'><b>TimeWarn: </b>2013-01-11.110744		Reading sequence	1000	id=EP_1000	length_sum=201000	last_pos=195	ref_pos=101</font>
</blockquote><br><hr size=3>
<blockquote class='timewarn'>
<font color='#008800'><b>TimeWarn: </b>2013-01-11.110746		Reading sequence	1500	id=EP_1500	length_sum=301500	last_pos=195	ref_pos=101</font>
</blockquote><br><hr size=3>
<blockquote class='timewarn'>
<font color='#008800'><b>TimeWarn: </b>2013-01-11.110748		Reading sequence	2000	id=EP_2000	length_sum=402000	last_pos=195	ref_pos=101</font>
</blockquote><br><hr size=3>
<blockquote class='timewarn'>
<font color='#008800'><b>TimeWarn: </b>2013-01-11.110750	Calculating stats on sequence lengths</font>
</blockquote><br><hr size=3>
<blockquote class='timewarn'>
<font color='#008800'><b>TimeWarn: </b>2013-01-11.110750	Finished reading sequences. Number of patterns	16531</font>
</blockquote><br><hr size=3>
<blockquote class='timewarn'>
<font color='#008800'><b>TimeWarn: </b>2013-01-11.110750	Checking DNA</font>
</blockquote><br><hr size=3>
<blockquote class='timewarn'>
<font color='#008800'><b>TimeWarn: </b>2013-01-11.110750	Calculating classes</font>
</blockquote><br><hr size=3>
<blockquote class='timewarn'>
<font color='#008800'><b>TimeWarn: </b>2013-01-11.110750	Calculating sums of occurrences</font>
</blockquote><br><hr size=3>
<blockquote class='timewarn'>
<font color='#008800'><b>TimeWarn: </b>2013-01-11.110750	Summing occurrences of reverse complementary patterns</font>
</blockquote><br><hr size=3>
<blockquote class='timewarn'>
<font color='#008800'><b>TimeWarn: </b>2013-01-11.110752	Grouping patterns by pairs of reverse complements</font>
</blockquote><br><hr size=3>
<blockquote class='information'>
<font color='#008800'><b>Information: </b>Number of patterns before filtering	8186</font>
</blockquote><br><hr size=3>
<blockquote class='information'>
<font color='#008800'><b>Information: </b>Filtered by occurrences	8186	remaining patterns</font>
</blockquote><br><hr size=3>
<blockquote class='timewarn'>
<font color='#008800'><b>TimeWarn: </b>2013-01-11.110752	Calculating expected occurrences</font>
</blockquote><br><hr size=3>
<blockquote class='timewarn'>
<font color='#008800'><b>TimeWarn: </b>2013-01-11.110753	Calculating chi values</font>
</blockquote><br><hr size=3>
<blockquote class='information'>
<font color='#008800'><b>Information: </b>Chi and sig computed	79	remaining patterns</font>
</blockquote><br><hr size=3>
<blockquote class='timewarn'>
<font color='#008800'><b>TimeWarn: </b>2013-01-11.110754	Printing results	79	patterns</font>
</blockquote><br><hr size=3>
<blockquote class='timewarn'>
<font color='#008800'><b>TimeWarn: </b>2013-01-11.110754	Sorting results</font>
</blockquote><br><hr size=3>
<blockquote class='timewarn'>
<font color='#008800'><b>TimeWarn: </b>2013-01-11.110754	Sorted	79	patterns</font>
</blockquote><br><hr size=3>
<blockquote class='timewarn'>
<font color='#008800'><b>TimeWarn: </b>2013-01-11.110754	Retained	50	top-raking patterns</font>
</blockquote><br><hr size=3>
<blockquote class='timewarn'>
<font color='#008800'><b>TimeWarn: </b>2013-01-11.110754	Printing results</font>
</blockquote><br><hr size=3>
;2013-01-11.110754	generating the graphs ... 
<blockquote class='information'>
<font color='#008800'><b>Information: </b>Index file	/home/rsat/rsa-tools/public_html/tmp/wwwrun/2013/01/11/peak-motifs.2013-01-11.110705_2013-01-11.110705_PdhmNx/results/positions_7nt/peak-motifs_positions-2str-noov_7nt_ci50_graph_index.html</font>
</blockquote><br><hr size=3>
<blockquote class='warning'>
<font color='#FFAA00'><b>Warning: </b>Exported 21 graphs</font>
</blockquote><br><hr size=3>

real	0m17.582s
user	0m17.172s
sys	0m0.314s
