>>R25_0 ID R25_0_00001 standard; DNA; UNC; 410 BP. XX AC R25_0_00001 XX DT 3-Jun-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_00001 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001a09.f1; x001a09.r1; XX FH Key Location/Qualifiers FH FT source 1..410 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_00001_A FT misc_binding 82..117 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00001_1" FT /note="Base quality score is 3.9115e-02" FT misc_binding 117..150 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00001_2" FT /note="Base quality score is 5.7546e-01" FT misc_binding 150..183 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00001_3" FT /note="Base quality score is 5.4126e-01" FT misc_binding 183..216 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00001_4" FT /note="Base quality score is 6.5753e-03" FT misc_binding 216..249 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00001_5" FT /note="Base quality score is 2.0618e-02" FT misc_binding 249..282 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00001_6" FT /note="Base quality score is 3.3831e-03" FT misc_binding 282..315 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00001_7" FT /note="Base quality score is 6.7044e-03" FT misc_binding 315..348 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00001_8" FT /note="Base quality score is 7.6667e-01" XX SQ Sequence 410 BP; 90 A; 86 C; 112 G; 122 T; 0 other; GGCCCTCCAG ATCATGCTCG ACGCCCGCCA GTGTGATGGA TATCTGCAGA ATTCCAGCAC ACTGGCGGCC GTTACTAGTG GATCTATGTG TCGAGTCATA GGTTCGTGTC TATTAGATCT AATCTTTGCG TCAGAAGGGC TTGGCTTAGA TCTACCACTT ATGGCATATC GTCAGCTAGT AGATCTAGTT CATATTTTTG GCCTGGAAGG GATAGATCTA CCTCACCTGG CCGTGCCTTG TTATCTAGAT CTAATCGCGA TTGGAGCCGG AATTGATGTA GATCTATCGG GGGGGGTTAG TTCGGGCTGA ATAGATCTAG ATGGCGGTTC AGTTGATGGG GTGTTAGACG AGCTCGGTAC CAAGCTGAAG CATAGCTTGA TATTCTATAT TCACCTAATC TGTCGAGTCG // ID R25_0_00002 standard; DNA; UNC; 907 BP. XX AC R25_0_00002 XX DT 3-Jun-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_00002 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001e12.r1; x001e12.f1; XX FH Key Location/Qualifiers FH FT source 1..907 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_00002_A FT misc_binding 103..136 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00002_1" FT /note="Base quality score is 4.7044e-04" FT misc_binding 136..169 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00002_2" FT /note="Base quality score is 6.8151e-05" FT misc_binding 169..202 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00002_3" FT /note="Base quality score is 2.6855e-06" FT misc_binding 202..235 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00002_4" FT /note="Base quality score is 1.0379e-05" FT misc_binding 235..268 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00002_5" FT /note="Base quality score is 7.4619e-06" FT misc_binding 268..301 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00002_6" FT /note="Base quality score is 4.8929e-06" FT misc_binding 301..334 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00002_7" FT /note="Base quality score is 5.1755e-07" FT misc_binding 334..367 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00002_8" FT /note="Base quality score is 8.6610e-07" FT misc_binding 367..400 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00002_9" FT /note="Base quality score is 1.2706e-06" XX SQ Sequence 907 BP; 337 A; 210 C; 155 G; 201 T; 4 other; TCCTAAAGAG AAGAAAAAAG AAAAGAACAA GGATTACGCC AAGCTATTTA GGTGACACTA TAGAATACTC AAGCTATGCA TCAAGCTTGG TACCGAGCTC GGATCTACCG TTTATTGGAG TATCGTGGCG TGTAGATCTA TGTAGGAGTT TTCGGCGGTC AACGGTAGAT CTACAATTCC ACAAACTAGG GGCTCCGATA GATCTACGGT GTGATTTTTG GCAAAAAGTC ATAGATCTAA GGGATATGAG AACGCCCTAC GCGCTAGATC TAAGGCGCCC ATTATAGAGT TCATCGATAG ATCTATTTAT AAATAAGAAT GGTAAGCCCT TAGATCTACC TACCTCCCAT ACGTAACTCT GCTTAGATCT AGCCACTATA TGGAAAAATA TCAATGTAGA TCCACTAGTA ACGGCCGCCA GTGTGCTGGA ATTCTGCAGA TATCCATCAC ACTGGCGGCC GCTCGAGCAT GCATCTAGAG GGCCCAATTC GCCCTATAGT GAGTCGTATT ACAATTCACT GGCCGTCGTT TTACAACGTC GTGACTTGGG AAAACCTGGC GGCGTACACA GAGAAACCTG GTCTATCACA ACACACCGCA CACGTCTATT TAAAAGGCAA AAAACAATCA CAACACTACA CAACATCACA GGACACAATA AAAGACAACA CAGAAACAAG AAACTGAACA TACTACATAC CAAGACTCAC ACAAAATACA GACCAAACAA CAAACAGAAC ACAATAAATA AAAAATCTAT AAACCTACAA CAGCACAAAT ATGACAACAA ATACGAATGA ATAAAATATA CATAACTAAC ATAAAACAAT TACTCACTTC TTCCTCACAC ACTCTATCAA ATATCTTATN GTNNNGAAGC AGCACACACA AATTACTACA ACAAGCT // ID R25_0_00003 standard; DNA; UNC; 819 BP. XX AC R25_0_00003 XX DT 3-Jun-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_00003 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001e03.r1; x001e03.f1; XX FH Key Location/Qualifiers FH FT source 1..819 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_00003_A FT misc_binding 99..132 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00003_1" FT /note="Base quality score is 8.8836e-03" FT misc_binding 132..165 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00003_2" FT /note="Base quality score is 4.5859e-05" FT misc_binding 165..198 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00003_3" FT /note="Base quality score is 1.0999e-06" FT misc_binding 198..231 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00003_4" FT /note="Base quality score is 5.3748e-07" FT misc_binding 231..264 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00003_5" FT /note="Base quality score is 2.8653e-05" FT misc_binding 264..297 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00003_6" FT /note="Base quality score is 1.0098e-06" XX SQ Sequence 819 BP; 309 A; 176 C; 136 G; 198 T; 0 other; TTCACCACAG GAAACAGCTA TGACCATGAT TACGCCAAGC TATTTAGGTG ACACTATAGA ATACTCAAGC TATGCATCAA GCTTGGTACC GAGCTCGGAT CTATACCTCG CAACACGATA GTCCCCAATA GATCTAGCCT ATGGCTCCGC ATCATGACTG ATAGATCTAG TTTTTCGAAC TGCATGTGTG CTGTTAGATC TAGACTTTGA TTCAGCGTAG GGGACGGTAG ATCTAAATTT ATATTGGTTT CCGCCGATGA TAGATCTAGA GGAGTGTACT TGTTTTTTAT GAGTAGATCC ACTAGTAACG GCCGCCAGTG TGCTGGAATT CTGCAGATAT CCATCACACT GGCGGCCGCT CGAGCATGCA TCTAGAGGGC CCAATTCGCC CTATAGTGAG TCGTATTACA ATTCACTGGC CGTCGTTTTA CAACGTCGTG ACTGGGAAAA CCCTGGCGAC ACTGAATATT GATAAAGGAG CAACCATTAG GCAGAGATAA TACAACACAC AAGCGAACAT AAACGCAGAC AGACAAACAA TCATAATATC ACTCAGACAA TCTAACACAA CGTTAGATAG ACACCAACTA GATAGTAAAC ATAAAAAATA AAAAAAATAT TCCTACAACA AAACAAAAAG CAAACCAAAA TTATATGAAA TAACAACATA CTACACTCAG AAGAAAAGTA CAATAACAAC TAATAATAAA AAAAAATAAT ACTTAGCAAT ATAACGAAAA ATAATAAAGC AAAAACAATC ATCCTCACAC ATATTCCCAC ACTAAATACA CTATATTCAT TTAGCTATTT ATAATAACG // ID R25_0_00004 standard; DNA; UNC; 886 BP. XX AC R25_0_00004 XX DT 3-Jun-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_00004 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001d06.r1; x001d06.f1; XX FH Key Location/Qualifiers FH FT source 1..886 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_00004_A FT misc_binding 98..131 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00004_1" FT /note="Base quality score is 9.4489e-05" FT misc_binding 131..164 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00004_2" FT /note="Base quality score is 4.3106e-05" FT misc_binding 164..197 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00004_3" FT /note="Base quality score is 5.6309e-06" FT misc_binding 197..229 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00004_4" FT /note="Base quality score is 4.1280e-07" FT misc_binding 229..262 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00004_5" FT /note="Base quality score is 3.7940e-08" FT misc_binding 262..295 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00004_6" FT /note="Base quality score is 3.5351e-07" FT misc_binding 295..328 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00004_7" FT /note="Base quality score is 1.7805e-07" FT misc_binding 328..361 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00004_8" FT /note="Base quality score is 1.7651e-06" FT misc_binding 361..394 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00004_9" FT /note="Base quality score is 7.8361e-06" XX SQ Sequence 886 BP; 329 A; 222 C; 174 G; 161 T; 0 other; TTCACCCGGA AACAAGCAAG GACCAGGATT ACGCCAAGCT ATTTAGGTGA CACTATAGAA TACTCAAGCT ATGCATCAAG CTTGGTACCG AGCTCGGATC TACAAGAATG ATTCTTAGGT TGCAAATTAG ATCTAACGAG TAAAATAAAC CGACCGACCA TAGATCTAAG TGTGCGCCCC CAGAATATGT AGCTAGATCT AACTGCGGTG CGCGCATGAA TCCCCAAGAT CTAGTGCGGG TGGGACTCGA ATTCCCGTTA GATCTAAAGC CACCACGGCT ACATCTGCGT ATAGATCTAC GTTCGTACAT CTCTCGCCGG CTCCTAGATC TAAAGTTTTT ACCCGGGCCC CACGTTCTAG ATCTACCATT CTGTTGAAGC TTATATGACT TAGATCCACT AGTAACGGCC GCCAGTGTGC TGGAATTCTG CAGATATCCA TCACACTGGC GGCCGCTCGA GCATGCATCT AGAGGGCCCA ATTCGCCCTA TAGTGAGTCG TATTACAATT CACTGGCCGT CGTTTACAAC GTCGTTGACT GGAAAACCTG GGCGGCAGAG ACACGTACAT ATGAGACAAA AATAGAAAAA AAAAACAAAA CACAACAACA CACAACCCGA CATCTCACTC ACATAAGAAA CACAACCAGC AAGCTAGCAA GAGACAAGAC ACTACCACCG CAACGAGAAG GCAACAATCG AAGAGATACA TACACAGCAA GAAACAACAC AAAAGAACAA GCTAAGAAGA GAGAACAGAA CGAACAAAAA AGACGACCAC AGCAACGCAA GAAGTCAAAG AATACCTAGA GAAAAACGAG AACATAACAA TAAATCAAGA ATAAAACAGA ACGGAACACT AAAAACATCA ACACCAGCAC AACTAG // ID R25_0_00005 standard; DNA; UNC; 843 BP. XX AC R25_0_00005 XX DT 3-Jun-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_00005 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001c06.r1; x001c06.f1; XX FH Key Location/Qualifiers FH FT source 1..843 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_00005_A FT misc_binding 73..106 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00005_1" FT /note="Base quality score is 3.3611e-05" FT misc_binding 106..139 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00005_2" FT /note="Base quality score is 1.9998e-06" FT misc_binding 139..172 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00005_3" FT /note="Base quality score is 1.3745e-06" FT misc_binding 172..205 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00005_4" FT /note="Base quality score is 3.5790e-05" FT misc_binding 205..238 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00005_5" FT /note="Base quality score is 2.4353e-05" FT misc_binding 238..271 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00005_6" FT /note="Base quality score is 3.0770e-06" FT misc_binding 271..304 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00005_7" FT /note="Base quality score is 5.2216e-06" XX SQ Sequence 843 BP; 271 A; 217 C; 200 G; 155 T; 0 other; TGATTACGCC AAGCTATTTA GGTGACACTA TAGAATACTC AAGCTATGCA TCAAGCTTGG TACCGAGCTC GGATCTATTG AGAGTTCTGG TAATCTGCAG AGTAGATCTA TAGACGCATT ATTGACCCCG TGAAGTAGAT CTAAAAGCTT ACCTGTGGCG ATCCTAGCTA GATCTACCGT GTTGGGCTTT ACGGAGGTTC TTAGATCTAG GCGGCTATTT TCAGGGGGGG TGGTTAGATC TACAAAGCGA GAATGGTCAC CTCCAACTAG ATCTACACCG CATCACCACC GCACGTAGGA TAGATCCACT AGTAACGGCC GCCAGTGTGC TGGAATTCTG CAGATATCCA TCACACTGGC GGCCGCTCGA GCATGCATCT AGAGGGCCCA ATTCGCCCTA TAGTGAGTCG TATTACAATT CACTGGCCGT CGTTTTACAA CGTCGTGACT GGGAAAACCC TGGCGAGCAG GAGCATGGTA CAGCCGCGAA CACACCCGAC CGGGGCGACA CCGCTCAACG CTCTCCTGCG CCGACACACA TCAGCATAGT CATAACAAAT GATCACATTA GGGCTACGAA CAGAAAGATC ACAAAAAGAG AAAAAAAAGC CATACGAGAC GACGAAAGTT GTACACGGAA CGTAAAAGAG ACGTGCACAA CAGAGACGTG AATAAAAGAA TGAGATGGAA CATATAGCGG GCCATAAAGC AACTAGTCGC AGCCCCAAAC ACAAAAATGA GAAGAAAACC ACGCCGACAC GGGAAGCAGC AATCAGCACA CACCAGCGAA AAAACCAGCA CGAGCCAACA GACTAACAAA GACCCGACCG CAGCCCGTCA TCC // ID R25_0_00006 standard; DNA; UNC; 442 BP. XX AC R25_0_00006 XX DT 3-Jun-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_00006 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001c02.r1; x001c02.f1; XX FH Key Location/Qualifiers FH FT source 1..442 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_00006_A FT misc_binding 94..126 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00006_1" FT /note="Base quality score is 8.4374e-05" FT misc_binding 126..159 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00006_2" FT /note="Base quality score is 5.9614e-03" FT misc_binding 159..192 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00006_3" FT /note="Base quality score is 4.7527e-05" FT misc_binding 192..225 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00006_4" FT /note="Base quality score is 1.2803e-03" FT misc_binding 225..258 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00006_5" FT /note="Base quality score is 2.5021e-04" FT misc_binding 258..291 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00006_6" FT /note="Base quality score is 9.8269e-03" FT misc_binding 291..324 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00006_7" FT /note="Base quality score is 2.6061e-04" XX SQ Sequence 442 BP; 111 A; 109 C; 109 G; 113 T; 0 other; TTCAACAGGA AACGGCAGGC CCGGATACCG CCAGCTATTT AGGTGACACT ATAGAATACT CAAGCTATGC ATCAAGCTTG GTACCGAGCT CGGATCTTCT TTGGCTGAAT ATGCAGGGAT TGTAGATCTA TAACGTCTGT CTCAAAGTAC ATATGTAGAT CTATGAGCAT GATCGACGGC ACCGAGCCTA GATCTAGCAC GGGGGGTGAC GTAGCTGCAT TTAGATCTAG AGTGTCGTCC TGTCCACTGT TAGCTAGATC TACGCTCAAC TATTCCCACC AACCGTCTAG ATCTATAGTC TTAGAGACGT GGGAAATGAT TAGATCCACT AGTAACGCCG CCAGTGTGCT GGAATTCTGC AGATATCCAT CACACTGGCG CCGCTCGGCA TGCATCTAGA GGGCCGATTC GCCCATAGTG AGTGTGTACA GTCCTGCCCT GT // ID R25_0_00007 standard; DNA; UNC; 799 BP. XX AC R25_0_00007 XX DT 3-Jun-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_00007 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001b03.r1; x001b03.f1; XX FH Key Location/Qualifiers FH FT source 1..799 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_00007_A FT misc_binding 101..134 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00007_1" FT /note="Base quality score is 2.5912e-04" FT misc_binding 134..167 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00007_2" FT /note="Base quality score is 2.8158e-07" FT misc_binding 167..200 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00007_3" FT /note="Base quality score is 1.0413e-06" FT misc_binding 200..232 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00007_4" FT /note="Base quality score is 5.5100e-08" FT misc_binding 232..265 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00007_5" FT /note="Base quality score is 1.6294e-07" FT misc_binding 265..298 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00007_6" FT /note="Base quality score is 4.0384e-06" FT misc_binding 298..331 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00007_7" FT /note="Base quality score is 2.5027e-07" FT misc_binding 331..364 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00007_8" FT /note="Base quality score is 5.4344e-06" FT misc_binding 364..397 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00007_9" FT /note="Base quality score is 2.8401e-06" FT misc_binding 397..430 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00007_10" FT /note="Base quality score is 1.6888e-06" XX SQ Sequence 799 BP; 259 A; 189 C; 152 G; 199 T; 0 other; TTTAACACCC CAGAAACAGC TATGACCATG ATTACGCCAA GCTATTTAGG TGACACTATA GAATACTCAA GCTATGCATC AAGCTTGGTA CCGAGCTCGG ATCTAGAGGC AAAATAAATT CAATAAGGTT TAGATCTATT CGGAACAGGA GAATGTCGTA TTTTAGATCT AACGAGAGAG GATAAACATT GGTTCCAAGA TCTATAGCGG TATTTTTCCG TGAACGTTTA GATCTAAGTC TCGTCCGTGC ATTATTCGCC ATAGATCTAT ATCATCCGCT CGCGCCTTGT CCTTTAGATC TATACTCCAC GAGCACTGGG TTCGGACTAG ATCTATGGGA GGATCCCGTG TAGGGGGTTG TAGATCTATA TATCCATCAC CCCATCCCTG TCTTAGATCT AGGGCTTTCA CAATGTGTAT TTCATTTAGA TCCACTAGTA ACGGCCGCCA GTGTGCTGGA ATTCTGCAGA TATCCATCAC ACTGGCGGCC GCTCGAGCAT GCATCTAGAG GGCCCAATTC GCCCTATAGT GAGTCGTATT ACAATTCACT GGCCGTCGTT TTACAACGTC GTTGACTGGG AAAACCCTGG GGGGGCTGTA AAAGACAACA GCCAAGGTAT AATTGCAAGA CAAAAAACCT CAATATATAA CCACCAGCAA TGATATAAAT TAAACTACAT CCAATAATCG AAAGCACAAC ACAATATAAT CCAATGCAAG TCAAACATCA AACCAAAGGC AAAAAAAGCA ACAACATACA ACAGTACACA ACATCTCACA CACAATCTGA CAACCAACC // ID R25_0_00008 standard; DNA; UNC; 1360 BP. XX AC R25_0_00008 XX DT 3-Jun-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_00008 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001b02.r1; x001b02.f1; XX FH Key Location/Qualifiers FH FT source 1..1360 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_00008_A FT misc_binding 468..501 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00008_1" FT /note="Base quality score is 8.1801e-05" FT misc_binding 501..534 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00008_2" FT /note="Base quality score is 1.6751e-06" FT misc_binding 534..567 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00008_3" FT /note="Base quality score is 2.3108e-04" FT misc_binding 567..600 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00008_4" FT /note="Base quality score is 1.4633e-07" FT misc_binding 600..633 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00008_5" FT /note="Base quality score is 1.5904e-07" FT misc_binding 633..666 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00008_6" FT /note="Base quality score is 6.6453e-08" FT misc_binding 666..699 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00008_7" FT /note="Base quality score is 1.7554e-06" FT misc_binding 699..732 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00008_8" FT /note="Base quality score is 1.1055e-07" XX SQ Sequence 1360 BP; 412 A; 332 C; 269 G; 344 T; 3 other; TCGTGTGCCG GGTGCTTGCT TGGTCGCTTC GTTTCGGTCG ATCTGTGCTG GCGTCCAGTA GCCTGACTGC TTCTTTGTGT TCTGTTTTTG TTCGATTACG CCTCAGCCTA TCTTTCGATT ATTAGTTCCC TCGTTATTCG TTTCTGTTTT CTTTTACTGT CTCGTGTCTG CTATTGTGTC TTCGCTCGGT ATCCAGTTCT CTCCCAACTG CGGCCTATAC TCTGTACCTC TCTGTTACTC TTTTTTTTTG TTTGTGTTTT TTTTTTTGTT TTTGTTTTTT GTTTTTTTTT GTTTTTTGTG TGTTTTCTTG TTTGTTTTGT TTTGTTTTTT TTTTTGGTTG TTTGTCTTGT GTTGTGTTGT TTTTTTATAC AAAAAAAAAA AAAAAGAAAG ACACATGATT ACGCCAAGCT ATTTAGGTGA CACTATAGAA TACTCAAGCT ATGCATCAAG CTTGGTACCG AGCTCGGATC TATCCAATAC GGTGCCTATT GAGGCTTTAG ATCTATCATT GCTGCCACTT TTCGAGGAAA TAGATCTACC CGCCTCGAAA ACGAATTGGG TTGTAGATCT ATCATAGCCG AAATCCCCAA TGAAGCTAGA TCTAACTTAG ACTGCAACCT GAACATCCGT AGATCTAACA TCAAATATTC CGACCCCCCA CCTAGATCTA AGCGGAGCAG GGGTGGCGGC CAGATTAGAT CTAGTAACCT CCGACCTCCA GGACAAATTA GATCCACTAG TAACGGCCGC CAGTGTGCTG GAATTCTGCA GATATCCATC ACACTGGCGG CCGCTCGAGC ATGCATCTAG AGGGCCCAAT TCGCCCTATA GTGAGTCGTA TTACAATTCA CTGGCCGTCG TTTTACAACG TCGGGACCTG GGAAAACCCC GGGNNAGGAG AAGTACGACG AGCCACACAA CAGAGAGCAA GAGAGAAACC AAAAAGAAAG CATCGGACAC GAAGATAGAC AAAGACACAA CAGAAAACAC AACAAAGCAA ACGCAAGAGA GAGAAGAAAA CACACAGACA AGCAGATAGA ACAAACACAG ATCACAAAGT GAAGAGACTA AGGCAGCACA GACCAGAGAG CGCACCAACA ACACAGAAGA CAAAGCACTA AGAATCCAAC AACGCACGAC ACGACAACGA GCACAGAAAG AAACCCCAAA CAACAACAGA GACCAACAAC ACAAGCACAT CAGCCACCGA TAAACCAACA GAGACGACCA CACGCACGAT GACACACCAN ACAACAGAAA CAGCAACGCA CCGACAGCAC CGCACACAGT CGAAACTATA GCTAGGCAAA AGAGCAACTA ACAACATAAG TGACTAACCA CACCACCTAA CAAACACACA // ID R25_0_00009 standard; DNA; UNC; 892 BP. XX AC R25_0_00009 XX DT 3-Jun-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_00009 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001b11.r1; x001b11.f1; XX FH Key Location/Qualifiers FH FT source 1..892 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_00009_A FT misc_binding 100..133 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00009_1" FT /note="Base quality score is 1.9089e-05" FT misc_binding 133..166 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00009_2" FT /note="Base quality score is 1.3715e-06" FT misc_binding 166..199 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00009_3" FT /note="Base quality score is 7.7388e-07" FT misc_binding 199..232 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_00009_4" FT /note="Base quality score is 1.9493e-07" XX SQ Sequence 892 BP; 349 A; 266 C; 106 G; 171 T; 0 other; CGTCACAACA GGAAACAGCT ATGACCATGA TTACGCCAAG CTATTTAGGT GACACTATAG AATACTCAAG CTATGCATCA AGCTTGGTAC CGAGCTCGGA TCTAGTAAGT AACGATGAAC CCGGTGCCAT AGATCTATAC ACTCGCGGCG GGTAGTGAAC GCTAGATCTA CAGTTTAAAC CCCCGCACTC TTCCCTAGAT CTACCCAAGA CTCTCCCTAC ACCCTAATTA GATCCACTAG TAACGGCCGC CAGTGTGCTG GAATTCTGCA GATATCCATC ACACTGGCGG CCGCTCGAGC ATGCATCTAG AGGGCCCAAT TCGCCCTATA GTGAGTCGTA TTACAATTCA CTGGCCGTCG TTTTACAACG TCGTGACTGG GAAAACCCTG GCGATAGTGA AACGGAAAAA CCCAGCAATG ACAGTAGATA CAACACCAAC AGTTATTGAC AGACGAAAAA ACAATACCGT AAAAACAACC ACCACAAACT ATAGATTATC ATATTATAAA CATACAATAT AACAATCCAA ACACACCCAT ATAAATACAA TCACATACAC ACACTCCCCC CAAACCAAAA ACTCAATCCA CTCACCCACA CCCATCAATC TACACTCAAC ACATAACACC ACCATCCATA CAACATCCCA ACACCCCACT CCCCAACACT ACATCACTAT CCACTATATC CAATAACACA TCGCCAATAA GTCATATATT CACTAAACAA CCCAACAACG ATACAAGTAG CAATAACAAC CACAACAACA ACAAAAAATA AAACTATATT AACTTAGTAT ATATATAAAA CATATAAATA CAATACACAC CACACCATAA CACCCAAACA AACAAAAAAA CACAAAACAC AACCAACACC AGACTACTCC AC // ID R25_0_000010 standard; DNA; UNC; 778 BP. XX AC R25_0_000010 XX DT 3-Jun-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_000010 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001b07.r1; x001b07.f1; XX FH Key Location/Qualifiers FH FT source 1..778 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000010_A FT misc_binding 415..448 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000010_1" FT /note="Base quality score is 6.7853e-05" FT misc_binding 448..481 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000010_2" FT /note="Base quality score is 3.0719e-06" FT misc_binding 481..514 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000010_3" FT /note="Base quality score is 6.9799e-07" FT misc_binding 514..547 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000010_4" FT /note="Base quality score is 2.3711e-08" FT misc_binding 547..580 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000010_5" FT /note="Base quality score is 3.1222e-08" FT misc_binding 580..613 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000010_6" FT /note="Base quality score is 7.3151e-08" FT misc_binding 613..646 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000010_7" FT /note="Base quality score is 4.3736e-07" XX SQ Sequence 778 BP; 154 A; 141 C; 217 G; 266 T; 0 other; TTGTTGGGTA TAGTTTTGTC TGTGTCGTTG TTTTGTTTTT GTTTTGGATT TTTATGTGTG TTGGGGTTAG TGGGTTGTGT GTTGTGGTTG GTATATTGTG TGGGCTAGAG ATTTAGTTTG ATGGCTATTT ATTTGGTTTT TGTTGAGTAT TAGTTTTATT TTGGTGATGG TGATATGATT TTATTTTGTT ATACTGGTTT TGGATGCGGG TGTCCGCGTT GTGTTTTGAT GTTTCTGTCT TGTGGTGAGG ACGGTTCGCA TTGTGGCTTG TGATTTTCCT GCGCTGTTCG TGTCTGTGGG GGACCCTCTC GGGACTGTCA CACAGGGAAA CAGCTATGAC CATGATTACG CCAAGCTATT TAGGTGACAC TATAGAATAC TCAAGCTATG CATCAAGCTT GGTACCGAGC TCGGATCTAT TATAGGGAGT AATCATCGGT CTTTTAGATC TATTATTCGC AAGGCGCCGA CCCACCGTAG ATCTATAAGC GGTGAACCAC GAAATTTGGG TAGATCTACG CGTCGTTGAT GGGGTCTACG GACTAGATCT ATGAAGATGC AACCCAGCGT GCGCACTAGA TCTACCGTCG GAGGTTGGCG AATGGCGTTT AGATCTACAA GCAGAGCCAG CCCACCCGGA TATAGATCCA CTAGTAACGG CCGCCAGTGT GCTGGAATTC TGCAGATATC CATCACACTG GCGGCCGCTC GAGCATGCAT CTAGAGGGCC CAATTCGCCC TATAGTGAGT CGTATTACAA TTCACTGGCC GTCGTTTT // ID R25_0_000011 standard; DNA; UNC; 624 BP. XX AC R25_0_000011 XX DT 3-Jun-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_000011 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001b04.r1; x001b04.f1; XX FH Key Location/Qualifiers FH FT source 1..624 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000011_A FT misc_binding 99..132 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000011_1" FT /note="Base quality score is 4.7177e-04" FT misc_binding 132..165 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000011_2" FT /note="Base quality score is 1.9861e-06" FT misc_binding 165..198 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000011_3" FT /note="Base quality score is 1.4351e-07" FT misc_binding 198..231 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000011_4" FT /note="Base quality score is 6.3846e-09" FT misc_binding 231..264 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000011_5" FT /note="Base quality score is 9.8089e-09" FT misc_binding 264..297 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000011_6" FT /note="Base quality score is 2.0081e-09" FT misc_binding 297..330 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000011_7" FT /note="Base quality score is 1.4988e-09" FT misc_binding 330..363 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000011_8" FT /note="Base quality score is 2.7623e-06" FT misc_binding 363..396 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000011_9" FT /note="Base quality score is 2.1585e-09" FT misc_binding 396..429 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000011_10" FT /note="Base quality score is 2.6133e-08" FT misc_binding 429..462 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000011_11" FT /note="Base quality score is 5.2862e-07" XX SQ Sequence 624 BP; 180 A; 151 C; 139 G; 154 T; 0 other; GTTTTAAACC CACGAACACT AGACCATGAT TACGCCAAGC TATTTAGGTG ACACTATAGA ATACTCAAGC TATGCATCAA GCTTGGTACC GAGCTCGGAT CTAGAGATTC TGAAGGTGCG ACATATATTA GATCTAACCC TAACCTATCG CACACAATCG ATAGATCTAG AAGCATCAAA ATGCGCGTTA CCCATAGATC TAGCTTCAGG AACTATCGCT TAGGCTTTAG ATCTAATAGT TTCCGCATGG GGTTGTGGCG TAGATCTATG GACCCGCATA TACTGTGGAT CGGTAGATCT AGAACGGTCT TACGTTTGCG CCATCATAGA TCTAACCTAA TTCGCACTCC CGCAAAAAAT AGATCTAGTT ACGTGGAGAG GGAGAGGGAA GGTAGATCTA ACAACCGTTG TTGTCGAAAT TAACCTAGAT CTACACACCG ACCACGCACC CAGACACATA GATCCACTAG TAACGGCCGC CAGTGTGCTG GAATTCTGCA GATATCCATC ACACTGGCGG CCGCTCGAGC ATGCATCTAG AGGGCCCAAT TCGCCCTATA GTGAGTCGTA TTACAATTCA CTGGCCGTCG TTTTACAACG TCGTGACTGG AAACCTTGGG GGAA // ID R25_0_000012 standard; DNA; UNC; 649 BP. XX AC R25_0_000012 XX DT 3-Jun-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_000012 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001a07.r1; x001a07.f1; XX FH Key Location/Qualifiers FH FT source 1..649 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000012_A FT misc_binding 84..117 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000012_1" FT /note="Base quality score is 6.8188e-05" FT misc_binding 117..150 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000012_2" FT /note="Base quality score is 8.9314e-05" FT misc_binding 150..183 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000012_3" FT /note="Base quality score is 1.0845e-06" FT misc_binding 183..216 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000012_4" FT /note="Base quality score is 6.8996e-08" FT misc_binding 216..249 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000012_5" FT /note="Base quality score is 8.4183e-08" FT misc_binding 249..282 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000012_6" FT /note="Base quality score is 7.8145e-07" FT misc_binding 282..315 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000012_7" FT /note="Base quality score is 1.5298e-06" FT misc_binding 315..348 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000012_8" FT /note="Base quality score is 1.0355e-06" FT misc_binding 348..381 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000012_9" FT /note="Base quality score is 4.6053e-05" FT misc_binding 381..414 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000012_10" FT /note="Base quality score is 3.8096e-07" FT misc_binding 414..447 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000012_11" FT /note="Base quality score is 2.1240e-06" FT misc_binding 447..480 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000012_12" FT /note="Base quality score is 6.2892e-05" XX SQ Sequence 649 BP; 175 A; 164 C; 148 G; 162 T; 0 other; TATGGTGACA CTATAGAATA CTCAAGCTAT GCATCAAGCT TGTACCGAGC TCGTATACAC GCGACTCCCC AGGTCCCCTT TAGATCTACG CGTATAATAA TTCGGACCAA GGCTAGATCT AGGTCGGCTG AGTGAAGACC ACGTGTTAGA TCTACGGATC CCTGCGGACT CCGAGTCACT AGATCTATAT GACTGAGTTT GCCCCACACT TATAGATCTA GAGCATGGCC TGACGAAATA TACGGTAGAT CTAGAGGATA GTCCCAACGT ACGTGCCATA GATCTAACCA ACATAAACCG TAAATCGTCC CTAGATCTAT GCGATACTTA AAGGCCTTTC GTCCTAGATC TAGGCATATA AGGCCTAAGC GAGAGCATAG ATCTAGGACC AGTCATCGGG ATCGGATCTA TAGATCTATT ATCGACCTCC TTCCCCTGCT GCGTAGATCT AACGTGCACC TCTAAAGTAA TTACTATAGA TCCACTAGTA ACGGCCGCCA GTGTGCTGGA ATTCTGCAGA TATCCATCAC ACTGGCGGCC GCTCGAGCAT GCATCTAGAG GGCCCAATTC GCCCTATAGT GAGTCGTATT ACAATTCACT GGGCGTCGTT TTACCACGTC GTGATGGAAC CCTGTGGGGG GGGGATAAA // ID R25_0_000013 standard; DNA; UNC; 1056 BP. XX AC R25_0_000013 XX DT 3-Jun-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_000013 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001c07.r1; x001c07.f1; XX FH Key Location/Qualifiers FH FT source 1..1056 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000013_A FT misc_binding 467..500 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000013_1" FT /note="Base quality score is 1.2642e-02" FT misc_binding 500..533 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000013_2" FT /note="Base quality score is 1.2517e-07" FT misc_binding 533..566 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000013_3" FT /note="Base quality score is 1.2895e-06" FT misc_binding 566..599 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000013_4" FT /note="Base quality score is 1.7380e-06" FT misc_binding 599..632 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000013_5" FT /note="Base quality score is 7.2321e-06" FT misc_binding 632..665 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000013_6" FT /note="Base quality score is 4.6474e-07" FT misc_binding 665..698 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000013_7" FT /note="Base quality score is 3.8274e-07" FT misc_binding 698..731 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000013_8" FT /note="Base quality score is 3.7648e-06" XX SQ Sequence 1056 BP; 221 A; 263 C; 251 G; 321 T; 0 other; GGGTGCTGTC GCGGTCGGTC TACGTGGTTG CTCGTGGTGG GCGCTCGGTG GTGTGCGGAT GTGCCTGTCG CGTGCTTGTG CGCTTCTCTG ATGGTGGATG GTATAGTGTG CTGTGGTGCT TACGTTTCTT GTTCTTCTTC TTCCGGCTTC TCGAGTGATG TGAGTGTATC TTGTTCTCTT GTCTTCTGAG TGCGGTTCTG GTGCTGCCCC GCTTGAGTGT CTAGATTCTT GTCTTTCCTT GTGTGTGTTG GTGTTTTGTG TTTGTTGTGG TTTGTGTCTG TTGTGTGTGG GTGGTGTTTG TGTGTTTTTT TTTCTCAGTG TGTGCTTATG GCGTTGTTTG CCGATGGTGT TTAGTGTGCC CTTGGAGTCC GTCACACAGT AACAGCTATG ACCATGATTA CGCCAAGCTA TTTAGGTGAC ACTATAGAAT ACTCAAGCTA TGCATCAAGC TTGGTACCGA GCTCGGATCT AGACAATTCC CCACATAACA TCGGTGTAGA TCTAATAATT TCGGTCCTTC CAGAGCCACT AGATCTACCA CAATTCCCCG CCGCATCTCC TATAGATCTA ACAGGTGGTT TGGTCTTTGG CGGCATAGAT CTATAGACGT TGATCAAAGC GGTTTTATTA GATCTACAGT CATACTACAC TGCGCCATTC TTAGATCTAT GATGATCACT CCGACATCCT CCGCTAGATC TAATACAAAA TTGCAACCCT CCGTCTATAG ATCCACTAGT AACGGCCGCC AGTGTGCTGG AATTCTGCAG ATATCCATCA CACTGGCGGC CGCTCGAGCA TGCATCTAGA GGGCCCAATT CGCCCTATAG TGAGTCGTAT TACAATTCAC TGGCCGTCGT TTTACAACGT CTGTGCTTGG ACAACCTGGG CGAGTGGTGC GTCGAAGGCC CGCCCCCACT GACCGGTCAG AAATCCCACG TCGTAACCTC GACACCCCTG TCGATACCTA CACAAATAAA ACACCAACAC ACACCAAACA CACCACCAAC AAAGACATTT ACTCAACCCT ATAACGCAAA ACAAACAAAC ACTCAA // ID R25_0_000014 standard; DNA; UNC; 1012 BP. XX AC R25_0_000014 XX DT 3-Jun-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_000014 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001a06.r1; x001a06.f1; XX FH Key Location/Qualifiers FH FT source 1..1012 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000014_A FT misc_binding 214..249 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000014_1" FT /note="Base quality score is 3.1619e-02" FT misc_binding 249..282 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000014_2" FT /note="Base quality score is 5.8204e-06" FT misc_binding 282..315 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000014_3" FT /note="Base quality score is 4.6422e-05" XX SQ Sequence 1012 BP; 344 A; 246 C; 160 G; 260 T; 2 other; ATTTTTTTCT CGTTTGTGTT CTTTGTGTTT GCCTGTCTGC CTTTTCACAC AGGAAACAGC TATGACCATG ATTACGCCAA GCTATTTAGG TGACACTATA GAATACTCAA GCTATGCTTA AAGTCTTGGT ACTCGAGTCT CGTATCTATT CGAGGTCATA AATGTTGGAA AATGTAGATC TAGTCGCCCC TCGAACACCT CGATAGGTGT AAGATCTAGT CGTCCGGTTA AAGAGGTGGT CTGATTAGAT CTAGCCCTAA GTCGTCCCAC CATAAAAATA GATCTACATT AAAATTCAAT AACCGCACGG ATAGATCCAC TAGTAACGGC CGCCAGTGTG CTGGAATTCT GCAGATATCC ATCACACTGG CGGCCGCTCG AGCATGCATC TAAGAGGGCC CAATTCGCCT CTATAGTGAG TCGTATTACA ATTCACTGGC CGTCGTTTTA CAACGTCGTG ACTGGGAAAA CCTCTGGCGA GATTAACAGG AAAAAACCTG TTATGACCAT AATGAAGCAC ACCTATTATA GTTAGACACT ACTGCCAATC CGTACAATCA TCGTGACTAA AAGATATGAA TACCCGTCAT TCGTATATAC ATACATGGAA GAGCAATCCA ATGAAACGGC CTCATCGAGA CGACAATTCC TCGACTTTAG GAGCACATTA TTGATCAGAT GTTAAATCCA AAACACGAAA TAATAGTGAT CATCAAAAAG CATCGTAGAC TAAGTCTGTC ACACCAATAT AACAAAAAGA CAAAACAAAA TACTAACTAC CACTCACAAC CACGTGCAAC AACCAACAAC TGACATCTAC ACCCAACAAC ATAACTAACC TAAACAGAAC ACTAACTAAA TATGAGACAC ACAACAACTA GATACAAAAC TACGTATAAC TACTGAAACA ATATCAACAC ATAAACGACA TAAACATCTA AAGCATATAT TTCTTACTTC CTTCTTCTCC CTCTCTTCCA TCTCCCTCTT TCTTTGTNNA GGAACCACAC AA // ID R25_0_000015 standard; DNA; UNC; 844 BP. XX AC R25_0_000015 XX DT 3-Jun-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_000015 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001h04.r1; x001h04.f1; XX FH Key Location/Qualifiers FH FT source 1..844 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000015_A FT misc_binding 100..133 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000015_1" FT /note="Base quality score is 5.3308e-06" FT misc_binding 133..166 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000015_2" FT /note="Base quality score is 5.7073e-06" FT misc_binding 166..199 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000015_3" FT /note="Base quality score is 3.0386e-07" FT misc_binding 199..232 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000015_4" FT /note="Base quality score is 4.2049e-07" FT misc_binding 232..265 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000015_5" FT /note="Base quality score is 3.9730e-06" XX SQ Sequence 844 BP; 283 A; 230 C; 187 G; 144 T; 0 other; TGTCACCACA GGAAACAGCT ATGACCATGA TTACGCCAAG CTATTTAGGT GACACTATAG AATACTCAAG CTATGCATCA AGCTTGGTAC CGAGCTCGGA TCTAGTCATG GTAGCGGCAT TAGAATAAAT AGATCTATGC CCGTTGGCGC GATCGAAACC ATTAGATCTA GGCCGATGTT CGCGGATGTA CGTTGTAGAT CTACCGGCTA CGAATGATAG TCGGGGGCTA GATCTAAATG TCCTCTCTCC TACCTCATGA ATAGATCCAC TAGTAACGGC CGCCAGTGTG CTGGAATTCT GCAGATATCC ATCACACTGG CGGCCGCTCG AGCATGCATC TAGAGGGCCC AATTCGCCCT ATAGTGAGTC GTATTACAAT TCACTGGCCG TCGTTTTACA ACGTCGTGAC TGGGAAAACC CTGGCGAGCG AAAATGGGAA CACCGTGCTG TAAGTAAAAC GAGGACGCAA CCAGTAATGA CAGACTAACC AACGCAGCCT CTAGTGACCC GGACAAAAAA ATACACAACA AACACACATC AATCACAACA CACAGAGACA CCCACTACAG CCGTGATACC ATAATAGCAT CCAGTCACAA TCCCCCCAAC ACGCAGACCA CAAGCGAGAA AGGGGCCAGA AGAAAGCAAT AGACTACAAA CGACGAGAAT TGATACATGG CGCAGAACAA ACATAAAGAG ATCGCCACGC ACCAGTAAAC AAGACAAGGT CAGCAGAGCC ACAACGCAGC CCACCGCTCC CCCGACGGTG CTAGGCACAA CCGAAGCAAA CACGCAGCGC CAAAAAGACA CACAAGACGG ACGAGATAAT GAAACCAACG GTCA // ID R25_0_000016 standard; DNA; UNC; 825 BP. XX AC R25_0_000016 XX DT 3-Jun-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_000016 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001g11.r1; x001g11.f1; XX FH Key Location/Qualifiers FH FT source 1..825 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000016_A FT misc_binding 65..98 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000016_1" FT /note="Base quality score is 1.0780e-03" FT misc_binding 98..131 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000016_2" FT /note="Base quality score is 9.3649e-06" FT misc_binding 131..164 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000016_3" FT /note="Base quality score is 3.7721e-06" FT misc_binding 164..197 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000016_4" FT /note="Base quality score is 1.4901e-06" FT misc_binding 197..230 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000016_5" FT /note="Base quality score is 1.3464e-04" FT misc_binding 230..263 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000016_6" FT /note="Base quality score is 4.4884e-07" FT misc_binding 263..296 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000016_7" FT /note="Base quality score is 2.5737e-07" FT misc_binding 296..329 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000016_8" FT /note="Base quality score is 3.1253e-07" FT misc_binding 329..363 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000016_9" FT /note="Base quality score is 1.2458e-07" FT misc_binding 363..396 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000016_10" FT /note="Base quality score is 8.4982e-08" FT misc_binding 396..429 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000016_11" FT /note="Base quality score is 3.4582e-05" XX SQ Sequence 825 BP; 248 A; 214 C; 166 G; 195 T; 2 other; CCAAGCTATT TAGGTGACAC TATAGAATAC TCAAGCTATG CATCAAGCTT GGTACCGAGC TCGGATCTAT CTAGGTGTGA GCGAGCCGGA GTATTAGATC TATAAGCCAG CAGCGGTATG CTCGTCGTAG ATCTACCGCC CCAACCTCGA ACTCTCCTCA TAGATCTATT TTCAGGTGCT CGGGTGCTTC TTCTAGATCT AGTACGTGCG CGCACCGTTT GTGTAATAGA TCTAAACCAT AGCGTCCGAG CTGGCGACCT AGATCTAGTT AACCCGCCTG GATGGCGGAT GATAGATCTA CGGCCATGGG GAAGTGGTTT CAATCTAGAT CTACCAACAT TTCGAATTTC CCATTCCCCT AGATCTAGCG TGATCCATGT ATGCTTAGCG TGTAGATCTA CAAAACACCT CTTTACCCAT TACCGTAGAT CCACTAGTAA CGCCGCCAGT GTGCTGGAAT TCTGCAGATA TCCATCACAC TGGCGGCCGC TCGAGCATGC ATCTAGAGGG CCCAATTCGC CCTATAGTGA GTCGTATTAC AATTCACTGG CCGTCGTTTT ACCACGTCTG GGGCTTGGAA ACACCTGGTN TGTTCAGAGA GAAAACCGGT ATAATATAAA GACAACATTA ATAAGAAGCC AAGCAGCTCA ACAGTGAGTC ACTGACAGAA GAAAACAATA AGAGAAGCGC ATAAAACCAC AGCAGACACA AACACAAACA AACAAACCAC TACAATCGAC AAAAAAACTT GAAAACACAT ATCTACAACA ATTATTTTCT GCCCGCTCCC CTGCCCNGTT ATACGAGACA CTACACCTCA CAAAA // ID R25_0_000017 standard; DNA; UNC; 790 BP. XX AC R25_0_000017 XX DT 3-Jun-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_000017 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001g04.r1; x001g04.f1; XX FH Key Location/Qualifiers FH FT source 1..790 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000017_A FT misc_binding 59..95 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000017_1" FT /note="Base quality score is 5.8655e-01" FT misc_binding 95..129 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000017_2" FT /note="Base quality score is 1.5553e-02" FT misc_binding 129..162 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000017_3" FT /note="Base quality score is 4.8267e-02" FT misc_binding 162..196 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000017_4" FT /note="Base quality score is 8.3611e-02" FT misc_binding 196..229 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000017_5" FT /note="Base quality score is 3.3840e-01" FT misc_binding 229..262 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000017_6" FT /note="Base quality score is 6.3096e-01" FT misc_binding 262..295 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000017_7" FT /note="Base quality score is 6.3096e-01" FT misc_binding 295..328 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000017_8" FT /note="Base quality score is 4.5115e-01" FT misc_binding 328..361 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000017_9" FT /note="Base quality score is 1.5667e-02" FT misc_binding 361..394 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000017_10" FT /note="Base quality score is 2.4315e-02" FT misc_binding 394..427 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000017_11" FT /note="Base quality score is 1.3694e-02" FT misc_binding 427..461 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000017_12" FT /note="Base quality score is 4.2027e-01" XX SQ Sequence 790 BP; 236 A; 173 C; 197 G; 183 T; 1 other; CATAAGGTGG GATAGTAGAA TAGTCAAGCT ATGCATTAAT GCTAGGAACT GAGCTCGGAT CAAGCAGAGA GTACAGAATA CTCATCTGTT TTAGATCTAG GGTAACCAAC CGGTGCCCTA CCTGATAGAT CTAAAAGTGG AGCTTCCAAG AACGTCAGTA GATCTAGCAA TGGCGGGCCC GCCGATAATA AATAGATCTA AGTAATATGC CCGGACCTAG CCAGTTAGAT CTAGTGCAGA ATCCAGATCC CACCTGAATA GATCTAAGTA CGAACAGCCG TCAGAATAGC ATAGATCTAC GGGCGACGTG CAGCTCTACA GAGGTAGATC TATTTGTCTG GCCGCGATGA ATTCCGGTAG ATCTAAGTTT TGGTCCGGAT TCGAGAGTAC TAGATCTACG AGTGCTCATA AGGGGTAGGG GGCTAGATCT AGCGTATTTT CCACCGTCCA CCACTTTTAG ATCTAAAGAC ACATGATGCC TGGTGAACTC ACCTTAAAGA TTCTAACGGG GGAGTCACAC GGTGATAACT AGAAGTTAGG ATCCACCTAA GTAACGTGCC GCCAGTAGTA GCTGGAAATT TCTGGCGGAT ATTCCATCAC CATGTGGGGC CGGATCGAAC CATGGATACT AGAAGGGGCC CAAATTCTGG CGCTAATAGG TGAGGTCGGT ATAACACACT TACACTTGGN CCGACAGTAT CAACACACGG TCTGGGATCG GGACAAACCC GTGGGGGATG CTTGAATCAA CGAAACAACT CGTATATCAT CACACATAGA GTAATATCAC // ID R25_0_000018 standard; DNA; UNC; 813 BP. XX AC R25_0_000018 XX DT 3-Jun-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_000018 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001f11.r1; x001f11.f1; XX FH Key Location/Qualifiers FH FT source 1..813 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000018_A FT misc_binding 559..592 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000018_1" FT /note="Base quality score is 7.0642e-05" FT misc_binding 592..625 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000018_2" FT /note="Base quality score is 4.2763e-04" FT misc_binding 625..658 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000018_3" FT /note="Base quality score is 3.8546e-04" FT misc_binding 658..691 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000018_4" FT /note="Base quality score is 2.0670e-04" XX SQ Sequence 813 BP; 182 A; 152 C; 206 G; 273 T; 0 other; ATTAACACAC AAGTTGAGAA TGTTTATTTT TTAGTTATTT TGATATTTGT TGTTGTAGAG ATGTGTTGGT GATGTGGTTT AGTATTGTAT TATGTGGAGA GGAGTTAGTT ATTGTTCTAT TGTTACTTTG GTTTTGTTAT CTGTAGGTTG TTGCGGGGTG ATTATTAGTT GGATGAGTTG GTAGATTGTG ACTAGAGTCT CTTTTCTTGT ATATAGTTGT CACATCATCG TTTTGTTCGG CATCGCGAGA ATGGTGTTGC CTTGCCATGA TCCCTTGAGT AGAATTTATT ATCCTCGTCC AATATCTAGT AGCTATAGAT TGTAACGGCC AAGCGGCGTT ATCATATGTC CTCAGTCTTC GTGTGTTGAG GCGCCCGTTA CTGGTGTTAT GGGTGTGGTT TGCGTGCGTT TTGTTTCGGG GAACTGTGTC GTGCGTTTCT CAGGGATCAC CCGCCGGCGG TTTCACACAG GAAACAGCTA TGACCATGAT TACGCCAAGC TATTTAGGTG ACACTATAGA ATACTCAAGC TATGCATCAA GCTTGGTACC GAGCTCGGAT CTATAATAAA TTCCATTAAC ACATCTCGTA GATCTAGGCC TCGCGGGAAG GCTAAACGTT ATAGATCTAA TGTTCGTCCG GCCTGAATGT AGTGTAGATC TAACGACCCC TAAGGCGTTC TAATACATAG ATCCACTAGT AACGCCGCCA GTGTGCTGGA ATTCTGCAGA TATCCATCAC ACTGCAGCCG CTCGAGCATG CATCTAGAGG GCCAAGTCGC CCATGAGTGT GTCGTAACAG TCCTGCGTGT GCG // ID R25_0_000019 standard; DNA; UNC; 856 BP. XX AC R25_0_000019 XX DT 3-Jun-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_000019 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001f06.r1; x001f06.f1; XX FH Key Location/Qualifiers FH FT source 1..856 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000019_A FT misc_binding 25..58 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000019_1" FT /note="Base quality score is 1.0000e+00" FT misc_binding 58..91 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000019_2" FT /note="Base quality score is 1.0000e+00" FT misc_binding 91..124 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000019_3" FT /note="Base quality score is 1.0000e+00" FT misc_binding 124..157 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000019_4" FT /note="Base quality score is 8.8500e-01" FT misc_binding 157..190 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000019_5" FT /note="Base quality score is 8.3474e-03" FT misc_binding 190..223 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000019_6" FT /note="Base quality score is 1.0326e-03" FT misc_binding 223..256 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000019_7" FT /note="Base quality score is 1.8201e-03" FT misc_binding 256..289 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000019_8" FT /note="Base quality score is 3.2302e-06" XX SQ Sequence 856 BP; 340 A; 190 C; 131 G; 195 T; 0 other; AGGTCGATAG GTGACATATA GAATATCAAG CTATGCTTCA CGCTGGTACC GAGCTCGATC TATCTTGCAA TTATCTCATC ACCTTTGTAG ATCTACCTTG GAAGACATAA TAGACCCTTA TAGATCTACG GTACAAATAT CAATGCCCAC CTGTAGATCT ACATAGCATG TCATGCAGCG GGATTATAGA TCTAGTAACT CTAGGCGTCA CATTTTTAGT AGATCTAGAT ATGAATCTTG ACGTGGCGTG ATTAGATCTA AACTTAGGGG GGCACAACAC GACCATAGAT CTACCATTTC AGATACTGCT TCTAGTTTAC TAGATCCACT AGTAACGGCC GCCAGTGTGC TGGAATTCTG CAGATATCCA TCACACTGGC GGCCGCTCGA GCATGCATCT AGAGGGCCCA ATTCGCCCTA TAGTGAGTCG TATTACAATT CACTGGCCGT CGTTTTACAA CGTCGTGACT TGGAAAACCT GGCGATCGTA CAGAGAAAAA CGTGATGATC ATAAACGGAA ACACACTAGA TTCAACACAG CGAACACACA ATTTTTCATT GACAACAACA CCGAAACGCC CATAGACACA ACGCAAATAA ACACAAGCAT AAATAAATAT CAAAAACTAC AACACACAAC ATCACACGCA ACTAATACTA AATAGTAAAC AACAACAGAA TAATAAGAAA TAACAAAACA CAAAAAAACT CACAAATCTA AAACACAGAC AAAAAAATAT ATAGAAGACA AATAATAATA ACAAACAAAA TAAATACAAC ACAATTAATA GATAAATACT ACTAGATAAT CATATCCATC ATAATCAACA AAATATACAT CAAAGCAACA AAAGAC // ID R25_0_000020 standard; DNA; UNC; 445 BP. XX AC R25_0_000020 XX DT 3-Jun-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_000020 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001f03.r1; x001f03.f1; XX FH Key Location/Qualifiers FH FT source 1..445 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000020_A FT misc_binding 99..132 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000020_1" FT /note="Base quality score is 3.5723e-04" FT misc_binding 132..164 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000020_2" FT /note="Base quality score is 7.4692e-04" FT misc_binding 164..197 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000020_3" FT /note="Base quality score is 3.2920e-06" FT misc_binding 197..230 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000020_4" FT /note="Base quality score is 7.8204e-08" XX SQ Sequence 445 BP; 140 A; 109 C; 98 G; 98 T; 0 other; TTCACCACAG GAAACAGCTA TGACCATGAT TACGCCAAGC TATTTAGGTG ACACTATAGA ATACTCAAGC TATGCATCAA GCTTGGTACC GAGCTCGGAT CTACGGTAAA ATTCATGGAG TACGAAGCTA GATCTATACC GTCTCGATCC CCAACTCACC TAGATCTAAT CTAACTTACC AACCGCATTG GGCTAGATCT ATGGGGTAAA GAGCTCAATG GTAGGTTAGA TCCACTAGTA ACGGCCGCCA GTGTGCTGGA ATTCTGCAGA TATCCATCAC ACTGGCGGCC GCTCGAGCAT GCATCTAGAG GGCCCAATTC GCCCTATAGT GAGTCGTATT ACAATTCACT GGCCGTCGTT TTACAACGTC GTGACTGGGA AAACCCTGGC GACCGAAACG GGAAAAACCA TGAAGAAAAA AAAGGCAAAA ACCTAAGAAA AACTG // ID R25_0_000021 standard; DNA; UNC; 747 BP. XX AC R25_0_000021 XX DT 3-Jun-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_000021 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x011g11.f1; x011c05.f1; XX FH Key Location/Qualifiers FH FT source 1..747 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000021_A, FT and R25_0_000021_B XX SQ Sequence 747 BP; 280 A; 187 C; 105 G; 175 T; 0 other; TAAGGGGGTA CTCGCGGTCA ATGTCTAGAT TCACTATAGG GCGAATAGGG CCCTCTAGCA TCATGCTCGA GCGGCCGCCA GTGTGATGGA TATCTAGCAG AATTCCAGCA CACTGGCGGC CGTTACTATG TGGATCCGAT GCTCGGTACC ACAGCTTGCA TGCATACGCT ATGACGTACT TCTGATCAGT AGTACACCTA ACAATATGCT ATGGCTGTAA ATACATATGT CCATAAGCTA GTATTCCTTG ATGATGAACA AGTGCCGGCG AGTGTTTTCA TCCGCAGCGT CATCGTAGCC GACGCAATGT TATTTATCCA CAGAGTGCAC GGACGTGACA ATGTAGTACT CACAAACATT TCAACCACTC ACACGCATCA ACTACCACAT CACGCACTAC AACAGCATAC CCTAATGTAG CATCCCAATA ATAATACAAG AAATACTACA TAATAATTCG TGACAACACG CGCCTCACTT CCACACAAAA ATAACAAAAC AAAAAAACAA TAAAATAAAT ACAAATATCT CTCCTAATAT TACAACACAA CACTAAACCA TTACAATCAA ATATATGTAT TAATTAATAA ATAACAATAA CTAAGTAGAT CCACTCATAT ACATACATAT ATACAAATAT TAATAATCCT ACAACCACCT ACTACACGAC AACAATCATC TTCCACATAC ACCAACACCA ACTATAACGA TAAACTACAA ATAAGAAAAC AGAACCTAGA ACACATT // ID R25_0_000022 standard; DNA; UNC; 763 BP. XX AC R25_0_000022 XX DT 3-Jun-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_000022 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009h04.f1; x009g04.f1; XX FH Key Location/Qualifiers FH FT source 1..763 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000022_A, FT and R25_0_000022_B FT misc_binding 121..155 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000022_1" FT /note="Base quality score is 1.5535e-02" FT misc_binding 155..188 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000022_2" FT /note="Base quality score is 2.6228e-02" FT misc_binding 188..221 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000022_3" FT /note="Base quality score is 1.5681e-02" FT misc_binding 221..254 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000022_4" FT /note="Base quality score is 2.4488e-03" FT misc_binding 254..287 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000022_5" FT /note="Base quality score is 6.6426e-03" FT misc_binding 287..320 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000022_6" FT /note="Base quality score is 7.6340e-03" FT misc_binding 320..353 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000022_7" FT /note="Base quality score is 1.1703e-02" FT misc_binding 353..386 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000022_8" FT /note="Base quality score is 3.5068e-02" FT misc_binding 386..419 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000022_9" FT /note="Base quality score is 1.5816e-02" FT misc_binding 419..452 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000022_10" FT /note="Base quality score is 2.9545e-02" XX SQ Sequence 763 BP; 208 A; 228 C; 157 G; 170 T; 0 other; AATCAGCAGT GATTGTATCA TATCACTATA GGGCGAATTG GGCCCTCTAG ATGCATGCTC GAGCGGCGCA GTGTGATGGA TATCTGCAGA ATTCCAGCAC ACTGGCGGCG TTACTAGTGG ATCTATAGCT TCTGGTTCAG AAGTCCCTAC CTAGATCTAC CATGGACCGT CACTAGTATG CTATTAGATC TATATTATCT TCCAAGACAA ACCAGGCTAG ATCTACGGTT CATCCCCTCG ATTTTCTTTC TAGATCTACG AGTAGAAGGG CGACATTCAC GCCTAGATCT ATACTTGGTA TGAGGCGTGG CCGGGCTAGA TCTACAACTC CTGGTGGCTT TCTCCACCCT AGATCTAGCA AAACTGCCGC AGTCTAGCAC AATAGATCTA ATTATTCCTC TTCTAATTTA ACCGCTAGAT CTATTGGTTG AGTCTTGTGC ATGGTGTCTA GATCCGAGCT CGGTACCAAG CTTGATGCAT AGCTTGAGTA TTCTATAGTG TCACCTAAAT AGCTTGGCGT AATCATGGTC CATAGCTGTT CCTGGTGGAC AAAGGTCGCC GACCCACCAC GACCACGCAC ACACCAGAAC AGACCCACAC CCCCGCACCC ACGAGCACCC ACCAACAGCT AACACCACCA CCCGCACACC ACACCATGAA CCACGCACGA CCACTAACAA CACCCCGATC GCATGAGCAG CAGCCGGCGA GAACGTCGCA GCGACAGCAG ACAAACCACC CCCAACAGCC CAAACAGCCA AAC // ID R25_0_000023 standard; DNA; UNC; 326 BP. XX AC R25_0_000023 XX DT 3-JUN-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_000023 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001a01.f1; x001a01.r1; XX FH Key Location/Qualifiers FH FT source 1..326 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000023_A XX SQ Sequence 326 BP; 81 A; 69 C; 81 G; 92 T; 3 other; ATAGCTTTTT GCTATTTTGA TCATAGCTGG GTTCTTTCGT GTACCTCGCC AGGGTTTTTC CAGTCACGAC GTTGTAAAAC GACGGCCAGT GAATTGTAAT ACGACTCACT ATAGGGCGAA TTGGGCCCTC TAGATGCATG GCTCGAGCGG CCGCCAGTGT GATGGATATC TGCAGAATTC CAGCACACTG GCGGCGTTAC TAGTGGATCC GAGCTCGGTA CCAAGCTTGA TGCATAGCTT GAGTATTCTA TAGTGTCACC TAAATAGCTT GGCGTAATCA TGGTCATTGC TGTTTCCTGT TGACNNNGAA AACAAAAAAG AAAAGA // ID R25_0_000024 standard; DNA; UNC; 468 BP. XX AC R25_0_000024 XX DT 3-JUN-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_000024 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001a02.f1; x001a02.r1; XX FH Key Location/Qualifiers FH FT source 1..468 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000024_A XX SQ Sequence 468 BP; 102 A; 105 C; 128 G; 133 T; 0 other; GTCGTTGACT GGGATTATCC TGCCCCGTAT TTGTCATTTA CATTTTGGGC GGCCCGGTAT GCGTAGTGTG AATCATAGGC CCTGGGTACC TATGCTATGA TGCAAAAGCC TTGTGGTTGT TCCTATAGGG GTACCCTGAT TTCTTGGCGG TATCATGGTT ATAGCTGTGT CCTGTGTGAA AGGCCCCCCA GGGTTGTTCC AGTCACGACG TTGTAAAACG ACGGCCAGTG AATTGTAATA CGACTCACTA TAGGGCGAAT TGGCCCTCTA GATGCATGGC TCGAGCGGCC GCCAGTGTGA TGGATATCTG CAGAATTCCA GCACACTGGC GGCCGTTACT AGTGGATCCG AGCTCGGTAC CAAGCTTGAT GCATAGCTTG AGTATTCTAT AGTGTCACCT AAATAGCTTG GCGTAATCAT GGTCATAGCT GTTTCCTGTG TGAAAGGGCC GCAAGAATTA ACCCAGTA // ID R25_0_000025 standard; DNA; UNC; 1032 BP. XX AC R25_0_000025 XX DT 3-JUN-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_000025 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001a04.f1; x001a04.r1; XX FH Key Location/Qualifiers FH FT source 1..1032 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000025_A XX SQ Sequence 1032 BP; 182 A; 131 C; 339 G; 380 T; 0 other; TGGTAAAGTG TATTATGTGT ATGTTTATAG TATATGTTTG TTGTTTTGTA GTAGAGCGTT TATGTATGTA GATCTGTTAT TGTATATTTT TGGTTTGTTT TGAGGAGTGG GTAGGTGAGT GGTGTTTGAT GTGTTTGTCT TGTGTTGTTG TGTGTTTTAA AACTATTGAG TAACGAGTGT TGTTTTGTTG TATGAGCTGG TTGTGATGGG TGGTGTTGGG TGTTGGGTGT AGTGTTGTGT TTTAAGACTT GAGAATGAGG GTTTGCTTAT TTGTTCTATT TTGTAGTGTT GTGGTTAGGT GGGGGAGTAG GTGTTGGTGT TTTGTTTGTT TGGTGGGATG GTATGATTAG AGGATGTGGG GTGTGGTAAG GGAGTGGTAG GAGGTGTGGT TCGTTGTGTG TGGTAGTTGT GTGTTTGGTG TGTTATGAGT GGTGTTGAAA TGTGTGTTGA TATTTGTTTC TGTTCATATT GTGGTGTAGG AATGGTCGGA GTGCTAGTGT AGTAGTTTTT GTATATTTGT GGGCTACTGC TCTGGAGTGA TTTAGTGAGC AGTTGGTGAT GCTGATCGTG TGGTGGATAT GGAGTAGGCG CTGCCGTTGT ATTGTCGTGG AGCATGCGGG CTGCTCCGCT ATGTAGTCTG ATGCGTTGGT TTTCCAGGCT TATATGGTCG ATGTGGCATG TAGTTTGTTG CCTTGAGGGT CAGGTCAAAA AGTCGTGGCG CTGATTCGAA GGGCAACACG CGGTTTCCCT GTGAAAATCG CCAGGGTTTT TCCAGTCACG ACGTTGTAAA ACGACGGCCA GTGAATTGTA ATACGACTCA CTATAGGGCG AATTGGGCCC TCTAGATGCA TGGTCGAGCG GCCGCCAGTG TGATGGATAT CTGCAGAATT CCAGCACACT GGCGGCCGTT ACTAGTCGAG CTCGGTACCA AGCTTGATGC ATAGCTTGAG TATTCTATAG TGTCACCTAA ATAGCTTGGC GTAATCATGG TCATAGCTGT TTCCTGTGTG ACCCTCCCCA CGCCCCCCCC CC // ID R25_0_000026 standard; DNA; UNC; 647 BP. XX AC R25_0_000026 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000026 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x006e04.f1; XX FH Key Location/Qualifiers FH FT source 1..647 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000026_A FT misc_binding 116..149 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000026_1" FT /note="Base quality score is 3.6601e-03" FT misc_binding 149..182 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000026_2" FT /note="Base quality score is 1.3449e-04" FT misc_binding 182..215 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000026_3" FT /note="Base quality score is 1.0948e-04" FT misc_binding 215..248 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000026_4" FT /note="Base quality score is 2.0980e-04" FT misc_binding 248..281 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000026_5" FT /note="Base quality score is 9.2762e-03" FT misc_binding 281..314 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000026_6" FT /note="Base quality score is 2.8829e-03" FT misc_binding 314..347 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000026_7" FT /note="Base quality score is 2.1065e-04" FT misc_binding 347..380 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000026_8" FT /note="Base quality score is 9.4662e-05" XX SQ Sequence 647 BP; 143 A; 217 C; 159 G; 127 T; 1 other; AGAGATGTAT ACGATCACTA TAGGGCGAAT TGGGCCCTCT AGATGCATGC TCGAGCGGNC GCCAGTGTGA TGGATATCTG CAGAATTCCA GCACACTGGC GGCCGTTACT AGTGGATCTA TTTGACGACT ATGATCTTAT TCTGGTAGAT CTAGGATCTT AGCTAGGTCA ATAGGATCTA GATCTAGGGA GGGATGCACC TAGGGTTCAT GTAGATCTAG GCCAACCGCC AGAGAAAAAC ACATTAGATC TAACCCTAAC GGTGGTTGTG CCGACTCTAG ATCTATATTG GCAAGCAGAG GTGGAACCTG TAGATCTACC CGGGGTGGGC GAGGTGGTCC TGTTAGATCT AACAGCCCAT TCCCCCTTTA CCGTACCAGA TCCGAGCTCG GTACCAAGCT TGATGCATAG CTTGAGTATT CTATAGTGTC ACCTAAATAG CTTGGCGTAA TCATGGTCAT AGCTGTTTCC GGTTGAAAAA GGGAGGCGAA GCCGCCCACC CCCCAGCCCC GCCAGCACCC CACCGCACAC CCCCGCCCCC CCGGAGCCCG CGCCCGCGGC GCCCCGCGGC CGACGCGCCC CCAGCCCGCC CCCACGCCCC CCCACGCCGC CGACACACCC CCCCCCCCAC CCCCCTCACC CCCCCCC // ID R25_0_000027 standard; DNA; UNC; 639 BP. XX AC R25_0_000027 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000027 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x006f04.f1; XX FH Key Location/Qualifiers FH FT source 1..639 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000027_A FT misc_binding 116..149 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000027_1" FT /note="Base quality score is 5.0516e-04" FT misc_binding 149..182 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000027_2" FT /note="Base quality score is 1.8519e-04" FT misc_binding 182..215 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000027_3" FT /note="Base quality score is 3.0456e-03" FT misc_binding 215..248 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000027_4" FT /note="Base quality score is 1.9315e-04" FT misc_binding 248..281 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000027_5" FT /note="Base quality score is 1.2202e-03" FT misc_binding 281..314 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000027_6" FT /note="Base quality score is 4.1577e-04" FT misc_binding 314..347 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000027_7" FT /note="Base quality score is 3.0849e-04" XX SQ Sequence 639 BP; 158 A; 200 C; 140 G; 141 T; 0 other; AGTGATGTAT ACGACTCACT ATAGGGCGAA TTGGGCCCTC TAGCATGCAT GCTCGACGGC GCCAGTGTGA TGGATATCTG CAGAATTCCA GCACACTGGC GGCCGTTACT AGTGGATCTA GCACTAATTA TTGGATGCGA CGGTTTAGAT CTACCGTCCG AGTTCGGGGG GGGACACATA GATCTATCGT GTCACCTGGT GCAGTCCTCT TTAGATCTAG GAGGGTCGGG CACGATTGAG TTTTTAGATC TAGCGGACTG GTTTTCGTCC TCTTATCTAG ATCTAATAGA AGGCAACTGA ATCAATAGGG TAGATCTATA AAACGACACT AACTTCATGC CACTAGATCT ATAATTTCTG ATGTGCCAAT TGACTTAGAT CCGAGCTCGG TACCAAGCTT GATGCATAGC TTGAGTATTC TATAGTGTCA CCTAAATAGC TTGGCGTAAT CATGGTCATA GCTGTTCCGT GTTGAAAACA GGGCACACCA ACCGACACGC GCCCCCACTT GCGCACCCCA CACACCCCCC CCGCCCCACC GCACCAAGCC GCCCCCCAGA CCCACCACAA CCCCCAGCCC CCCCACCTAC ACGCCGGCGA ACGACACGAC AACGCCCCCC CCCCCCCCCC ACCCACCAA // ID R25_0_000028 standard; DNA; UNC; 671 BP. XX AC R25_0_000028 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000028 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x006f07.f1; XX FH Key Location/Qualifiers FH FT source 1..671 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000028_A FT misc_binding 108..141 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000028_1" FT /note="Base quality score is 6.2939e-02" FT misc_binding 141..174 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000028_2" FT /note="Base quality score is 1.6165e-02" FT misc_binding 174..207 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000028_3" FT /note="Base quality score is 1.8971e-02" FT misc_binding 207..241 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000028_4" FT /note="Base quality score is 4.5492e-02" FT misc_binding 241..274 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000028_5" FT /note="Base quality score is 1.4331e-02" FT misc_binding 274..307 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000028_6" FT /note="Base quality score is 3.1567e-02" FT misc_binding 307..340 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000028_7" FT /note="Base quality score is 4.8984e-02" FT misc_binding 340..373 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000028_8" FT /note="Base quality score is 7.4202e-02" FT misc_binding 373..406 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000028_9" FT /note="Base quality score is 3.3098e-02" FT misc_binding 406..439 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000028_10" FT /note="Base quality score is 3.9631e-02" FT misc_binding 439..472 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000028_11" FT /note="Base quality score is 7.6979e-02" FT misc_binding 472..505 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000028_12" FT /note="Base quality score is 5.6169e-02" XX SQ Sequence 671 BP; 199 A; 161 C; 154 G; 157 T; 0 other; TGTATCAGTA GTCATATACG GCGAGTTGGG CCTCTAGATA CTGCCGTGCG GCGACAGATG TGATGGATAT CTGCGAATTC CAGCACACTG GCGGCCGTTA CTAGTGGATC TAAGACTTGT AAACATCAGA TGCCTACTAG ATCTACTGCG CACTCCACCC ACTGAAAAAT TAGATCTACA TCTGGAGAAG GCCTGCCACC AGTTAGATCT AATCGGGCGT AAGACTCGCA AGCAAGCTAG ATCTAATGAA GGTACGGAGG GCAAGATTCC AAGATCTAGT GGTGATCGAG CGCGTACACT AGTTAGATCT AAACCAGAAC TGGTGATCAT CACGCGTAGA TCTCAGATGT CCTCGCAGTG ATTCCCCGAT AGATCTATAG TGCGAGTAAT GGCATACGCG GTTAGATCTA AGGGCAACCA ACCCAAATAT AGCAGTAGAT CTCACGAACA AGCCGTACAC TACAGGCCTA GATCTAACCA GGAACCGATT GGCAACGATA GTAGATCCGA GCTCGGTACC AAGCTTGATG CCTAGCTAGA GTATTCTATA GTGTCACCTA AATAGCTATG GGGAATCCTG GACATAGCTT ATCCTGTGTA AAACCGGGCG GGTTTCTCCC TATCAAACCG ACTGTTTTCC CCCCAACAAA GATATATATT AACTAAACCA A // ID R25_0_000029 standard; DNA; UNC; 745 BP. XX AC R25_0_000029 XX DT 3-JUN-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_000029 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001a11.f1; x001a11.r1; XX FH Key Location/Qualifiers FH FT source 1..745 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000029_A XX SQ Sequence 745 BP; 160 A; 126 C; 169 G; 288 T; 2 other; AATGAAGTTG GTAGTAGAGA GGATAGATAT TGGTATTAGT GATTGTTTTG TAGTTATTTT TGTTAAACTT GTTATCTTAT GTTGTTGATT GTTGATTGTT TATGTAGTTA CTTGTGGTTA GTTTGTGTCT ATTTTGAATT GTATTTGTTT ATTTAATAGT ATAGGCTTCT TTGTGTGGTT TACTGTTGTT TCGTCTTTCA TGCTAATGAT ATGGTCGTTT GTTGTAGGTG CCTCTTCTTC TGAATTATAT TGTCTTAGGA TCTCCTGCTA TTCTTCTGTT GTTTGTCGTT GAATAGTGCC CATGTATGTG TTTAGTGTTT ACAACAGTCG CTCACGCGTT ACTCATGTTG GAGTACCTAC ATCTGCCGGT TTTATTTCGT TTGTGCATCC ACTCTTATAT TTTTCGTGTG TGTTGCCCCA AATATCTTTT CGCTATATAA TATAAACTGG GTTTTCCCTG TGAAGATCGC CAGGGTTTTC CCAGTCACGA CGTTGTAAAA CGACGGCCAG TGAATTGTAA TACGACTCAC TATAGGGCGA ATTGGGCCCT CTAGATGCAT GCTCGAACGG CCGCCAGTGT GATGGATATC TGCAGAATTC CAGCACACTG GCGGCGTTAC TAGTGGATCC GAGCTCGGTA CCAAGCTTGA TGCATAGCTT GAGTATTCTA TAGTGTCACC TAAATAGCTT GGCGTAATCA TGGTCATAGC TGTTTCCTGT GTGACANNAT AGAACACCAA AGCTA // ID R25_0_000030 standard; DNA; UNC; 582 BP. XX AC R25_0_000030 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000030 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x006g03.f1; XX FH Key Location/Qualifiers FH FT source 1..582 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000030_A FT misc_binding 108..141 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000030_1" FT /note="Base quality score is 5.7061e-04" FT misc_binding 141..174 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000030_2" FT /note="Base quality score is 9.3582e-03" FT misc_binding 174..207 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000030_3" FT /note="Base quality score is 1.2090e-03" FT misc_binding 207..240 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000030_4" FT /note="Base quality score is 2.2066e-03" FT misc_binding 240..273 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000030_5" FT /note="Base quality score is 4.5664e-02" FT misc_binding 273..306 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000030_6" FT /note="Base quality score is 1.9428e-02" FT misc_binding 306..339 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000030_7" FT /note="Base quality score is 1.0011e-02" FT misc_binding 339..372 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000030_8" FT /note="Base quality score is 1.0633e-02" XX SQ Sequence 582 BP; 148 A; 169 C; 114 G; 151 T; 0 other; TGTATAGAGT CACTATAGGG CGAGTTGGGC CCTCTAGACT CATGCCTCGC GGACGCAGTG TGATGGATAT CTGCAGAATT CCAGCACACT GGCGGCGTTA CTAGTGGATC TAATTACATC CATTGAACAT CCAGGCCTAG ATCTACCGCG AGTATCATCG GCGCCCGACC TAGATCTAAC GCAGCTTCAA CCATAGGAGC TTGTAGATCT ATACCTCCTC AGACTACCCC ACGCTCTAGA TCTACTCACG CTCTTCTGAT CATGTGACCA AGATCTACCG ATACAGCTGC CGGCGGTCTT CATAGATCTA AACGGTTTTT ACATTCTCAG TATGCTAGAT CTATCCATCG TTACACTCCC GGCAATCGTA GATCCGAGCT CGGTACCAAG CTTGATGCAT AGCTTGAGTA TTCTATAGTG TCACCTAAAT AGCTTGGCGT AATCATGGTC ATAGCTGTTT CCTGTGTGAA AGTCGCGCGA GGTTACACCC AGTCACCACC GCCAGAATCC CCCATTCATA ACCAGACATA TCCACAACCC CAAGCCACCG CAACTCACAA CTATTCTATT TGTCCATCTC TA // ID R25_0_000031 standard; DNA; UNC; 668 BP. XX AC R25_0_000031 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000031 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x006g07.f1; XX FH Key Location/Qualifiers FH FT source 1..668 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000031_A FT misc_binding 105..138 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000031_1" FT /note="Base quality score is 1.9298e-03" FT misc_binding 138..171 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000031_2" FT /note="Base quality score is 3.5314e-04" FT misc_binding 171..204 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000031_3" FT /note="Base quality score is 2.5980e-04" FT misc_binding 204..237 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000031_4" FT /note="Base quality score is 2.1847e-03" FT misc_binding 237..270 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000031_5" FT /note="Base quality score is 9.2726e-03" FT misc_binding 270..304 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000031_6" FT /note="Base quality score is 2.2673e-03" FT misc_binding 304..337 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000031_7" FT /note="Base quality score is 1.5477e-03" XX SQ Sequence 668 BP; 232 A; 134 C; 167 G; 135 T; 0 other; TGATGTATAC GTTCACTATA GGGCGAATTG GCCTCTAGAT CATGTCACGG CGCAGTGTGA TGGATATCTG CAGAATTCCA GCACACTGGC GGCGTTACTA GTGGATCTAG GAAACGACCT TTCAGAGAAG AAGATAGATC TAAAAGTTAG CGTGGACGTC GGTCGGCTAG ATCTAAAATG GGATGGTCTA TTGAGAACGC TAGATCTATT GAAGTGGCCG TACCCGCTAG GGCTAGATCT ATGTGATACA GACCTTCCGT CACCGCTAGA TCTAAATTTG GTAAACATCC CGATTGCGTG TAGATCTATT GAATGACAGG GGTAGTTGGT ATATAGATCC GAGCTCGGTA CCAAGCTTGA TGCATAGCTT GAGTATTCTA TAGTGTCACC TAAATAGCTT GGCGTAATCA TGGTCATAGC TGTTCCTTGT GTGAAATCGC CGGCGGGGTC CCCGAGATCA GGACGACGAG AGTTGTCCCA CAGTAAGAGC AGAAGGTTAC CCAGCAAGAG GCGAGTCACC CGGCACCAGG AAAGAAAAAC AAGCGAGAAC ACAAAACAAC AAACGGACAA GAACACAACC AAAGAAGAGG ATCCAACAAC AATGCAAAGA CAAAGAACGA ATAAAAGCAA AGCAAAAAAA AAAAAAAAAA ACAACGGAAG AAGAAAAA // ID R25_0_000032 standard; DNA; UNC; 715 BP. XX AC R25_0_000032 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000032 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x012h02.f1; XX FH Key Location/Qualifiers FH FT source 1..715 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000032_A XX SQ Sequence 715 BP; 301 A; 181 C; 89 G; 144 T; 0 other; AATGTCATAG TATCATATAG GGCGAATAGG GCCTCTAGAT ACATTACGAC GCGGCGCAGT AGTAGATAGG ATATCTAGCA GAATACCAGC ACACTGGCGG CCGTAACTAG TAGGATCCGA GCTCGGTACC AAGCTATGAT GCCATAGCAT ATGAGTACTA CTATAAGTAG TCACCTAAAA TATGCTATGG CAGTAATACA TAGGTCATAA GCTAGTTGAC CTAGTGTAGA AAATCGAGCG GGGATGATTA CTCGACTAGA ACATAGCATG GTAGAGGTAT ATACCATCAT TAGTAGAGAA CTAGCTAATA CGACACACAA CTCGCAGAGA AATAAAAATA CAAAAAAATA ATGATCAATA ATAACTCATG ACTAAATAGC ATTCCATCAA CTACAGCATT CCTATCTCCC CAGTACCTGT TTCACTCAAT ACAAAATAAT ACAGCTTCGT ATATAACTAA ACACGATCAC ACACAATCAT CACAACCACA CCCACATAAA CCAAACAACA ACACCACCAA TCTAACTATC CTCCACCCAA CAATCCTCCC TACAATCAAT TAACTATACA CTAAACACCA AAAACAACAA AATCACACAC TACCAACACC CACATCACAC CACCCCACTA ACCAACAAAC ACAATAAAAA AACAACTATA ATCGAAATAC TCTACAAAAC AACATGAACA CAAAATAAAC AATACAAAAC TATAA // ID R25_0_000033 standard; DNA; UNC; 666 BP. XX AC R25_0_000033 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000033 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x012g07.f1; XX FH Key Location/Qualifiers FH FT source 1..666 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000033_A FT misc_binding 114..148 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000033_1" FT /note="Base quality score is 5.3934e-02" FT misc_binding 148..183 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000033_2" FT /note="Base quality score is 7.2049e-02" FT misc_binding 183..217 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000033_3" FT /note="Base quality score is 1.0314e-01" FT misc_binding 217..251 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000033_4" FT /note="Base quality score is 9.8953e-02" FT misc_binding 251..284 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000033_5" FT /note="Base quality score is 7.6267e-02" FT misc_binding 284..318 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000033_6" FT /note="Base quality score is 8.6393e-02" FT misc_binding 318..351 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000033_7" FT /note="Base quality score is 1.2640e-01" FT misc_binding 351..386 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000033_8" FT /note="Base quality score is 1.3295e-01" FT misc_binding 386..421 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000033_9" FT /note="Base quality score is 1.3033e-01" FT misc_binding 421..455 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000033_10" FT /note="Base quality score is 1.2469e-01" FT misc_binding 455..488 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000033_11" FT /note="Base quality score is 6.3071e-02" FT misc_binding 488..521 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000033_12" FT /note="Base quality score is 9.0023e-02" FT misc_binding 521..554 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000033_13" FT /note="Base quality score is 1.9127e-01" XX SQ Sequence 666 BP; 183 A; 155 C; 171 G; 157 T; 0 other; AATTGTATAC GTCTCACTAT AGGGCGAATT GGGCCCTCTA GACTCATGCC GAGCGGCCGC CAGTGTGATG GATATCTGCA GAATTCCAGC ACACTGGCGG CGTATACTAG TGGATCTATA GAACGGGAGG AACAAGAAAC TATGTAGATC TATACTTGCG GATGCGGGTG ATTTATAGCT AGATCTAGGC GGCCGGCTAA CCCCTTGATC TGATAGATCT ACTGCGGGTC CCGCTATATT GCCAGTGTAG ATCTATAGGG GGTTCACAGG GAGGAGGGCG TAGATCTATA CGTCACCTGA AAGCCACTCC TATATAGATC TACTCAAGCT CTCTTGCCTC TCCTACCTAG ATCTAGCGAG GAATGGCTAC AGGCACGATG TTTAGATCTA GCTCTAAAAA CCCAATCGCT TTTCTTTAGA ATCTAAGGCG GGTACTCGTA GATCCGCTCA TTAGATCTAC CGATTGGCAC GAGCACGGTC GTGATAGATC TAGACCCGAG CAACACATTG CGAAAAGTAG ATCTAGTATC TCCGCAAGGT TCTACTGGCA TAGATCTATG GTGAGATTGC TGACTAAACA GCTAGAACGA GCTCGGAACC AGTTGATGCG AAGACTGGGA CTACACAAGA GGCACACAAA AAGCTGGGGG AGCCTCGGCA AACCGA // ID R25_0_000034 standard; DNA; UNC; 663 BP. XX AC R25_0_000034 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000034 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x012g05.f1; XX FH Key Location/Qualifiers FH FT source 1..663 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000034_A FT misc_binding 110..143 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000034_1" FT /note="Base quality score is 2.4265e-02" FT misc_binding 143..176 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000034_2" FT /note="Base quality score is 2.1322e-02" FT misc_binding 176..209 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000034_3" FT /note="Base quality score is 3.1542e-02" FT misc_binding 209..242 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000034_4" FT /note="Base quality score is 5.2778e-02" FT misc_binding 242..275 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000034_5" FT /note="Base quality score is 2.8296e-02" FT misc_binding 275..308 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000034_6" FT /note="Base quality score is 2.6378e-02" FT misc_binding 308..341 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000034_7" FT /note="Base quality score is 6.6247e-03" FT misc_binding 341..374 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000034_8" FT /note="Base quality score is 2.9162e-02" FT misc_binding 374..407 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000034_9" FT /note="Base quality score is 3.1209e-02" FT misc_binding 407..440 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000034_10" FT /note="Base quality score is 7.5162e-02" FT misc_binding 440..474 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000034_11" FT /note="Base quality score is 2.4242e-02" XX SQ Sequence 663 BP; 182 A; 165 C; 162 G; 154 T; 0 other; TGTATACGTC TCACTATAGG GCGAATTGGG CCCTCTAGAA TGCATGCCGA GCGGCCGCAG TGTGATGGAT ATCTGCAGAA TTCCAGCACA CTGGCGGCGT TACTAGTGGA TCTAATACAG ATATTCAGTC AGCGTCCCAT AGATCTATTT GCTGTCGTGT CTTGTAAATT TCTAGATCTA ACGGCGCCGT GATCAACACA ACATATAGAT CTACGATATC GTAGTGCTTT GTTGGTATAA GATCTATGAC ACGGCCGTTG TATGGGCAGC CTAGATCTAG AAGGCCGTGC AAGGGGGCAT CCCTTAGATC TAGACGGGAC CATACCAGCA CTCACCTTAG ATCTACAAGC TTCCGGCGCG TCGTCCGTAA TAGATCTAAT ACCGGGCGGC CCGTCGCAAC AGATAGATCT ACAATTATCG CGACACTACT CGAGCATAGA TCTAAGTGGC GGTGAGGTAA GTCGTAGCTA TAGATCCGAG CTCGGTACCA AGCTTGATGC ATAGCTGGAG TATTCTATAG TGTCCCCTAA ATAGCTGGGG GAAACATGGT CCTAGCTGTT CCCTGTGTAA AACGGCGCGG GGTTCCCCCA ACAACACCGG CAATTTCCAA ACAAAAAACG GTAGAGACCA CCACACACGA AGAAGATAGC ACACACCAAC AGC // ID R25_0_000035 standard; DNA; UNC; 802 BP. XX AC R25_0_000035 XX DT 3-JUN-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_000035 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001c01.f1; x001c01.r1; XX FH Key Location/Qualifiers FH FT source 1..802 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000035_A FT misc_binding 578..611 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000035_1" FT /note="Base quality score is 8.2509e-01" XX SQ Sequence 802 BP; 142 A; 128 C; 230 G; 302 T; 0 other; GTAGGTAGGA GGATGATGGA TGAGGAGGGA GAGAGAGAGA TGGAATGTTA TCTGTTGTTG TTACTATTGA TGTCTTTTTG TGTTCGTTTG ATTTATGCTG TTCTGCTGGT CTTGTCTTTT TCGTCTCTGT TTTTATTTTG CTCGTTGTTG TTGATGTTGT ATTGGTGTTA CTTTGTTTCT TTTGTGTTAT CTCTTTGTTT TTGTTGTGTG ATGGTTTTTT CTGTGTGTGT TGTTGTGTGG TAGTGTGGTT GTGGGTGTGT GTGTTGTGTT TTGTTGGGTT TGGTTGTTTA TCTGTTTGTG TTAGAGGTGG GGTTATTTTT GTGTTGGTGT GTTTTTGTGT TGGCATTATT TGTGGTTGGT TATGTGTGGT ATAATTGGTT GGCGCTGTAG AGGTATACGG GTTTTTTTGG TTACGCTCGC CTGGGTTTTC CCAGTCAGGA CGTTGTAAAA CGACGGCCAG TGAATTGTAA TACGACTCAC TATAGGGCGA ATTGGGCCCT CTAGATGCAT GCTCGAGCGG CCGCCAGTGT GATGGATATC TGCAGAATTC CAGCACACTG GCGGCCGTTA CTAGTGGATC TAGGTGCGCC GAGACCTGTA AATACTTTAG ATCTACACAA TGCTGAGTGA AGCTTGGCCT TAGATCTAAC CTTAGAACAG CCATCGTACC ACGTAGATCT AATCTAGTCA TAACCCACCC GCTAAACTCT AGATCTAGGC ACTCTATGGC GGGGCCCAGC AATAGATCTA CATCTCATGA ATGGGCGCCT CTCCCTGTCC GAGATACGTC CGGGCTGAAG AA // ID R25_0_000036 standard; DNA; UNC; 642 BP. XX AC R25_0_000036 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000036 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x006g08.f1; XX FH Key Location/Qualifiers FH FT source 1..642 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000036_A FT misc_binding 115..148 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000036_1" FT /note="Base quality score is 3.0326e-04" FT misc_binding 148..181 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000036_2" FT /note="Base quality score is 3.5906e-04" FT misc_binding 181..214 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000036_3" FT /note="Base quality score is 1.2485e-04" FT misc_binding 214..247 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000036_4" FT /note="Base quality score is 2.2618e-04" FT misc_binding 247..280 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000036_5" FT /note="Base quality score is 3.0959e-03" FT misc_binding 280..313 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000036_6" FT /note="Base quality score is 2.0656e-03" FT misc_binding 313..346 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000036_7" FT /note="Base quality score is 2.2247e-03" FT misc_binding 346..379 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000036_8" FT /note="Base quality score is 6.9802e-03" FT misc_binding 379..412 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000036_9" FT /note="Base quality score is 1.5723e-02" FT misc_binding 412..445 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000036_10" FT /note="Base quality score is 1.0467e-02" XX SQ Sequence 642 BP; 171 A; 157 C; 153 G; 160 T; 1 other; ATGATTGTAT ACGACTCACT ATAGGGCGAA TTGGGCCCTC TAGATGCATG CTCGAGCGGC GCCAGTGTGA TGGATATCTG CAGAATTCCA GCACACTGGC GGCGTTACTA GTGGATCTAT GCAGCAAGCG TGATCCACCA TCCATAGATC TAAGAAACCG CATCTACTCG TTGAGCGTAG ATCTACGTTG GGGTGGTAGG GGCGGAGCTC TAGATCTAGT GTGTCCTATT CAAACGGGGA TTTTAGATCT ACGTTCGCAA GTTTCAGCCG CCTCTTTAGA TCTATGCGGG TAGGTCTCCG TAAGTCGTTT AGATCTACAT AGAAACCCCC CCTCATTGCC GCTAGATCTA CGGGTGGTAA TAGTGTCGAC AAGGATAGAT CTAATGTTTT AGCAGTCATC TGGCCCTGTA GATCTATAGG ATTGAATTAA CAGCGGGTTG CTAGATCCGA GCTCGGTACC AAGCTTGATG CATAGCTTGA GTATTCTATA GTGTCACCTA AATTGCTTGG NGTAATCATG GTCATAGCTG TTTCCTGTTC AAAACGGCCG CCGGGTACAC ACAGCACAAA GAACGGCAGA GGTACCACAA AACCACAACC TAGGAACACC CCAACACAAC CACATCCAAC CCCATCAACA CA // ID R25_0_000037 standard; DNA; UNC; 1042 BP. XX AC R25_0_000037 XX DT 3-JUN-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_000037 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001c04.f1; x001c04.r1; XX FH Key Location/Qualifiers FH FT source 1..1042 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000037_A XX SQ Sequence 1042 BP; 133 A; 135 C; 258 G; 513 T; 3 other; TTGCTTCTGT TTCTCCTTTA TTTCTCTTTG GTCTTGTGTT TGTGTGGTAT CAGTATTGCT GTCTGCTTCG TGCGTTCTGT TGTTGTGTGT CTGTTTGTCT CCGTTTGTCT GTTTTAGTTC TGTCTCTCTT GTTATTCTGT TGGTGTTGTT CTTCGTTGTG TGACGGTCGC GTCTTGTGTG TTGCGATCTC TCTTGTCTTG TCGTTTTCGT TGCTTAGTGC TGGTGGTCTG TTGTGGTTCT GGCTTTGTTT GTTATTGTTT CTTTGTTCGT GTTTGTTCGT CTGTTTGCTT ATTTTCTTCT CTTCGTCATT GATTTATATT GATTGTGTTT ACTGGTGTTT ATGTGTGATT ATGTGTGAGT TGTTGTTGTG TTTGTTTGTG TGTGTTTATG TATGGTTAGT TGTTTTGCTT GTTGTGTTTG TGTTGTGGTT ATGTGTTAGG TGTGGTTGTG GTGTTATTGT TTTGTATGAT TTGTGTTTTT GTGTTATTGT GATTTAGTTT TGTTTGTTTT TGTTTTTTGT TTGAACATAG ATGGTAGTTT GGTTGTGTTA GTTGATTGTG TGTATTACTA TTGTTTTATG TTTATTTTTG TCTATTTTTG TGTATGTCTT TCGTTGTAGT TTTGTTTGTT TTGTTTTGTT GTTGGTTTGT TATTGTTTTG TTTTGTTGGT GGATGGGTTG TTTTTTTTGA TATTTATTTG TTTGTGTTTC TCTGTTACTA TTATTTTTTT GTTCTTTTGT CCATATGATT CGTCTTACAT CTACTCCCCT CGCCAGGGTT TTCCCAGTCA CGACGTTGTA AAACGACGGC CAGTGAATTG TAATACGACT CACTATAGGG CGAATTGGGC CCTCTAGATG CATGCTCGAG CGGCCGCCAG TGTGATGGAT ATCTGCAGAA TTCCAGCACA CTGGCGGCGT TACTAGTGGA TCCGAGCTCG GTACCAAGCT TGATGCATAG CTTGAGTATT CTATAGTGTC ACCTAAATAG CTTGGCGTAA TCATGGTCAT TGCTGTTTCC TGTGTGAANN NAAAAAAAAA AA // ID R25_0_000037 standard; DNA; UNC; 665 BP. XX AC R25_0_000037 XX DT 3-JUN-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_000037 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001c04.f1; x001c04.r1; XX FH Key Location/Qualifiers FH FT source 1..665 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000037_A XX SQ Sequence 665 BP; 225 A; 157 C; 117 G; 164 T; 2 other; AAACNCCCAG TATTAGGTGA CATATAGTAA TACTCAAGCT ATGCTTCAAT GCTTGGTACC GAGCTCGGAT CTNTATTAAA ACATATTTCT GTCCCACATC CTAGATACTA GGATACCCCT AGCGCCACGA CACATTCTAT AGATCTATGT GCGTGCAGAC CATACAGATA TATAAATCGT AAGATACTAC TCTATGCGCA CTACCAGTTT GCAGTAACCT GCTAATAAGA CTCTAAGAGA GCGCAGTTCC CCAGTTTAAA CTTATATGGG CATACGCATC TTACATTATG GATAATCTCC GATTAGCGCG GAAACCAAGA TAAGAATCTT CAATTACCTT TAAGCGGGGT AGGGCCACAC TTGCATTATT CGGAATCCTA ACCCACAAGT TCCAACACAA AAGCCGGCCG AACCAATAAG AATATCTAGG CCCGGGCAAA TTAAACACAA AGATAGAGGA CCTCCCTTAA GGAATTCTTA TATAAACCAC TCCTTGACAG AGGGAGGGAA AACACCATTG CCCTTGGGAA TCATATATAT CCATCCTTCC TAACAAAAAT TTCAAAAATT GGAATCTTAG AGGACCGGTC CTTAACTAAT GGAATGTAGA TAATTTCCCT TGAAAAAGAT ACGGCAGAAC GGCCTAAGAA TCTATCCCAG CAGAC // ID R25_0_000039 standard; DNA; UNC; 427 BP. XX AC R25_0_000039 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000039 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x006g09.f1; XX FH Key Location/Qualifiers FH FT source 1..427 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000039_A FT misc_binding 118..151 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000039_1" FT /note="Base quality score is 9.3810e-04" FT misc_binding 151..184 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000039_2" FT /note="Base quality score is 5.0288e-04" FT misc_binding 184..217 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000039_3" FT /note="Base quality score is 2.6377e-04" FT misc_binding 217..250 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000039_4" FT /note="Base quality score is 2.0260e-04" FT misc_binding 250..283 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000039_5" FT /note="Base quality score is 2.0809e-03" XX SQ Sequence 427 BP; 102 A; 94 C; 116 G; 114 T; 1 other; CACCCGCTGA TGTATACGAC TCACTATAGG GCGAATGGGC CTCTAGATGC ATGCTCGAGC GGCGCCAGTG TGATGGATAT CTGCAGAATT CCAGCACACT GGCGGCGTTA CTAGTGGATC TACCTACCGG AGTGTGGTCG AAGTTCGTAG ATCTACGTCT AGGTTGACGA GGCGCTGTGA TAGATCTAAC CATCGGTAGC TTCACAAACG TCGTAGATCT ATGTGGGCTC TTAATGTGGT AAATTGTAGA TCTATTAATC GTCTTGGGTA GTTGGTGGTT AGATCCGAGC TCGGTACCAA GCTTGATGCA TAGCTTGAGT ATTCTATAGT GTCACCTAAA TAGCTTGGCG TAATCATGGT CATAGCTGTT TCCCTGTGTN AAAAGCGCGC GAGGATACTC CGAGACAACC AGCAAGGGGA TACCCCC // ID R25_0_000040 standard; DNA; UNC; 818 BP. XX AC R25_0_000040 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000040 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x006g11.f1; XX FH Key Location/Qualifiers FH FT source 1..818 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000040_A FT misc_binding 122..155 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000040_1" FT /note="Base quality score is 1.6643e-03" FT misc_binding 155..188 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000040_2" FT /note="Base quality score is 7.0627e-04" FT misc_binding 188..221 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000040_3" FT /note="Base quality score is 5.4592e-05" FT misc_binding 221..254 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000040_4" FT /note="Base quality score is 9.7431e-05" FT misc_binding 254..287 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000040_5" FT /note="Base quality score is 3.4419e-02" FT misc_binding 287..320 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000040_6" FT /note="Base quality score is 4.4312e-04" XX SQ Sequence 818 BP; 243 A; 185 C; 220 G; 168 T; 2 other; AAAACGAGCA TGATGTATAC GAGTCACTAT AGGGCGAATT GGGCCCTCCT AGATGCATGC TCGACGGCGC AGTGTGATGG ATATCTGCAG AATTCCAGCA CACTGGCGGC GTTACTAGTG GATCTAGTTA ATTGTGATCG GATCGTGGGG TTAGATCTAC GGGATGACGG ACGAGGGTGG GCGCTAGATC TAGACCAACA TAGACATCTG ACAAATTTAG ATCTATCGAG CCATGCTCGT AGAGGTTTAC TAGATCTACG ACTTAGTGTA CCCCCCTGGT CGCTAGATCT AATTTTTGTA GTTCAATCGG TATTGATAGA TCCGAGCTCG GTACCAAGCT TGATGCATAG CTTGAGTATT CTATAGTGTC ACCTAAATAG CTTTGGCGTA ATCATGGTCC TAGCTGTTTT CCTGGGTTGA NNGGCGGGGG TTTTTTCCAC CATGAAAAGA AACCGGGGGT TATACCACAA GAGAAGAAAA GAAAATAGTG TATTAACAAC AAGAGATAAA CAAAAAACAA GTTAAACACA AGAGTGCACA GGACGGGTGA GGAATGCCCT CACGTAGACG CGACGATAAC GATATCGACC GACGACCGCC ACCGGTCACG CGCTAGTAAC GTAATGTGAC AATAGCACGA GAGCTGCAGC ACCTAAGAGG AGCATAGAGA CGACTGCAAC GCGGGCAGCC TGCGAATGCC GCGGACTCCA GACGACACCG ATAGACAACA GCCAGAGATC AGAGCAGTAA GTCACAGGCA CGCACGGAGC TGCACGAACA AGTGCATATA GCAGCACCAG CCCGCGAGAC GGACCGCG // ID R25_0_000041 standard; DNA; UNC; 563 BP. XX AC R25_0_000041 XX DT 3-JUN-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_000041 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001c12.f1; x001c12.r1; XX FH Key Location/Qualifiers FH FT source 1..563 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000041_A XX SQ Sequence 563 BP; 143 A; 73 C; 134 G; 213 T; 0 other; TTGTTAATTT AAGTGTTTAA GTTTGAGTAA TGTTTAGTGT TTGTGTTTAG AGTTATATTT GGTATTATTT TTTTTGTGTA GAGTGAGTAT TTCCAATTGT GTGTTTTATA TTGTATTATA TTATTATTGT TTTTATTTAT GTTTATGTGT AGTATGATAT AATTTTGAGG ATGGAATTTA TAGTGGTGTG TGAATAGTTA GAAATGTTTT TGTATGTAGT GTCTTGGTAG TGTGTTTTCG TGATTGATTT GGCATAGCTG TTTTCTCTGT GGGAAACTCG CCAGGGTTTT CCCAGTCACG ACGTTGTAAA ACGACGGCCA GTGAATTGTA ATACGACTCA CTATAGGGCA GAATTGGGCC CTCTAGATGC ATGCTCGAAC GGCCGCCAGT GTGATGGATA TCTGCAGAAT TCCAGCACAC TGGCGGCTGT TACTAGTCGA GCTCGGTACC AAGCTTGATG CATAGCTTGA GTATTCTATA GTGTCACCTA AATAGCTTGG CGTAATCATG GTCATAGCTG TTTCCTGTGT GAAATCTAAG AGAGCAAAAC AAAAAAAAAC ACA // ID R25_0_000042 standard; DNA; UNC; 1709 BP. XX AC R25_0_000042 XX DT 3-JUN-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_000042 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001d02.f1; x001d02.r1; XX FH Key Location/Qualifiers FH FT source 1..1709 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000042_A XX SQ Sequence 1709 BP; 547 A; 341 C; 299 G; 522 T; 0 other; ATGTATGTTT TTTTGTATAG TGAGTGGTAT AGTTATTTAG TATATTGTGA TGTATTTGAT GATGTGTATT AATATTGAGG TAATGGATTG ATTGCGTTGT TATTTGTAGA TATTGTGTGT TGTGTATTTT TATGGTAGAG TGGCTGTTTG TGTTTGTTTT ATGTATATAT GTATGTATTA TTATTGTATG AGTATGTTTG TGTGTATTTT AGATTGTGTT TATGATTATT ATATGTCTTT TATTATTTTA GCGATGATTT GTCGTGTGTG ATGCTTATGG ATTGTTGTGT GCTTGCTTAG TATTAAGTTG TATTGGGTAT ATCGCGCTGG CTTGGTGCTT CTTTTCTTAT TGTTCTCTGT CTTTGTGTCT GTTCTGTCGT ATTGCTCTCG TGGTCTGGTT GTTTGTGTCT TCTCCTGCTT TCTGGTGTCT CTCTCTCTGT TTGTGGTTCG TTCTGTCTGT CTGGTTGTTC TTCTCTTGCT AGCGGACCCT TGTATAGGTA CAGGTTGGTC CCTGTGTGAC TCATTGTTGT TGCTTCTGTT TCCATTCTTA GATTTGGTCG TTCTTTTGTT TTTGAACTTT TGTTGTTTTG TGGTTGTTAG CTAGTGTGCG TCGCATTTGT TTGTGCTTGT GTGGTGCTGT TTTTTTTCGT GTTTTATGTC GTGGTTTCTG TTGGTATGCC TGTCTTTTTC TTTTTCTCGT TTGGCTGCTC TTTTCTCGTT GCCTGCTGTG GCTCATCGCT GGGTTCCTTC CCGTTATACT CTCGCCAGGG TTTTCCCAGT CACGACGTTG TAAAACGACG GCCAGTGAAT TGTAATACGA CTCACTATAG GGCGAATTGG GCCCTCTAGA TGCATGCTCG AGCGGCCGCC AGTGTGATGG ATATCTGCAG AATTCCAACA CTGGCGGCCG TTACTAGTGG ATCCGAGCTC GGTACCAAGC TTGATGCATA GCTTGAGTAT TCTATAGTGT CACCTAAATA GCTTGGCGTA ATCATGGTCA TAGCTGTTTC CTGTGTGAAA ATGACGCGAG GGACCCCGAA GAAACGACAG CAAGAATCGC CCACTACACG AACGAGCAAG GCTCCGCCCA CACACTAAGA ATACCAAAAA AAACACACAC CGAGCCCAGC AGGAACACCA ACCACCACCA CACATAACAA AACTAATATC GACATATAAC AGAACAAAGA CATAGCAAGA CTACAAAACA TCCAGAACAC CAAATATCAT CCAACCAATA AAAAACAGCA AAATATCAAC TAAATAAAAC ACACCACATA AATCCAAAAA ATAAAAAAAA AACCACACAA CACATACACA ATACAACAAA AAAATACCAC ACATAACGAC ACACACAACA AAAAATAAAA AAAAAAAAAA AAACAAACCA AACATAAATA CAAAAAAAAA AAAAACAAAA AAAACAACCA AAACAAACAA ACACATCAAC ATACAACAAA AACAGAAAGC AAATCAACAA CCAGAACTCC AATAAAACAA ACACAAACAA GACAACATAC TAAACACATA CAATAAACAG AAAAAAACGT CAAACGAACC AAAACACACA TGACTCAAAC AAATAACACA CACATCATTA AATCAGCCAA TTTTCTAACA CTATCCACAC AACTAAACAA CACAAACATA AATTCAATAC AAACTTACAC TCACACCGAA AAAAGCAACC AAAAACCAAC AACAAAAAA // ID R25_0_000043 standard; DNA; UNC; 746 BP. XX AC R25_0_000043 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000043 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x006h02.f1; XX FH Key Location/Qualifiers FH FT source 1..746 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000043_A FT misc_binding 102..135 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000043_1" FT /note="Base quality score is 6.8985e-02" FT misc_binding 135..168 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000043_2" FT /note="Base quality score is 6.1076e-02" FT misc_binding 168..201 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000043_3" FT /note="Base quality score is 4.2519e-02" FT misc_binding 201..234 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000043_4" FT /note="Base quality score is 4.1300e-02" FT misc_binding 234..267 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000043_5" FT /note="Base quality score is 4.3346e-02" FT misc_binding 267..300 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000043_6" FT /note="Base quality score is 9.5839e-02" XX SQ Sequence 746 BP; 269 A; 199 C; 101 G; 177 T; 0 other; TAAGATCATA TAGGGCGAAT TGGGCCCTCT AGATGCATGC TCGAGCGCGC AGTGTGATGG ATATCTGCAG AATTCCAGCA CACTGGCGGC CGTACTAGTG GATCTAATTA TACAAACCTG TCCTCTGCGT CTAGATCTAA TAGACCTGTC TGACCCATCA CATCTAGATC TACCTAGTAA CCAACCCCAA ACTACTTTAG ATCTAACCCA GACATAGCCC ACGGGATATG TAGATCTAGC GTATTAGGGA ACTTTGCAGT ATATAGATCT ACGTTGCGGA AGGGGTATAT GGGCGATAGA TCCGAGCTCG GTACCAAGCT TGATGCATAG CTTGAGTAAT TCTATAGTGT CACCTAAATA GCTTGGCGTA ATCCTAGTCA TAGCTATTTC CTGTGTGAAA CACCCGACAG TATTCCCCAA CTATCCCTCC CCACAATATT ACAACAACTC ACAAACTCCA ATAATATCAA CCACTCATAA ATGACATACA ATTAAGACTA ATTAATAAAC AAAACAAATA AACACACATC ATTATCCACA AAACCATACA TATACAATAA ACCCACATAC ACACCTCCCA ATAACAAATT CATCATCTCA ACTCCACACT TCAACACATC ACAAACAAAA CAAGACCACA TCTTCCAAAT ACCACAACCA TTACGCTAAA AATACTAAAC GCTACCACCT CTAGATCTCT TCACAACATA ATACATGATC CAAAACTAAT AATGACGAAA ACACAT // ID R25_0_000044 standard; DNA; UNC; 813 BP. XX AC R25_0_000044 XX DT 3-JUN-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_000044 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001d07.f1; x001d07.r1; XX FH Key Location/Qualifiers FH FT source 1..813 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000044_A XX SQ Sequence 813 BP; 94 A; 119 C; 164 G; 435 T; 1 other; TTTCCTTTCT TTTCGTTGGT TTTCTTTTCT TGTGTGTTTT TTGTTTATCT TTTTTTTCTT CTATTTCGCT TGTTGGTCCG TCGTGTCCTC TGCTTCCTGT TACTTCTTCT TCTGTTTTCT CTCTGTTTTT TCCGCTTCCG TTTTCTTTTC GTTTCTGGTT GTTTTCTTTG TCTTTCATGT TTGTTTTTGT TTTTTATTGT TTTTGTTTGT TTTTGGTTTT TGTGTTTTTT TTGTTTTGTT TTTGTTTTTT TTTTTTTTTT TTTTTTTTTT ATTTTTGTTT TGTGTTTTGT GTTTTTTGTG TTTTTTGTTT ATGTTTTGTT TTTGTGTTAT ATGAAGTTAG TTTTGTTTTT TTATTTGTTT GTTTGTTGTT GTCATTTTTT TTTTTTTTTG TGTTGTTTTT TTTGTTTGGT TGTGTGTGTG CATGTGTTTT TTTTCTGTTT TGTTTGTTTT TTTTTGTTGT TTTTTGTTGT CTTGGTGGTG CTTATTGTTG TGCTGCTCTT CTACTTACTG TGTTCTGCTT CCTATTCTCC TCTCGCCAGG GTTTTCCCAG TCACGACGTT GTAAAACGAC GGCCAGTGAA TTGTAATACG ACTCACTATA GGGCGAATTG GGCCCTCTAG ATGCATGCTC GAGCGGCCGC CAGTGTGATG ATATCTGCAG AATTCCAGCA CACTGGCGGC GTTACTAGTG GATCCGAGCT CGGTACCAAG CTTGATGCAT AGCTTGAGTA TTCTATAGTG TCACCTAAAT AGCTTGGCGT AATCATGGTC ATAGCTGTTT CCTGTGTGAA CNTAAAGAAA AAAGAAGAGA AGC // ID R25_0_000045 standard; DNA; UNC; 987 BP. XX AC R25_0_000045 XX DT 3-JUN-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_000045 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001e01.f1; x001e01.r1; XX FH Key Location/Qualifiers FH FT source 1..987 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000045_A XX SQ Sequence 987 BP; 148 A; 97 C; 195 G; 545 T; 2 other; TTTTTGGTGT TCTTATTTGT TTTGATTTTT TTGTTATTTT TTTTATTTGT GTATGTGGTT TGTTTTTTAT TTTTTTTTAT TTTTTTTTTT TTTTTTTTTT GTTATTTGTG ATATGACATT TTTGTTTGTT TTTCTTCTGT TTTATGTTGC GTATTGTTTT AGTATGTCTT GTGGTTTATT TTGTGTTTTT TTTGGTCAAG TTCTCTGCTT TATGGTGTTT TGTTTTTTAT GGTCTAGTGA TGTTTTCTTC TTTCTTGTTT TTTTAATTTA TGTTTTGTGT TGTTTTGTTT TTTTTTTTTT ATTGTATTGT ATTATTTTTA TTTTGTTTAT TTTCTTTTTT TTTGTTTTTG TGTAGTTCGT GTTTTTTTGT TATATTTCTA GTTGTGTATG TTGTATTTGT ATATTTTGTT ATTTTATTTT GTTTGTATCT TTTGTGGTTG ATGTTTGTGG TGTTTGTAGT TTGTGTTTTG TGTTTGTTTT TTGTTGATTG TTTATTTTAT ATTTTGTTTT TGTTTATGTT TTTTTATTTT TTTTTAGTGT GTAGTTGTGT TGTGTTTGTG TATATTTTTT TTTTTTCATT TTTTGTTTAT TTGTTTCGTG TGTGTTATAT GTATTTGGTG ATTGTTTTTT ATGAATGTTG TTTGTTGGGT TTGATTTTTA TTATTTGTTT GTAGCTCTAT CATATACTCT CTCTCGCTCA GTGGTTTGTC CCTAGTCACA GACGCTTGTA AAATCGACGG CCTAGTGAAG TTGTAATACA GACTCACTAG TAAGGGCGAA GTTGGGCCCG TCTAGATGCA TGGCTCGAAC GGCCGCCAGT GTGATGGATA TCTGCAGAAT TCCAGCACAC TGGCGGCGTT ACTAGTCGAG CTCGGTACCA AGCTTGATGC ATAGCTTGAG TATTCTATAG TGTCACCTAA ATAGCTTGGC GTAATCATGG TCATAGCTGT TTCCTGTGTG ACNANCCACA CCCCACAAAA ACAGAAA // ID R25_0_000046 standard; DNA; UNC; 826 BP. XX AC R25_0_000046 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000046 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007a05.f1; XX FH Key Location/Qualifiers FH FT source 1..826 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000046_A FT misc_binding 120..154 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000046_1" FT /note="Base quality score is 3.4137e-02" FT misc_binding 154..187 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000046_2" FT /note="Base quality score is 6.3752e-04" FT misc_binding 187..220 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000046_3" FT /note="Base quality score is 1.5271e-04" FT misc_binding 220..253 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000046_4" FT /note="Base quality score is 1.6536e-04" FT misc_binding 253..286 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000046_5" FT /note="Base quality score is 2.8098e-04" FT misc_binding 286..319 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000046_6" FT /note="Base quality score is 3.4277e-03" FT misc_binding 319..352 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000046_7" FT /note="Base quality score is 3.2853e-03" FT misc_binding 352..385 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000046_8" FT /note="Base quality score is 2.1828e-03" FT misc_binding 385..418 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000046_9" FT /note="Base quality score is 3.7764e-04" XX SQ Sequence 826 BP; 254 A; 217 C; 199 G; 154 T; 2 other; CACATGAATG TATACGACTC ACTATAGGGC GAATTGGGCC CTCTAGNATG CATGCTCGAG CGGCGCCAGT GTGATGGATA TCTGCAGAAT TCCAGCACAC TGGCGGCCGT TACTAGTGGA TCTACTGACT ACCATAAATT AAACTTCTTT AGCATCTAAA GGTTGCCTCG GCGATAGGAA CGGTAGATCT ACAGGGCGGG CCCGGTGTTT GGATGTTAGA TCTAGCCCGA CGACAACGCG GTCCCCCGGT AGATCTAGGG AACAGGGCGT GGCAGTCGCT TTTAGATCTA GGCTTGTTCG GGTCGTCGCC ACCCGTAGAT CTAAGCGGTA TTCTCGGCAG TTGTTTGCTA GATCTAGCAG GGTTTCTGAT AAGGTCTGGA CTAGATCTAA TTGGGTGTAC AGAGGAGTTT GGAATAGATC CGAGCTCGGT ACCAAGCTTG ATGCATAGCT TGAGTATTCT ATAGTGTCAC CTAAATAGCT TGGCGTAATC CTGGTCCTAG CTCGTTCCCG TGTGAAAAAG GNCATCGAAA AACATAGAAA AGCAATTAAG GGGCGGGAAC AATAAAGGGC ACACACAGGC GTAGCCAAAA GAGGAGCCAC TCCATAAATG CGTGGCCACC GCCGACTCCA CAGGAAACGT GCGACGGAAC CCGCGAGGCA AAGAATAACA TAAAACAGAC GCACAACCAA CACACACACA GACACTCAAA AATCACAACA AGACACAGGA AAACAACACA CAAACCACCA ACAAACACGC CAGCAGCAGC ACGACCACAC ACCAAGCCAC ACCACACCAC GACCACAACC ACCACACAGA CACACC // ID R25_0_000047 standard; DNA; UNC; 752 BP. XX AC R25_0_000047 XX DT 3-JUN-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_000047 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001e05.f1; x001e05.r1; XX FH Key Location/Qualifiers FH FT source 1..752 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000047_A FT misc_binding 258..291 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000047_1" FT /note="Base quality score is 5.9789e-01" FT misc_binding 291..324 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000047_2" FT /note="Base quality score is 5.5707e-01" FT misc_binding 324..357 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000047_3" FT /note="Base quality score is 1.1302e-02" FT misc_binding 357..390 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000047_4" FT /note="Base quality score is 1.4110e-03" FT misc_binding 390..423 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000047_5" FT /note="Base quality score is 1.1009e-03" FT misc_binding 423..456 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000047_6" FT /note="Base quality score is 5.6729e-03" FT misc_binding 456..489 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000047_7" FT /note="Base quality score is 6.5161e-04" FT misc_binding 489..522 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000047_8" FT /note="Base quality score is 1.6169e-04" FT misc_binding 522..555 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000047_9" FT /note="Base quality score is 5.3138e-04" FT misc_binding 555..588 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000047_10" FT /note="Base quality score is 3.4749e-04" FT misc_binding 588..621 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000047_11" FT /note="Base quality score is 1.3964e-04" FT misc_binding 621..654 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000047_12" FT /note="Base quality score is 3.9550e-03" FT misc_binding 654..687 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000047_13" FT /note="Base quality score is 4.7125e-01" XX SQ Sequence 752 BP; 183 A; 138 C; 202 G; 229 T; 0 other; TTGTGAGTAC GTTACTTTGT CTTGTGGTGT TTGATGTAGC TTCGCTGGGT GGTGTGGCTT GTTGTGGTGA GTATGCTTTT GTGTTGCGTT TCTTTTTTAT GAGTGATATG ACAGAGTTGC ACCAGGACGT GTGTACGTCG GCCAGGTATT GTTATTCGGA CTCATATTAG GCGAATTGGG CTCTCTGATG CATGCTGGAT CGCCGCCAGT TTATGAAATC TGCAGAATTC CAGCACACTG GCGGCCGTTA CTAGTGGATC TATAGGTTCG ACCAATCTGA TTAGGATTAG AATTAGGTAG TAGAAGGTTG GGATACGATA TAGATCTACA CAATTTACCC GCCGGTAGCA TAATAGATCT AGTTGGTGGG TCCGGAGTAG CTAATATAGA TCTATTCCGA CTCTTAGGTA CATCGCCCCT AGATCTAGCG AGAAGCGGGA GCAAGGAACA TCTAGATCTG TCCGATGGAT CGTCGCCGTC AGAGCTAGAT CTAGGGTTTC GATAGTGATT TTCGCGATTA GATCTACACG ACGATACCCC CCATCGAAAA CTAGATCTAC GGCTGAGGTG CTGGGATGCG AGAATAGATC TAGACGTAAT AACGGTTTTG CCTTCGTTAG ATCTAGGTAT GACAGTAACA TATGTAGATA TAGATCTAGA GCTTCAAGTT CTGTAGCGAG AGTTAGATCC GAGCTCGGGT ACCAAGCTTG AATGCATAGC TTGAGTATTC TATAGTGTCA CCATATGCTG AT // ID R25_0_000048 standard; DNA; UNC; 992 BP. XX AC R25_0_000048 XX DT 3-JUN-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_000048 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001e08.f1; x001e08.r1; XX FH Key Location/Qualifiers FH FT source 1..992 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000048_A XX SQ Sequence 992 BP; 208 A; 96 C; 302 G; 386 T; 0 other; GTGGTGTGAG TGGTGTAGTG TTTGTTGTTT TAGAGTAGCA GGGTATGTTT TTTCTTTTTT GTGGTAGATT TTTTGTCTTG GTTGTAAGTG TTATAGCTGT TGGTGTTATT TGTGTGTTAG CGGTGTTATA TCATTGTATA TTGGATGGTG GATGTTTTGT GTATGTATGT GTGTATTTAT TGTTTTGTGA TGAAGTTGGG GATGTGTTGA GGTTGGTTGT TGTATATGTT AGTTTGTGCT ATTGATGGAC GAGTATCGGC GTTGTATAGT GTAGTATGCA TGTTATTATG TTCTTGTATT TGTTTGTGTT GTGTTTGTTG TGTGTTTGGA GTGATGGTAG TGTGTTGATT TGAGGTTTGT ATTGTAACGT AGTTTGTTTA TTATATATGA TGTATGTTGA GTTGTAGATA GATGTGATAA GTAGTATTAG TTTGACGTTA TTGTATTTGT TTTAATATTT GTTAGAGGAA GAGGTGATAG AGAATGAAGA TGGAGAGGTG TATTTGGTGT TGATTTAATA TTTGGTTAGT GTGTGTCGAG ATATGGTGTG GAGTTGAATA GTTATACAGT AACAGTGGGT GGTGGTGAGG TTTAGATATA GTTGATTGGT GTTAGTGTGT ATTGTAGTAA TGATGTAAGT AGTTAGGAGT GTCCTGATGC AATATGCGTT GGGGGATGAT TGGTCATAAC AGGTGCCTCT CTGATAAGCT CGCCACGGGT TTTCCCAGTC ACGACGTTGT AAAACGACGG CCAGTGAATT GTAATACGAC TCACTATAGG GCGAATTGGG CCCTCTAGAT GCATGCTCGA GCGGCCGCCA GTGTGATGGA TATCTGCAGA ATTCCAGCAC ACTGGCGGCC GTTACTAGTG GATCTACTTA AGCGGGCCGG GCGTGGTGAC CTAGATCCGA GCTCGGTACC AAGCTTGATG CATAGCTTGA GTATTCTATA GTGTCACCTA AATAGCTTGG CGTAATCATG GTCATAGCTG TT // ID R25_0_000049 standard; DNA; UNC; 308 BP. XX AC R25_0_000049 XX DT 3-JUN-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_000049 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001e10.f1; x001e10.r1; XX FH Key Location/Qualifiers FH FT source 1..308 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000049_A XX SQ Sequence 308 BP; 80 A; 73 C; 70 G; 85 T; 0 other; TTTTCTGTTT TCTGTTTGTG AATCTCACCA GGGTTTTCCC AGTCACGACA TTGTTAAACG ACGGCCAGTG AATTGTAATA CGACTCACTA TAGGGCGAAT TGGGCCCTCT AGATGCATGC TCAGACAGCC AGCCAGTGTG ATGGATATCT GCAGAATTCC AGCACACTGG CGGCGTTACT AGTGGATCCG AGCGGTACCA AGCTTGATGC ATAGCTTGAG TATTCTATAG TGTCACCTAA ATAGCTTGGC GTAATCATGG TCATAGCTGT TTCCTGTGTG AACTCCAAAA ACACACAAAA CCAGCCCA // ID R25_0_000050 standard; DNA; UNC; 867 BP. XX AC R25_0_000050 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000050 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007b06.f1; XX FH Key Location/Qualifiers FH FT source 1..867 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000050_A FT misc_binding 127..160 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000050_1" FT /note="Base quality score is 3.8106e-04" FT misc_binding 160..193 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000050_2" FT /note="Base quality score is 6.6375e-04" FT misc_binding 193..226 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000050_3" FT /note="Base quality score is 6.4727e-03" FT misc_binding 226..259 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000050_4" FT /note="Base quality score is 2.0769e-03" FT misc_binding 259..292 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000050_5" FT /note="Base quality score is 3.4454e-04" FT misc_binding 292..325 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000050_6" FT /note="Base quality score is 2.0044e-03" FT misc_binding 325..358 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000050_7" FT /note="Base quality score is 4.9660e-04" FT misc_binding 358..391 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000050_8" FT /note="Base quality score is 4.7805e-03" XX SQ Sequence 867 BP; 337 A; 236 C; 150 G; 142 T; 2 other; GGGAAATAAG CAGTGAATGT ATACGATTCA CTATAGGGCG AATTGGGCCC TCTAGATGCA TGCTCGAGCG GCGCCAGTGT GATGGATATC TGCAGAATTC CAGCACACTG GCGGCGTTAC TAGTGGATCT ATTACCCCTC ACATACTCCT GTCTATTAGA TCTACAGTGT ACATCCTTCC ACCGCCCCCT AGATCTAAAT TATGTCAACC GCCGGCGGCC GGTAGATCTA TCAAAGGTGT ATGTGCTCGC GTACCTAGAT CTAAAAACCC TCGATCACTC ATAGAATGTA GATCTAAGAG TTATCATATA CCGAACTGCC GTAGATCTAA GCAAACGGCC CTATCATATA TTTGTAGATC TAGATTAGGA AACAACAGGA CATATATTAG ATCCGAGCTC GGTACCAAGC TTGATGCATA GCTTGAGTAT TCTATAGTGT CACCTAAATA GCTTGGCGTA ATCATGGTCC TAGCTGTTTC CTTGTTTGTA AACGNNATAA CCAACAACCA CAAAAAAACA GAAATCACAA CCACGAAACA CAACGACACA GCAGAAGAAA ACACAGACCA CACAAACACA GACCCACAAC CAACCAACAC AACAAAACAA CAGAGAGAAC CGAAATCCAA AAGAAAAACA ACACAACACA AAAAACAAGA ACACACGGAA GACACAAACC ACAACGAGAG GCAAAAACAC ATGAAAGAAC AGACAAAACA CAAACCAACG CACAAAAACC GAGACGCACA CACACACACA ACAGACAGCA AACAACAGCA CCAGAGACAA GGCCCACAAG ACCCGAACAG CTACACAACA GAACACCCCA GCAAGCCAAC TACGACACGC AACACAACAC CAAAGCC // ID R25_0_000051 standard; DNA; UNC; 970 BP. XX AC R25_0_000051 XX DT 3-JUN-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_000051 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001f01.f1; x001f01.r1; XX FH Key Location/Qualifiers FH FT source 1..970 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000051_A XX SQ Sequence 970 BP; 103 A; 204 C; 136 G; 526 T; 1 other; CCGTTCTCTT TTTCTTTCCT CTTTTGGCTT TTGTCATCTC TCTCTACTTT TTGCTTGCTT CCTTCTCTTC TTTTTTTTCC TTTCTCTTCT TCTTTCTTTA TCTGTTCTCT CCTCTACGTC GTTGTTCTAT TGCTTTCTGT TTTGCTTCTT TCTTTCTCTT GCCTTTTTCT CTTCTCTCCG CTCCTTGTCC TTCTTCTGAT CGTTGGTTTT TCTTCTTTCT CTTTTCGTCT TTTTTTCTTC TCTCTTCTTC TTTTGTTCTT TGTAGTTCTT TCGGCTGTCT TCTCTGCTCT TTTCGTGTGC GTGTTTGTTT TTCTTTCTTG TGCGATTCTT CTTTTCTCTT TCCTTCTTTC TTTTACCTTT CCTGTTTCTC TTTTCTCTTT TCTTCTGCTA CTTCCGTCAT TTATTTCTTT TCTGTTCTTC GTTGTCTCTT TGTTTATCGT GTTTTCGCTC CTTTGTGCAT TTCTTTCTTA GTTCTCTGTT CTTGTTTTTT GTTATGTTTT TTTTTTTTGT TTTTTGTTTT TTTTTTTTTT TTCTTTTTTT TGTTTTTTTT TTTGTTTTTT TTTGTTTTAC TTTTTTTTTT TTTTTTTTGT TTTTTTTTTT TTTTTTTTTT TTTTTTGTTT GTGTTTTTAT GTATTTCTTT TTTTGTGTTT TCTTTTTATT CTTTGTTCTG ACTCTATCCT TACTCTTCTC TCGCCAGGGT TTTCCCAGTC ACGACGTTGT AAAACGACGG CCAGTGAATT GTAATACGAC TCACTATAGG GCGAATTGGG CCCTCTAGAT GCATGCTCGA GCGCCGCCAG TGTGATGGAT ATCTGCAGAA TTCCAGCACA CTGGCGGCCG TTACTAGTGG ATCCGAGCTC GGTACCAAGC TTGACATAGC TTGAGTATTC TATAGTGTCA CCTAAATAGC TTGGCGTAAT CATGGTCATA GCTGTTTCCT GTGTGAACNA AACAAAAAAA GAAAAAAAAA // ID R25_0_000052 standard; DNA; UNC; 637 BP. XX AC R25_0_000052 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000052 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007c01.f1; XX FH Key Location/Qualifiers FH FT source 1..637 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000052_A FT misc_binding 94..127 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000052_1" FT /note="Base quality score is 1.2678e-03" FT misc_binding 127..160 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000052_2" FT /note="Base quality score is 4.7020e-04" FT misc_binding 160..193 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000052_3" FT /note="Base quality score is 4.6138e-04" FT misc_binding 193..226 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000052_4" FT /note="Base quality score is 1.3117e-04" FT misc_binding 226..259 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000052_5" FT /note="Base quality score is 2.1107e-04" FT misc_binding 259..292 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000052_6" FT /note="Base quality score is 6.7527e-04" FT misc_binding 292..325 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000052_7" FT /note="Base quality score is 2.1617e-03" FT misc_binding 325..358 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000052_8" FT /note="Base quality score is 2.2713e-03" FT misc_binding 358..391 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000052_9" FT /note="Base quality score is 9.5206e-05" FT misc_binding 391..424 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000052_10" FT /note="Base quality score is 2.8107e-04" FT misc_binding 424..457 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000052_11" FT /note="Base quality score is 5.5222e-04" FT misc_binding 457..490 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000052_12" FT /note="Base quality score is 3.1058e-02" FT misc_binding 490..523 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000052_13" FT /note="Base quality score is 1.2977e-02" XX SQ Sequence 637 BP; 155 A; 171 C; 145 G; 164 T; 2 other; TAGGGCGAAT TGGGCCTCCT AGAGTAANTG CTCGACGGCG CCAGTGTGAT GGATATCTGC AGAATTCCAG CACACTGGCG GCGTTACTAG TGGATCTAAT GGGATACGGG GCGGGCGGGT GCGTAGATCT AGCTCGAATG CACACAGACG TTTTCTTAGA TCTAGCTGAG GTTTCCCCCA TCGCTCCTGT AGATCTACTC TTCCCCCCAA GTCTCAACCC GATAGATCTA CAGACGCCTC CCCCCACTTG TTGAATAGAT CTAACTTGCA AGGCCAATCA GAACTGCCTA GATCTATCGG ATTAGTTCTA CCTGCCCAGG TTAGATCTAA GCCCCCCAGA TACCCTCTTG CACGTAGATC TACGTATGAC CCTGTCGATA ATCGGGGTAG ATCTAGCATA ACGATCTCTC TTAGTCGCCT TAGATCTAGC TAGTGAGTTG CTAATCGCTC ACTTAGATCT ACCAGCATAC CCTATACTCT TAGGCCTAGA TCTATAAGGG GGGTGGGAGG AGATGAAAAT AGATCCGAGC TCGGTACCAA GCTTGATGCA TAGCTTGAGT ATTCTATAGT GTCACTCAAT AGCTGGGGTA ACCATGGCCT TACCTTTCCC CTTTTAACGN GCCCCAACAC CACACAC // ID R25_0_000053 standard; DNA; UNC; 914 BP. XX AC R25_0_000053 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000053 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007c05.f1; XX FH Key Location/Qualifiers FH FT source 1..914 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000053_A FT misc_binding 113..146 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000053_1" FT /note="Base quality score is 3.1217e-03" FT misc_binding 146..179 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000053_2" FT /note="Base quality score is 8.2298e-04" FT misc_binding 179..212 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000053_3" FT /note="Base quality score is 1.9869e-04" FT misc_binding 212..245 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000053_4" FT /note="Base quality score is 3.7086e-03" FT misc_binding 245..278 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000053_5" FT /note="Base quality score is 4.2920e-04" FT misc_binding 278..311 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000053_6" FT /note="Base quality score is 2.9639e-03" FT misc_binding 311..344 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000053_7" FT /note="Base quality score is 4.4725e-04" XX SQ Sequence 914 BP; 330 A; 243 C; 201 G; 140 T; 0 other; GTGATGTATA CGTTCACTAT AGGGCGAATT GGGCCCTCTA GATGCATGCT CGAGCGGCGC CAGTGTGATG GATATCTGCA GAATTCCAGC ACACTGGCGG CGTTACTAGT GGATCTATAA ACCACTAGAT CGCATCCAGT CGTAGATCTA GCGAACGTAC GTGGAAGGCT GCATATAGAT CTAAATCGCA TTGGTCAGGT GCCCACGATA GATCTAATGG CTCGTAACCG TGGCCGACGT CTAGATCTAT GAATACACCT CCCCCTCGTG AATTTAGATC TACGAAATAA AAGCTCCAGA CGTACCCTAG ATCTAACATA GCGGCCGTTC CAATAACCCA TAGATCCGAG CTCGGTACCA AGCTTGATGC ATAGCTTGAG TATTCTATAG TGTCACCTAA ATAGCTTGGC GTAATCATGG TCATAGCTGT TTCCTGTGTG AAACGGGACC CGGCAAAGAA CAACGGCCAG CACAACACTA AAACACAGAC GAAACGCCAC GCACCGCACT CCCGCGCACT GACAGCACAC GGAAACAACC ACGAATCATC ACAGCAACCG CCGACGCACG GCGCCAGAAA CGACACCTGG ACGCACCAGA GCCATGACAA AGGAGCAGAG ACACACTCGC GATGAGCAGC CAGCCAGCGA ACACACCAGC AGCAGAAATA ACACAAAAGG AGAACACAAA AAAAGAAGCG ACACCAGTAA AGCACACAAA CCAAGGAGAC AACAAAAGAA GTAAACAAGA AACGGACAAG ACGAACAGGA AACACACAAC AACAAAAACA GAACAGGAAG AAAACAACGA ACAGAAAGCG AGCAAGATCA AAGACAAGCA GTACGAAGAC AAAAGCATAG AATAGATCAC CTGGTTGCCC TCCTTACTTT CCACAAAACA GCAAAGAGAG CCCA // ID R25_0_000054 standard; DNA; UNC; 730 BP. XX AC R25_0_000054 XX DT 3-JUN-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_000054 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001f10.f1; x001f10.r1; XX FH Key Location/Qualifiers FH FT source 1..730 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000054_A XX SQ Sequence 730 BP; 165 A; 83 C; 216 G; 266 T; 0 other; ATTTTTTATT GTTTGATGTG GTGATAGATT TGTATGTGGG TTGTGATGAT TTGTTATGGG AGTAATAAGT GTATATGTAA TGTTGTAATG TTGGTAGGGG GTGTGTAGGA TATATTAGGG TTTTTCTGTA ATAGGTGAGG GATAGATTTT GGTTTGATAG TGGAAGTTAT GATTTAGGGA TTGTGTAGTG TTTTTTAACT ATCTTCAGTT GGGTTTTTTG AGTGATTATT TATGTATGGT GTGGGTTGGG AGGGTGGATT GGGTATAGAG TATGGTTGTT GATATGTTGT ATGGAGTGTT GTGGTGATAT TTGTGTGTAA AGTGGAGGGG AGTATTATTT GTGGTTTGTG TGTCGTTGGG TAGCTTTGAA TGCATAAAGT TGAGTATTGT ATATTGGTGA TAAAAATGTT TGGGGTATTA TAATTATAAT TGGGGTGCTC CCTGTTAATC TCGCCAGGGT TTTCCCAGTC ACGACGTTGT TAAACGACGG CCAGTGAATT GTAATACGAC TCACTATAGG GCGAATTGGG CCCTCTAGAT GCATGCTCGA GCGGCCGCCA GTGTGATGTA TATCTGCAGA ATTCCAGCAC ACTGGCGGCG TTACTAGTGG ATCCGAGCTC GGTACCAAGC TTGATGCATA GCTTGAGTAT TCTATAGTGT CATAAATAGC TTGGCGTAAT CATGGTCATA GCTGTTTCCT GTGTGAACAC GCCCCCAGCC ACCCCAAAAA // ID R25_0_000055 standard; DNA; UNC; 243 BP. XX AC R25_0_000055 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000055 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007c06.f1; XX FH Key Location/Qualifiers FH FT source 1..243 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000055_A XX SQ Sequence 243 BP; 66 A; 53 C; 61 G; 63 T; 0 other; CCACGGCTTA ATCGCATGAT CGTATACTAT CACTATAGGG CGAATTGGGC CCTCTAGATG CATGTCGAGC GGCGCCAGTG TGATGGATAT CTGCAGAATT CCAGCACACT GGCGGCCGTT ACTAGTGGAT CCGAGCTCGG TACCAAGCTT GATGCATAGC TTGAGTTCTA TAGTGTCACC TAAATAGCTT GGCGTAATCA TGGTCATAGC TGTTTCCTGT GTGAAAAGGA AATAACAAAA AAA // ID R25_0_000056 standard; DNA; UNC; 242 BP. XX AC R25_0_000056 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000056 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001g01.f1; XX FH Key Location/Qualifiers FH FT source 1..242 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000056_A XX SQ Sequence 242 BP; 71 A; 49 C; 62 G; 57 T; 3 other; TGGGCAGGAA TGTATAGAAT CAAATAGGGC GAATTGGGCC CTCTAGATGC AGCTCGAGCG GCGCCAGTGT GATGGATATC TGCAGAATTC CAGCACACTG GCGGCGTTAC TAGTGGATCC GAGCTCGGTA CCAAGCTTGA TGCATAGCTT GAGTATTCTA TAGTGTCACC TAAATAGCTT GGCGTAATCA TGGTCATAGC TGTTTCCTGT GTGACNNNAC AAAACCAAAA AGAAAAAACA AA // ID R25_0_000057 standard; DNA; UNC; 1193 BP. XX AC R25_0_000057 XX DT 3-JUN-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_000057 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001g03.f1; x001g03.r1; XX FH Key Location/Qualifiers FH FT source 1..1193 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000057_A XX SQ Sequence 1193 BP; 289 A; 158 C; 269 G; 477 T; 0 other; CGTTTGTTGT GTTTTGTGGT GTTTTATTTT TGTTGTTGTT TTGGTTGTTG TTTTGTGTTA GTTAGTGTTT GATTATTTGT GTGGTTTGGT TTTGTTTATT GGAGTGTTGT GTAGTTTGTG GTGTTGTGTT CTTGTTTTTA TGATGTGTTG TTGTGTATTG TTTTTGTTGT GTGGTTGGTT GTGGTGTGTG TTGTTGTTTG TTTATTGTTA GTTTTGTTTT GTTGTTTGTT GATGTATGTG GTGTGTTTGT TATGTGTTGG TGTATTGGTG TGTGTTTGTG GTTGTTGTGT GGTTGTTGAT TTGTTGTTGG TTGTTATTTT ATCGTGTGTT GTGTTGTGTT GTTGGTTGTT TGTAGTGTGG TGTGTTATAT TTCTTATTTT TGTGTGTGTT GTTTGTTTTT ATGTAGTTGT TATGATGTTA GTTAGTTTAT TAGTGATGGT ATTGTTCGTG TTTGTTGTTG TTGTTTTAGT TTTGTGTTTT GTTTTGTTCT TTTATTTTTT GTTTGGGTGT TGTTTGTGTT TTGTTTTTTG GTATGTTTTG TTGTGTTTTG TATTTTTGGT GTTATTTTTT GTTTTTTTTT TGATTATTTT TTTGTGTTGT GTGTTGTTAC TGGTGCGACG TATCGAAATA CCAGCTCGCC AGGGTTTTCC CAGTCACGAC GTTGTAAAAC GACGGCCAGT GAATTGTAAT ACGACTCACT ATAGGGCGAA TTGGGCCCTC TAGATGCATG CTCGAGCGCC GCCAGTGTGA TGGATATCTG CAGAATTCCA GCACACTGGC GGCCGTTACT AGTGGATCCG AGCTCGGTAC CAAGCTTGAT GCATAGCTTG AGTATTCTAT AGTGTCACCT AAATAGCTTG GCGTAATCAT GGTCATAGCT GTTTCCTGTG TGACCCCGAA CAACAAACAC ACGCGCTGAT AACAGCAACG GACACAAGCA ACAGAGACAC AAAAAACACA AACAACAAAA ACAACAAACA CCAAATCACC ACAACAAGCA ACAAAAAAAA AAAAAAACAC AAAAACAACC AACACACCAC AAAACAAAAG ACAAAAACAC AACAACACAC GCACCAAGAA CCTAGACACG ACACACTAAA CCACCAAACA AACCATAACT AAAAAAAAAA ACATAAAAAT ATCAACCACA ACACAACTAA TCAATAATAC AAAAAAATAC TATATAATAA CAT // ID R25_0_000058 standard; DNA; UNC; 851 BP. XX AC R25_0_000058 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000058 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007c08.f1; XX FH Key Location/Qualifiers FH FT source 1..851 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000058_A FT misc_binding 115..148 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000058_1" FT /note="Base quality score is 1.3665e-02" FT misc_binding 148..181 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000058_2" FT /note="Base quality score is 5.4268e-02" FT misc_binding 181..214 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000058_3" FT /note="Base quality score is 4.5029e-02" FT misc_binding 214..247 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000058_4" FT /note="Base quality score is 8.2363e-02" FT misc_binding 247..280 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000058_5" FT /note="Base quality score is 8.2501e-02" FT misc_binding 280..313 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000058_6" FT /note="Base quality score is 7.6338e-02" FT misc_binding 313..346 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000058_7" FT /note="Base quality score is 1.0867e-01" XX SQ Sequence 851 BP; 311 A; 238 C; 139 G; 163 T; 0 other; TGATCGATAC TGTCACTATA GGGCGAATTG GGCCTCTAGA ATACATGCTC GAGCGGCTGC AGTGTGATGG ATATCTGCAG AATTCCACGC ACACTGGCGG CCGTTACTAG ATGGCTCTAG TATACGCTAG ATATGGGATG GTTGTAGATC TAGTTGGTGA CGCTAATTGG ACGGGTTTAG ATCTAGTGAG ACGGCCGCGA GATGTTGTCG TCGATCTAAA GAGTTACTCA CAGTGCAGAT CAGTAGATCT AAGCCGACAA CCAAATTGCG AGACCGTAGA TCTATGGGAA TGCAGAGTTG ACCCCCGCCT AGATCTAAGT TACTATCGGC CTAACGGACT GTTAGATCTA GATGCTAAGA CTTATATATT CAAGAGTAGC ATCCGCAGCT CGGTACCACG CTTGATGCAA TAGCTAGAGT ATTCTATAGT GTCACCCTAA ATAGCTTGGG GTAATCATGG TCATCGCTGT TTCCTGTGTT GAAACACCAC ACCACCAAAC ATAAGACCAA CACCACACAA ACATACAACA CAAACAAACC ACAACCAACA ACACACACAC ACACACACAC CACACCACAC AACAACCACA AACCACACAA CCACAAAATA CACAAACAAC CCACCACACA CACATATCAA CGACACAATA GCCATATGCA TAAGCCCAAT CTAAGACAAA CAAACCTCTT ATCCAACGAA ATCAACCAAA TAAATAACCA CAGCCCAAAA ACAAAAACAA AAAACATCAA CACAAACCAA CACTAATCAT AATCTAACCC ACATAACAAT ACAACAACTC CATCCCACTA CGACAACGAC CAGACCACCC ACCCTACCTA CCATAGAACA G // ID R25_0_000059 standard; DNA; UNC; 310 BP. XX AC R25_0_000059 XX DT 3-JUN-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_000059 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001g07.f1; x001g07.r1; XX FH Key Location/Qualifiers FH FT source 1..310 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000059_A XX SQ Sequence 310 BP; 82 A; 70 C; 75 G; 82 T; 1 other; TATAACTGTT TTTTCTCAGT TAAGCGCGCC AGGGTTTTCC CAGTCACGAC GTTGTAAAAC GACGGCCAGT GAATTGTAAT ACGACTCACT ATAGGGCGAA TTGGGCCCTC TAGATGCATG CTCGAGCGGC CGCCAGTGTG ATGGATATCT GCAGAATTCC AGCACACTGG CGGCGTTACT AGTGGATCCG AGCTCGGTAC CAAGCTTGAT GCATAGCTTG AGTATTCTAT AGTGTCACCT AAATAGCTTG GCGTAATCAT GGTCATAGCT GTTTCCTGTG TGACCNCAAA AAAACAACAA GATAAGTAAC // ID R25_0_000060 standard; DNA; UNC; 833 BP. XX AC R25_0_000060 XX DT 3-JUN-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_000060 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001g08.f1; x001g08.r1; XX FH Key Location/Qualifiers FH FT source 1..833 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000060_A XX SQ Sequence 833 BP; 84 A; 165 C; 176 G; 408 T; 0 other; TTTGTTTTTT GTGTTTTTTT GTTTTCTCTT CTCTCTGTGT TTTGTTGCGT CTTTCTATTT CGTTTTGGTT GTTTGCTTTG TTGTTTCTTT TGTGTTCGTC TGTTGCTCTT CCGTTTGTTT TTCCTTCTTG CTTGTTTGTT CTTTCTTTCT TTTTTTCTCT GTCTTTTTTT CCCTCTCTCT TTTCCTTTCT CTGCTGTTTT GTGTCCTCTT CGTTTTTTTT TGTTCGCTTT GTTGCCGCTT CTTCTTGCGT GCCCTGTTGC CGTGTCGTTA CTTTTTCCGT GCTCCCCTTC TGTGTCTCTC CTCTCGCCGC TCCTTTCTGT TTTGTTTTTT TGTTTTTTGT GGTTGGTTTT GGTTGTCTGG TGTTTTGTGT GTGTTCGTTT TTTTTTGTGT GTTTTTTTGT GTTGTCTTTT TTCTCGTTGT TCTTTTGTTT GTTGTTGTTG TCGGTTTGTT TTCTTGTTTT GTGTTTGTTG TTTTTTGTTT TTTTTGTGGG TTGTGTGGCT CTTTTGTTTT TCTGCTCTTC CGATTCTGTT TCGTCTTTCT TCTCTCCCCT CGCCAGGGTT TTCCCAGTCA CGACGTTGTA AAACGACGGC CAGTGAATTG TAATACGACT CACTATAGGG CGAATTGGGC CCTCTAGATG CATGCTCGAG CGGCCGCCAG TGTGATGGAT ATCTGCAGAA TTCCAGCACA CTGGCGGCGT TACTAGTGGA TCCGAGCTCG GTACCAAGCT TGATGCATAG CTTGAGTATT CTATAGTGTC ACCTAAATAG CTTGGCGTAA TCATGGTCAT AGCTGTTTCC TGTGTGAAAA AGACGAAACA AAACAAAAAA AAA // ID R25_0_000061 standard; DNA; UNC; 1099 BP. XX AC R25_0_000061 XX DT 3-JUN-2005 XX DE 3' Sequence of SELEX/SAGE Clone :R25_0_000061 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001g10.r1; XX FH Key Location/Qualifiers FH FT source 1..1099 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000061_A FT misc_binding 15..49 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000061_1" FT /note="Base quality score is 1.5516e-01" FT misc_binding 49..82 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000061_2" FT /note="Base quality score is 7.3224e-02" FT misc_binding 82..115 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000061_3" FT /note="Base quality score is 9.5210e-02" XX SQ Sequence 1099 BP; 409 A; 298 C; 176 G; 215 T; 1 other; TGGGACTATA GAAGATCAAG CTATGATTCA AGCATGGCAC CGAGCTCGAT CTAATATTCT CATAAATAAC ACTCCTCGTA GATCTAAGGT GCGATCTGGC TAGCTGAAAT AAAGATACTA CGGAGAGTCC ACCGCCAACA TACATAGAGA TACTATCCAT ATACGCTATA GTGCTAGCGC ACATTAACGA TCTAAGTCGA CATGACAACC ATACATTGCT CCGTGATTCA GATACTCCCT AAGATCAGCG GGCCTGTCCA GATAGATGCA TGCCAAATAA CTGTAGACCG ATGTCTGCCA ATATATCAAG CTAGTGCGGT AACGTAGCCA GGAGTAATTG CAATTCCTAA GCGATGGGAG CACACAGTAT ACGGACGCAA ATTACGGATT GATGTGAACG TAGTCCACCA ATTTATCGAC CTCGAATACG ATAGAGGTTC GTACACATGC GCACAGTTGC ACTATGGGCA CGATCCGCTA CTTAGAACGA AGGGTACGGA AGAATATAAG GAAAACACCC GCTAGGAGGA GCATAAATAC AATCGAGGAA AAAACAACAT GTATTAAATG AACGAAAAGA TCATCAACGA ATAAACAACA TCAAACATGG AATCACCAGC TACAAGATAA CGACATCCAC ACCTACTCCT CATCAACCAT CACACGATAC ATATACAAAA AAATCATACA AAAAACTAAT AACATACACA AAACTCCCCA TCTCCCACCC ACACGACCCA CACAACTACT TATTCTCTCA ACCCAACACA AACACTCAAC TAACTCACAA ACAAGCACAC TAAACAAGAA ATCACAACCA TCTATCAATA CAACCAGTCA CCATCACATC ACAACAGCGA TCCAGACCTC AGCATCAGCA AGACCGACAC AACACACACA TACTGCATCA CCATCAAGGC GTCGACATGA AACATACGAT AACTACTAGA GACGAGTACT AGCGGTCAGT ATTTCACACG AAGAATCACA AGTAACAACG AAGCAGTGAC GCAATAGTTC ATTTTCTTCT CTACCACCAA TCCACACCCA CTATACTCTC TACTCTACGG CCTGCCAGCT AGCCACGAAC CGAAGCANT // ID R25_0_000062 standard; DNA; UNC; 815 BP. XX AC R25_0_000062 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000062 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007c10.f1; XX FH Key Location/Qualifiers FH FT source 1..815 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000062_A FT misc_binding 117..150 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000062_1" FT /note="Base quality score is 1.6854e-03" FT misc_binding 150..183 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000062_2" FT /note="Base quality score is 9.4062e-04" FT misc_binding 183..216 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000062_3" FT /note="Base quality score is 6.4370e-04" FT misc_binding 216..249 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000062_4" FT /note="Base quality score is 6.1282e-03" FT misc_binding 249..282 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000062_5" FT /note="Base quality score is 5.9867e-02" FT misc_binding 282..315 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000062_6" FT /note="Base quality score is 2.4264e-02" FT misc_binding 315..348 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000062_7" FT /note="Base quality score is 1.2917e-02" FT misc_binding 348..381 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000062_8" FT /note="Base quality score is 3.3117e-02" FT misc_binding 381..414 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000062_9" FT /note="Base quality score is 4.5848e-02" FT misc_binding 414..448 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000062_10" FT /note="Base quality score is 2.9138e-02" FT misc_binding 448..481 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000062_11" FT /note="Base quality score is 1.1098e-01" FT misc_binding 481..514 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000062_12" FT /note="Base quality score is 8.9050e-02" FT misc_binding 514..547 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000062_13" FT /note="Base quality score is 1.0916e-01" FT misc_binding 547..580 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000062_14" FT /note="Base quality score is 1.3161e-01" XX SQ Sequence 815 BP; 229 A; 189 C; 188 G; 206 T; 3 other; AACGGCATGA TTCATACTAT CACTATAGGC GAATTGGACC TCTAGATACA TGTCGAGCGG CGCCAGTGTG ATGGATATCT GCAGAATTCC AGCACACTGG CGGCCGTTAC TAGTGGATCT AGTGTAAGTA GGGGTGGTGT CTTGCTTAGA TCTACTGTAA ACGCAGTACC GGACTAGGTT AGATCTAGGG TATGGTTGGT ATTCTCTACA TTTAGATCTA TGTCTTCTCC ACAATCTCAG GCGTCTAGAT CTACTGCTGC GCGGCTGCGC GGTATTGTCA GATCTAGGGT AGTGGGGGAA ACGAACGCGG TTAGATCTAC ATTCCCACAT ACCCCCGGGA CCCCTAGATC TAATCGCGAT TATGCGGGGC ATTAAACTAG ATCTAAACAG AGGGGCGATT GGATTCGTAT TAGATCTAGT AAAGTGACCG AACCTGTAGG GTGGTAGATC TAAAGCCCCG TACTAGGTGT CTAATGATAG ATCTAAAAAA ACAAACACCG GCTCGTAGGA TAGATCTAGG TTAGCTGTTG AATCGCTCCT GTATAGATCT ACCTAGAACC GTCTTTCAAA AACCCGTAGA TCTAGTTATC AGGTGCCGTC CCCAGGATAG ATTACGCCGT AATACCTCAT CATATGTCTT TGTGCGAAGT GGGAGGGAAT CATCCAGCTT CGTCCTTTTA ATCCGTCCGA CAGCTAGCAG TGGTTCATGG GCTATGTGAC GTTCTTTTGT ATAAAAACAG TCAACCACCC AACCACCACA CACAGCACAC ACAAACACAA CCACGCCAAT ACATAAAAAC ACAACAGAAC AANNN // ID R25_0_000062 standard; DNA; UNC; 874 BP. XX AC R25_0_000062 XX DT 3-JUN-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_000062 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007c10.f1; XX FH Key Location/Qualifiers FH FT source 1..874 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000062_A FT misc_binding 117..150 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000062_1" FT /note="Base quality score is 1.6854e-03" FT misc_binding 150..183 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000062_2" FT /note="Base quality score is 9.4062e-04" FT misc_binding 183..216 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000062_3" FT /note="Base quality score is 6.4370e-04" FT misc_binding 216..249 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000062_4" FT /note="Base quality score is 6.1282e-03" FT misc_binding 249..282 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000062_5" FT /note="Base quality score is 5.9867e-02" FT misc_binding 282..315 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000062_6" FT /note="Base quality score is 2.4264e-02" FT misc_binding 315..348 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000062_7" FT /note="Base quality score is 1.2917e-02" FT misc_binding 348..381 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000062_8" FT /note="Base quality score is 3.3117e-02" FT misc_binding 381..414 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000062_9" FT /note="Base quality score is 4.5848e-02" FT misc_binding 414..448 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000062_10" FT /note="Base quality score is 2.9138e-02" FT misc_binding 448..481 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000062_11" FT /note="Base quality score is 1.1098e-01" FT misc_binding 481..514 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000062_12" FT /note="Base quality score is 8.9050e-02" FT misc_binding 514..547 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000062_13" FT /note="Base quality score is 1.0916e-01" FT misc_binding 547..580 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000062_14" FT /note="Base quality score is 1.3161e-01" XX SQ Sequence 874 BP; 465 A; 233 C; 51 G; 124 T; 1 other; CTGCGATCAA GCTTGGTCCG CGGGTATNAA TCCCTAGTAC TGGCTGCAGA TGTGCTGTAA TTCTGCAGAT ATCCATCTAC ACTGACGGCC GATCGAAGCC CATCATCTAT GAGGAGCCCA AGTTCTGCCC TCATAAGTGA GCTCTGTACT TACAACTTCA CATGGCCTGT TCGTTACCAC CAACCGTCCG TCGACGTGTG AACCACACTC CTGAAAAGAA CAAAAAAAAA AAACACAACA CAACAAAAAA AAAACAAAAA AACAAAAATC CTAAGAACAC AAAACAAACA AAACAAAAAC CAAACACAAC ATTCACACAC ACCATCATAC CTCCACAAAA ATAACCAAAA CATATTCTAA AATCAATAAA CACATATCTT CAACCAACAC AAACATAACT CACTACCTAC TCAACACACA AACAACATCA ATACCAAAAT AAATCACACA AACAAATATA ACCAAAATAC ACAACATCAA CAAAAACCTT ATACAACAAA AAAAACAACT ACAAACATTA ACAAACTAAA AAAACAAAGT AATAATATAA AATAAACAAT ACAAACATAA CACATAAAAC ATACCACACA CCATCAAACA CAAAAAAACA CATCAACATA CACAACAATC AAATCACTAC CACACAATAA ATACAAAAAC ATACAAAACA AAACTCAAAA AAAAAACCAA AAAAACACAA CACCAAAAAA CACCCTCATC ACCACAACAC AATAAAACAA ACAAAACAAG AAAAATAAAC CAACAAAACA TAACACAAAA CAAACAAAAA CCATGACTTA CACAAACACA ATAAACAAAC ATACAAAAAA ATACAATAAA ACCAAAACAA TAACCAACAA AAACAAACAA ACCC // ID R25_0_000064 standard; DNA; UNC; 515 BP. XX AC R25_0_000064 XX DT 3-JUN-2005 XX DE 3' Sequence of SELEX/SAGE Clone :R25_0_000064 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001h02.r1; XX FH Key Location/Qualifiers FH FT source 1..515 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000064_A XX SQ Sequence 515 BP; 173 A; 157 C; 86 G; 99 T; 0 other; CATCACCCAA GCCGCAATCA CTATAGGTAC CTATAGAATC TCACTGCTGC ATAATGCTTG GTACCGAGCT CGGACTCACT AGTAACTGGC GCAGTGTGCT GGAATACTTG CAGATATCCA TCACACTGGC GGCCGCTCGC AGCATGCATC TAAGAGTGCC CAATTCTGCC ACTATCAGTG AGTACGTATT CACAATATCA CTTGGCCTGT ACGTATTCAC AAGCGTACGT AGACTAGGCG AACAACCACT GGACGATGAG AATTCTCAGA CTAGAGACAC CCAGCATGAT CACACAATGA ACAACGGTAC AACAGCGGTA TACTACCTAC ATACACATCA TACACATCAC CTAACCAGGT AACCAACCTA CCCAAACAAC TGACACCCAT CGAATAACCA CCTACATCCT ACCTCTCCGA CGAACTGCAC TTCACACAAA TAACATAGAG CAGACAACAT GCTCGAACGG CTGTCCGAAC ACGGCAAAAC TAATCACTAC AACAAACACC AACAA // ID R25_0_000065 standard; DNA; UNC; 964 BP. XX AC R25_0_000065 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000065 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007d02.f1; XX FH Key Location/Qualifiers FH FT source 1..964 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000065_A XX SQ Sequence 964 BP; 470 A; 206 C; 146 G; 142 T; 0 other; GCAGAAGAGT AAAAAGAGCA AGTGAATGTA TACGATTCAC TATAGGGCAA TTGGGCTCTA GATGCATGCT CGACGGGCGC AGTGTGATGG ATATCTGCAG AATTCCAGCA CACTGGCGGC GTTACTAGTG GATCCGAGCT CGGTACCAAG CTTGATGCAT AGCTTGAGTA TTCTATAGTG TCACCTAAAT AGCTTGGCGT AATCATGGTC ATAGCTGTTT CCTGTGTGAA AAGGTCGTCA GGTTACAATG ACACACGACA GAGGAGCCGG ACACATACAC GGTAGAGCCT GAAGTCGCCT AATGAGTGAG CTAACTCACA TCAATCGCGT AGCGACCCAC TGACCGAATA CCAAGTAGAG AACAGCCTGT CGTGATTGAG ACAATCCATG CAAGAAACAC ATAAAAAACA ACCAAACACA ACACAACAAA ACAAATATAA ACAACAACAT AAAATAAAAA CAAAAAAGAG AAAAAAAAAA AGCACGAAAA GAAAAAAACA AACAACACAC AGACAACAAA GACAACAAAG CATCCGAAAT AACATATACA AGAAACATAG AACAACAAAG AAACACGCAG ACAAAAAGAA AACACACACA AAGAAAAACA ACAATTACGA AACAAAACAG CAGCACAAAA CACATCACAG CAAGAAAATA AAAGAAACAA AAGAAGAATA AGAAATAAAA ACACAAAACA GAACAAAAAC AAGAACAATA AAGAAACGAA ATGCTAGAAA ATAATAAGAA ATACATACTA GCACTTTCTA CACTAGACAC TTACAACAAC ACCCAATACT AAAGATACAC AATAAACACG CACCAGGACA TGTAATATAA TAAAAAAAAT GACAATAATA ACAACATACC AAAACAACAA ACAATACAAC ACACAACAAT ACCTTACTAG AAACTACCTA ACCAATCACA CACAAACAAC AAATACATAC AACAAACAAA CGAA // ID R25_0_000066 standard; DNA; UNC; 513 BP. XX AC R25_0_000066 XX DT 3-JUN-2005 XX DE Sequence of SELEX/SAGE Clone :R25_0_000066 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001h07.f1; x001h07.r1; XX FH Key Location/Qualifiers FH FT source 1..513 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000066_A XX SQ Sequence 513 BP; 134 A; 109 C; 132 G; 138 T; 0 other; TAAGAACTCA TCAATAAGGG CGAATTTGGG CGCTTCATAA ATGAATTGTT GTTCTGTGCC TTCAACTGTG GGTGGATAGC GACACGATTT GCAGCACACT GGCGGCCGGT ACTAACTTGT TTCGAGGTCG GTTCCTAAGC TTGTTGCACT CGCTTGAGGA TGTCTATAAG GGGACCCTAC AATAACGTGG CGTCATTATG AGTATAACTC GTTTTCTGTG TGATAACCTC GCCAGGGTTT TGCCAGTCAC GACGTTGTAA AACGACGGCC AGTGAATTGT AATACGACTC ACTATAGGGC AGAATTGGGC CCTCATAGAT GCATGGCTCG AGCGGCCGCC AGTGTGATGG ATATCTGCAG AATTCCAGCA CACTGGCGGC GTTACTAGTG GATCCGAGCT CGGTACCAAG CTTGATGCAT AGCTTGAGTA TTCTATAGTG TCACCTAAAT AGCTTGGCGT AATCATGGTC ATAGCTGTTT CCTGTGTGAA AAAGACAAGA AAAACCAAAC AAA // ID R25_0_000067 standard; DNA; UNC; 789 BP. XX AC R25_0_000067 XX DT 3-JUN-2005 XX DE 3' Sequence of SELEX/SAGE Clone :R25_0_000067 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001h08.r1; XX FH Key Location/Qualifiers FH FT source 1..789 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000067_A FT misc_binding 66..99 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000067_1" FT /note="Base quality score is 5.2262e-02" FT misc_binding 99..133 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000067_2" FT /note="Base quality score is 4.2451e-02" FT misc_binding 133..166 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000067_3" FT /note="Base quality score is 2.7465e-03" FT misc_binding 166..199 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000067_4" FT /note="Base quality score is 3.7459e-03" XX SQ Sequence 789 BP; 287 A; 260 C; 91 G; 151 T; 0 other; GGTGCCCCAT ATAGGTACCT ATAGAATACT CACGCTATGA TTCATGCTTG GTACCGACGC TCGGACTCTA TAATTACAGA TAGCGACAAG TCTAATAGAT CTATGAAGCC GGGTCTGTGG CGACCGCAAT AGATCTATAG CGTTCAAGCG CACCAAGAGA CCTAGATCTA ACTACCCAAC CTTCGTACAT CACCCTAGAT CCACTAGTAA CGGCCGCCAG TGTGCTGGAA TTCTGCAGAT ATCCATCACA CTGGCGGCCG CTCGAGCCAT GCATCTAGAG GGCCCAATTC GCCCTATAGT GAGTCGTATT ACAATTCACT GGCCGTCGTT TTACAACGTC GTGACTGGGA AAACCCTGGC GATCGTACAC CGACAAACCC CAGCTATAAA TCAAAAAAAA CACACACTAT TTACCACGCA CCACACCAAC ACATCTACCA TCCCTCAACC ACCACCCCGA GACAACACCA AATACACATA CACCAACAAC ACCATACCAA ACACCACTTA ATATTACATA TAATTAAACA CCTTTCACAT CACACTATCC CAACGACAAA AACATCCACC TACCACCAGA AAACAATCAA AACACTCCCC ATAATAACTC AAAATTACAT CACAACCACA CCCTCTCCTC CTCATTTCAA TCCAATCCAC AACAAAACAA CAAGATAAAA AAAAACATCC ACAACAAACA CACCAAACCC ACAAAAACCA ATCTATACCC ACAAAAAATC TACACCTATC ACCATCCAAT CAACACACTC CATACTCCAC ATTCACCGC // ID R25_0_000068 standard; DNA; UNC; 624 BP. XX AC R25_0_000068 XX DT 3-JUN-2005 XX DE 3' Sequence of SELEX/SAGE Clone :R25_0_000068 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001h09.r1; XX FH Key Location/Qualifiers FH FT source 1..624 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000068_A XX SQ Sequence 624 BP; 278 A; 152 C; 76 G; 118 T; 0 other; TAAGCTATGC TTCAGCTTGG GCCGGTATCT CGGATACTCA ATTGCCACCC TAGCGAACCA AGTAGATACA CTAGTAACGG CCGCCAGTGT GCTGGAATTC TGCAGATATC CATCACACTG GCGGCCGCTT CGAGCATGCA TCTAGAGGGC CCAATTCGCC CTATAGTGAG TCGTATTACA ATTCACTGGC CGTCGTATTA CAACGTCGTG ACTGGAAAAA CCCATGCGAG TTTACCACAC AGAAACCTGC TATAACATTA AAACCGAAAA GCAATATATT ACGAACCACA TAACAACACC TCCAGCTCTC CATCACAAGC ATACCACCCA CGTTAGAATC CTACACATTA AACCACCAGG ACACCTAAGA TATACTCCAC ACTAACTTAA TGGACCCAAC AAATATATAC AAAAATACAG CAGAATATAA AATAAAACAA GCTAACGATA CAATAAAACT ATCATAAAGC ACACAAAAAA ACACAAAAAA AAGAACAAAA AACAAAACAA ATGTAAAATA TAAAAACAAC ATAAAATACA CAACATACTA ATACAACAAT ACATACAAAA AAACAAATAT AACAAAAAAA AAACACAAAC TATAAAAATA TAATAATAAC AACA // ID R25_0_000069 standard; DNA; UNC; 982 BP. XX AC R25_0_000069 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000069 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x001h11.f1; XX FH Key Location/Qualifiers FH FT source 1..982 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000069_A FT misc_binding 137..169 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000069_1" FT /note="Base quality score is 4.6480e-03" FT misc_binding 169..202 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000069_2" FT /note="Base quality score is 2.8342e-02" FT misc_binding 202..235 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000069_3" FT /note="Base quality score is 6.5398e-02" FT misc_binding 235..268 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000069_4" FT /note="Base quality score is 8.6083e-03" FT misc_binding 268..301 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000069_5" FT /note="Base quality score is 3.9846e-02" FT misc_binding 301..334 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000069_6" FT /note="Base quality score is 6.7754e-02" FT misc_binding 334..367 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000069_7" FT /note="Base quality score is 5.1850e-02" FT misc_binding 367..400 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000069_8" FT /note="Base quality score is 9.8886e-02" XX SQ Sequence 982 BP; 323 A; 253 C; 145 G; 261 T; 0 other; CTGCTCGCTT CCATCCTCTA CGCCGATTGG CCTCTAAATA TCTGTCAGCG GCGCAATGTG ATTGATATCT GCAGAATACC AGCACACTGG CGGCGTTACT AGTGGTCTAC TCAGATTCTT AGCGGCGCGA GTCTAGATCT AAGGCGGACG ACATCAACAA GTATTTAGAT CTAGGGCAGG CTGCGACGTC CCCTTTGTTA GATCTACTCT AGCCGGCTTT GGCAATGCAT ATAGATCTAC TTTTGCATAG TGTGGGCTCG GGCTAAGATC TACCTACTGT TCAGTCGCCG TACAGATTAG ATCTAACACC CTCACATATC CGGAACGATA TAGATCTAAG AGCACTGCGA ATTGCTCTAA TGGTAGATCT AACACAAAAC AGGGACCACA TCTACATAGA TCCGAGCTCG GTACCAAGCT TGATGCATAG CTAGAGTATT CCTATAGTGT CATCTAAATA GCTTGGGGGT AATCCCTGTG TCTTCTTCTT TTTTTTCTTC TCTTTTATAT CTGTCTCGCG ACAATCATTC CAATACAACC TACGACACGC AGTAAAATCA ATCACCAAAA CACAAACATC GGACAGTCAT ACCAAGATGA TTTCAACCAA AATCAAACAT CAGTGAACAG ACAAGACGAC ACAACATTCC ATAGCTAGAC ACTACATCAT AGCAATAACT TCAATACAAG CAGTACATTC ACCAACAATT CTGACAATAC ATAAACATCA TAATACTACC AATACCCTAT ATACAATCTA TATATCTACA GATATAAATA CAAAATCACT ATATCCTACC ATGACAAGAT AAACACCAAT ACATCTACTC AATACATTTC CTCTGCTACA ACTACAATGT ACTATACTAT AACTGTCTAT CAATATACTA GACAACACGT AACGATCTGC TATCACACTT ACACTACATC TACAACTACT GTAATCACAC ATACGACCTC AGATCTACAT CATACTAACA GC // ID R25_0_000070 standard; DNA; UNC; 236 BP. XX AC R25_0_000070 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000070 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002a06.f1; XX FH Key Location/Qualifiers FH FT source 1..236 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000070_A XX SQ Sequence 236 BP; 69 A; 53 C; 58 G; 56 T; 0 other; CACAAAAGAA ACATCAGAAA GAAGCAGTAA TATAGGGGAA TGCGCCTCTA GATATCATGT CGACGGCGCC AGTGTGATGG ATATCTGCAG AATTCCAGCA CACTGGCGGC GTTACTAGTG GATCCTGAGC TCGGTACCAA GCTTGATGCA TAGCTTGAGT ATTCTCATAG TCACCTCAAA TAGCTTGGCG TAATCATGGT CATAGCTGTT TCCTGTGTGA CACCAGAACA CGCAAG // ID R25_0_000071 standard; DNA; UNC; 292 BP. XX AC R25_0_000071 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000071 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002a07.f1; XX FH Key Location/Qualifiers FH FT source 1..292 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000071_A FT misc_binding 115..148 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000071_1" FT /note="Base quality score is 1.6867e-02" FT misc_binding 148..181 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000071_2" FT /note="Base quality score is 5.4862e-02" FT misc_binding 181..220 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000071_3" FT /note="Base quality score is 1.4187e-01" FT misc_binding 220..253 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000071_4" FT /note="Base quality score is 2.4802e-02" FT misc_binding 253..286 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000071_5" FT /note="Base quality score is 3.4853e-01" XX SQ Sequence 292 BP; 67 A; 66 C; 75 G; 82 T; 2 other; GGACTCACTA TAGGGCGAAT TGGGCCCTCT AGATGCATGC TCGAGCGGCG CAGTGTGATG GATATCTGGC AGGAAAAAAT TCCANGCANC TACTGGCGGC CGTTTACGTA GTGGATCTAT CTCCTTATGA TTTCTGACCC CGCCTAGATC TACCCATTCA GGAAGGCCTG TTGTACTTAG ATCTACATGC TAGTGTCCTG ACCAGGATGT TCATGGTAGA TCTATTGGTC GCCATGAATT TTGAGAGGGT AGATCTAGCC CGTAGAGTTG ATGCTTCATA CGTAGATCTA CC // ID R25_0_000072 standard; DNA; UNC; 239 BP. XX AC R25_0_000072 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000072 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002a08.f1; XX FH Key Location/Qualifiers FH FT source 1..239 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000072_A XX SQ Sequence 239 BP; 66 A; 50 C; 63 G; 59 T; 1 other; AGGAAAAAGC AGATGTATAG ACTCACTATA GGGCGAATTG GGCCCTCTAG ATGCATGCTC GAGCGGCGCC AGTGTGATGG ATATCTGCAG AATTCCAGCA CACTGGCGGC GTTACTAGTG GATCCGAGCT CGGTACCAAG CTTGATGTAG CTTGAGTATT CTATAGTGTC ACCTAAATAG CTTGGCGTAA TCATGGTCAT AGCTGTTTCC TGTGTGACNC GAAAAAGCAA CGCAAATAA // ID R25_0_000073 standard; DNA; UNC; 899 BP. XX AC R25_0_000073 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000073 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002a09.f1; XX FH Key Location/Qualifiers FH FT source 1..899 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000073_A FT misc_binding 141..174 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000073_1" FT /note="Base quality score is 4.9652e-04" FT misc_binding 174..207 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000073_2" FT /note="Base quality score is 1.5774e-04" FT misc_binding 207..240 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000073_3" FT /note="Base quality score is 5.4235e-05" FT misc_binding 240..273 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000073_4" FT /note="Base quality score is 7.1655e-05" FT misc_binding 273..306 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000073_5" FT /note="Base quality score is 7.1451e-05" FT misc_binding 306..339 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000073_6" FT /note="Base quality score is 9.2469e-05" FT misc_binding 339..372 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000073_7" FT /note="Base quality score is 5.9324e-04" XX SQ Sequence 899 BP; 302 A; 183 C; 250 G; 163 T; 1 other; TCAACAACAC CGTCGCGCGA CACCCCTGCA TGATGTATAG ATCACTATAG GGCGAATGGG CCCTCTAGAT GCATGCTCGA GCGGCGCCAG TGTGATGGAT ATCTGCAGAA TTCCAGCACA CTGGCGGCCG TTACTAGTGG ATCTATATGG TTGTTTATCT TGGTATCAAA TAGATCTAGG GTAACAATAC CGCTGGGACG TAGTAGATCT AGATTTTGGG AAATGTGGAA CGCGAATAGA TCTAGCTTGA GGTTGGATGC AGTGAAGCCT AGATCTAGGT TCTTATATAA TTATCATCTG TTTAGATCTA TCGAAGTGGT TGCGGCGAGG TCTGTTAGAT CTATTTACAA AAGCAAACAC CAATTGGCTA GATCCGAGCT CGGTACCAAG CTTGATGCAT AGCTTGAGTA TTCTATAGTG TCACCTAAAT AGCTTGGCGT AATCATGGTC CTAGCTGGTT TCCTGGTTAC NGAAACAAAA AAAAACATCA AACGCCACCT AGCACACACA ACAACTAAAC AAAAAAAAGA GAGCACACAC AACAGAAACT AAACAACACA GAACAAGCAA GACGACCAAC AACAAACCGA CAGAAATACT ACAACAGCAG CAAGACAGAT AGAAGAGCCA AGAACGATGT GCCTGACGGC GGAGAGCGAC GGAACGGGAC AGAGTGATAG AGGGAGCGAT CTGGAGGTAG GAGAAGGAAC GTGAGATAGC AACGAGAGAG CCATAGACGA AGAGGAGCGG CAGGCACGAG GCGACAGGAC AAGGAGCGCA AGGACGAGTA CTGCGAGAGT AGAGTTAAGT AGGTCAAAAC GGGCGAGCGA TGAGTGCGCC GGGAGAGCGC GCCAGGACGA GGAGATGAGA GCAAACAGCG AGCAGGAACG AGAGACGAA // ID R25_0_000074 standard; DNA; UNC; 248 BP. XX AC R25_0_000074 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000074 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002a11.f1; XX FH Key Location/Qualifiers FH FT source 1..248 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000074_A XX SQ Sequence 248 BP; 61 A; 50 C; 67 G; 70 T; 0 other; ATGCAGTGAT TGTATATGAC TCACTATTTG GCGAATTGGG CCCTCTAGAT GCTGCTCGAG CGGCGCAGTG TGATGGATAT CTTGCAGAAT TCCAGCACAC TGGCGGCCGT TACTAGTGGA TCCTGAGCTC GGTACCAAGC TTGATGCATA GCTTGAGTAT TCTATAGTGT CACCTAAATA GCTTGGCGTA ATCATGGTCA TAGCTGTTTC CTGAGTGAAA TGATAGAATC CGGAAGCGAT GCATGAAG // ID R25_0_000075 standard; DNA; UNC; 594 BP. XX AC R25_0_000075 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000075 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002a12.f1; XX FH Key Location/Qualifiers FH FT source 1..594 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000075_A FT misc_binding 107..140 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000075_1" FT /note="Base quality score is 5.9992e-05" FT misc_binding 140..173 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000075_2" FT /note="Base quality score is 1.8990e-04" FT misc_binding 173..206 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000075_3" FT /note="Base quality score is 1.2702e-04" FT misc_binding 206..239 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000075_4" FT /note="Base quality score is 1.1994e-04" FT misc_binding 239..272 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000075_5" FT /note="Base quality score is 9.5730e-03" FT misc_binding 272..305 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000075_6" FT /note="Base quality score is 2.8611e-02" FT misc_binding 305..338 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000075_7" FT /note="Base quality score is 2.6663e-02" FT misc_binding 338..371 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000075_8" FT /note="Base quality score is 3.1394e-02" XX SQ Sequence 594 BP; 171 A; 168 C; 124 G; 130 T; 1 other; AGATGAAGAT CACTATGGGC GAATGGGCCC TCTAGATGCA TGCTCGAGCG GCGCCAGTGT GATGGATATC TGCAGAATTC CAGCACACTG GCGGCGTTAC TAGTGGATCT AGAAGTGAGG AGGGGGATTT ATACTATAGA TCTAGCTGGG GTTTCAGGTC GTGTAGTCGT AGATCTACGA ACGCCACGCC CCATTGAACT CTTAGATCTA TATGAGGGCG AGGAAAGATG CCAGGTAGAT CTACACAACA ATTCAAACTC CAACTCCATA GATCTAGATA AACAAACTTT GGTCGAACCT TTAGATCTAG TACCCGGATG GCACAGCACA CTCGTAGATC TACCGTACCG AGCTTGAGCT TCATCCCTAG ATCCGAGCTC GGTACCAAGC TTGATGCATA GCTTGAGTAT TCTAAGTGTT CACCTAAATT GNCTGGCGTA ATCATGGTCC TTATTGTTTT CTCCTTTGGT GTAAACGCAT GCTCGCAGCA CCACCAAACC CACAAGCCGC ACACCCTCCC ACCCCCCAAC CACCAACCAT CACCCACAAC CACCCCCCCA AAACAAAAAA CACCCACCCA AACCAAAACA CGAG // ID R25_0_000076 standard; DNA; UNC; 781 BP. XX AC R25_0_000076 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000076 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002b03.f1; XX FH Key Location/Qualifiers FH FT source 1..781 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000076_A FT misc_binding 136..169 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000076_1" FT /note="Base quality score is 4.9985e-05" FT misc_binding 169..202 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000076_2" FT /note="Base quality score is 1.0453e-04" FT misc_binding 202..235 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000076_3" FT /note="Base quality score is 4.0689e-04" FT misc_binding 235..268 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000076_4" FT /note="Base quality score is 1.5684e-04" FT misc_binding 268..301 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000076_5" FT /note="Base quality score is 1.6370e-03" XX SQ Sequence 781 BP; 232 A; 235 C; 166 G; 148 T; 0 other; ACCACCCACG TTGTAATAAG AGCAGGATGT ATACGATCAC TATAGGGCGA ATTGGGCCCT CTAGATGCAT GCTCGAGCGG CGCCAGTGTG ATGGATATCT GCAGAATTCC AGCACACTGG CGGCGTTACT AGTGGATCTA GATGAGCTTA ATGGGACCTG TGTGGTAGAT CTAAACTAAT ACGTTCATCA ACCACTACTA GATCTAACTG CCGCAGGTCG GTGGGGGATT CTAGATCTAC CGTACGGCTC GCGCCCCGGA AAAATAGATC TAGTACCCTC CCAAAGTTGT CCTATAGTAG ATCCGAGCTC GGTACCAAGC TTGATGCATA GCTTGAGTAT TCTATAGTGT CACCTAAATA GCTTGGCGTA ATCATGGTCA TAGCTGTTTC CTGTGTTGAC CCGGCACGAC GGCAAGCGGC GCGGGCACTG ACGAAGAGGG AGACACGGAC CCGCACAACC GACGACAAGG ACAGAGAAGA CGGAAATGTC ACACGGCGCG CACACGCGGC CGCGGAGACC CGCCACCACC AGACCCACAG GCGGGACACG CGACGACAGA GCGGGTCCAT CCAGACGACT ACAGAAAAAT CCACACTCAC CACTTTCTCC TACTCTCCAC AATCAACTCA CTCTAATCCA TAAACTATTA AAACATCAGC AACCCTACAT TAACACCCCC CCACCTCACC CCCTCATCCA CAAAATAACC ACGCAATTAT AATACTCCAC CAACCATTAC GATAACCCAC ACCATTCACC ATAAACAAAC ACGACACACA G // ID R25_0_000077 standard; DNA; UNC; 594 BP. XX AC R25_0_000077 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000077 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002b04.f1; XX FH Key Location/Qualifiers FH FT source 1..594 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000077_A FT misc_binding 111..144 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000077_1" FT /note="Base quality score is 2.9253e-04" FT misc_binding 144..177 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000077_2" FT /note="Base quality score is 5.8325e-05" FT misc_binding 177..210 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000077_3" FT /note="Base quality score is 1.8224e-04" FT misc_binding 210..243 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000077_4" FT /note="Base quality score is 8.3070e-05" FT misc_binding 243..276 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000077_5" FT /note="Base quality score is 1.5730e-04" FT misc_binding 276..309 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000077_6" FT /note="Base quality score is 3.9987e-05" FT misc_binding 309..342 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000077_7" FT /note="Base quality score is 2.1383e-04" FT misc_binding 342..375 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000077_8" FT /note="Base quality score is 2.5184e-04" FT misc_binding 375..408 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000077_9" FT /note="Base quality score is 3.1230e-04" XX SQ Sequence 594 BP; 185 A; 109 C; 144 G; 153 T; 3 other; AGGATGATAG ATCACTATAG GGGAATTGGG CCCTCTAGAT GCATGCTCGA GCGGCCGCCA GTGTGATGGA TATCTGCAGA ATTCCAGCAC ACTGGCGGCG TTACTAGTGG ATCTATGAGC CGTGGCGGAT CGCGCAGTTT TAGATCTATA TTACGACTTC ATCTTAGTCC CAGTAGATCT AAGCTCTGCT GGGGTCCCTG GCCCAGTAGA TCTAGGGAGT TGTTTGGCTT TCACTGAATT AGATCTAACT GTAGCAAGAA GATGGTGTAT AATAGATCTA GAGCAGCGTC CGATCGAGGG TTGGTTAGAT CTAGGCGTCG TTTATGATCG TCGCTAGGTA GATCTAGAAC AGCGTGCGTG ATGTCTTCTC ATAGATCTAA TGAATGATAT TCCCATTTGG TGAGTAGATC CGAGCTCGGT ACCAAGCTTG ATGCATAGCT TGAGTATTCT ATAGTGTCAC CTAAATAGCT TGGCGTAATC ATGGTCATAG CTGTTTCGTG GTTGAACNNN AAAAAAACGA AAAAGAAAAA CGAAAAAAAA AATGACAAAA GAAAACGACA AACAAACAAA ACAAACAAAA TAACATAAAA TAAA // ID R25_0_000078 standard; DNA; UNC; 875 BP. XX AC R25_0_000078 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000078 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002b07.f1; XX FH Key Location/Qualifiers FH FT source 1..875 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000078_A FT misc_binding 121..154 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000078_1" FT /note="Base quality score is 9.1591e-04" FT misc_binding 154..187 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000078_2" FT /note="Base quality score is 1.3112e-03" FT misc_binding 187..220 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000078_3" FT /note="Base quality score is 7.9068e-05" FT misc_binding 220..253 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000078_4" FT /note="Base quality score is 1.0404e-04" FT misc_binding 253..286 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000078_5" FT /note="Base quality score is 2.1394e-04" FT misc_binding 286..319 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000078_6" FT /note="Base quality score is 3.3185e-04" XX SQ Sequence 875 BP; 346 A; 150 C; 222 G; 155 T; 2 other; ATAACACGAT GATAGAAGAT TCACTATAGG GCGAATTGGG CCTCTACGAT GCATGCTCGA GCGGCGCCAG TGTGATGGAT ATCTGCAGAA TTCCAGCACA CTGGCGGCCG TTACTAGTGG ATCTAGCAAG CATCATTAGA TAAAATAATT TAGATCTACA TTGCAGGGCA CTTCTCGGAG GCTTAGATCT AGGGTGTTGA TACGGATTAT TATGCTTAGA TCTATGGGCA ACAGTTCTGG GCTAGAGGGT AGATCTAAGC GTGTATGGTA AAGGTTGCCA GTTAGATCTA GGCATAATGA GAAGGGGATT TTCCTTAGAT CCGAGCTCGG TACCAAGCTT GATGCATAGC TTGAGTATTC TATAGTGTCA CCTAAATAGC TTGGCGTAAT CATGGTCATT GCTTGTTTCC TTGGTGACNN GGAAAACAAG ACAACACGAC AGCATAGAGA AAAGAAAAAT AAAGTACAAC GCAGAAGAAG ACAAAAAGAA GCAAACAGCC AGCGACATAC AAAAAGCGAG CATAGGCAAA AGTAGACCAG AAACGAATGA CAGCAACACA CGAACACAGG ACAGTAGCGA AGACAAGAGA ACGAGACAGA ATAAACATAC ATTCATGCAC ATAGACAAGA AGATGAAAAC GGAAATAATC ACGAAACTAA GAGGTAGAGA ATAAAGAAGA GAAGATGGAT ACGAGAAAGA CTAGGAAGAG AGAGAAGACG AGACAGAAAG AAGGGAAGAA GAACATAGAA AGAAAAGAAC AAGAAGAAAG CACAAGAACA AGCATACGAA TACAGGAGTC AACGTACAGC GACAAGATGA GACGCTGAGA CAGAGTGGAT AAGCTGCAGA CCACAATAGC AGCAAAACAA CGGAA // ID R25_0_000079 standard; DNA; UNC; 418 BP. XX AC R25_0_000079 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000079 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002b09.f1; XX FH Key Location/Qualifiers FH FT source 1..418 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000079_A FT misc_binding 127..161 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000079_1" FT /note="Base quality score is 6.3752e-02" FT misc_binding 161..194 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000079_2" FT /note="Base quality score is 1.4873e-03" FT misc_binding 194..227 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000079_3" FT /note="Base quality score is 6.4605e-04" FT misc_binding 227..260 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000079_4" FT /note="Base quality score is 6.8131e-03" FT misc_binding 260..293 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000079_5" FT /note="Base quality score is 4.6515e-02" XX SQ Sequence 418 BP; 130 A; 88 C; 99 G; 97 T; 4 other; CAACCGAAAA AAAAGAAGAA TAGAATAAAA TTATATAGGG GAATTGGGCC CTCTAGATGC ATGTCGAGCG GCGCCAGTGT GATGGATATC TGCAGAATTC CAGCACACTG GCGGCGTTAC TAGTGGATCT ATGAGGGAGA GGAGGCTGCG TTGCTTGTAG ATCTAGACAG GAGCTGTTCC CCTAGCCACG TAGATCTAGT AAGTCGGCTA GATGCCCCCA GCATAGATCT ACCACCCCGG TACACGCTGA TTTCTATAGA TCTAAAACTT AAAAGAATCT CCGAATAGCC AGATCCGAGC TCGGTACCAA GCTTGATGCA TAGCTTGAGT ATTCTATAGT GTCACCTAAA TAGCTTGGCG TAATCATGGT CATAGCTGTT TCCTGTGTGA ANNNNAAAAC AAACCAAAGA AGAACAAA // ID R25_0_000080 standard; DNA; UNC; 971 BP. XX AC R25_0_000080 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000080 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002c03.f1; XX FH Key Location/Qualifiers FH FT source 1..971 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000080_A XX SQ Sequence 971 BP; 467 A; 280 C; 131 G; 91 T; 2 other; CGATGTCCCA CCCGGGATGC TCGTTCCTAT GGGCGATTGG GCCCTCTAGA CTGCATGCTC GCGCGGCGCC CGTGTGCTGG CTCTCTGCAG CATTCCAGCA CACTGGCGGC GTTACTAGTG GCTCCGCGCT CGGTCCCAAG CTTGATGCAT CGCTTGAGTA TTCTATAGTG TCACCTCAAT AGCTTGGCGT CCTCCTGGTC ATAGCTGTTT CCTGTGTGAC CNTCACCCAA CCCAGCACAT GATTCCCATC CTACAATAGA AAACCAGCAC ACCCAACAAC CAACAAAAAC AAACAAACAA TAACACACCA AACTATAAAA ACACAACAAC AACACCAACA CACACAAATC AAAACAAAAA AAACAAACAT ACAAATACAA TCACAAAAAC AACTACCATA ATCACAACAA CCAAAAAAAC AACACCCATA CAACCACAAA CAAACACAAC CACACACACC ACGAGAACAA AGAGAGACTG ACACGAAAAC AGACACACGG AACCACACGC ACAAAAGCCA TCCCAAACAG AGAGAGCACC ACACACCAAC ACAGCCAAGA CGGAACCAGA ACTACAGAGA TACACACAAC AAACAAAGGC ACAAGTCAAC AAAACACAGA GTGAAAACAA CCCAATCACA ATATCAAACC AGAGACAGAA ACAAAGGAAC CCAGCCACAG ACGAACCCAC GAAACAACAG GACAAAAAAG AAAGCGAATC AAAACCAAGA AACACGACAA CACAAAACAC AAAACAGAAA AAACAAACAA AACAACAAAC AACAGCAAAA ACACAAAACA CAAAACAAAC AGCAAAAAAG ACAAACAAGA AACAATCAAA AACACAACAC GACAGAACAA ACGATAGAAA CAAGCAAACA GAAAAAAAGA AATAAAACAC AGACCACAAA GAAAAACAGA CACGAAGACA CGACAAAAAG AAAAAAGAAA CAGCAAAAAC AAAACAAAAC N // ID R25_0_000081 standard; DNA; UNC; 762 BP. XX AC R25_0_000081 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000081 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002c04.f1; XX FH Key Location/Qualifiers FH FT source 1..762 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000081_A FT misc_binding 122..155 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000081_1" FT /note="Base quality score is 4.4400e-03" FT misc_binding 155..188 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000081_2" FT /note="Base quality score is 9.4431e-03" FT misc_binding 188..221 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000081_3" FT /note="Base quality score is 5.2517e-04" FT misc_binding 221..254 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000081_4" FT /note="Base quality score is 5.9248e-05" FT misc_binding 254..287 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000081_5" FT /note="Base quality score is 6.3787e-05" FT misc_binding 287..320 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000081_6" FT /note="Base quality score is 2.5936e-04" FT misc_binding 320..353 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000081_7" FT /note="Base quality score is 4.0151e-05" FT misc_binding 353..386 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000081_8" FT /note="Base quality score is 6.5469e-05" FT misc_binding 386..419 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000081_9" FT /note="Base quality score is 1.0007e-04" FT misc_binding 419..452 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000081_10" FT /note="Base quality score is 7.6773e-03" FT misc_binding 452..485 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000081_11" FT /note="Base quality score is 1.7887e-03" XX SQ Sequence 762 BP; 259 A; 166 C; 153 G; 180 T; 4 other; CGAATGGGCC TCTAATGCAT GTCGAGCGGC GCCAGTGTGA TGGATATCTG CAGAATTCCA GCACACTGGC GGCCGTTACT AGTGGATCTA TATATTCGTG ATTGTTGCCA GTCACAGATA GATCTACATT GAGACCTGAC GGACTGCAGG ATAGATCTAA CCAGGGTGGG AGCGCGGCCT AATGTAGATC TACTCCACTC TGTTGGAACT GCCTTACTAG ATCTAGGAGG CGTGCATGTC ACTCGTGTTG TAGATCTAAG AAACGTTATT CCAGGATGCA AGCTAGATCT ACTTTTAGGC CCAACTCACT TGACCCTAGA TCTACGTAGT TGGAATTTTG CGAGTCTTTT AGATCTAACC CCGCCGCTCA TCAGTTACAC ACTAGATCTA GCAGTTGGGT GGAGGTGTGT AGTTCTAGAT CTAGGATTGG CGCAGGATTT AGGATGGTTA GATCTATTTA CCCTGTACCG TGAAGCGTAG CTAGATCCGA GCTCGGTACC AAGCTTGATG CATAGCTTGA GTATTCTATA GTGTCACCTA AATAGCTTGG CGTAATCATG GTCTGCTTCC TGTTTTTATA AACNNNNATT CAAACACCAA AATCAAACAA AACAACAAAA AAAAAATAAG AAATAAAGCA AGACAAAATA CACACAACAC AACACACACA CAAACGCTAA AAACACAAGA CACAACACAC ACCACACAAA ACAATAACGA CAAACAAAAC AAAGCAAAAA AAAAAACAAA TAAAAAAAAA AT // ID R25_0_000082 standard; DNA; UNC; 757 BP. XX AC R25_0_000082 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000082 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002c05.f1; XX FH Key Location/Qualifiers FH FT source 1..757 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000082_A FT misc_binding 119..152 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000082_1" FT /note="Base quality score is 5.1866e-03" FT misc_binding 152..184 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000082_2" FT /note="Base quality score is 5.9847e-03" FT misc_binding 184..217 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000082_3" FT /note="Base quality score is 3.7439e-03" FT misc_binding 217..250 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000082_4" FT /note="Base quality score is 1.4205e-02" FT misc_binding 250..283 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000082_5" FT /note="Base quality score is 5.8132e-02" FT misc_binding 283..316 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000082_6" FT /note="Base quality score is 1.7856e-02" FT misc_binding 316..349 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000082_7" FT /note="Base quality score is 5.2585e-02" FT misc_binding 349..382 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000082_8" FT /note="Base quality score is 5.7505e-03" XX SQ Sequence 757 BP; 267 A; 184 C; 144 G; 162 T; 0 other; ACGCCGGATA TAGACACGGT TCACTCATAG GCGAATTGGG CCTCTAGATG CATGCTCGAG CGGCGCCAGT GTGATGGATA TCTGCAGAAT TCCAGCACAC TGGCGGCGTT ACTAGTGGAT CTACTCTGGG CGAACAGCAC AAAAATGTTA GATCTAAGCT AATAACTGCT CCGTCCCTAC TAGATCTACA GGGGTGGGTA GGTGCTCTGC AGCTAGATCT AGTCGGTGTG TAGGAGGAGC GTAACGTAGA TCTAAGTCAG AACCCTATAA GTATGACGGT AGATCTTATG CAAGTCTCGA CCACCTTAGA GTTAGATCTA CCTTTAACAA CATCGGGTTA CCCCCTAGAT CTAAGTTACG CATACTGGAT GTACTCAGTA GATCCGAGCT CGGTACCAAG CTTGATGCAT AGCTTGAGTA TTCTATAGTG TCACCTAAAT AGCTTGGCGT AATCATGGTC ATAGCTGTTT CCTGTGTGAA ATCCCCAGGG GTTAACCCCG TCACGACGGC CGCAGGGGAT CACCCCCACT TCACACATGC CAGAATGTAC CACCTACAAT AACTATATAA GAAAAACAAA AACGAAAAAC AACAAAAAAC ACATATACAT TCACACAAAC AACAACCACA TCAACCCAAA AAATATAGTC ATATAACTAA ATAACATACG AAAAAAACAA AACCGAAGAT ACAACCAAAA CATACAAATA CTAACACAAC TAACACACAC AACATAAAAG ACACAACACA AGATACA // ID R25_0_000083 standard; DNA; UNC; 908 BP. XX AC R25_0_000083 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000083 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002d03.f1; XX FH Key Location/Qualifiers FH FT source 1..908 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000083_A XX SQ Sequence 908 BP; 485 A; 179 C; 130 G; 114 T; 0 other; AAACAGACAA AACAACAGCA TTGTCGAAGA GTAATATAGG GTGAATTGGG CCCTCTAGAT GCATGCTCGA GCGGCGCAGT GTGATGGATA TCTGCAGAAT TCCAGCACAC TGGCGGCGTT ACTAGTGGAT CCGAGCTCGG TACCAAGCTT GATGCATAGC TTGAGTATTC TATAGTGTCA CCTAAATAGC TTGGCGTAAT CATGGTCATA GCTGTTTCCT GTGTGACAAA ATATCACTAA TGTAAATAAT ATCATCAAAT GCAATGACAA CACAATAAAA CATAAAAATA ACAAACAATA ATAAAAACAT ATAAATCAAT AACATAAACA AAAAAAAAAA GAAAAAAAAA AACAACAAAC AACAACAACA AAAATCAAAA AAACAACAAA ATATACAACA ACAATCAATA AACAATACAT CAAACTATAA CATACACACA ACACAAACAC AAAAATAAAA AAAAAACAAA AAAAAACCAA TAAGCATACT AAAACAACAT CAAAATAATA AAAAACAATC ATACATGAAA AAATATACAC ATCAAAAAAT AAAAAAAAAA AAAACACACA ACAAACCCAA ATAAAAAACA AAAACGATCA ACACAACAAA CAAACCATAA AATACAATAA ATACACACAA ACACACATCA CAAACCATAA AGGACAGAAA CACAGAAAAA CGAAAAAAAC AACCAGCAAA CCAGACGAAG AACACAAAAG CCAAGAAAAA GAACAGACAG AAAAAGGGAA ACAGTCGCGC AAAGCGAGCG AGAAAAGAAC GGCAACAGCA GAGCGACCAC AGAAAGAGAA GCAGAGACAG AGACGGCGAA AAGCGCCAGA AGCAGATAGA CAACGAGACG AAGCACAAAG AGAAGAAACA ACAGAGGGAA AGCAACAAGC CAAGAACA // ID R25_0_000084 standard; DNA; UNC; 416 BP. XX AC R25_0_000084 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000084 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002d04.f1; XX FH Key Location/Qualifiers FH FT source 1..416 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000084_A FT misc_binding 133..166 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000084_1" FT /note="Base quality score is 7.0674e-03" FT misc_binding 166..199 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000084_2" FT /note="Base quality score is 1.8228e-03" FT misc_binding 199..232 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000084_3" FT /note="Base quality score is 2.8215e-04" FT misc_binding 232..265 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000084_4" FT /note="Base quality score is 1.1127e-03" XX SQ Sequence 416 BP; 130 A; 90 C; 90 G; 104 T; 2 other; CACAAAGCAA ACAATCCCGC TGATAGATAC GACTCACTAT AGGGCGAATT GGGCCCTCTA CATGCATGCT CAGCGGCGCC AGTGTGATGG ATATCTGCAG AATTCCAGCA CACTGGCGGC CGTTACTAGT GGATCTAAGA TGTGATTAAT CGTAACGTGT CGTAGATCTA GCTAGCGACA TCTTTTAATG CAACGTAGAT CTAGTGGCAG GAATCTGATC TAGTCGTGTA GATCTAGCTT TTATGAACAT TCTGGGTTCC GTAGATCCGA GCTCGGTACC AAGCTTGATG CATAGCTTGA GTATTCTATA GTGTCACCTA AATAGCTTGG CGTAATCATG GTCATAGCTG TTTCCTGTGT GACCNNACAC AACCCAAAGA CACTCAGAAC AAAACAAAAA AAAAAAAAAA AAAAAA // ID R25_0_000085 standard; DNA; UNC; 680 BP. XX AC R25_0_000085 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000085 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002d05.f1; XX FH Key Location/Qualifiers FH FT source 1..680 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000085_A FT misc_binding 114..147 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000085_1" FT /note="Base quality score is 1.1951e-02" FT misc_binding 147..180 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000085_2" FT /note="Base quality score is 2.2222e-02" FT misc_binding 180..213 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000085_3" FT /note="Base quality score is 6.9472e-03" FT misc_binding 213..246 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000085_4" FT /note="Base quality score is 1.0957e-02" FT misc_binding 246..279 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000085_5" FT /note="Base quality score is 1.6424e-02" FT misc_binding 279..312 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000085_6" FT /note="Base quality score is 5.6111e-02" FT misc_binding 312..345 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000085_7" FT /note="Base quality score is 5.9844e-03" XX SQ Sequence 680 BP; 284 A; 139 C; 128 G; 129 T; 0 other; TAGAAAGAAA AATATACTAT AGGATGAATA TGAGCCTCAT AAATACATGC TCGAGCGGCG CAGTGTGATG GATATCTGCA GAATTCCAGC ACACTGGCGG CCGTTACTAG TGGATCTAGG ATTGCATGAT AGCCTCCCCC TCATAGATCT AAGGGCTGTA TTTCTATAGT TTGTGTTAGA TCTAGGTGGT TGGCTCAGGC GTAAGGTGTT AGATCTACCG GGCGGCGCCT GTAGATTGAG TATAGATCTA CCTGACTCCA TCGGGGCCAG CGGGCTAGAT CTAGTTCAAT ACACCGGGCT CCTATATTTA GATCTACAAA TACCAATTAG TCAAACTGCG ATAGATCCGA GCTCGGTACC AAGCTTGATG CATAGCTTGA GTATTCTATA GTGTCACCTA GATAGCTTGG CGTAATCATG GTCATAGCTG TTTCCTGTGT TGACACACCA AACAACACAA CAACACAAAA AAACACAAAC CAAAATACAC CAACCAACAA CAACACAAAA GAACACAACA AAACACAACA AAACAACAAA GAAAAAGAAA GAGACAAGAA ACAAGAATAG AACAGAAAAA ACGACAAAAC ACAACAACAG AGAGAAGATA GAAACAAAAA ACAAGAAAAA ACAAAAAAGA AAAACAACAA AAAAAAAACA AAACAGACAA AAAAAAAAAA // ID R25_0_000086 standard; DNA; UNC; 884 BP. XX AC R25_0_000086 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000086 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002d06.f1; XX FH Key Location/Qualifiers FH FT source 1..884 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000086_A XX SQ Sequence 884 BP; 456 A; 228 C; 94 G; 106 T; 0 other; AAAAAAAACC ATTGATGCTC AGTATATATA AGGGAAAGGC CTCCAGATAC ATGTCAGCGG CGCAGTGTGA TGGATATCTG CAGAATTCCA GCACACTGGC GGCCGTTACT AGTGGATCCG AGCTCGGTAC CAAGCTTGAT GCATAGCTAG TATTCTATAG TGTCACCTAA ATAGCTTGGC GTAATCATGG TCATAGCTGT TTCCTGTGTG ACATAAACCA ACACATAAAA CAGAACAACG ACCCACATAC CAACACTCAT CAAACTCAAA ACAAAAAATA TAACAGATAC AATAAAAAAC AAACAAAAAC AATACAAACA AACATACAAA CACAAATCAA CAAATATAAA ACAACAATAC ACAAACCAAC AATAACCAAC CACAACAACC TCAACAAAAC AATACAACAT ACCACACCAC TCACTACCCA ACACCAACAC AACATACAAA CAACCAAAAA CAACAACAAA TAAACACACA ACATCACAAA TCAAAACAAA AAGAACACAA AAACAATAAA ACACCATACA AAAACTAAAA AACACACAAC TAAACACCAA ACCATAATAA ACCAAACATC ACACAACATT CATCTCAATA AAAAAAACAA AACCACATCA ACCCAACTCC ACACACATGA CCCACAACTA CACAACAAAC AAACAACAAC AGAAATACGA CAAAACAAAA CAAAAAACAC GATGAAACCG AATAAAAGAA AAACCAAAAA AAAACACACA AGAAACGCAA ACTAACAACA GCACGACAAC GAAGACACAA AACATCCAAG TCGACACAAG CAAAACGCAA CGAACAGGTG AAAAAGCGAG AGCAAGATGC GAGGAAAGAA GAGGACGAAA ACAAGACAAG AAAGACCAAA ACAC // ID R25_0_000087 standard; DNA; UNC; 808 BP. XX AC R25_0_000087 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000087 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002d07.f1; XX FH Key Location/Qualifiers FH FT source 1..808 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000087_A FT misc_binding 110..144 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000087_1" FT /note="Base quality score is 4.4189e-02" FT misc_binding 144..177 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000087_2" FT /note="Base quality score is 4.3181e-02" FT misc_binding 177..210 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000087_3" FT /note="Base quality score is 5.0526e-02" FT misc_binding 210..243 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000087_4" FT /note="Base quality score is 6.4098e-03" FT misc_binding 243..276 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000087_5" FT /note="Base quality score is 1.1245e-02" FT misc_binding 276..309 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000087_6" FT /note="Base quality score is 9.0437e-03" FT misc_binding 309..342 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000087_7" FT /note="Base quality score is 2.4063e-03" FT misc_binding 342..375 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000087_8" FT /note="Base quality score is 4.0522e-03" FT misc_binding 375..408 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000087_9" FT /note="Base quality score is 1.1302e-02" FT misc_binding 408..441 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000087_10" FT /note="Base quality score is 1.1733e-03" FT misc_binding 441..474 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000087_11" FT /note="Base quality score is 9.5300e-03" FT misc_binding 474..507 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000087_12" FT /note="Base quality score is 5.6193e-03" FT misc_binding 507..540 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000087_13" FT /note="Base quality score is 1.0074e-02" FT misc_binding 540..573 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000087_14" FT /note="Base quality score is 7.3142e-02" FT misc_binding 573..606 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000087_15" FT /note="Base quality score is 1.4703e-01" XX SQ Sequence 808 BP; 245 A; 192 C; 165 G; 205 T; 1 other; TGTAGAAAAG TATACTATGG TGACATGGGC CGCTACATCC TGCTCCGCGG CGTCAGATGT GATGGATATC TGCAGAATTC CAGCACACTG GCGGCCCGTT ACTATGTGGA TCTACTTATC CCCCACGGAG TTGACGAATC TAGATCTACA AAGTTAGTAC ATCTATGTGG ATCTAGATCT AAACTAGGGG GCGATCATTT TCTTTGTAGA TCTACAATCG GTCTGGGCTA CATAAACAAT AGATCTAGCG CATGCCTTGC CCCCGGTGGG CTTAGATCTA TTTCTCTTGC GGCGGTGGGG GGTGGTAGAT CTAGGCTGCG ATCGAGCCGG GTATACTGTA GATCTATCGA CACGTCCTAC CCTTTCCCCG TTAGATCTAC TCTTACCTCG TTGCGGACCT CCACTAGATC TAACAGGAGC CCTGCTTCCC ACTTCTATAG ATCTAGCAGT CAAGAACCTC CGTACAGTTT TAGATCTATT AATGCGCAAT CCCAAAAATT GCCTAGATCT AGGCCAAAGC ATTTGTACTA GTACTTTAGA TCTAAACAGT TATGTTGAGT CCTGAGAGGT AGATCTAAAG GTGCTCCCAT GCATATTGAT GATAGATCCG AGCTCCGGTA CCAGCTTGAT GCCTAGCTTG AGTATTCTAT AGTGTCACCT GAATTGGTGG GGTATCCTGC TTCTCCTGTT GTGAAACNAG CAAGAAATCC ACAAAAACAC AAAACAAAAA ACAAAACAAC AAATAAAACA ACAAAACAAA CACAACCGCA ACACAAACAA AAACAAGACA AATACAAAAA AAACAAAC // ID R25_0_000088 standard; DNA; UNC; 874 BP. XX AC R25_0_000088 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000088 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002d08.f1; XX FH Key Location/Qualifiers FH FT source 1..874 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000088_A XX SQ Sequence 874 BP; 495 A; 158 C; 119 G; 101 T; 1 other; ACACAGTACA CACTGATGAT AGAGTACTAT AGGGTGAATT GGGCCTCTAG ATGCATGCTC GAGCGGCGAC AGTGTGATGG ATATCTGCAG AATTCCAGCA CACTGGCGGC CGTTACTAGT CGAGCTCGGT ACCAAGCTTG ATGCATAGCT TGAGTATTCT ATAGTGTCAC CTAAATAGCT TGGCGTAATC ATGGTCATAG CTGTTTCCTG TGTGAACNGA AAAAAACAAC AAGGACATGA ATAAGAAAGT ATAAAAACAA TACAAACATC AAAACAAAAA AAAAAACAAA AAACAAAACA ACATACAAAA AATAAAACAC AATCAAAAAA CACAAAAATA ACCAAAACAT AAACATCACA CACTACCAAA AAACATAAAA ATCCAACATA CAACAAACAA TACAACAACA AAAACAATCA AACTACACAT AAAAGCACGA GGAGAAGAAC CAGAGGTAGA CGAAAAGTAG GAGGGCAGCC AAAGCAAAAA AAAGGAGCAA ACAAACAGCG GAGAAGGATG GACCGAGACA CAAAGAAGGA AAGAAAGAAG AACAGAGGAA GAAAAAAGAA ACAAAACAAA AAAGAAGAAC AAAGCAAGAA ACAATGAACG AGAAAAAAAT AAATAACATA AAGAAAGAAA ACAAATAAAA AACAATAAAC AAACAACATA ACATAAAACA CAATAAACAC ACAACAAATA TAAAAATAAC AAACAAACAA AAATAAACGA AACACACACA CCAAAAAAAC AACATACACA AAAAAATGCA CACAAAATAC AAAAACAAAA AAGACAAACA AATACAAAAA AACAAAAAAA AAAAAAAACA AATAAACAAA AAAGACAATA AAAAAAACAA AACAAAACCA CCAA // ID R25_0_000089 standard; DNA; UNC; 639 BP. XX AC R25_0_000089 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000089 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002d09.f1; XX FH Key Location/Qualifiers FH FT source 1..639 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000089_A FT misc_binding 111..145 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000089_1" FT /note="Base quality score is 5.6479e-03" FT misc_binding 145..178 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000089_2" FT /note="Base quality score is 2.3627e-04" FT misc_binding 178..211 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000089_3" FT /note="Base quality score is 6.9193e-05" FT misc_binding 211..244 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000089_4" FT /note="Base quality score is 8.7151e-05" FT misc_binding 244..277 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000089_5" FT /note="Base quality score is 2.5451e-04" FT misc_binding 277..310 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000089_6" FT /note="Base quality score is 7.3208e-05" FT misc_binding 310..343 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000089_7" FT /note="Base quality score is 4.2615e-05" FT misc_binding 343..376 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000089_8" FT /note="Base quality score is 3.1698e-05" FT misc_binding 376..409 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000089_9" FT /note="Base quality score is 8.7470e-05" FT misc_binding 409..442 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000089_10" FT /note="Base quality score is 3.6612e-04" FT misc_binding 442..475 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000089_11" FT /note="Base quality score is 2.1410e-03" FT misc_binding 475..508 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000089_12" FT /note="Base quality score is 7.7274e-03" XX SQ Sequence 639 BP; 173 A; 134 C; 166 G; 161 T; 5 other; AGGATGATAG ATCACTATAG GGCGAATTGG GCCCTCTAGA TGCATGCTCG AGCGGCGCCA GTGTGATGGA TATCTGCAGA ATTCCAGCAC ACTGGCGGCG TTACTAGTGG ATCTAAGGAC AGATTGGTGA GATACTTTAG GTAGATCTAG AGATCCGGTG CTGGAGTTTT CCCATAGATC TACCACACAA TTTTAGCGTC GATGACATAG ATCTATGGAT GTGCGCAGTG GGTCAAACAC TAGATCTAGA ACTAGCACAG GCCGTATCTC AGGTAGATCT AGTTTGGAAT ATTGCGGGGA GGGGTTTAGA TCTATACGCT CTGAGCGCAG TAATAGTCGT AGATCTAGGT GCGGGGCATT TGGTGAAGAG GGTAGATCTA TTGACATCCT TCCGCCGCAA TCCCATAGAT CTACCCGCAT CTTATGGAAG AGGGATATTA GATCTAGGCG GAGATCAGAA CCTAGAGGTT GTAGATCTAA ACACTCCTCT CATACAAGTT GATATAGATC CGAGCTCGGT ACCAAGCTTG ATGCATAGCT TGAGTATTCT ATAGTGTCAC CTAAATAGCT TGGGGTAATC CTGGGTCTAG CTGTCCGGGT AGAAANNNNN TCCAACCCCA CACACACACA CCCAACAAG // ID R25_0_000090 standard; DNA; UNC; 243 BP. XX AC R25_0_000090 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000090 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002d10.f1; XX FH Key Location/Qualifiers FH FT source 1..243 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000090_A XX SQ Sequence 243 BP; 62 A; 59 C; 62 G; 58 T; 2 other; CCCAGCACAA AAACAAAGCG GATGTAACGA TCATATAGGG CGAATTGGGC CCTCTAGATG CATGCTCGAG CGGCGCAGTG TGATGGATAT CTGCAGAATT CCAGCACACT GGCGGCGTTA CTAGTGGATC CGAGCTCGGT ACCAAGCTTG ATGCAGCTTG AGTATTCTAT AGTGTCACCT AAATAGCTTG GCGTAATCAT GGTCATAGCT GTTTCCTGTG TGAANTNCTC GACCCACCCA GAC // ID R25_0_000091 standard; DNA; UNC; 241 BP. XX AC R25_0_000091 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000091 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002d12.f1; XX FH Key Location/Qualifiers FH FT source 1..241 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000091_A XX SQ Sequence 241 BP; 56 A; 59 C; 64 G; 61 T; 1 other; ACCCGTGCAC CTCCGTGACT GATACGATCA CTATAGGGGG ATTGGGCCCT CTAGATGCAT GCTCGAGCGG CGCCAGTGTG ATGGATATCT GCAGAATTCC AGCACACTGG CGGCCGTTAC TAGTGGATCC GAGCTCGGTA CCAAGCTTGA TGCATAGCTT GAGTATTCTA TAGTGTCACC TAAATAGCTT GGCGTAATCA TGGTCATAGC TGTTTCCTGT GTGACANGAT AGACACAGCC A // ID R25_0_000092 standard; DNA; UNC; 791 BP. XX AC R25_0_000092 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000092 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002e02.f1; XX FH Key Location/Qualifiers FH FT source 1..791 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000092_A FT misc_binding 125..158 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000092_1" FT /note="Base quality score is 4.6856e-02" FT misc_binding 158..191 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000092_2" FT /note="Base quality score is 1.2364e-03" FT misc_binding 191..224 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000092_3" FT /note="Base quality score is 1.8558e-04" FT misc_binding 224..257 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000092_4" FT /note="Base quality score is 7.6734e-04" FT misc_binding 257..290 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000092_5" FT /note="Base quality score is 3.2356e-03" FT misc_binding 290..323 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000092_6" FT /note="Base quality score is 7.7421e-04" XX SQ Sequence 791 BP; 316 A; 176 C; 178 G; 118 T; 3 other; GGAAGAAAAA GACGTGATGA TAGATCACTA TAGGGCGAAT CGGGCCCTCT AGATGCATGC TCGAGCGGCG CCAGTGTGAT GGATATCTGC AGAATTCCAG CACACTGGCG GCCGTTACTA GTGGATCTAT TCTGCCTGCA TATATTGTTC CGGTTAGATC TATACAACAT CAGCAAACGG CCATCCGTAG ATCTAAGCTA ACACGTGAGA GCCCCGGACA TAGATCTAAT ATACGTCGTA TCGCTTCTCA CCCTAGATCT ATAGTGGGGC AACGGTGGGG CGCCCCTAGA TCTAGCCCTC ACTGTGGGTC ATAAACCCTT AGATCCGAGC TCGGTACCAA GCTTGATGCA TAGCTTGAGT ATTCTATAGT GTCACCTAAA TAGCTTGGCG TAATCATGGT CCTAGCTGTT TCCTGGGTGA ANNNACACAA CAAACAACCA CAGAAAAAAC AAGAACACAC ACAAACACAA ACACAGAAAC AACAAAACAA CACAGCAAAC ACCCACACAC AAACCAAAAA CAAACAAAAC AAACAACAAC AACAACAAAA AAAAAAAAAA ACAAAAAAAA CAGGGCGAAA GAAAAACGGG AACAGGAGAC AGGAATCAAT GCTGGGAAAA AACAGAGAGA GAGACAGGAT GAAAGGACAG GAGCAAAGAA AAAGACGGGC GCAGAGAGAC AGGGGAAAGC ATAACGGTGT GAAATAGGCG GTAAACACAC TAGGAAAAGA CACACAGAGA CAAGGACAAC GGGCGCAGAG AACAACAACA GGAACAATAC GAAAAAAAGA A // ID R25_0_000093 standard; DNA; UNC; 781 BP. XX AC R25_0_000093 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000093 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002e03.f1; XX FH Key Location/Qualifiers FH FT source 1..781 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000093_A FT misc_binding 110..143 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000093_1" FT /note="Base quality score is 2.7215e-04" FT misc_binding 143..177 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000093_2" FT /note="Base quality score is 1.5698e-04" FT misc_binding 177..210 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000093_3" FT /note="Base quality score is 1.6511e-04" FT misc_binding 210..242 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000093_4" FT /note="Base quality score is 1.9579e-03" FT misc_binding 242..275 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000093_5" FT /note="Base quality score is 3.0450e-05" FT misc_binding 275..308 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000093_6" FT /note="Base quality score is 1.2118e-04" XX SQ Sequence 781 BP; 306 A; 120 C; 217 G; 136 T; 2 other; GGATGACACG TTCACTATGG GCGAATGGGC CCTCTAGATG CATGCTCGAG CGGCGCCAGT GTGATGGATA TCTGCAGAAT TCCAGCACAC TGGCGGCCGT TACTAGTGGA TCTAGTTGTT AGGGTTTCAA GGCTATTGGT AGATCTAGGA CGTATTTTGA CCAGTTGCAA CGTTAGATCT ATGATGCTGT TGCCGTTTAG GACGCTTAGA TCTAGCATCT AGTGCCGCTG CCCAACTTTA GATCTAGGAG CCTCAGAGCG CATCTCAGAC ATAGATCTAA GGGATGGGGT TCGTTAATGG TGAATAGATC CGAGCTCGGT ACCAAGCTTG ATGCATAGCT TGAGTATTCT ATAGTGTCAC CTAAATAGCT TGGCGTAATC ATGGTCATAG CTGTTTCTGG GGTGAANNAC GAAAGAAAGA AAGTAAAGAG AAAAAGAAGA GAAGAAAAAA AGGAAGAGAA AAAAAAGAAG AAAGGGAGAA GGAAAAGAGA GTAAAAAAAA GAAGAGAAAA AAAGAAAGAA AGAAAAAAGA AAGAAAGGAG AAAAGAGAGA AGGCGCTTGG AACAACATGA AGCGCGAGGG AAGACGACTA ACACAAAGAA AGAGATACGA AGAATGTCGA CTGAGAAAAT ACGCACAAGG ACGAAAACAG TAGAAAAACG AAAGAAGCAA AGGACCGACA CATGAACATA CGAAGCTGAC CAAGAGAAGA AAGAAGGCGA CATGAAGCAA AGACGCGAGA AAATATAGAG AAGGAAGTGA ATGGCACGAA GAGAGAGACA A // ID R25_0_000094 standard; DNA; UNC; 478 BP. XX AC R25_0_000094 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000094 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002e04.f1; XX FH Key Location/Qualifiers FH FT source 1..478 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000094_A FT misc_binding 112..145 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000094_1" FT /note="Base quality score is 1.4210e-04" FT misc_binding 145..178 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000094_2" FT /note="Base quality score is 3.5674e-03" FT misc_binding 178..211 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000094_3" FT /note="Base quality score is 1.7361e-04" FT misc_binding 211..244 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000094_4" FT /note="Base quality score is 2.1020e-04" FT misc_binding 244..277 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000094_5" FT /note="Base quality score is 8.4746e-05" XX SQ Sequence 478 BP; 147 A; 94 C; 130 G; 105 T; 2 other; GTGATGTATA CGATCACTAT AGGGCGAATT GGGCCCTCTA GATGCATGCT CGGCGGCGCC AGTGTGATGG ATATCTGCAG AATTCCAGCA CACTGGCGGC GTTACTAGTG GATCTATGCC CCATGTAATG AGATACCCCC GTAGATCTAA AAGTTCTGGA GGGGTATCTT GGCCTAGATC TAGGGAGGAG GGATTTTGAT GCTACGATAG ATCTAGACAC GAGCGATTCA TGGCGTACGA TAGATCTAGC CATGGGGTAG GGAGAGAGGG TTGTAGATCC GAGCTCGGTA CCAAGCTTGA TGCATAGCTT GAGTATTCTA TAGTGTCACC TAAATAGCTT GGCGTAATCA TGGTCATAGC TGTTTCCTGT TGTGACANNA GAAGAACAAG CAAGAAAATG AACAAACAAA ACATGAAGCA ACAGGAGCAA AAGACAAAAA GAAACAAGCA CCCGACACGC TGCAACCAAA AGAAGGTG // ID R25_0_000095 standard; DNA; UNC; 742 BP. XX AC R25_0_000095 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000095 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002e05.f1; XX FH Key Location/Qualifiers FH FT source 1..742 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000095_A FT misc_binding 119..152 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000095_1" FT /note="Base quality score is 4.8275e-04" FT misc_binding 152..185 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000095_2" FT /note="Base quality score is 3.9853e-03" FT misc_binding 185..218 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000095_3" FT /note="Base quality score is 1.9292e-03" FT misc_binding 218..251 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000095_4" FT /note="Base quality score is 1.4672e-04" FT misc_binding 251..283 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000095_5" FT /note="Base quality score is 3.7433e-04" FT misc_binding 283..315 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000095_6" FT /note="Base quality score is 6.6552e-04" FT misc_binding 315..348 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000095_7" FT /note="Base quality score is 2.3227e-03" XX SQ Sequence 742 BP; 278 A; 145 C; 195 G; 124 T; 0 other; GCGTGATTGT ATAGACTCAC TATAGGGCGA ATTGGGCCCT CTAAGATGCA TGCTCGAGCG GCCGCCAGTG TGATGGATAT CTGCAGAATT CCAGCACACT GGCGGCCGTT ACTAGTGGAT CTAAAATGCG TGGAGGTGTT AGTCTTTCTA GATCTAAGCA CTCGTGACCA TCATGGCATC ATAGATCTAA CGTGGCCCGC CCCTAGGAGC TAAGTAGATC TACCTAAACC CACACATCGC GAAATGTTAG ATCTAGGGTA TATGCGCGAT TAGTTTAGTT AGATCTATCC TTGGAGCATT TGAAGAGTAT ATAGATCTAA TAAACCTATG TTCGTCTGCG ACACTAGATC CGAGCTCGGT ACCAAGCTTG ATGCATAGCT TGAGTATTCT ATAGTGTCAC CTAAATAGCT TGGCGTAATC ATGGTCATAG CTGTTTCCCC GTGAAAGAAG AGAACAAAGC AGACGCAGAC AAGAGACAAA CAACAAAAAC CAAAAACAAG AGCACAGACA AACAAACAAA CAACACAAAA CACCACAACA ACAAAACACA CAGAGGCAGA AGAGAGGCGA GAGAGCAGAG AACAGGAGAA GAGAGAGAAG AAGAGAGAGA GGAAGAGAAA GAAGAAAAAG AAGAAGAAAA GAAGCACGAG CAGAAAGACA GACAAAGAGG AGCGAGAAGG AGAGAACAAG GAGAGAGGCA AGGGGGACGG ACAAAAGAAG CGCGAACGGC AGACGAAGAG AG // ID R25_0_000096 standard; DNA; UNC; 241 BP. XX AC R25_0_000096 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000096 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002e08.f1; XX FH Key Location/Qualifiers FH FT source 1..241 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000096_A XX SQ Sequence 241 BP; 74 A; 50 C; 59 G; 57 T; 1 other; CAACAGACAC AAAAACAGCA GATGTATCGA TCACTATAGG GCGAATTGGG CCCTCTAGAT GCATGCTCGA GCGGCGCAGT GTGATGGATA TCTGCAGAAT TCCAGCACAC TGGCGGCGTT ACTAGTGGAT CCGAGCTCGG TACCAAGCTT GATGCATAGC TTGAGTATTC TATAGTGACC TAAATAGCTT GGCGTAATCA TGGTCATAGC TGTTTCCTGT GTGAAANAAA AACAAAAAAA A // ID R25_0_000097 standard; DNA; UNC; 743 BP. XX AC R25_0_000097 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000097 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002f11.f1; XX FH Key Location/Qualifiers FH FT source 1..743 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000097_A FT misc_binding 119..152 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000097_1" FT /note="Base quality score is 7.0107e-03" FT misc_binding 152..185 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000097_2" FT /note="Base quality score is 5.9452e-03" FT misc_binding 185..218 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000097_3" FT /note="Base quality score is 4.6169e-03" FT misc_binding 218..251 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000097_4" FT /note="Base quality score is 4.8007e-03" FT misc_binding 251..284 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000097_5" FT /note="Base quality score is 1.9745e-03" XX SQ Sequence 743 BP; 292 A; 181 C; 109 G; 161 T; 0 other; GACCACCATC TGGCATGTAT AGAGTCACTA TGGGCGATTT GGGCCTCTAG ATGCTGCTCG ACGGCGCAGT GTGATGGATA TCTGCAGAAT TCCAGCACAC TGGCGGCGTT ACTAGTGGAT CTAGGCGTTT CTACATCTCT AAGTACTATA GATCTAGGGC ACGCTGCAGT TGGCTGACTC TTAGATCTAA TAATTCATAA ACAGCGTTCC ACACTAGATC TAGGGGTTAC TTGCCCAGTG TCCGGCTTAG ATCTATTAAA TTACTCAGCT ATCTTCCACG TAGATCCGAG CTCGGTACCA AGCTTGATGC ATAGCTTGAG TATTCTATAG TGTCACCTAA ATAGCTTGGC GTAATCATGT CATAGCTGTT TCCTGTGTGA AAAAGCCGAG AGGATCCTCG GAGGACAACG AGGGAGAGAA AAACAAATAG TACAGCCGAA AATAAACACA TAATTATAAC ACCATCTATA ACACCACTAC AACAAACAAC AAAAAACATA TCACCCATCA CACAAACAAC AAAAAACAAA ACAACAAAAA AAAAACACAC AACCTACCAA CCATATAACA CCATACACAC CACAAACCAA ATCCATAATA AATATAAAAA AACATAAACC TGCTACTCTA AATAACAATC ATCTTAAAAA AACAATATCA AATAATAAAA AAACAAACAA TAACCCAAAA CACACCCACA TACATCCACA ATAGTCTAAT ACAAATCACA CCCAATACAA CAA // ID R25_0_000098 standard; DNA; UNC; 755 BP. XX AC R25_0_000098 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000098 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002g03.f1; XX FH Key Location/Qualifiers FH FT source 1..755 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000098_A FT misc_binding 108..140 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000098_1" FT /note="Base quality score is 1.0169e-02" FT misc_binding 140..173 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000098_2" FT /note="Base quality score is 2.3645e-02" FT misc_binding 173..206 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000098_3" FT /note="Base quality score is 3.4510e-03" FT misc_binding 206..239 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000098_4" FT /note="Base quality score is 5.0577e-03" FT misc_binding 239..272 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000098_5" FT /note="Base quality score is 7.3126e-03" FT misc_binding 272..305 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000098_6" FT /note="Base quality score is 7.9293e-03" FT misc_binding 305..338 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000098_7" FT /note="Base quality score is 2.7240e-02" FT misc_binding 338..371 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000098_8" FT /note="Base quality score is 2.7248e-02" FT misc_binding 371..404 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000098_9" FT /note="Base quality score is 1.0946e-02" FT misc_binding 404..437 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000098_10" FT /note="Base quality score is 3.7613e-03" XX SQ Sequence 755 BP; 272 A; 169 C; 154 G; 158 T; 2 other; GATAGCCCGT TAATATAGGA GAATGGGCCC TCTAGATATC ATGCTCGAGC GGCAGCAGTG TGATGGATAT CTGCAGAATT CCAGCACACT GGCGGCGTTA CTAGTGGATC TACTTCATGT ATGGGATTGG AAAGGCTAGA TCTACACCTG AACCGAGACC AACCACCAAT AGATCTACCT AAAACAACCT ATGAACCAAT CTTAGATCTA AACTGGCCGG CGGTGTTGTA TCTCGTAGAT CTACCCCGCT GAGACGCATA CAAACGCGTA GATCTATCGA TAAAACTTTG GGTGGACCAA CTAGATCTAT GAAAGTTCGA GCCTGCCGGA TCGTTAGATC TAATGTCGGG ACGGAGACCT GAGCGCCTAG ATCTAGGACT TCGTAAACGG CATCACTGTG TAGATCTATT CTGTACCCAA CCTGCAAAGT GACTAGATCC GAGCTCGGTA CCAAGCTTGA TGCATAGCTT GAGTATTCTA TAGTGTCACC TAAATAGCTT GGCGTAATCA TGGTCATAGC TGTTTCTGTG TTGAAANNAA AAAGGATAAT GACTGGCGAC TCGAGATGAG AAAAGCGAGA CAAACAAATA AATGACAGAC AGCACACAAA TCAAACAGAC TCACAAAAAC AAAGAAAAAA TAAACCGCAG AGTCACACGA AGAAACACAA CAAAACACAT AAGAACCAAC AATATCATAC ACACACATAA AACAACCAGC AAAACAACAG ACTAAAACAA AAGAATACTC AATAT // ID R25_0_000099 standard; DNA; UNC; 830 BP. XX AC R25_0_000099 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_000099 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002g05.f1; XX FH Key Location/Qualifiers FH FT source 1..830 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_000099_A FT misc_binding 119..152 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000099_1" FT /note="Base quality score is 2.2253e-03" FT misc_binding 152..185 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000099_2" FT /note="Base quality score is 2.5893e-03" FT misc_binding 185..218 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000099_3" FT /note="Base quality score is 1.6499e-04" FT misc_binding 218..251 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000099_4" FT /note="Base quality score is 1.5926e-03" FT misc_binding 251..284 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000099_5" FT /note="Base quality score is 1.1837e-02" FT misc_binding 284..317 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000099_6" FT /note="Base quality score is 2.3300e-02" FT misc_binding 317..350 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000099_7" FT /note="Base quality score is 2.0545e-02" FT misc_binding 350..383 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000099_8" FT /note="Base quality score is 1.1153e-02" FT misc_binding 383..416 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_000099_9" FT /note="Base quality score is 1.2007e-01" XX SQ Sequence 830 BP; 306 A; 210 C; 139 G; 175 T; 0 other; ACGATTGATA GTAATAGAAT CATATAGGGT GAATAGGGCC CGTCTAGATG CATGCTCAGC GGTCGCAGTG TGATGGATAT CTGCAGAATT CCAGCAGCAC TGGCGGCGTT ACTAGTGGAT CTATGCCTCA GATGAACAGA CTCAATACTA GATCTAGTAT TGGCCCGAAA CACTCCGGGA TTAGATCTAG CCAGTATGGG CGGGGGAGAC TAGTTAGATC TAAAGATCGC ATCTCAACAT TGTGCCATAG ATCTACGAGA GTAGTTATTC GCACCGTAAC TAGATCTACT CCCGCGAGTT CTGGTAAGTT CCATAGATCT ACACGCACCC CGGCTCCTGA ATGTGCTAGA TCTAGGCTTT TGGCCCAAGT CGCCTCGCTT AGATCTAATC TATAATCTCG CTCCGCCCGC CGTAGATCTA GTATCTGCAC AGCACACACC TACTTAGATC CGAGCTCGGT ACCAAGCTTG ATGCATAGCT TGAGTATTCT ATAGTGTCAC CTAAATAGCT TGGGGTAATC CTGGTCCTAG CTGTTCCGTG GTGAACAACC CGAGGGAACC ACCCCTTACA CCACAACAAA CTACACACAA TCTAACACAC AAACCAACAA AAAACAACAT AAATAAACAA ACAAACATAA AACAAAAATA AAAAAACACA ATATCAACAA CCAAACACAA ACTAACACCA CAATAAAACA AAACTAAAAT AACAAAACAA CAAAAAAACA AAACACACAT GCAAAGTAAC TAGAAAACAC TAATCAAAAC ATAATCAAAA TAACTATCTC ATTAATATCA AGACCACACA ATCACGCCAC CAAAACCACA // ID R25_0_0000100 standard; DNA; UNC; 240 BP. XX AC R25_0_0000100 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000100 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002g06.f1; XX FH Key Location/Qualifiers FH FT source 1..240 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000100_A XX SQ Sequence 240 BP; 61 A; 56 C; 63 G; 59 T; 1 other; ACAGAAACCG CATGATGANA CGATCACTAT AGGGCGAATT GGGCCCTCTA GATGCATGCT CCGCGGCGCC AGTGTGATGG ATATCTGCAG AATTCCAGCA CACTGGCGGC CGTTACTAGT GGATCCGAGC TCGGTACCAA GCTTGATGCA TAGCTTGAGT ATTCTATAGT GTCACCTAAA TAGCTTGGCG TAATCATGGT CATAGCTGTT TCCTGTGTGA CAATCTCGAA AGCGAACGGA // ID R25_0_0000101 standard; DNA; UNC; 429 BP. XX AC R25_0_0000101 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000101 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002g07.f1; XX FH Key Location/Qualifiers FH FT source 1..429 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000101_A FT misc_binding 112..145 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000101_1" FT /note="Base quality score is 3.7568e-02" FT misc_binding 145..178 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000101_2" FT /note="Base quality score is 1.0502e-03" FT misc_binding 178..211 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000101_3" FT /note="Base quality score is 3.8358e-03" FT misc_binding 211..244 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000101_4" FT /note="Base quality score is 2.6166e-03" FT misc_binding 244..277 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000101_5" FT /note="Base quality score is 4.2103e-03" XX SQ Sequence 429 BP; 145 A; 87 C; 92 G; 104 T; 1 other; TAGATGCAAA GATTTACTAT GGGTGAATGG GCCCTCTAGA TGCATGTCTA CGCGGCGCAG TGTGATGGAT ATCTGCAGAA TTCCATGCAC ACTGGCGGCC GTTACTAGTG GATCTACCGA CCGCTAGATA GCACTACTTC ATAGATCTAT GAGCCAGGTC GTCTAGGGAA AAGTTAGATC TAATGACATG GGCCCCGGTG TTTGGTATAG ATCTACACCT AACTACAACA TTCGTAAACA TAGATCTACT ACACCATACT TCAACGCCCT CGATAGATCC GAGCTCGGTA CCAAGCTTGA TGCATAGCTT GAGTATTCTA TAGTGTCACC TAAATAGCTT GGCGTAATCA TGGTCATAGC TGTTTCCTGT GTGAACNAAA AAAATAAAAA AAGAAAAGAA AAACAGAAAA GAAAAAAGAA AAGAAAAAA // ID R25_0_0000102 standard; DNA; UNC; 755 BP. XX AC R25_0_0000102 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000102 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002g11.f1; XX FH Key Location/Qualifiers FH FT source 1..755 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000102_A FT misc_binding 119..152 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000102_1" FT /note="Base quality score is 2.2450e-03" FT misc_binding 152..185 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000102_2" FT /note="Base quality score is 3.3021e-04" FT misc_binding 185..218 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000102_3" FT /note="Base quality score is 5.5103e-04" FT misc_binding 218..251 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000102_4" FT /note="Base quality score is 4.9239e-04" FT misc_binding 251..284 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000102_5" FT /note="Base quality score is 3.1518e-03" XX SQ Sequence 755 BP; 332 A; 185 C; 96 G; 142 T; 0 other; AAACAAAAAA AAAAGATGAT AGAAAGTTAT ATGGAGAATG AGCCCTCTAA TGCATGTCTA GCGGCGCAGT GTGATGGATA TCTGCAGAAT TCCAGCACAC TGGCGGCGTT ACTAGTGGAT CTAAGAACTA TGCATTAAGC CCAAAAACTA GATCTAATTT ATTTGGACGC ACGAGGTGTC TTAGATCTAT ACCGTTACAT GGGCTGCCGC CCCCTAGATC TACTACGAGC CCCCTCCCAG TCGGGATTAG ATCTAACAAC ATCCATCGAA ACATCTAGCA TAGATCCGAG CTCGGTACCA AGCTTGATGC ATAGCTTGAG TATTCTATAG TGTCACCTAA ATAGCTTGGC GTAATCATGG TCATAGCTTG TTCTTGTGTG AAATGGCAGA GAGGAAACAG AAATAAAGAC CACCAGTCAT CAACAAGTTC AAATACATAC AACATAATAC ACAACATACA CACAACACAT AAACACAAAC AAACACATAC ACTAATCAAA CACAAAACAA TAACAAACAA ACATCATACA AACACATAAA ATCATAACAC ATAACCATAA AAAAAATCAA CAATCAAAAC ATCAAACAAC TCAAATAAAA AAAAACCAAA AAAAATCACA AACTCACAAC AACCAACACC CAGACAATAA CACACTACAA AACAAGACAC TAAATACAAC TAAAAACACA AACCAAAACA CTCACAGAAA ACTCATAAAC ACAACATCAC ACACATCAAA CACACAATAC CACTC // ID R25_0_0000103 standard; DNA; UNC; 906 BP. XX AC R25_0_0000103 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000103 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002h01.f1; XX FH Key Location/Qualifiers FH FT source 1..906 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000103_A XX SQ Sequence 906 BP; 349 A; 198 C; 166 G; 191 T; 2 other; GGAAACACAA GCAGGACTAG AACGATTCAC ATAGGGCGAA TTGGGCCCTC TAGATACATG CTCAGCGGCG CCAGTGTGAT GGATATCTGC AGAATTCCAG CACACTGGCG GCCGTTACTA GTGGATCTAT TGAGCCATAG GTGTGTAACG GATGTTAAAA TTATCCTCGT TATATAGTTA ATGTTCCCGT AAATCAATAG AATGATAGGT ATCTGCTAAA TGTAAATCAA CCTGGCTATT ATAGTTCGAT TGCGGTTAAA ATCTATTCCA TCTTAAGGTG GGTGGTGGCT TAAACTTAAC TTTAATGCGA ATCGAACGAA CCTATGAATT CAATTATTTA TGTATGGAAC CAGTTTGTGT AATCCAGAGT CTCGAACCAG GTCTGAGATG TGCATAGCTG AGTTATTTCT ATATGGTACC CCAAATATAG CTGGGGTGAA ACCATGGTTC ATAGTCTTTT TTCCCTGTGT AATGATNGCA TCACACACAG AAATACAAAA ACAATAAACA CACACAAAAA ACACAAACAA ACACAAACAA CAACAACCAC CAAAAACTAT AACATCAAAA CAAACACACA AACTACAAAC AGAAAACAAA CGCACACACA CACATCGAGA GAGTCATGAA TAATGCACAA CCATCTCACC AGGGCAAAAC ATATAGCACA AAGCATCCAA ATCACTCATG ATTCATGCAC AACTACAAAA GTAATGAAAA TCAAGCCAAG AAGAACATAT CACGACGAAG CTCGACAATC GAAACAGCAT AGCACCTAAG AGATAAAAGT ACCACTCAAT AAGAGAGTAT TCAGCAGACG CAAATCACCC AGTGGCAGAG CCAGTATGAA GCAAACACGC AATCCATCAA CAAAGAACGA GAGGACAGCA ACGAGAACGC GGCAAN // ID R25_0_0000104 standard; DNA; UNC; 793 BP. XX AC R25_0_0000104 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000104 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002h02.f1; XX FH Key Location/Qualifiers FH FT source 1..793 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000104_A FT misc_binding 127..160 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000104_1" FT /note="Base quality score is 3.9481e-02" FT misc_binding 160..194 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000104_2" FT /note="Base quality score is 1.8710e-03" FT misc_binding 194..227 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000104_3" FT /note="Base quality score is 3.9923e-04" FT misc_binding 227..260 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000104_4" FT /note="Base quality score is 1.6839e-04" FT misc_binding 260..293 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000104_5" FT /note="Base quality score is 2.1128e-03" FT misc_binding 293..326 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000104_6" FT /note="Base quality score is 6.2162e-04" XX SQ Sequence 793 BP; 324 A; 163 C; 176 G; 130 T; 0 other; AGGCCGTGAA AAGAGTGATA GATAGATTCA CTATAGGGCG AATTGGGCCC TCTAGATGCA TGCTCGAGCG GCGCCAGTGT GATGGATATC TGCAGAATTC CAGCACACTG GCGGCGTTAC TAGTGGATCT AGCTCAGCCC TACTCTATCC GTCCTTTAGA TCTAAGAGGA GTACACTCAC TCCTTCAGCA TAGATCTAAA GGACTTATAT AGTGTGGCAC TCGTAGATCT AAGAAAATTG GGGGGTGCTG AGTCCATAGA TCTAGCGCTG AATGGAGCGC TGTATGCTTT AGATCTATAT CCATCATTCC CCAATCAGCC TGTAGATCCG AGCTCGGTAC CAAGCTTGAT GCATAGCTTG AGTATTCTAT AGTGTCACCT AAATAGCTTG GCGTAATCAT GGTCCTAGCT GGTTCCCTGG TGTGAAGGAC AAAACACGGC CGATAGTAGA CACAGAGAAA AACCCTGGCG AAAATAAACA GAAAAAAAAC AGAAAAAAAA AAAAAAAAAA CACAAACAAA CACAAAACAA CAAAGCAACA CAAACAAACA AAGAAACAAC AAAACCAACA CAAACACGAA GCAACACAAA AAGTAAACAG ACAGGAAGAT ACAGAGAGAG AGAATAGAAG AACGAGAAAG AAGATAGAGA GGGAGAGAGA GAAACAACGA AAGCAAAAAG CAAAAAAGAG AAAAGAGAAA TACACGCGAC ACAGACACGA GCGGAAAGAA AACAGCAGTA ATACACACGC AAAACCATAC CGACGAAACA GCCACAGGAT GAGAAAATAC AAG // ID R25_0_0000105 standard; DNA; UNC; 600 BP. XX AC R25_0_0000105 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000105 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002h03.f1; XX FH Key Location/Qualifiers FH FT source 1..600 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000105_A FT misc_binding 120..154 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000105_1" FT /note="Base quality score is 7.8554e-02" FT misc_binding 154..188 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000105_2" FT /note="Base quality score is 6.5796e-02" FT misc_binding 188..224 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000105_3" FT /note="Base quality score is 9.6013e-02" FT misc_binding 224..258 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000105_4" FT /note="Base quality score is 7.9570e-02" FT misc_binding 258..292 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000105_5" FT /note="Base quality score is 1.6905e-02" FT misc_binding 292..325 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000105_6" FT /note="Base quality score is 7.3538e-02" FT misc_binding 325..358 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000105_7" FT /note="Base quality score is 6.8184e-02" FT misc_binding 358..391 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000105_8" FT /note="Base quality score is 2.7229e-02" XX SQ Sequence 600 BP; 167 A; 134 C; 149 G; 150 T; 0 other; GATGCGTGAT GTATAGATCA CTATAGGGCG AATTGGGCCC TCTAGATAGC ATGCTCGAGC GGCCGCCAGT GTGATGGATA TCTGCAGAAT TCCAGCACAC TGGCGGCCGT TACTAGTGGA TCTATATTCT TGCGTGGTGA AGTGGTGTAT TAGATCTACC GCGATGGGTC TGGACTTCTC ACAATAGATC TATGCATCAA CCCGCAGCAA ACTGGGACCT AGAATCTAAC GTTCCGAGTA GCAAGCTGTA TCGTTAGATC TTATATGTCA ATTCTCTCAA CCTGCCCGTA GATCTATCTT CAGTTTCCAG CGGTCGATCG CTAGATCTAG AGCGAGGTAC GGGCTGCGGT GATGTAGATC TACGTACGGC TGATTCTTGC TCTAGGTTAG ATCCGAGCTC GGTACCAAGC TTGATGCATA GCTTGAGTAT TCTATAGTGT CACCTAAATA GCTTGGGGTA ATCTTGGTCA TAGCTGTTTC TGTGTTAAAC CGGCAAACCC TGGGCGGTCG GGAATTGGAA AACCCTGGGG AGAAATAAAA CGAACAACAC TCAACGAAGC AAAACAAAAG AAACAACGAC ACAAACACAA CCAACAAAGA // ID R25_0_0000106 standard; DNA; UNC; 241 BP. XX AC R25_0_0000106 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000106 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002h07.f1; XX FH Key Location/Qualifiers FH FT source 1..241 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000106_A XX SQ Sequence 241 BP; 60 A; 56 C; 65 G; 60 T; 0 other; CGCCTGAACA CCGCAGATGA TACGACTCAC TATAGGGCGA ATTGGGCCCT CTAGATGCAT GCTCGACGGC GCCAGTGTGA TGGATATCTG CAGAATTCCA GCACACTGGC GGCCGTTACT AGTGGATCCG AGCTCGGTAC CAAGCTTGAT GCATAGCTTG AGTATTCTAT AGTGTCACCT AAATAGCTTG GCGTAATCAT GGTCATAGCT GTTTCCTGTG TGACATGGTA AAGCAAGGAA G // ID R25_0_0000107 standard; DNA; UNC; 233 BP. XX AC R25_0_0000107 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000107 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002h08.f1; XX FH Key Location/Qualifiers FH FT source 1..233 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000107_A XX SQ Sequence 233 BP; 63 A; 48 C; 57 G; 57 T; 8 other; GAGNNNNNNN NCGCGGGGAA GCTGCAGTAA TTGTATACGA TTCACTATAG GGCGAATTGG GCCCTCTAGT ATCATGCTCT AGCCGGCGCC AATTGTGATA GATATCTAGC AGAATTCCAG CACACTGGCG GCCGTAACTA GTGGATCCAA GCTCGGTAAA GCTTGATGCA TCCGTTAGAG TAATACTATA GGTGTCACCT AAAATTAGCT TAGCGGTAAA TCCTAAGTCA TAG // ID R25_0_0000108 standard; DNA; UNC; 787 BP. XX AC R25_0_0000108 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000108 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002h09.f1; XX FH Key Location/Qualifiers FH FT source 1..787 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000108_A FT misc_binding 121..154 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000108_1" FT /note="Base quality score is 7.6161e-04" FT misc_binding 154..187 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000108_2" FT /note="Base quality score is 3.5723e-04" FT misc_binding 187..220 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000108_3" FT /note="Base quality score is 9.1191e-05" FT misc_binding 220..252 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000108_4" FT /note="Base quality score is 1.4209e-04" FT misc_binding 252..285 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000108_5" FT /note="Base quality score is 1.2965e-04" FT misc_binding 285..318 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000108_6" FT /note="Base quality score is 2.6490e-03" FT misc_binding 318..351 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000108_7" FT /note="Base quality score is 4.4993e-02" FT misc_binding 351..384 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000108_8" FT /note="Base quality score is 5.7233e-04" FT misc_binding 384..417 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000108_9" FT /note="Base quality score is 4.8090e-03" FT misc_binding 417..450 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000108_10" FT /note="Base quality score is 1.0850e-02" FT misc_binding 450..483 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000108_11" FT /note="Base quality score is 7.7954e-03" XX SQ Sequence 787 BP; 229 A; 203 C; 182 G; 167 T; 6 other; GGCAGTGAAT TGATACGACT CACTATAGGG CGAATTGGGC CCTCTAGANT GCATGCTCGA GCGGCGCCAG TGTGATGGAT ATCTGCAGAA TTCCAGCACA CTGGCGGCCG TTACTAGTGG ATCTAGAGTC CTCCAACTCT CTTACCCACA TAGATCTACT GTCCGATCTA GGTCAAGAGT GCCTAGATCT ATTGAGCTGA GACGCACAAG GGTAATTAGA TCTAGAGGCT CGAGGGGGGT CGTCTAGGTA GATCTATGGG GCACTGACTC GTAATAATTG GTAGATCTAC GATTATCGCA AGTGGACCCG CCGATAGATC TATGAAATCG AGGAGCCAGG GCCAGGTTAG ATCTAGATGA AACTCAGACT CTCCGCGTAA TAGATCTAGT GGGGTCCCGA AACAACACTC TGGTAGATCT AATGAGGACC GATCAATACG TGTAGCTAGA TCTATCTCAA CACAATCATC CTAACCCAAT AGATCCGAGC TCGGTACCAA GCTTGATGCA TAGCTTGAGT ATTCTATAGT GTCACCTAAA TAGCTCGGGG TNGAACTCCG TCTTTGTCTT TCGCGTGATG AAACNACNNN CAGCAACAGA CCCCTAACAC TACAACTAGC AAGCCCGCCA CATACACATA TCACGCATCA GCCAGGCCTA CGAGACTGAC CAACACAACT CAATATAGTG TTCGCAACAG CCACTACCAC AGAGCGACAT CGCAAGCTGA GAGACACTCG ACGACACAAG CAGATAGCAA CGAGACAACC AGAGGACACG CATCCTC // ID R25_0_0000109 standard; DNA; UNC; 960 BP. XX AC R25_0_0000109 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000109 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x002h12.f1; XX FH Key Location/Qualifiers FH FT source 1..960 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000109_A XX SQ Sequence 960 BP; 403 A; 212 C; 254 G; 91 T; 0 other; CACCGGTTGA ACGCTGTGAT TGTATACGAT TCACTATAGG GCGAATTGGG CCCTCTAGAT GCATGCTCGA GCGGCGCCAG TGTGATGGAT ATCTGCAGAA TTCCAGCACA CTGGCGGCCG TTACTAGTGG ATCCGAGCTC GGTACCAAGC TTGATGCATA GCTTGAGTAT TCTATAGTGT CACCTAAATA GCTTGGCGTA ATCATGGTCA TAGCTGTTTC CTGTGTGAAA CGGCCGCGAG GGTTCGCCCA GCAACGAGCG AGAGAAATCA AACAGATCCA GACACGTAAA GAGGAAGACA AAGAAGAAAC AAAAAGCGAG ACGTCATAAA CCACAACAAA ACCGACCCAC ACAAAAAAAA AAGACAAAAC AACCAACACA ACAACACAAA CAATAACGAC ATCCAACAAA ACAACGAATA GACAAACAGA AAAAACACAA AACACACCCA TAGAAAGGAC TGACGAGACA GAGACGAGAA TCACAGCCGA GGATACGCGA GAACCCAAGA GAGAGAGGCT AAAGACGACA TGAGCAGAAA GTGAGAAGGA AGAGAGAAGA AGAGAAACGA ACGGAGAGGA AGACCACACC GAAACAGAAG AGACGACGAA GCGAAGAGGC AAAGACGAAC GACAAAGCGC GAGACGAGCA CAGAAGACAG AAAAGCACAG AAACAGGAAG CAGAAAAACA ACGACAGCAC GCGGAGCGGG AGTGAGTGAG CTAAGAACGA AACAGAGAGG GCAGCGCTCA AGTCATAGCA CGACAACACG CGCGGAAATA GATCTAAACA GGCGAGACCA GGAGACAGAC CGAGCAAGAA GGCGAAGAGA GCGAAAAGAA GACACCAGAG AAACAAAAGC CGGCATAGCA CACAAACAAG CGCAGCCAGA CAGAGAAGAA AGGAAGAAGA GGACAGGAAA GCGAGGAGAC GAAACAGACG CAGCCACAGA ACAAAAGAGC // ID R25_0_0000110 standard; DNA; UNC; 426 BP. XX AC R25_0_0000110 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000110 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003a01.f1; XX FH Key Location/Qualifiers FH FT source 1..426 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000110_A FT misc_binding 118..151 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000110_1" FT /note="Base quality score is 1.5555e-04" FT misc_binding 151..184 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000110_2" FT /note="Base quality score is 1.4305e-04" FT misc_binding 184..217 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000110_3" FT /note="Base quality score is 5.3573e-05" FT misc_binding 217..250 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000110_4" FT /note="Base quality score is 3.9104e-05" FT misc_binding 250..283 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000110_5" FT /note="Base quality score is 4.1150e-05" FT misc_binding 283..316 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000110_6" FT /note="Base quality score is 1.5549e-04" XX SQ Sequence 426 BP; 115 A; 75 C; 104 G; 130 T; 2 other; AGCGTAATAA GCAGGAATGT ATTACGACTC ACTATAGGGC GAATTGGGCC CTCTAGATGC ATGCCGAGCG GCCGCAGTGT GATGGATATC TGCAGAATTC CAGCACACTG GCGGCGTTAC TAGTGGTATT TGAGGGTTGC TTTATATTAG ATCTATGTTA GTGTATATTG TGAGGGACCT TAGATCTATT CTTAATGGCT GTGGTGATGT TTATAGATCT AAGAAATAAT ATAACGGCAG CCATTGTAGA TCTAAAATCT GGTTTCGGGG TAGCTATCAT AGATCTAATC CAATTTCGAT CTTTCAAAAA AGTAGATCCG AGCTCGGTAC CAAGCTTGAT GCATAGCTTG AGTATTCTAT AGTGTCACCT AAATAGCTTG GCGTAATCAT GGTCATAGCT GTTTCCCGGT GAGNNGTAAT ACCCGA // ID R25_0_0000111 standard; DNA; UNC; 584 BP. XX AC R25_0_0000111 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000111 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003a03.f1; XX FH Key Location/Qualifiers FH FT source 1..584 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000111_A FT misc_binding 118..151 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000111_1" FT /note="Base quality score is 2.6405e-04" FT misc_binding 151..184 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000111_2" FT /note="Base quality score is 7.5241e-04" FT misc_binding 184..217 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000111_3" FT /note="Base quality score is 6.4670e-05" FT misc_binding 217..250 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000111_4" FT /note="Base quality score is 5.4522e-04" FT misc_binding 250..283 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000111_5" FT /note="Base quality score is 1.9766e-03" FT misc_binding 283..316 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000111_6" FT /note="Base quality score is 2.8251e-03" FT misc_binding 316..349 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000111_7" FT /note="Base quality score is 6.2447e-04" FT misc_binding 349..381 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000111_8" FT /note="Base quality score is 3.1372e-04" FT misc_binding 381..414 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000111_9" FT /note="Base quality score is 3.1612e-04" XX SQ Sequence 584 BP; 156 A; 137 C; 144 G; 147 T; 0 other; GGGCAGTGAT TGATACATAC ACTATAGGGC GAATCGGGCC CTCTAGATGC ATGCTCGAGC GGCGCCAGTG TGATGGATAT CTGCAGAATT CCAGCACACT GGCGGCGTTA CTAGTGGATC TAATCAAGCG TTGAGAGTAA TAGAATGTAG ATCTACCCAC TCTGCTCTAA TCCCTCCCCT TAGATCTATA TAAACCTGGG AACTGCACAT CGATAGATCT AGGACGGGAA CTTGCGTAGG AGCCCATAGA TCTAGGAATT TAGGGGGATG AGGTTTGGTT AGATCTATTG GCTTTCCTGT ACCGCCGGAT CCTAGATCTA GCCCCAGCGG GCTTGAGTTG AGAAGTAGAT CTATTGCGCG CCACTATGAC CGTTCTGTAG ATCTACGGCT ACTAGTGCTC AATAAACAAA TAGATCCGAG CTCGGTACCA AGCTTGATGC ATAGCTTGAG TATTCTATAG TGTCACCTAA ATTGCTTGGC GTAATCATGG TCATAGCTGT TCCTGGGTTG AAACCGGCTA CCCCCCAAAC AATTCCCAAA CAATATACAA CGCCGGAACA TTACAGGAGC AACGCCTGGA GTGA // ID R25_0_0000112 standard; DNA; UNC; 685 BP. XX AC R25_0_0000112 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000112 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003a10.f1; XX FH Key Location/Qualifiers FH FT source 1..685 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000112_A FT misc_binding 120..153 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000112_1" FT /note="Base quality score is 1.6666e-04" FT misc_binding 153..186 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000112_2" FT /note="Base quality score is 7.2658e-05" FT misc_binding 186..219 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000112_3" FT /note="Base quality score is 8.5244e-05" FT misc_binding 219..252 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000112_4" FT /note="Base quality score is 1.7604e-04" FT misc_binding 252..285 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000112_5" FT /note="Base quality score is 7.3305e-05" FT misc_binding 285..317 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000112_6" FT /note="Base quality score is 3.6596e-04" FT misc_binding 317..350 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000112_7" FT /note="Base quality score is 3.1924e-04" FT misc_binding 350..383 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000112_8" FT /note="Base quality score is 5.4204e-05" FT misc_binding 383..416 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000112_9" FT /note="Base quality score is 1.3763e-04" FT misc_binding 416..449 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000112_10" FT /note="Base quality score is 5.6374e-04" XX SQ Sequence 685 BP; 193 A; 204 C; 122 G; 166 T; 0 other; TAAGGCAGTG ATTGTATACG CTCACTATAG GGCGAATTGG GCCCTCTAGA TGCATGCGAG CGGCGCCAGT GTGATGGATA TCTGCAGAAT TCCAGCACAC TGGCGGCCGT TACTAGTGGA TCTATAGTAA CAGCCGAGCA CTCATTTCAT AGATCTAGGC AGACCACCTT ACCCAAACAA ATTAGATCTA AGCTTCCGAA TTGGGAGGCA TTTTCTAGAT CTAACCTTCC ATCGAGGCAT TACACCAGTA GATCTAGATG GTGACTAGCT CTGTATGAAG TTAGATCTAA ACCCGAATAG CCAAGCCTCT ACCTAGATCT AGATTTAAAT GATATTTTAC AGCCGTTAGA TCTATAATAT TGTCCAACGC AGTCGCCTGT AGATCTATTG CCCAAGTCAG GACATAAATA TGTAGATCTA TTGAGTACCT GGCCTTCTTG CCAACTAGAT CCGAGCTCGG TACCAAGCTT GATGCATAGC TTGAGTATTC TATAGTGTCA CCTAAATAGC TTGGCGTAAT CTTGGCCTTA GTCTGTTCGT TGGAAAAAGT TACCACACAC TTCCACCCCA CACTTCCCGA ACCACCACAA CCACCCATCA CACCACACCC ACCGCCTCCC ACCACACACC GCCACCCCAC CACCCCATAT CACATCCACT ACCCCAACCC CCACACCCCA CCAAC // ID R25_0_0000113 standard; DNA; UNC; 861 BP. XX AC R25_0_0000113 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000113 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003a12.f1; XX FH Key Location/Qualifiers FH FT source 1..861 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000113_A FT misc_binding 118..151 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000113_1" FT /note="Base quality score is 2.2301e-04" FT misc_binding 151..184 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000113_2" FT /note="Base quality score is 1.6120e-03" FT misc_binding 184..217 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000113_3" FT /note="Base quality score is 4.5557e-05" FT misc_binding 217..250 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000113_4" FT /note="Base quality score is 2.8701e-04" FT misc_binding 250..283 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000113_5" FT /note="Base quality score is 1.3751e-03" FT misc_binding 283..316 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000113_6" FT /note="Base quality score is 2.3595e-03" FT misc_binding 316..349 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000113_7" FT /note="Base quality score is 1.3634e-03" FT misc_binding 349..382 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000113_8" FT /note="Base quality score is 6.8347e-03" XX SQ Sequence 861 BP; 309 A; 184 C; 208 G; 159 T; 1 other; GGCAGATGTA TACGACTCAC TATAGGGCGA ATTGGGCCCT CTAGATGCAT GCCCGAGCGG CCGCCAGTGT GATGGATATC TGCAGAATTC CAGCACACTG GCGGCCGTTA CTAGTGGATC TAGCAGACAT ATTCTGAAAA CGAGGTGTAG ATCTACGGTT CCACAGCAGG CTCCCCCTGC TAGATCTATC TAGTCGGTCC AAGTTGTGTT TGCTAGATCT AAACCGGGGG TAGTGGTGTG TGAAGCTAGA TCTAAACATC GTCTCCGTAC CGCCGGCGTT AGATCTACGT GGGTTCCGGG CAACATGGAT AATAGATCTA GGACCTCACA TTACGCCTAT ATGAATAGAT CTAAATCTAA AAATTGCGCG TGTACCATTA GATCCGAGCT CGGTACCAAG CTTGATGCAT AGCTTGAGTA TTCTATAGTG TCACCTAAAT AGCTTGGCGT AATCATGGTC CTAGCTGTTT TCCTCGTTGT GAANAAACAA AAGAAACAAA ACGACAAAAC TCAAACACCA CAACAAAAAC AAAACAAACA ATACACAATC ACACACCACA CAACACATGA AACAGACACA AACAAACAAA ACACACACAA AACGATAGGA AGAGGGAAGG CGCGAAGAAA AACGAAGGCA AAGACGCGCG GGATAAAGGA GAAGCCGAAA CGGCAGATAG AAGACAAAGC AACGCGAGAC TCGAGAGCAA TAGAAATCGA TAAAGTGAGG AGAAAAAAAT AGAGAGCTAC AGCAATGAGA AAGACATGAT AAGATGATAG GAGCAGAGGA TGTGGCGTAG ACAACGCAAC AAGAAGTGAA TGAAGGGAAC GATGCTTACG TAGAGAAGAC AGCAATCCGC C // ID R25_0_0000114 standard; DNA; UNC; 757 BP. XX AC R25_0_0000114 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000114 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003b03.f1; XX FH Key Location/Qualifiers FH FT source 1..757 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000114_A FT misc_binding 119..152 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000114_1" FT /note="Base quality score is 6.7605e-04" FT misc_binding 152..185 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000114_2" FT /note="Base quality score is 1.3744e-04" FT misc_binding 185..218 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000114_3" FT /note="Base quality score is 5.9719e-04" FT misc_binding 218..251 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000114_4" FT /note="Base quality score is 3.4962e-04" FT misc_binding 251..284 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000114_5" FT /note="Base quality score is 7.1630e-04" FT misc_binding 284..317 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000114_6" FT /note="Base quality score is 2.3873e-04" FT misc_binding 317..350 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000114_7" FT /note="Base quality score is 1.1876e-03" FT misc_binding 350..383 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000114_8" FT /note="Base quality score is 3.7758e-03" XX SQ Sequence 757 BP; 292 A; 185 C; 144 G; 134 T; 2 other; CGCGCGGATG TATACGACTC ACTATAGGGC GAATAGGGCC CTCTAGNATG CATGTCGAGC GGCGCCAGTG TGATGGATAT CTGCAGAATT CCAGCACACT GGCGGCCGTT ACTAGTGGAT CTAGAGATAA GCCTCGTAGT GTTTAGATTA GATCTAATAC ACTTATGAAC GCGAATGATG CTAGATCTAT GCATGACTGC GCCTCAGCGC TTGGTAGATC TACCTCATGC GCCAGAACCT AGTACCTTAG ATCTATACCG TGTGGCAATG GCTGATGTCT TAGATCTACG TCGGGGCCAA CCATCACAAA TATTAGATCT AGCCCATCAC AGATCCGGCC CGCCCCTAGA TCTAAATCAT TTTCTACTTT TAAGACCCTT AGATCCGAGC TCGGTACCAA GCTTGATGCA TAGCTTGAGT ATTCTATAGT GTCACCTAAA TAGCTTGGCG TAATCATGGT CATAGCTGTT TCCTGTGTTG ACANGGTCCA CAGACAAAAG AAAACAGCAA GAAAGAGAAA CACAAAGAGA AAAAAAACAC AAAAAAAAAG AAACGAAACA AAGCACGCAC ACAAAGAAGA AAAGAAGCAC ACACCACGAA CACAACAAAG ATGAGAGAAG AACAACACAC GACCACCACA AAAACAGAAA GAAACGAAAC ACAACACAGA AACAAACAAC AAACAACACA CAACAAACAC ACACAAAGCA CAAACACACA ACAAAAAACA AAACAACACA CACAGCAGAA GACAACA // ID R25_0_0000115 standard; DNA; UNC; 408 BP. XX AC R25_0_0000115 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000115 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003b07.f1; XX FH Key Location/Qualifiers FH FT source 1..408 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000115_A FT misc_binding 125..158 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000115_1" FT /note="Base quality score is 4.2662e-04" FT misc_binding 158..191 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000115_2" FT /note="Base quality score is 2.5258e-04" FT misc_binding 191..224 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000115_3" FT /note="Base quality score is 5.6275e-03" FT misc_binding 224..257 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000115_4" FT /note="Base quality score is 2.5480e-02" FT misc_binding 257..290 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000115_5" FT /note="Base quality score is 2.1320e-02" XX SQ Sequence 408 BP; 111 A; 88 C; 105 G; 102 T; 2 other; ACAGAGAAAC AGCAGGATGT ATACGACTCA CTATAGGGCG AATTGGGCCC TCTAGATGCA TGTCGAGCGG CGCAGTGTGA TGGATATCTG CAGAATTCCA GCACACTGGC GGCGTTACTA GTGGATCTAT GTATAACTAG GCCCTTGGAT GAAATAGATC TAATATTCAC GTATCACCAG CCGCCCGTAG ATCTAGGCGG GGGGGGCCCG CCATTTAATG TAGATCTACT AGCCCGTGAC ATCCCTCTAT ATTTAGATCT AGACGAAGAG GTTGTATCGC GTTACTTAGA TCCGAGCTCG GTACCAAGCT TGATGCATAG CTGGAGTATT CTATAGTGTC ACCTAAATAG CTGGGCGTAA TCATGGTCAT AGCTGTTTCC TGTGTGAAAN GGNGAAAGAA CACAAAAC // ID R25_0_0000116 standard; DNA; UNC; 634 BP. XX AC R25_0_0000116 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000116 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003b09.f1; XX FH Key Location/Qualifiers FH FT source 1..634 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000116_A FT misc_binding 162..197 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000116_1" FT /note="Base quality score is 1.0654e-01" FT misc_binding 197..231 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000116_2" FT /note="Base quality score is 6.6777e-02" FT misc_binding 231..264 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000116_3" FT /note="Base quality score is 9.0808e-03" FT misc_binding 264..297 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000116_4" FT /note="Base quality score is 2.7020e-03" FT misc_binding 297..330 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000116_5" FT /note="Base quality score is 3.0517e-02" FT misc_binding 330..364 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000116_6" FT /note="Base quality score is 9.3861e-02" FT misc_binding 364..397 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000116_7" FT /note="Base quality score is 2.1906e-02" XX SQ Sequence 634 BP; 212 A; 136 C; 142 G; 143 T; 1 other; GGAGAACAAG GCAGGAATGT ATAGACTTAC TATAGGGCGA ATTGGGCCCT CTAGATGCAT CTCGAGCGGC GCCAGTGTGA TGGATATCTG CAGAATTCCA GCACACTGGC GGCCGTTACT AGTGGATCTA TTGTTAATGA GTGGGAAATA TTTACTTTTA GATCTATGGA TAATACCTGA AATCTCTTGG AGTTAGATCT ATGGGTCAGT GTATGGGATG GTCGGTTTAG ATCTAGCTCA GAAGCTGCAC ACAGACCCCA TAGATCTATT TGACGGGCAG TAGGGGGGAT CGATAGATCT ATCGAGCGGT AATAGCAGGC GCGTTCTAGA TCTACATATG ATAAGACCGT GACAACCTAT AAGATCTACA AAGCGCTTCT AAACGTTAAC ATATAGATCC GAGCTCGGTA CCAAGCTTGA TGCATAGCTT GAGTATTCTA TAGTGTCACC TAAATAGCTT GGCGTAATCA TGGTCATAGC TGTTTCCTGG TTGAAAGGNA TAACACAAAC ACAAACCAAC CGAAATGACG AAACAACACA AACAACCCGA CCTATCCCGC AGCACGACAA GAGAAGCAAC ACAAAACAAC AGAATACACA ACAAAAGCAA GACACACACA CCAAACAAAT CAAC // ID R25_0_0000117 standard; DNA; UNC; 805 BP. XX AC R25_0_0000117 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000117 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003b10.f1; XX FH Key Location/Qualifiers FH FT source 1..805 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000117_A XX SQ Sequence 805 BP; 291 A; 181 C; 140 G; 193 T; 0 other; CGGGAAAACG GCATGAATTG TATACGACTC ACTATAGGGC GAATTGGGCC CTCTAGATGC ATGCCGAGCG GCCGCCAGTG TGATGGATAT CTGCAGAATT CCAGCACACT GGCGGCGTTA CTAGTGGATC TAGCTCGACT GGTGCTTCTT GTCTTGTTAT AGATCTACAA TAGTGTCTGG CTTGCAGTGG TTAAAATCTA ATTCATGCAG GGATTGAGTG AAGTTATAGA TCATACTCCA AGCTGCCGCA GATGCCTCCG ACGCCTAGAC TCTAGTTTAG GTCAGCAGAG TTGAAGATAG TGCGTTGAGA CTCTCATATT GTTGATGAAG CGGCGTGCAA TAAGCGTATA GACTCCTGAT GCTCGGATAC GCAAGCTTGA TGGCATAGCT TGAGTATTCT ATAGTGTCAC CCTAAATAGC TTGGCGTAAT CACTGGTCCT AGCTGTTTGC TTGTGTGTAA GTATTCTATA AGTGTCAACC TAAATTCGCT TTGGGTAAAT CATGGTCCTA GCTGTTTCCT GTTAAAAAAA ACACAATACA CACCCACAAA ACACACACAA CAACAAACCC AACAACCAAC AACACACACA CACACCACCA ACACACACAA CACAAAAAAC AACACGATCA ATCAGCACAA AATCACATAT ATGATTGAAC TAAAAATATA CTCTACACAC AAATCAAACA AAAAAAAAAA AACACTACCA TAATATAAAA AATTACATAA ACATAAAAAA AACAACACAC AATGATGTCC TTAACAATAA TTAAAATAAT AACCCCAAAA ACAAAACTAT TACTA // ID R25_0_0000118 standard; DNA; UNC; 736 BP. XX AC R25_0_0000118 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000118 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003b11.f1; XX FH Key Location/Qualifiers FH FT source 1..736 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000118_A FT misc_binding 131..166 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000118_1" FT /note="Base quality score is 5.7300e-02" FT misc_binding 166..199 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000118_2" FT /note="Base quality score is 5.5547e-02" FT misc_binding 199..232 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000118_3" FT /note="Base quality score is 1.0852e-03" FT misc_binding 232..265 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000118_4" FT /note="Base quality score is 2.7550e-04" FT misc_binding 265..298 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000118_5" FT /note="Base quality score is 2.8549e-02" FT misc_binding 298..331 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000118_6" FT /note="Base quality score is 7.2004e-02" FT misc_binding 331..364 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000118_7" FT /note="Base quality score is 1.5455e-02" XX SQ Sequence 736 BP; 236 A; 214 C; 157 G; 129 T; 0 other; AGCACACAAA CAGGCAGGAA TGTATACGAC TCACTATAGG GCGAATTGGG CCCTCTAGAT GCATGCCGAG CGGCCGCCAG TGTGATGGAT ATCTGCAGAA TTCCAGCACA CTGGCGGCCG TTACTAGTGG ATCTAAACCG CTACTCCAGT ATCTCACTAA TATAGATCTA CCAATCAACC TCGACGGATC AGGCATAGAT CTACTTCGGT TGCAGGGCCA AGGTGGTTTA GATCTAAAAA CGTCTGGTAA ACTCATGATG CTAGATCTAA GCCTAAAACG CCTGTCCCAT TCGTTAGATC TAGTGTCTTG TTTGATGAGG GGCGGGATAG ATCTAGGTTA TCTCGTCGCG TGCCTGATAG TAGATCCGAG CTCGGTACCA AGCTTGATGC ATAGCTTGAG TATTCTATAG TGTCACCTAA ATAGCTTGGC GTAATCATGG TCATAGCTGT TTCCTGTGTG AAAGGGCCAC CCCAACACAC ACAACAACAC CCCACACACC ACGTCCAAAC ACCGCCGACA CCCCCCACAG CACCACACAC AGACACCCCC ACCCACCACG ACCACACACG CCCGCACACA CCCACCCACG CCAACCACCC CCGACGGAGC ACGAGAGACA GAGATGGGAA AATAGAGAAA GGACACAACG ACGAGTTAAA CAAGAAAAAA AAGAACAAGA GAAAAGAGAA AAAGAACAGC ACACCAAGGC CCAAATCCGG CACAACACCA CAACCA // ID R25_0_0000119 standard; DNA; UNC; 800 BP. XX AC R25_0_0000119 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000119 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003c01.f1; XX FH Key Location/Qualifiers FH FT source 1..800 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000119_A FT misc_binding 86..119 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000119_1" FT /note="Base quality score is 3.2369e-04" FT misc_binding 119..152 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000119_2" FT /note="Base quality score is 1.1550e-03" FT misc_binding 152..185 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000119_3" FT /note="Base quality score is 5.3033e-05" FT misc_binding 185..218 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000119_4" FT /note="Base quality score is 2.5703e-05" FT misc_binding 218..251 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000119_5" FT /note="Base quality score is 3.7937e-04" FT misc_binding 251..285 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000119_6" FT /note="Base quality score is 1.0717e-04" FT misc_binding 285..318 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000119_7" FT /note="Base quality score is 7.3554e-05" FT misc_binding 318..351 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000119_8" FT /note="Base quality score is 2.2726e-04" XX SQ Sequence 800 BP; 305 A; 187 C; 149 G; 159 T; 0 other; GGGCAAGAGG CAGAATGTAA CGACTCACTA TAGGGCGAAT GGGCCCTCTA GATGCATGCT CGAGCGGCCG CAGTGTGATG GATAGATCTA GGAGTCGGCC AACTACAAAC CACATTAGAT CTAAGATTAC TAGCGCCCCC ACCGCTTGTA GATCTAGGGC ATGCGTTTTA CATTCAGTAG GTAGATCTAC TTCCGTGCAT CAAGGGGCTA TAGTTAGATC TAACGTTTTT CACCCAGCCT GACCCCGTAG ATCTACGTAT TTCACCATCC CCCTCTTACC TTAGATCTAC TGCTACCATC GCGACAATAT TTACTAGATC TATGGGGGTT TAAATAAAGG CCTATATTAG ATCCGAGCTC GGTACCAAGC TTGATGCATA GCTTGAGTAT TCTATAGTGT CACCTAAATA GCTTGGCGTA ATCATGGTCA TAGCTGTTTC CCCGGTGTAA CGGTATCGCC TAATATGCCA CACCAACTTC GCACCAGCAA CATAAGTGTA AAGCTGAATG CCATAATGAG TGACACTCAA ATAATTGGTT GCGCTCACAG CCAGTGTTCC AGTCGGAAAC CTGTCCGACT GGCAAACCCT GGAGGTGAAC CAAAACCAAC ACAAAAGAAA AAAAAAAAAA AAGACATACA AAAAGGCAAA AAAAAGAAAG AAACAACACC GAGAGCAAAA CACATAACAA CAAACAAACA AAAAAATACA AAAAACAAAA AACAGAGAAC ACAAAACAAC AAGAAAAGAG TACATAACAA ACAAGCAAAA CAACAAACAA ACAAAAAAAA ACAAAACACA // ID R25_0_0000120 standard; DNA; UNC; 800 BP. XX AC R25_0_0000120 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000120 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003c04.f1; XX FH Key Location/Qualifiers FH FT source 1..800 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000120_A XX SQ Sequence 800 BP; 274 A; 168 C; 196 G; 162 T; 0 other; AACGGCTGTT CGGCATTGAA TGTATAGTTT CAAATAGGGC GAATAGGGCC TCTAGATGCA TGCTCGAGCG GCGCCAGTGT GATGGATATC TGCAGAATTC CAGCACACTG GCGGCCGTAT ACTAAGTGGA TCTCATTACG AAGTTGATAC ATGTTACTTA AGATATGATA CTACGGTAGG AGGGGCAATT GTTGGTGCAT TGATATAAGA TCTACTGGCG AACTATTCCT GTGCCGTTAT CTTCTCTAGA ATCTATAGAG AGACAACCCC ACAGGGTACG CGTGTTATAG ACTCTACTAG GAGACCGAGC TGTATATGAA TAGTCTATAG ACTCTCACTA TTATTTGGTG AGATGACTGT CAGCATCACT AGATCCGCAG CTCGGTACCA AGCTTGATGC ATAGCTTGAG TATTCTATAG TGTCACCTAA ATAGCTTGGC GTAATCATGG TCATAGCTGT TTCCTGTGGT GAAAGCCGAC AGACAACACC CCGAGCGGAC AAACACAAGG AAAGAACTTA GACACTACAA GAACAAGAGC ACAAAAACAA GGAGCATAAC CAAAGGAGAC AAAAACAGGC GGCCAGAACA CGGCAGAAAG AAACGCCGAC CCAGCCGCAC GAAAGAAAGG AGAAATATAT GGCAAGACAC GCAGAGACAC GAGGACCACC GATGTCGCAC TGAAAGACCA GTTGACACTG GACATACCAC AAAACGAAGA GAAAGAACAG GATGAGTGAT AAGATTAAAG AAAACAAGAG ATATTCATCA GAGGACGTAG CAGAACAACA GAGCATGCGC // ID R25_0_0000121 standard; DNA; UNC; 404 BP. XX AC R25_0_0000121 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000121 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003c05.f1; XX FH Key Location/Qualifiers FH FT source 1..404 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000121_A FT misc_binding 138..171 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000121_1" FT /note="Base quality score is 6.9798e-04" FT misc_binding 171..204 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000121_2" FT /note="Base quality score is 7.1215e-04" FT misc_binding 204..237 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000121_3" FT /note="Base quality score is 1.1418e-04" FT misc_binding 237..270 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000121_4" FT /note="Base quality score is 5.3692e-04" FT misc_binding 270..303 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000121_5" FT /note="Base quality score is 4.2652e-03" XX SQ Sequence 404 BP; 98 A; 85 C; 114 G; 107 T; 0 other; TAAAACACGA TATACAGGCA GTGAATGTAC TAACGACTCA CTATAGGGCG AATTGGGCCC TCTAGATGCA TGCTCGAGCG GCCGCAGTGT GATGGATATC TGCAGAATTC CAGCACACTG GCGGCCGTTA CTAGTGGATC TACGGGCTGT CGGTAGGTGT TGGTTAATAG ATCTAGGTGT CCTGGTGAGG CGTCCGGATT TAGATCTACG CCGATTTACG CGCGCGCGTC ACTTAGATCT ATACCGAAGG CGAGGAGGTC TCCGGCTAGA TCTAGGATAA TGAGCTTGAT GGACGGATTT AGATCCGAGC TCGGTACCAA GCTTGATGCA TAGCTTGAGT ATTCTATAGT GTCACCTAAA TAGCTTGGCG TAATCATGGT CATAGCTGTT TCCTGTGTGA AAAC // ID R25_0_0000122 standard; DNA; UNC; 795 BP. XX AC R25_0_0000122 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000122 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003d01.f1; XX FH Key Location/Qualifiers FH FT source 1..795 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000122_A FT misc_binding 129..162 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000122_1" FT /note="Base quality score is 3.4490e-04" FT misc_binding 162..195 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000122_2" FT /note="Base quality score is 1.8581e-04" FT misc_binding 195..228 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000122_3" FT /note="Base quality score is 7.5539e-05" FT misc_binding 228..261 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000122_4" FT /note="Base quality score is 4.2092e-05" FT misc_binding 261..294 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000122_5" FT /note="Base quality score is 2.3714e-05" FT misc_binding 294..327 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000122_6" FT /note="Base quality score is 2.8311e-05" FT misc_binding 327..359 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000122_7" FT /note="Base quality score is 1.4769e-05" FT misc_binding 359..392 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000122_8" FT /note="Base quality score is 3.6425e-05" FT misc_binding 392..425 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000122_9" FT /note="Base quality score is 5.6468e-05" XX SQ Sequence 795 BP; 290 A; 172 C; 170 G; 162 T; 1 other; GGGTGAAAGG CAGTGAATTG TAATACGACT CACTATAGGG CGAATTGGGC CCTCTAGATG CATGCCGAGC GGCGCCAGTG TGATGGATAT CTGCAGAATT CCAGCACACT GGCGGCCGTT ACTAGTGGAT CTAGGGCATA GAATGGGACT TGGCAGGTTA GATCTACCTA TTCTGGAACG AGTACGGCCA CTAGATCTAC GCCCAAATTC AATAATAAAC GACTTAGATC TATTTGTTGG GAAGGCACAT TGGAGGCTAG ATCTAGATTG TCCAGACTTC CGCCCTGTAA TAGATCTAAT AGGCAGACCC AGTGGCAGCA CGCTAGATCT ACCTCAACCA ACTGTATCCG CCTTTTAGAT CTAACCGAAT TAAATGCACG GTGGATACTA GATCTAAAGC TAGAGGTCAA TGCAATAAAA CTAGATCCGA GCTCGGTACC AAGCTTGATG CATAGCTTGA GTATTCTATA GTGTCACCTA AATAGCTTGG CGTAATCCTG GTCCTTGCTG TTTTCCTGGT TAAAAGGNTG GTGCCACGAT CCCCCCCAAA ACTTTGCGGA ACCATATAGA AAACCCCGGA CCCCCATAAC ACCCGAATAA AAAGATGATG AACAAGAAAA ATAATAAACG AAGAGGCAAA AGAAGCGACA AAGAAGAATA AACAGAACAA CAAAAAGACA AAAACAAAAT ATAAGCCACA CGAAATGAGA AAACCGTACT CTTACCACAA AAAAAAAATA AAAAAGCAAT GACACAAGTA GAAAAAACAA GCAGAAGAAA ATAACCGCAC AGAAG // ID R25_0_0000123 standard; DNA; UNC; 790 BP. XX AC R25_0_0000123 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000123 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003d04.f1; XX FH Key Location/Qualifiers FH FT source 1..790 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000123_A XX SQ Sequence 790 BP; 393 A; 153 C; 146 G; 98 T; 0 other; GGAAAACAGG CAGATGTATG ACTACTATAG GGGAATTGGG CCCTCTAGAT GCATGTCGAG CGGCGCCAGT GTGATGGATA TCTGCAGAAT TCCAGCACAC TGGCGGCGTT ACTAGTGGAT CCGAGCTCGG TACCAAGCTT GATGCATAGC TTGAGTATTC TATAGTGTCA CCTAAATAGC TTGGCGTAAT CATGGTCATA GCTGTTTCCT GTGTGAAATG GCAACTCGCA TGACAATAGA CTATACAACT ATCAAAGTCA AACGAAACAA AACTTTGAAC ACCTTGACAC CCTCAACAAC ACACACACAC ACTCAACAGA CAAATAAAAA TTACAAAAAA TCAAAACAAA ACAGTACCGA CCGAACAAAC CAACAAAACA CAAACCAAAA AAAAACACAA GCATAATAAA CGACGGTGAA AAAAAACAAC AGAGAAATAA AACAAAAGAA AGGAGAAGAG AAAACAGCGA CACAACTGCA AAAGTAGCAG CCACGACAAA TCAAGAAGAA CAACACGAAC CAGTACAACA CAACAAAAAC GAAGAAATAT ACAAGAAAGC AGCAAAAGAT AAGAAACAGA ATACACAACA AGAGAGAGAC AAACAAGACA AAGAGAAAAA GAAAGACGTC AGACACAAGA CTAAAAACAA AGATGCAGAG AAAAAAAAAA GAGAGAGAGA AGCAACGCAC AAGACAGAAA GAAAAGAGAA ATAAATAGCA AAAACAAAAA CAAAGAAAAA TGAAAGCGGA CAAAAAAAAG AAACACAAGA CAGAAGAAAA CAAAAGTGAA // ID R25_0_0000124 standard; DNA; UNC; 606 BP. XX AC R25_0_0000124 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000124 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003d07.f1; XX FH Key Location/Qualifiers FH FT source 1..606 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000124_A FT misc_binding 116..149 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000124_1" FT /note="Base quality score is 5.7370e-05" FT misc_binding 149..182 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000124_2" FT /note="Base quality score is 3.4820e-05" FT misc_binding 182..215 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000124_3" FT /note="Base quality score is 7.9731e-05" FT misc_binding 215..248 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000124_4" FT /note="Base quality score is 5.5150e-05" FT misc_binding 248..281 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000124_5" FT /note="Base quality score is 9.4705e-05" FT misc_binding 281..314 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000124_6" FT /note="Base quality score is 3.3559e-04" FT misc_binding 314..347 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000124_7" FT /note="Base quality score is 1.7225e-04" FT misc_binding 347..380 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000124_8" FT /note="Base quality score is 2.2261e-03" FT misc_binding 380..413 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000124_9" FT /note="Base quality score is 1.2912e-04" FT misc_binding 413..446 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000124_10" FT /note="Base quality score is 6.6076e-05" XX SQ Sequence 606 BP; 184 A; 132 C; 138 G; 151 T; 1 other; GGGCAGTGAA TGATACGACT CACTATAGGG CGAATGGGCC TCTAGATGCA TGCTCGAGCG GCGCAGTGTG ATGGATATCT GCAGAATTCC AGCACACTGG CGGCGTTACT AGTGGATCTA TAGCTAGGTC ATGGTGGTTC TCAGGTAGAT CTAAGTGATT TCCGTACGCA CTAATAAGTA GATCTACATG AACACTCCAC ACCCACTATC CTAGATCTAA TCGCTTAAGT TATGTCATAC GACGTAGATC TACGACGCAA GAGTACCTGA ATATGTTTAG ATCTACTAGG TGCAATACAA AACTCAGCCC TAGATCTAGC CCCTAACCAA CTGAACCGGT TATTAGATCT AAGGTTTCTA GGGTGACGGG TTGGTATAGA TCTAGTGCGC TGGCCTAGGA CTATCCCGCT AGATCTAGGG TAGACGGCTG ACTGATTCAG ATTAGATCCG AGCTCGGTAC CAAGCTTGAT GCATAGCTTG AGTATTCTAT AGTGTCACCT AAATAGCTTG GCGTAATCAT GGTCCTAGCT GTTTCTGTGT TAAAAGGNTA AACACAATAC CCAAAACAAC AAGAAAAAAA AACAAAACCA CAAAAGAAAC GAGACC // ID R25_0_0000125 standard; DNA; UNC; 432 BP. XX AC R25_0_0000125 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000125 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003d08.f1; XX FH Key Location/Qualifiers FH FT source 1..432 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000125_A FT misc_binding 121..154 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000125_1" FT /note="Base quality score is 1.4848e-04" FT misc_binding 154..187 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000125_2" FT /note="Base quality score is 1.9808e-03" FT misc_binding 187..220 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000125_3" FT /note="Base quality score is 7.6206e-05" FT misc_binding 220..253 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000125_4" FT /note="Base quality score is 3.9573e-03" FT misc_binding 253..286 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000125_5" FT /note="Base quality score is 1.0716e-04" XX SQ Sequence 432 BP; 135 A; 86 C; 102 G; 109 T; 0 other; GACAGGCAGG ATGTATACGA CTCACTATAG GGCGAATTGG GCCCTCTAGA TGCATGCTCG AGCGGCGCCA GTGTGATGGA TATCTGCAGA ATTCCAGCAC ACTGGCGGCG TTACTAGTGG ATCTACAACT ATTAACAAAA ATCCACGGAC TAGATCTAGT TGTCATGGGC GTCACAGGTT CTTTAGATCT ATCGGTGACT GCGCCGGTTT CGAATTTAGA TCTATTGGGG GGCAGCGTAA CGTAAGGTTT AGATCTAAAA CCATCATACT AAAAAACTAT TGTAGATCCG AGCTCGGTAC CAAGCTTGAT GCATAGCTTG AGTATTCTAT AGTGTCACCT AAATAGCTTG GCGTAATCAT GGTCATAGCT GTTTCCTGTG TGAAACACTA AACGATAAGA AATACAAGAA AAGAAAACGA ACGAAAAAAC AA // ID R25_0_0000126 standard; DNA; UNC; 242 BP. XX AC R25_0_0000126 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000126 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003d11.f1; XX FH Key Location/Qualifiers FH FT source 1..242 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000126_A XX SQ Sequence 242 BP; 63 A; 53 C; 62 G; 64 T; 0 other; GAAATCGCAG TGATGTATAC GATTCACTAT AGGGCGAATT GGGCCCTCTA GATGCATTCG AGCGGCGCCA GTGTGATGGA TATCTGCAGA ATTCCAGCAC ACTGGCGGCC GTTACTAGTG GATCTAGAAC TCAAATCCTC ATGCGGACAA GTAGATCCGA GCTCGGTACC AAGCTTGATG CATAGCTTGA GTATTCTATA GTGTCACCTA AATAGCTTGG CGTAATCATG GTCATAGCTG TT // ID R25_0_0000127 standard; DNA; UNC; 1150 BP. XX AC R25_0_0000127 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000127 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003d12.f1; XX FH Key Location/Qualifiers FH FT source 1..1150 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000127_A XX SQ Sequence 1150 BP; 547 A; 319 C; 107 G; 177 T; 0 other; ACCGGGAACC GCAGTGATGT ACTACATTCA CTATAGGGCG AATTGGGCCC TCTAGATGCA TGTCGAGCGG CGCCAGTGTG ATGGATATCT GCAGAATTCC AGCACACTGG CGGCGTTACT AGTGGATCCG AGCTCGGTAC CAAGCTTGAT GCATAGCTTG AGTATTCTAT AGTGTCACCT AAATAGCTTG GCGTAATCAT GGTCATAGCT GTTTCCTGTG TGAAACGGCT CATCATACCA CTCTCAACAC AACTAACATA CACACAAACA AAACATCAAT CAAAACTAGA ACATCACAAC AACACACAAA ACAACAACCC ACAAACAAAT CATAAATACC ACAAAAATCA GCAAAACAAC TAACCAATCA AAAAATACAA ACAAAAAACA TAATAAATAA TAAACATAAC AACACACATT CAAATACACA AACATAAAAC TAATACAACA ACAACAAATC AACAACATAC ACAAGCTACA TATACTAACC ACTGCTATCA AGTAAGCAAC ACACACTGAC ACAACAACAT ACACAACCAT CAAACATCAC AAGTAATACA TCAACAACAC ACATATAACA CACACAAACC ACACAAAAAC ATAAACACCC AGCAACTCAC AGAATCACAG AGACACAAAA TAACAGACAC CTAACACAAC ACAAGATCTA CAAACCCGAT AGTAACGTAC AACACAGACA CCACAATACA CAACACAACT TAACCCACCA CAATAAATAC ACACACGAAC ACAACGAAAC ACTACTTAAT AGAGCCCTAC AAAAACTAGA CGACACCAAC ACACTACAAA TACCAAGCAC TGAACGACAC GAACACCAAT ACACATACTC AGAAACCACA ACAAACCAAG AATAAAATAC AATATAACAG ATTCACACAA CTCAACGAAC ATACAAATAA AGAGCAAAAC ATAACAACAT ACATTACCGA ACACATCAAA CATAAACAAG AATACAATCA TACAAACATA TCAATACTAC ACATCACAAC CATACAGAGA CATACTAAAT ACACTCACAA ACCAGAACAA TAATCAGACA ATCACCTATC ACATACCACC GCAAGAACAC TAACACAAAA TACAATACAA TAGACCTATA CAACCATAAC AAACACACAA CTAAAGACCA // ID R25_0_0000128 standard; DNA; UNC; 818 BP. XX AC R25_0_0000128 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000128 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003e05.f1; XX FH Key Location/Qualifiers FH FT source 1..818 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000128_A FT misc_binding 130..163 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000128_1" FT /note="Base quality score is 1.5659e-02" FT misc_binding 163..196 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000128_2" FT /note="Base quality score is 4.0470e-02" FT misc_binding 196..229 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000128_3" FT /note="Base quality score is 6.4396e-04" FT misc_binding 229..262 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000128_4" FT /note="Base quality score is 4.5109e-03" FT misc_binding 262..295 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000128_5" FT /note="Base quality score is 3.4325e-03" FT misc_binding 295..328 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000128_6" FT /note="Base quality score is 1.2345e-02" FT misc_binding 328..361 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000128_7" FT /note="Base quality score is 2.1503e-02" FT misc_binding 361..394 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000128_8" FT /note="Base quality score is 6.9930e-02" FT misc_binding 394..428 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000128_9" FT /note="Base quality score is 2.8628e-02" FT misc_binding 428..461 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000128_10" FT /note="Base quality score is 3.5453e-02" FT misc_binding 461..494 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000128_11" FT /note="Base quality score is 1.2939e-01" XX SQ Sequence 818 BP; 304 A; 164 C; 167 G; 183 T; 0 other; GGTGAAGACG GCAGTGAATT GTATACGACT CACTATAGGG CGAATTGGGC CCTCTAGATG CATGCTCGAG CTGGCGCAGT GTGATGGATA TCTGCAGAAT TCCAGCACAC TGGCGGCCGT TACTAGTGGA TCTATCGATG CTCCTTATCT TGTTATTGTT AGATCTAAAG AGTACCCAAT TCCCTAGGCT GATAGATCTA AGATTGTGCT ACGTCGTGAG GTAAGTAGAT CTACCGGCTG GACGCAGCCG ACTGTTGTTA GATCTAGCGT AGGTGAGTTG TGGCTAATTT GTAGATCTAG TATTTAAGAT CCCCATCCTC GTGTTAGATC TAAGGGTGGG TCGAGTAAGC TAAAGGTTAG ATCTATTACG AGGAATGTCG GGGTGTCTAC TAGATCTAGT AAGCGGGACT GGAGAACACA TTTATAGATC TACCCGTATG TGCAACCTGA ACCGCGATAG ATCTACCTAC CTTAGTAAGC CGTGAGCCCT TAGATCTAGG ATGAGAATGA GTCGTGTACA AATTAATAAG ATCCGAAGCT CGGTACCAAG GCTTGATGGA TAGCTTGAGT ATTCAATAGT GAAACCTAAA TTGTTGCATA ACACTAGTCA ACATATTCTT TAGAAAAAAA AAAAAGCAAA GAAAAAACAC AAAACTACAG AAAACAAACA CCACACACCA AAAGAGACCA AAACAAAGTA AAACACATAC CAAAACACAT AACACCCAAA AAAAACAAAC ATAAAACAAA AAAAAAAACA CAACAAAACA ACAAAACAAC CAAATTAACA CAACAACAGA CAACGACAAC AAAAAAAA // ID R25_0_0000129 standard; DNA; UNC; 852 BP. XX AC R25_0_0000129 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000129 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003e06.f1; XX FH Key Location/Qualifiers FH FT source 1..852 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000129_A FT misc_binding 124..158 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000129_1" FT /note="Base quality score is 4.5555e-02" FT misc_binding 158..191 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000129_2" FT /note="Base quality score is 5.8911e-04" FT misc_binding 191..224 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000129_3" FT /note="Base quality score is 7.6603e-03" FT misc_binding 224..257 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000129_4" FT /note="Base quality score is 4.1919e-03" FT misc_binding 257..290 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000129_5" FT /note="Base quality score is 5.2786e-05" FT misc_binding 290..323 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000129_6" FT /note="Base quality score is 6.6163e-04" FT misc_binding 323..356 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000129_7" FT /note="Base quality score is 1.1329e-02" FT misc_binding 356..389 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000129_8" FT /note="Base quality score is 4.8335e-02" FT misc_binding 389..422 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000129_9" FT /note="Base quality score is 1.2537e-02" XX SQ Sequence 852 BP; 330 A; 191 C; 163 G; 167 T; 1 other; CAGGGCAGGA ATGTAATACG ACTCACTATA GGGCGGAATT GGGCCCTCTA GATGCATGCT CGAGCGGCCG CAGTGTGATG GATATCTGCA GAATTCCAGC ACACTGGCGG CCGTTACTAG TGGATCTAAA TTAGTACTTA GGTCGGTCGA GAAATAGATC TAGAAGAGGG TAGGCCGCCT GTTGAAGTAG ATCTACTGTG TTAAACGCCA TCCGCTTGGC TAGATCTACC AAAACCTCTT TATCGCCCGT GTATAGATCT ACCGCCCGGG GTTTGGTTCG AATTGATAGA TCTAGTTAAC CGAGCCCGAC GTCGTAAGAT AGATCTAAAT ACAGGGACCC ACACCGAGTT CCTAGATCTA ACACCCATAA ATTCAACTAT GCAAGTAGAT CTATATGCCC TGCGAAAACG CAATTGAGTA GATCCGAGCT CGGTACCAAG CTTGATGCAT AGCTTGAGTA TTCTATAGTG TCACCTAAAT TGCTTGGCGT TATCATGGTC CTTGTTGTTC CTGTTTGAAA CGGNTACAAC CACCAAAAAC CAAACAAATA AACAACACAA ACACAAAAAC AGAAAAAAAA AACACAACAC ACGAATCAAA CACAGACATA AGAAGAAACA ACGAGCACAA GAAAGGACCA CACACCAGCC AGATAAACAG TGATACAAAA CATCAACATA CTATAACACA ACGACAAACA GAAAAATAAA AAATAAATAA ATAGAAAATA ATCAGCCAAG AAATACTAAA GAATAAAACA TAGCAAAAAC AACAGAACAC AAGACGCAAA AGACATGAAA GCAGAGAACA CACTAACGCT GCATATCACA GTAGATACAC GACATCAAGA CA // ID R25_0_0000130 standard; DNA; UNC; 410 BP. XX AC R25_0_0000130 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000130 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003e07.f1; XX FH Key Location/Qualifiers FH FT source 1..410 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000130_A FT misc_binding 130..163 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000130_1" FT /note="Base quality score is 9.5472e-04" FT misc_binding 163..196 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000130_2" FT /note="Base quality score is 8.8607e-04" FT misc_binding 196..229 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000130_3" FT /note="Base quality score is 3.3144e-04" FT misc_binding 229..262 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000130_4" FT /note="Base quality score is 3.6135e-05" FT misc_binding 262..295 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000130_5" FT /note="Base quality score is 4.1948e-05" XX SQ Sequence 410 BP; 117 A; 87 C; 98 G; 107 T; 1 other; AGAAAGAAAA CGGCAGGAAT GTATACGACT CACTATAGGG CGAAATGGGC CCTCTAGATG CATGCTCGAG CGNGCGCCAG TGTGATGGAT ATCTGCAGAA TTCCAGCACA CTGGCGGCGT TACTAGTGGA TCTAATCTCT GCTAATACAA TCGGTGTGGT AGATCTACGT GGCCACTTCT ATATCCTACC ATTAGATCTA GGGCCTGCTT GCCCGACGCA GAAAGTAGAT CTAATAAGGC AAAGTTGGCG AACATCTATA GATCTAGTGA TACTTGAGCT GCTACTTAAA TTAGATCCGA GCTCGGTACC AAGCTTGATG CATAGCTTGA GTATTCTATA GTGTCACCTA AATAGCTTGG CGTAATCATG GTCATAGCTG TTTCCTGTGT GAAACGGCTC CAAAATAAAA // ID R25_0_0000131 standard; DNA; UNC; 876 BP. XX AC R25_0_0000131 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000131 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003e11.f1; XX FH Key Location/Qualifiers FH FT source 1..876 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000131_A XX SQ Sequence 876 BP; 366 A; 246 C; 96 G; 165 T; 3 other; AGGGAGACTC GCAGGAATTG TATACGACTC ACTATAGGGC GAATTGGGCC CTCTAGATAC ATGCCGAGCG GCCGCCAGTG TGATGGATAT CTGCAGAATT CCAGCACACT GGCGGCGTTA CTAGTGGATC CGAGCTCGGT ACCAAGCTTG ATGCAGCTTG AGTATTCTAT AGTGTCACCT AAATCGCTTG GCGTAATCAT GGTCATAGCT GTTTCCTGTG TAAAAAGCCC GCGAGGGTCA CCGAGTCACG ACCGCGATGT ATACCACCAA GATCACCATC AGAACATCTC TTCCAATCTA ACAATCGTAC ACCCTACAAA ATATAAATAA TAAAACAACT AAATCAATAC TAACTTCATA AACAACACTA CTTACAACTA TCAAACATAC AAAAAAAACA CTAAAAAAAA AAACAACAAC ACACTTCTTC CTTCAAACTA TACTTCAACC ACCACTAGTC ACCAAACACA ACATACCGAC ATAACCACTC ACTAAAAACA TGATCACTTT AACATACACG AACCCAACAG ACAACAAAAT CATACACATC CAACACACAC CCACCATTAC GCAACCATCA TATATACCAC TAAACACAAC ATATACAAAA AACCTAAATA ATAATACACC TCTACTACCA ACCTAACTAA CCCACAACAG TACATAAACA AATTAGCAAC ATAAACGACG ACAAAACATA TATGCAACTC AAAACCAAGA CACACACGTA GCAAATAAGT ACTAATCAAC TAAGAAACAT ACACAACTAC ATTGATACAA CAAGCAACAC CAAAACAAAA CCTTATATAC CCTTTACCTC CAACACTNAN NAACAAACAA AGCAACAACA ACTACGCACC ACCAAACAAC AACAAC // ID R25_0_0000132 standard; DNA; UNC; 715 BP. XX AC R25_0_0000132 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000132 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003e12.f1; XX FH Key Location/Qualifiers FH FT source 1..715 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000132_A XX SQ Sequence 715 BP; 230 A; 284 C; 129 G; 72 T; 0 other; CCCCCGCACG CGGACAGACA CGGATTCCAC ATGGGCACCA TGGGCCTCCA CGACATCCAG CCCGCGGCCG CACGAGATAG CTGACACATC ATGCCGACAC TTCACGACAC CTGGCGGCCG TACCACGAGA CTCACCATGA TGACGCAGTC GCGACACGAC TCCAACGACT CACGTACTCC ACGGACACAC CCAACTCCGG CCGACGACTC TCGGTCGTAA CGCAGGCGGG ACAACGTAAC GCTCTACCGA CATCACTACC CACGCCCTAA ACTAAAGCAT CTAGCTACAT CACCTACACC ACATCCACAC TCATATAGCA TCCGCAGCTC GGTACCAAGC TAGCATGCCT AGCTAGCAGT ATAACGCTAA GTAGTCACCT CACATAGCTA GGCGTAATCA TAGTCCATAG CTATATCCTG TGTAGCAAAG GGTCGGCGGG AATACCCCCC GACCACGCCC GCGAGAGACA CCCCCCAGAC CCGAGCGAAC AACAGACCGC CCAAACAAGC AGCACACACC CCCACCAACC CACAAACACA CCGCAAAAAC AACCAGAACC CAACACCCCA CACACACCAA CCGACGCGCC ACCGCGACCA CCACAAAGAC AAAACCGACA CGCCCAGACA CCTCCACACA CAGAACACAC AACAAAGACG CCAAGACACA ACCAACCGAC CACCCAACGC GAAGAGCACA ACCACAACAC GAACC // ID R25_0_0000133 standard; DNA; UNC; 612 BP. XX AC R25_0_0000133 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000133 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003f01.f1; XX FH Key Location/Qualifiers FH FT source 1..612 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000133_A FT misc_binding 118..151 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000133_1" FT /note="Base quality score is 1.6838e-02" FT misc_binding 151..184 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000133_2" FT /note="Base quality score is 1.8792e-04" FT misc_binding 184..217 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000133_3" FT /note="Base quality score is 1.1029e-04" FT misc_binding 217..250 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000133_4" FT /note="Base quality score is 4.1061e-04" FT misc_binding 250..283 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000133_5" FT /note="Base quality score is 1.5850e-03" FT misc_binding 283..316 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000133_6" FT /note="Base quality score is 1.7019e-02" FT misc_binding 316..349 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000133_7" FT /note="Base quality score is 2.6427e-02" FT misc_binding 349..382 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000133_8" FT /note="Base quality score is 1.6262e-02" XX SQ Sequence 612 BP; 194 A; 149 C; 133 G; 133 T; 3 other; CGAGCGTGAA TGTATACGAC TCACTATAGG GCGAATTGGG CCCTCTAGAT GCATGCCGAG CGGCGCAGTG TGATGGATAT CTGCAGAATT CCAGCACACT GGCGGCGTTA CTAGTGGATC TATGTCCTCG CGCTGGAAAA TTATTCTTAG ATCTACGCGG CTGGCGTAAC TGGACCCACA TAGATCTACC TACTATCACC AGGCGTGGGC TAATAGATCT ACCAGATCCG CACACTTATG TTAATGTAGA TCTAGACAGT TCAAGTCTAC AGGAGAAATT AGATCTACGG CAGCCCTTCA ATCCAATCGA ACTAGATCTA TGGGCAGGCT AGAGGGGATG TACCTTAGAT CTACTTGGTA CTATGCGCTG CGTAACTCTA GATCCGAGCT CGGTACCAAG CTTGATGCAT AGCTTGAGTA TTCTATAGTG TCACCTAAAT AGCTTGGCGT AATCATGGTC ATAGCTGTTT CCGGTGTGAA AGNNTTCACA AGAAACCCAC AAAAAATCGC CCAAGCCAAG AAAACACAGA GCAAAAAGAA ACAACAAAGA AGCAAGAACC CCCCCATACA AAAGAACAGA ACAACACATA CAGACCTCAC AAAACACAAC CN // ID R25_0_0000134 standard; DNA; UNC; 769 BP. XX AC R25_0_0000134 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000134 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003f09.f1; XX FH Key Location/Qualifiers FH FT source 1..769 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000134_A FT misc_binding 118..151 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000134_1" FT /note="Base quality score is 2.1327e-04" FT misc_binding 151..184 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000134_2" FT /note="Base quality score is 2.3414e-03" FT misc_binding 184..217 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000134_3" FT /note="Base quality score is 3.7041e-04" FT misc_binding 217..250 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000134_4" FT /note="Base quality score is 4.8976e-03" FT misc_binding 250..283 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000134_5" FT /note="Base quality score is 7.3735e-05" FT misc_binding 283..316 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000134_6" FT /note="Base quality score is 1.7106e-04" FT misc_binding 316..349 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000134_7" FT /note="Base quality score is 3.4194e-04" FT misc_binding 349..382 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000134_8" FT /note="Base quality score is 2.0521e-04" XX SQ Sequence 769 BP; 237 A; 174 C; 182 G; 175 T; 1 other; TGCGTCGGAT GTATACGATT CACTATAGGG CGAATTGGGC CCTCTAGATG CATGTCGAGC GGCGCCAGTG TGATGGATAT CTGCAGAATT CCAGCACACT GGCGGCGTTA CTAGTGGATC TATCGTGATG ACTACTATAT TTTAAAATAG ATCTAAGCAC TCGGGAGCCT GCCTCAGTAT TAGATCTAAC ACGACGTCGA GCCCAATCTG ACTTAGATCT ATCATCTCTC CCTCCACATT ACGTCGTAGA TCTAAATTCA AGAGGGGGCG GTCTCATTCT AGATCTAGGT CAAAATGCGC ATTTGATCAC GGTAGATCTA GTACGGAAGT AGGTTTGTCT GTTTGTAGAT CTATGCCAGT ATGATTGGTG GGAGCTTATA GATCCGAGCT CGGTACCAAG CTTGATGCAT AGCTTGAGTA TTCTATAGTG TCACCTAAAT AGCTTGGCGT AATCATGGTC ATTAGCTTGT TTCCTGTGTG AAAAGNCGGC GACTACCACG CACCAACAAC AGGCGGACAC CACACGAAAA ACAACACAAT ATCAGATACA CAGTACCCAG ACACACAAGC CCACACCAAG AGAAGGAGAA AATAGAACGT AACGAAGTGA GAGGAACGAC AGCGACGCTG GTAGAAATGA ACATGAGCAC TAACCGCTAC TGAGATACGG TAGACGCACA AGAAGAATTA TCACCTCAGA ATCCCGAGAC AGATAGCATT CGCAGGACAA GGATAAGATT CCTTACACAC AGCAATGAGA GGCAGCACG // ID R25_0_0000135 standard; DNA; UNC; 427 BP. XX AC R25_0_0000135 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000135 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003f12.f1; XX FH Key Location/Qualifiers FH FT source 1..427 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000135_A FT misc_binding 121..154 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000135_1" FT /note="Base quality score is 2.0107e-04" FT misc_binding 154..187 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000135_2" FT /note="Base quality score is 1.9205e-04" FT misc_binding 187..220 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000135_3" FT /note="Base quality score is 9.7080e-05" FT misc_binding 220..253 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000135_4" FT /note="Base quality score is 1.9725e-04" FT misc_binding 253..286 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000135_5" FT /note="Base quality score is 5.8056e-04" FT misc_binding 286..319 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000135_6" FT /note="Base quality score is 3.2430e-04" XX SQ Sequence 427 BP; 112 A; 83 C; 114 G; 115 T; 3 other; AAGCAGTGAA TTGTATCGAT TCACTATAGG GCGAATTGGG CCCTCTAGNA TGCATGCTCG AGCGGCCGCA GTGTGATGGA TATCTGCAGA ATTCCAGCAC ACTGGCGGCG TTACTAGTGG ATCTACCGAG TGGAAGTTGT AGGTCTGGGA TAGATCTACT AGGGTCCTGT GCAGAGTGGG TGATAGATCT ATCGCCAGCG GAGGTCAAAC TAATATTAGA TCTACTAATT AACTCCAGGC GCCGCCCTCT AGATCTAGTT CGTGTAATGA GGTGGCGGGC TTTAGATCTA AGTAAGGTAT TAAGACGTTT GAAGCTAGAT CCGAGCTCGG TACCAAGCTT GATGCATAGC TTGAGTATTC TATAGTGTCA CCTAAATAGC TTGGCGTAAT CATGGTCATA GCTGTTTCCT GTGAANNAAA AACACAA // ID R25_0_0000136 standard; DNA; UNC; 243 BP. XX AC R25_0_0000136 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000136 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003g01.f1; XX FH Key Location/Qualifiers FH FT source 1..243 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000136_A XX SQ Sequence 243 BP; 61 A; 55 C; 65 G; 62 T; 0 other; TGGTCACAAG GCATGAATTG TATAGACTCA CTATAGGGCG AATTGGGCCC TCTAGATGCA GCTCGAGCGG CCGCAGTGTG ATGGATATCT GCAGAATTCC AGCACACTGG CGGCCGTTAC TATGTGGATC CGAGCTCGGT ACCAAGCTTG ATGCATAGCT TGAGTATTCT ATAGTGTCAC CTAAATAGCT TGGCGTAATC ATGGTCATAG CTGTTTCCTG TGTGAAAAGG CACAGCCAAG CCA // ID R25_0_0000137 standard; DNA; UNC; 434 BP. XX AC R25_0_0000137 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000137 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003g02.f1; XX FH Key Location/Qualifiers FH FT source 1..434 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000137_A FT misc_binding 121..154 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000137_1" FT /note="Base quality score is 7.9659e-05" FT misc_binding 154..187 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000137_2" FT /note="Base quality score is 2.7055e-04" FT misc_binding 187..220 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000137_3" FT /note="Base quality score is 1.7531e-03" FT misc_binding 220..253 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000137_4" FT /note="Base quality score is 1.5506e-03" XX SQ Sequence 434 BP; 147 A; 92 C; 92 G; 103 T; 0 other; TCACGGCAGT GAATGTATAC GACTCACTAT AGGGCGAATT GGGCCTCTAG ATGCATGCTC GAGCGGCGCA GTGTGATGGA TATCTGCAGA ATTCCAGCAC ACTGGCGGCG TTACTAGTGG ATCTAATTAC TTCTTTCTCC TTTGCGGGTC TAGATCTACA TTGACCCTGA ACCCAAAAGT TTTTAGATCT AGCCAACTAG AGACGGGCTG CTCTCATAGA TCTACGTGTG GGCGGTCTTA GAGGGAGATT AGATCCGAGC TCGGTACCAA GCTTGATGCA TAGCTTGAGT ATTCTATAGT GTCACCTAAA TAGCTTGGCG TAATCATGGT CATAGCTGTT TCCTTGATGA GAAAAAAACA ACAATAAAAA AAAAACAACA ATAAACACAA GAAACACAAC ACGACAAAAA CAAAAAAAAC AAACAAAAAC ACAA // ID R25_0_0000138 standard; DNA; UNC; 576 BP. XX AC R25_0_0000138 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000138 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003g03.f1; XX FH Key Location/Qualifiers FH FT source 1..576 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000138_A FT misc_binding 130..163 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000138_1" FT /note="Base quality score is 7.9844e-04" FT misc_binding 163..196 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000138_2" FT /note="Base quality score is 1.7647e-04" FT misc_binding 196..229 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000138_3" FT /note="Base quality score is 4.8011e-05" FT misc_binding 229..262 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000138_4" FT /note="Base quality score is 1.1222e-04" FT misc_binding 262..295 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000138_5" FT /note="Base quality score is 4.1522e-04" FT misc_binding 295..328 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000138_6" FT /note="Base quality score is 7.3084e-04" FT misc_binding 328..361 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000138_7" FT /note="Base quality score is 2.2886e-03" XX SQ Sequence 576 BP; 171 A; 148 C; 126 G; 129 T; 2 other; CGGTGAATAC GCAGTGAATG TATACGACTC ACTATAGGGC GAATTGGGCC TCTAGNATGC ATGCTCGAGC GGCCGCCAGT GTGATGGATA TCTGCAGAAT TCCAGCACAC TGGCGGCCGT TACTAGTGGA TCTACTGTGT AATATGTTTA AGGAGCAAAT AGATCTAAAT ATCCGATTAC CCAGCTCTAA CGTAGATCTA AGGGCTACTC CAACTCAACA ATAGATAGAT CTATGATCGG AAGGGGTGCG AGTTAGGTTA GATCTACCTC CCGCCTAAAG ATGCCACCCT CTAGATCTAA GACTACGGCT GAACGCCCAA CCCGTAGATC TATGAGGGGT CTGGTTAAAT CTGTTATTAG ATCCGAGCTC GGTACCAAGC TTGATGCATA GCTTGAGTAT TCTATAGTGT CACCTAAATA GCTTGGCGTA ATCATGGTCA TAGCTGTTTC CTGTGTGAAA GGNTTGACCA TATCCCCCGC ACGAACAGGA GACAAACACA CGAAAAACCG CACACCAGCA AACGCACCAC ACCCAAACAC CCACAAAACC AACACGTCAT CCAGCCGACT CAACCA // ID R25_0_0000139 standard; DNA; UNC; 939 BP. XX AC R25_0_0000139 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000139 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003g04.f1; XX FH Key Location/Qualifiers FH FT source 1..939 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000139_A XX SQ Sequence 939 BP; 476 A; 224 C; 108 G; 131 T; 0 other; CTGTAGACGG CAGTGAATGT ATACGACTCA CTATAGGGCG AATTGGGCTC TAGATGCATG CTCGAGCGGC GCCAGTGTGA TGGATATCTG CAGAATTCCA GCACACTGGC GGCGTTACTA GTGGATCCGA GCTCGGTACC AAGCTTGATG CATAGCTTGA GTATTCTATA GTGTCACCTA AATAGCTTGG CGTAATCATG GTCATAGCTG TTTCCTGTGT GAAACGGCAA CTACAGAATC ACCAAACACA CAACGACGCA CACAAAACCG AGACAAACAA CAAGAAGAAC ATAGCAAGAA TAAGATCACG ACTCGAACAA CCACCCACCC TTGAGCGCAG AACACAGCGA CAACAACTGC ACAAGCCAAC ACCCAGCACG AGAAAATCCA TGACCGCCCC ACTGCACAAC AACCACCAGA ACCGACCACA CCAAAACACC CAACTAAAAC AACCAAAAAC ATAAGATAAA GATATAAGAA CACAATAAAA ACACAAACAA AAAAAACAAA AATATAACAA AAAAATACAC TCAAAACACA CCTTAACCGA ACACTACAAG CTATAAAACT ATCACATACA CATACAAACA ACAGACAATA ACAAAACAAA ATTAAAAAAA ATCAACAAAA CACAATCAAT CAAAAAAAAA CAATACAACA AATAACACAA ACACAAAACA AACACAAAAC AATGCATCTC ACAACAAACA TACAAGAAAC AAAGACACCA ACACAAAAAA CTAAAGAATA GCAACAAAAA AACAAAATAA AGCTAAACAA CAATACACTC AAACATAAAA TAACAACCAA AAAAATAACA CAACATATAA ACATCAGAAA AAAACAAAAA ATAAAAATAA AAAAAATACT AAACTAAAGT ACCAATCAAA TCATCAAACA CAATAGATAC AAAAATAAAA GAAAATAAAC AAAATAATA // ID R25_0_0000140 standard; DNA; UNC; 843 BP. XX AC R25_0_0000140 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000140 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003g05.f1; XX FH Key Location/Qualifiers FH FT source 1..843 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000140_A FT misc_binding 120..153 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000140_1" FT /note="Base quality score is 1.7891e-04" FT misc_binding 153..186 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000140_2" FT /note="Base quality score is 1.1200e-03" FT misc_binding 186..219 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000140_3" FT /note="Base quality score is 7.3721e-05" FT misc_binding 219..252 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000140_4" FT /note="Base quality score is 4.7347e-04" FT misc_binding 252..285 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000140_5" FT /note="Base quality score is 1.2462e-02" FT misc_binding 285..317 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000140_6" FT /note="Base quality score is 8.5585e-03" FT misc_binding 317..350 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000140_7" FT /note="Base quality score is 1.4382e-02" FT misc_binding 350..383 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000140_8" FT /note="Base quality score is 3.1214e-03" FT misc_binding 383..416 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000140_9" FT /note="Base quality score is 5.1904e-03" XX SQ Sequence 843 BP; 326 A; 193 C; 173 G; 149 T; 2 other; AGCAGCAGTG ATGTATACGA CTCACTATAG GGCGAATTGG GCCCTCTAGA TGCATGTCGA GCGGCGCCAG TGTGATGGAT ATCTGCAGAA TTCCAGCACA CTGGCGGCGT TACTAGTGGA TCTACGTTGC CAGTATTAGT CGTTATGACT AGATCTACGG AGTTCGCTCA AAATCTATCT ATTAGATCTA AAACCGGAGA GCTGCAGTCT AGAACTAGAT CTAAAGGACA AAAAAATTCA GCCGACCGTA GATCTAAACC TCCAGCCCAA CGTCGCGATC CTAGATCTAG CAACGCAACG GCTTCTAGAC GTGTAGATCT ATGAACTTTA GACAAACCAG GGTAGGTAGA TCTAGTTTTT GTGGTTAGCG GCTGGCGAGT AGATCTACAT GGAGAATATC GACACTCTTC CCTAGATCCG AGCTCGGTAC CAAGCTTGAT GCATAGCTTG AGTATTCTAT AGTGTCACCT AAATAGCTTG GCGTAATCAT GGTCCTAGGC GTTTCCTGTG TGAAAAGNNT TGACCAAGAA TACACAAACC AAAAACGCAC ACAAAAAAAA ACAAAAAAGA AAAAAACGAA AAAGAAAAAC ACACCAAGAC CAACAACCGA AGAAAGTGCG AGAAACAAGA AAAAAAAAAG AAGAAAGAAA GAAACAACAA AAGCGATACA AAAAGCAACA ATCAACTAAA GCACAGAGCA TAAAAGCAGC AGCAACAACC TATCACACAC AGACAAATCA TAACGCGACC CAGACAAGAA TACAGCGAAC AACCACAGAA AAGAAACACG CACACACCCA TCACACAAAG AGCACAGAGA GACAACACGC ATACCGCAGG CGA // ID R25_0_0000141 standard; DNA; UNC; 753 BP. XX AC R25_0_0000141 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000141 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003g06.f1; XX FH Key Location/Qualifiers FH FT source 1..753 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000141_A FT misc_binding 122..155 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000141_1" FT /note="Base quality score is 6.0940e-05" FT misc_binding 155..188 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000141_2" FT /note="Base quality score is 5.0734e-05" FT misc_binding 188..219 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000141_3" FT /note="Base quality score is 1.0501e-04" FT misc_binding 219..252 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000141_4" FT /note="Base quality score is 2.6546e-05" FT misc_binding 252..285 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000141_5" FT /note="Base quality score is 5.5576e-05" FT misc_binding 285..318 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000141_6" FT /note="Base quality score is 3.2890e-05" FT misc_binding 318..351 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000141_7" FT /note="Base quality score is 8.7087e-05" FT misc_binding 351..384 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000141_8" FT /note="Base quality score is 4.9445e-05" FT misc_binding 384..417 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000141_9" FT /note="Base quality score is 2.1510e-04" FT misc_binding 417..450 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000141_10" FT /note="Base quality score is 1.6615e-03" FT misc_binding 450..483 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000141_11" FT /note="Base quality score is 3.5140e-03" FT misc_binding 483..516 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000141_12" FT /note="Base quality score is 5.0754e-03" FT misc_binding 516..549 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000141_13" FT /note="Base quality score is 3.9390e-03" FT misc_binding 549..582 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000141_14" FT /note="Base quality score is 5.0937e-02" XX SQ Sequence 753 BP; 214 A; 166 C; 191 G; 182 T; 0 other; TGAGGCAGTG AATTGTATAC GACTCACTAT AGGGCGAATT GGGCCCTCTA GATGCATGCC GAGCGGCGCC AGTGTGATGG ATATCTGCAG AATTCCAGCA CACTGGCGGC GTTACTAGTG GATCTATATC GGGAATTTGT GTGACTTTTC TTAGATCTAG AGGATCGGCA CGAGGGTACT ATCATAGATC TAATAGCCCG CTGCCATCCA CTCTCGAGAT CTATGGTGGA TTTGCGAGTT CGGGCTGTTA GATCTAAGTC CCAAATGGGG GGTTTATCGC GTAGATCTAC GTCTGAAGGC GGGTATCGGT GCATTAGATC TAAAGTCGCA CAAAATTCAA AGGCACCTAG ATCTAGGGAA GTCATCGTGC CAAGCGCCAA TAGATCTATT AACACCGATT ACCCGTGTCA GCGTAGATCT AAAGATACGC CCGGGTTGAA ATGGCGTAGA TCTAATAGGC GACGGGCCCC ACATCGGCCT AGATCTACTT CGCTCGCGCA ATTGTAATAT GTTAGATCTA TGGGGTTCGG GACTAATGCG GGCGATAGAT CTAACACCCT AAACCCAAAG AAATCCAATA GATCCGAGCT CGGTACCAAG CTTGATGCAT AGCTTGAGTA TTCTATAGTG TGCACTAAAT TGCTTGGCGG TATCCTGTCT AGTTCGGTGT GGAAAAACGA GGGGTCAACA AAAACACAAA ACATTAGAGA ACCAAAAAAC ACGACTCAAC TGCGCAGCGA TACAAAATCG AAC // ID R25_0_0000142 standard; DNA; UNC; 433 BP. XX AC R25_0_0000142 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000142 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003g08.f1; XX FH Key Location/Qualifiers FH FT source 1..433 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000142_A FT misc_binding 122..155 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000142_1" FT /note="Base quality score is 1.9498e-04" FT misc_binding 155..188 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000142_2" FT /note="Base quality score is 1.1156e-04" FT misc_binding 188..221 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000142_3" FT /note="Base quality score is 2.4401e-05" FT misc_binding 221..254 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000142_4" FT /note="Base quality score is 9.6453e-05" FT misc_binding 254..287 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000142_5" FT /note="Base quality score is 2.4499e-04" FT misc_binding 287..320 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000142_6" FT /note="Base quality score is 3.3188e-03" FT misc_binding 320..353 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000142_7" FT /note="Base quality score is 3.0115e-03" XX SQ Sequence 433 BP; 115 A; 86 C; 111 G; 121 T; 0 other; GGGCAGTGAA TTGTATACGA CTCACTATAG GGCGAATTGG GCCCTCTAGA TGCATGCTCG AGCGGCCGCA GTGTGATGGA TATCTGCAGA ATTCCAGCAC ACTGGCGGCC GTTACTAGTG GATCTAGTAA TTAAATTTTA GAGTTGGAGC ATAGATCTAA TCCGGGTTCG TTTAGCATGG CACATAGATC TAAGACACGA GGTCACTGTC CTCCAGGTAG ATCTATGGGG TTGCCTACTC CTGGCTCGGC TAGATCTAAT ATGAGGATGA GACTGATTAA ACATAGATCT AGATAGCGAC TTACCAGGTA GAGCTTTAGA TCTAAGTTTA ATCTGTGCTC TATGAGGAAT AGATCCGAGC TCGGTACCAA GCTTGATGCA TAGCTTGAGT ATTCTATAGT GTCACCTAAA TAGCTTGGCG TAATCATGGT CAC // ID R25_0_0000143 standard; DNA; UNC; 836 BP. XX AC R25_0_0000143 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000143 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003g09.f1; XX FH Key Location/Qualifiers FH FT source 1..836 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000143_A FT misc_binding 124..157 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000143_1" FT /note="Base quality score is 5.5092e-02" FT misc_binding 157..190 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000143_2" FT /note="Base quality score is 4.4897e-03" FT misc_binding 190..223 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000143_3" FT /note="Base quality score is 1.7893e-03" FT misc_binding 223..256 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000143_4" FT /note="Base quality score is 9.7309e-04" FT misc_binding 256..289 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000143_5" FT /note="Base quality score is 5.8173e-03" FT misc_binding 289..322 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000143_6" FT /note="Base quality score is 2.6824e-04" XX SQ Sequence 836 BP; 315 A; 216 C; 166 G; 139 T; 0 other; GGGCGACACG CGTGATTGTA ACGGCTCACT ATAGGGCGAA TTGGGCCCTC TAGATGCATG TCGAGCGGCG CCAGTGTGAT GGATATCTGC AGAATTCCAG CACACTGGCG GCGTTACTAG TGGATCTACC GAAGCAGTTG TCGGATTGTA TTCTAGATCT AATCGAAATA GGAATTACAC GTGGACTAGA TCTACCAAAA GCCTCGCTGC CTAAACTCAT AGATCTATGC AATAGGGAGC CGCCGTTTAT ACTAGATCTA GAGTCTCGAG TACTTATAAC GCGCTTAGAT CTAAATAACC GAGTATCATC ACACCCTATA GATCCGAGCT CGGTACCAAG CTTGATGCAT AGCTTGAGTA TTCTATAGTG TCACCTAAAT AGCTTGGCGT AATCATGGTC ATAGCTGTTT CCTGTGTGAA GGGGAATACA CCAGACACAC AAGCGCACAC GATGGACACC GACAACCAAC AGCACAATCC TCAAGAACCG AACGGAACCA CACCAGCAAA CCGACACAGA CACAGGATCA CGGACCTATC CCAGACCATT AACACACACC ATACCCAACA ACACAGAAAC CACATGAAGA ACTACAACAC AAGAGACAAG AAGGAGGACA GAGACCAAGA GCGAAAATCC AAGACGAGAT AAAAAAGAAA CAAGAGCAAA ACACACACAC CGCGCTATCA CACAACAAAC AGAAGAAAAT AACCAAACTC ACAAACTAAA AAAAAAACAA ACAGGAGAAA CGATGAGAAA ACAAGAAACC ACGCAGACAT ATCACACAGA CCCTGCTCAC ACGAAAGAAT GCGAACAGCA ACATCAAACT CACCAC // ID R25_0_0000144 standard; DNA; UNC; 848 BP. XX AC R25_0_0000144 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000144 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003g12.f1; XX FH Key Location/Qualifiers FH FT source 1..848 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000144_A FT misc_binding 110..143 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000144_1" FT /note="Base quality score is 6.4043e-04" FT misc_binding 143..176 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000144_2" FT /note="Base quality score is 2.9737e-03" FT misc_binding 176..209 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000144_3" FT /note="Base quality score is 3.5635e-03" FT misc_binding 209..241 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000144_4" FT /note="Base quality score is 3.4382e-03" FT misc_binding 241..274 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000144_5" FT /note="Base quality score is 9.6919e-04" FT misc_binding 274..307 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000144_6" FT /note="Base quality score is 6.9614e-03" FT misc_binding 307..340 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000144_7" FT /note="Base quality score is 1.0550e-02" FT misc_binding 340..373 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000144_8" FT /note="Base quality score is 1.1433e-02" FT misc_binding 373..406 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000144_9" FT /note="Base quality score is 3.4413e-02" FT misc_binding 406..439 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000144_10" FT /note="Base quality score is 2.6907e-02" FT misc_binding 439..472 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000144_11" FT /note="Base quality score is 2.1600e-02" FT misc_binding 472..505 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000144_12" FT /note="Base quality score is 5.5223e-02" XX SQ Sequence 848 BP; 297 A; 195 C; 159 G; 194 T; 3 other; TGTCCGACGT ATACTATAGG GCGAATGGGC CCTCTAGGAT ACATGCTCGA GCGGCGCCAG TGTGATGGAT ATCTGCAGAA TTCCAGCACA CTGGCGGCGT TACTAGTGGA TCTACCGCAA AAACCAATAA CTTCCTATAT AGATCTAAAA GGTGACCACC GGGACAATTC AGTAGATCTA GTAAAACGTG GGTCCCAAGG CACCATAGAT CTACTCCCGG CTGATTCGGG TTTTTGTTAG ATCTACACTA TCACATCATA TAGTCCGACT TAGATCTAGA AGGGGGTGCG GCAACGTATA GTTTAGATCT ACGGCAGCTG CGCTAAGCAG TTGTTATAGA TCTAGCGTGC AAGGAGGCAG GATAGGAAGT AGATCTAAGG AGATGTGAAG GGTCGAGGGT GCTAGATCTA ACCACGGGCG ATCTAACCAT ACCTGTAGAT CTATTCTGGG GCTTTACTGG AGTGACTGTA GATCTAATGG GGCCCTTAAT TCTACAGTGA CTAGATCCGA GCTCGGTACC AAGCTTGATG CATAGCTTGA GTATTCTATA GTGTCACCTA AATAGCTTGG CGTAATCACT GTCCTAGCCT GTTTCGTTGA TANATNNGAA CACACTCACA CACCATAAAT ATAATCCATC ACAAACAAAT ACAAAATAAT AAACTATAAA CTAAAAAAAA CATACACATA CAACTACTAA AGAACAATAC AAAACACATA AACAAAAAAA CCATAACACT ACTAAAACCA CTAAACATAA CTACACATAC ACATAAAACA ACACAAATCA CACTTTAACA ATATCCACAA CCCACCACCA CCTACAGAAA TAAGAAACCA TCAACCAC // ID R25_0_0000145 standard; DNA; UNC; 800 BP. XX AC R25_0_0000145 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000145 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003h03.f1; XX FH Key Location/Qualifiers FH FT source 1..800 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000145_A FT misc_binding 124..157 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000145_1" FT /note="Base quality score is 2.6105e-04" FT misc_binding 157..190 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000145_2" FT /note="Base quality score is 6.8251e-05" FT misc_binding 190..223 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000145_3" FT /note="Base quality score is 3.3717e-04" FT misc_binding 223..256 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000145_4" FT /note="Base quality score is 5.4139e-04" FT misc_binding 256..289 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000145_5" FT /note="Base quality score is 8.2320e-04" FT misc_binding 289..322 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000145_6" FT /note="Base quality score is 1.0203e-04" FT misc_binding 322..355 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000145_7" FT /note="Base quality score is 8.3100e-05" FT misc_binding 355..388 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000145_8" FT /note="Base quality score is 2.0916e-05" FT misc_binding 388..421 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000145_9" FT /note="Base quality score is 3.6403e-04" FT misc_binding 421..453 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000145_10" FT /note="Base quality score is 4.0440e-04" FT misc_binding 453..486 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000145_11" FT /note="Base quality score is 3.2417e-03" FT misc_binding 486..519 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000145_12" FT /note="Base quality score is 2.7372e-03" XX SQ Sequence 800 BP; 225 A; 187 C; 196 G; 191 T; 1 other; AGCGCAGTGA ATTGTATACG ACTCACTATA GGGCGAATTG GGCCCTCTAG ANTGCATGCT CGAGCGGCGC CAGTGTGATG GATATCTGCA GAATTCCAGC ACACTGGCGG CCGTTACTAG TGGATCTAAT ATATTGCACG TAGACTAGCA TGGTAGATCT AGGGGTGCGT AATATCTGAA GGGACTTAGA TCTACAAGGT TTGGATGAGT GGGGGTGCGT AGATCTATGG CTTGGAGCGT GACCGCACTT TGTAGATCTA GGTGCAGGTT GCCCGCCTAA ATGTGTAGAT CTATCGACCC TAAGACCTGC CAGTTCCTTA GATCTAGGCG TTGATACGTT CTGGGCTCTA GTAGATCTAC GTGGCGTTGC ATTCTTAGTG GTACTAGATC TAACCCGAAT GCCAGATCCG TACCTAATAG ATCTATTGAT GGCTGCTTTG TTGCGGTCGT AGATCTAGTG AGGAGTCTAT AATAGCATGT TTTAGATCTA ATCTACAGAT GTAAGTGGGC CGCGGTAGAT CTAGAAGCGT ATTAAGGTGT ATTTTATTAG ATCCGAGCTC GGTACCAAGC TTGATGCATA GCTTGAGTAT TCTATAGTGT CACCTAAATA GCTTGGCGTA CTCATGGTCT GCTTCGGGGG TGTACAAAAC AGCCCGGCCC ACACCACACC ACACACAGAT TCCAGAACAA CCCACAACAA CACGAGCACC GGCACGCGCA CCACCGAACC ACACAAAACA AAGACACCAC ACCACCGAGA ACCCACAACA GACACACAAA CAGAAAGACA CAAAAACAAA // ID R25_0_0000146 standard; DNA; UNC; 769 BP. XX AC R25_0_0000146 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000146 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003h06.f1; XX FH Key Location/Qualifiers FH FT source 1..769 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000146_A FT misc_binding 128..161 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000146_1" FT /note="Base quality score is 4.1811e-04" FT misc_binding 161..194 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000146_2" FT /note="Base quality score is 7.4011e-05" FT misc_binding 194..227 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000146_3" FT /note="Base quality score is 3.4990e-04" FT misc_binding 227..260 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000146_4" FT /note="Base quality score is 3.5902e-04" FT misc_binding 260..293 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000146_5" FT /note="Base quality score is 1.2054e-04" FT misc_binding 293..326 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000146_6" FT /note="Base quality score is 2.1968e-02" FT misc_binding 326..359 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000146_7" FT /note="Base quality score is 3.5472e-02" XX SQ Sequence 769 BP; 252 A; 186 C; 181 G; 149 T; 1 other; AGAGGTGTAA CGCAGGANTG TATCGACTCA CTATAGGGCG AATTGGGCCC TCTAGATGCA TGCTCGAGCG GCGCCAGTGT GATGGATATC TGCAGAATTC CAGCACACTG GCGGCCGTTA CTAGTGGATC TAATAAAATT GGGAAAAGGA CTTATGCTAG ATCTAAAGTG CGATTACGGA AAACTTCAAC TAGATCTACG TTAACCATGG CGAGACCCGC TTATAGATCT ACAGTTTGTT GAAGTTGTGG GGCTTATAGA TCTAGGCCTT CTGGCGGGGC ATGTCAGTTT AGATCTATGA TTCTCTTCTG AGCAGAAACC GTTAGATCTA GCCGGTGAGG CTCTCTCAAC TAACATAGAT CCGAGCTCGG TACCAAGCTT GATGCATAGC TTGAGTATTC TATAGTGTCA CCTAAATAGC TTGGCGTAAT CATGGTCATA GCTGTTTCCT GTGTGAAAGG CGGGGGACTA ACAGGCCAAC ACCGCGAGCG TCACCCAAGA CAACATCCCG CGCACATCAC CCACACAACA CCTCCACTCT TACCCGACCA CAACAAATTT ACACTCTACA TTAACAACGA ACAGCCAGAC AGAGAGCAGA CACAGAATAC AAAAAAGAAA AGCATAGAGA GGAAGAAGCG AGGCAGGAGC AAACACCGGA GAAGCACCAC ACCAGCACGC CGACAAGAGA AGAAACACAA GAACCAAGCC AAGCCATACA TAACAGAAGA GCAAGAGACA GGAGTGATAA TACAACCCAC AGCACGGAA // ID R25_0_0000147 standard; DNA; UNC; 644 BP. XX AC R25_0_0000147 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000147 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003h09.f1; XX FH Key Location/Qualifiers FH FT source 1..644 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000147_A FT misc_binding 125..158 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000147_1" FT /note="Base quality score is 2.3014e-04" FT misc_binding 158..191 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000147_2" FT /note="Base quality score is 8.0718e-04" FT misc_binding 191..224 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000147_3" FT /note="Base quality score is 4.4688e-04" FT misc_binding 224..257 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000147_4" FT /note="Base quality score is 4.9302e-04" FT misc_binding 257..290 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000147_5" FT /note="Base quality score is 8.9952e-04" FT misc_binding 290..323 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000147_6" FT /note="Base quality score is 3.8591e-04" XX SQ Sequence 644 BP; 194 A; 152 C; 152 G; 144 T; 2 other; ACGCGGCAGT GAATTGTATA CGACTCACTA TAGGGCGAAT TGGGCCCTCT AGATGCATGC CGAGCGGNCG CCAGTGTGAT GGATATCTGC AGAATTCCAG CACACTGGCG GCCGTTACTA GTGGATCTAA ATTGTAAGAT TAGGGGACAT GGTGTAGATC TACTGGATCA CTTGGGAGGT ACTTCAATAG ATCTAGCAGG GGTCGGCTAT ACAGCGAGGG TAGATCTAAC ATCATGGTCG GCCTCGATTT CGCTAGATCT AAATCAAGGT GAATACAGGG GATACATAGA TCTACACGAC GTAAACCAAG CAAATGACCT AGATCCGAGC TCGGTACCAA GCTTGATGCA TAGCTTGAGT ATTCTATAGT GTCACCTAAA TAGCTTGGCG TAATCATGGT CATAGCTGTT TCCTGTGTTG AAACGGNTCC CCCGCATCCC ACACGCCACA ACAATAATCC TACGACAACA CGCGACACCA TCAGAGCTGT AAACGCACTG ATGATAGCCT ATAATGAGAT GACGCAGTAA GTCACCCATT TAAGTTAGCG ATAGCGCCTA AAATGGGCAA GATTAACAAA GATCGTGACA AACCAGATCC ATGACAGGTA CAAACACTGC ACGCGTCAAC ATGTCAACAC CCAC // ID R25_0_0000148 standard; DNA; UNC; 346 BP. XX AC R25_0_0000148 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000148 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003h10.f1; XX FH Key Location/Qualifiers FH FT source 1..346 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000148_A XX SQ Sequence 346 BP; 83 A; 66 C; 89 G; 93 T; 15 other; ACGGCGCAGT GTGATGGATA TCTGCAGAAA TTCCAAGNNC ACACTGGCGG CGTTACTAGT GGATCTCACT CACAGCTCCA GTAATACTCA TAGATCTAGA ACCCGGNNTC AAAANGNNCN AGTCAGTGCC GGTAGATCTA TTNGTTCGTT GGTAGNGTCT CGGAAGTCTA GATCTAGGGC TTAATGGGGT TGGGTGGNTC AGGTAGATCT AACATAGTTA AGGCGTCATN GTCGCTTTAG AATCCGAGCT CGGTACCAAG CTTGATGCAT AGCTTGAGTA TTCTATAGTG TCACCTAAAT AGCTTGGCGT AATCATGGTC ATAGCTGTTT CCTGTGTGAA ANNGNG // ID R25_0_0000149 standard; DNA; UNC; 608 BP. XX AC R25_0_0000149 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000149 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x003h12.f1; XX FH Key Location/Qualifiers FH FT source 1..608 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000149_A FT misc_binding 128..162 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000149_1" FT /note="Base quality score is 2.3731e-02" FT misc_binding 162..195 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000149_2" FT /note="Base quality score is 3.0430e-03" FT misc_binding 195..228 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000149_3" FT /note="Base quality score is 6.1572e-03" FT misc_binding 228..261 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000149_4" FT /note="Base quality score is 1.7247e-03" FT misc_binding 261..294 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000149_5" FT /note="Base quality score is 8.1843e-03" FT misc_binding 294..329 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000149_6" FT /note="Base quality score is 2.0272e-02" FT misc_binding 329..362 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000149_7" FT /note="Base quality score is 4.9704e-03" FT misc_binding 362..395 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000149_8" FT /note="Base quality score is 1.9218e-02" FT misc_binding 395..428 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000149_9" FT /note="Base quality score is 9.7354e-03" XX SQ Sequence 608 BP; 196 A; 135 C; 129 G; 147 T; 1 other; TGTGAAGATC GCAGTAATTG TATACGAATC ACTATAGGGC GAATTGGGCC CTCTAGAATG CATGCCGAGC GGCGCCAGTG TGATGGATAT CTGCAGAATT CCAGCACACT GGCGGCGTTA CTAGTGGATC TATCTAAAGT GTACTATCCT TCACTGCATA GATCTAGCCC ACCAGGCTTG AATTCACCAG ATAGATCTAA GAGGCTACCA CGCCGTTGCA ACAATAGATC TAAGTCTGCC GACGCACGAA ATTACGATAG ATCTATACAT GAGGTCCAGT TCCCTGATAC TAGATCTACT TTTAATGAGA GACAATGACT TGAACTAGAT CTAGGAGGTC GTATCCGGCT TACCTGGGTA GATCTAATAT GCACAATAGA CGATTCAAAG GTAGATCTAT CACATGGTAT AATTGATACA ACCCTAGATC CGAGCTCGGT ACCAAGCTTG ATGCATAGCT TGAGTATTCT ATAGTGTCAC CTAAATAGCT TGGCGTAATC ATGGGCCTAG CCGTTTCCCG GGTTGANCAG CAGATAAAAA CAAAACAAAC TGACAGAATT ACCAACAAAC CTAAGATTCA AAACAAACGA AAAACCAATA ACGGCGAA // ID R25_0_0000150 standard; DNA; UNC; 894 BP. XX AC R25_0_0000150 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000150 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x004a02.f1; XX FH Key Location/Qualifiers FH FT source 1..894 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000150_A FT misc_binding 127..160 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000150_1" FT /note="Base quality score is 6.7469e-03" FT misc_binding 160..193 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000150_2" FT /note="Base quality score is 1.0876e-04" FT misc_binding 193..226 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000150_3" FT /note="Base quality score is 2.2099e-02" FT misc_binding 226..259 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000150_4" FT /note="Base quality score is 3.9441e-02" XX SQ Sequence 894 BP; 364 A; 203 C; 172 G; 153 T; 2 other; TTGTCAAGAG CATGAATGTA TACGACTCAC TATAGGGCGA ATTGGGCCCT CTAGATGCAT GCTCGAGCGG CCGCCAGTGT GATGGATATC TGCAGAATTC CAGCACACTG GCGGCGTTAC TAGTGGATCT ACCCTTAATA GCTACTCCGC CTCCTATAGA TCTAAGGAGA CAGGAGTTTA CAGCTTCTGT AGATCTACGC GGGGGGCGTG GTTGGCAATT AATAGATCTA TTATTGCTAC TATTACAACT CTCCTTAGAT CCGAGCTCGG AACCAAGCTT GATGCATAGC TAGAGTATTC TATAGTGTCA CCTAAATAGC TTGGATGTAA TCATGGTCAT AGCTGGTTCC CTTGANNATC CGGAGCTCGG TACCCAAGGT TGATGCAATA GCTTGAGTAT TCTATAGTGT CAGCTAAATA GCTTGGCGTA ATCATGGTCA TAAGCTGGAT TCCCGTGGAA ATCGGGCACA CAGGACCGAA CAATCACAGA CAGAAAAACC ACGACAGGAC AACATGAAAA AAACCCAGAG CGCAGAAAAG CCAACAAAAG AGAAAAACAC AAAAAAACAT AGAAGATGCA CAAAAAGACA AGCAACAAGA AAAAAACACA GAACAGACAA GAAAAACACA ACAAGGAACC ACATATACAC CCTCAGAGCA CAAACACGCC AAAAAAGAAA AAACAAAAAA GAAAGCGATA CAAAGATACA AGAAAATAAA ATAATAGCGT AAGATACCCA CACGTACGGC AAAAAAGCAA ACAGCGAAAT ACGCGATACT GACAGAAACA CATCAAAATA AAAACACAAC AATAAACAGA CCAAACCAAC CACCCAAGCA ACAAAACACC CTAACAAACA CACAACACAG AGCAAGAAAG ACTAAACACA AGAA // ID R25_0_0000151 standard; DNA; UNC; 754 BP. XX AC R25_0_0000151 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000151 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x004a03.f1; XX FH Key Location/Qualifiers FH FT source 1..754 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000151_A FT misc_binding 95..128 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000151_1" FT /note="Base quality score is 7.6446e-05" FT misc_binding 128..161 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000151_2" FT /note="Base quality score is 1.3524e-04" FT misc_binding 161..194 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000151_3" FT /note="Base quality score is 9.6157e-05" FT misc_binding 194..227 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000151_4" FT /note="Base quality score is 2.1270e-05" FT misc_binding 227..260 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000151_5" FT /note="Base quality score is 7.3324e-05" FT misc_binding 260..293 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000151_6" FT /note="Base quality score is 3.4983e-04" FT misc_binding 293..326 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000151_7" FT /note="Base quality score is 1.7200e-05" FT misc_binding 326..358 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000151_8" FT /note="Base quality score is 4.8004e-05" FT misc_binding 358..391 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000151_9" FT /note="Base quality score is 2.4386e-03" FT misc_binding 391..424 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000151_10" FT /note="Base quality score is 2.5029e-03" FT misc_binding 424..457 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000151_11" FT /note="Base quality score is 1.5375e-03" FT misc_binding 457..490 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000151_12" FT /note="Base quality score is 1.9771e-03" XX SQ Sequence 754 BP; 190 A; 194 C; 189 G; 181 T; 0 other; TCGGGCGAAT GGGCCCTCGT AGGATACATG CTCGAGCGGC GCCAGTGTGA TGGATATCTG CAGAATTCCA GCACACTGGC GGCGTTACTA GTGGATCTAG ACTTTGCTAT GAAGGCCCTT CAGATAGATC TAAGGACATA GGGAGCAGCT GCGACAATAG ATCTAGCGGC ATTTAAAAAC TGGAGATCGT TAGATCTACA AATCCTGGGG GACGCCTGCT CCTTAGATCT ACTAACGAGA GATCAAACTG CCCTGATAGA TCTAGGGAAT GTAGGGGCCA GCGAGACGAT AGATCTACGA GGCGAGCCAA GCTAGGGACA GCTAGATCTA CTTTTCGCGG TGGGGTTAGT GAATTAGATC TACCAACGCC CGCCGCCTCC CAACAATTAG ATCTAATAGG AACGTGTGGG TGGTAGGTAC TAGATCTACA TGTACAACGG GTAATGTGTC TGTTAGATCT ATCTTAACCA AACCACCGTA CCCTGTCAGA TCCGAGCTCG GTACCAAGCT TGATGCATAG CTTGAGTATT CTATAGTGTC ACCTTAATTG CTTGGCGTTA TCCTCGTCAT AGCTCTTCCC TATGTTAACA TTGTCACGCG GTCCCAATAC ACACCAGCAT TGAGACTGCA CACATTAGGT GCAGCCGGGG GGACACAAGG GAGCTACCCC ATCTTAGTTG GCCACGCCCT TCCGTCGGAC CTTCTGTGTA CCGCGGGACT GCCAAACCTC TGCTCAACCA CCACTTTCAC CGCT // ID R25_0_0000152 standard; DNA; UNC; 827 BP. XX AC R25_0_0000152 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000152 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x004a06.f1; XX FH Key Location/Qualifiers FH FT source 1..827 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000152_A FT misc_binding 118..151 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000152_1" FT /note="Base quality score is 6.1980e-03" FT misc_binding 151..184 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000152_2" FT /note="Base quality score is 2.5239e-04" FT misc_binding 184..217 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000152_3" FT /note="Base quality score is 4.9308e-04" FT misc_binding 217..250 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000152_4" FT /note="Base quality score is 4.8464e-04" FT misc_binding 250..283 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000152_5" FT /note="Base quality score is 8.4014e-03" FT misc_binding 283..316 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000152_6" FT /note="Base quality score is 4.6510e-04" FT misc_binding 316..349 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000152_7" FT /note="Base quality score is 1.5181e-04" FT misc_binding 349..382 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000152_8" FT /note="Base quality score is 3.4516e-04" FT misc_binding 382..415 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000152_9" FT /note="Base quality score is 8.0686e-04" FT misc_binding 415..448 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000152_10" FT /note="Base quality score is 9.7529e-03" FT misc_binding 448..481 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000152_11" FT /note="Base quality score is 1.2354e-03" FT misc_binding 481..514 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000152_12" FT /note="Base quality score is 9.0399e-03" XX SQ Sequence 827 BP; 262 A; 189 C; 189 G; 178 T; 9 other; GGAGGATGTA TACGACTCAC TATAGGGCGA ATTGGGCCCT CTAGATGCAT GCTCGAGCGG CCGCCAGTGT GATGGATATC TGCAGAATTC CAGCACACTG GCGGCCGTTA CTAGTGGATC TAATTGGTAC AACTATGAGG ATGGCGGTAG ATCTAATCGA TAACCGTTGC AACTGAACAG TAGATCTAAT TGGTTCTGCA ACCACACGGC CCGTAGATCT AGGTCAAAAA ACCTGTCGAG GGCTACTAGA TCTAAAGGCT GAACGGCGTG GCTGAAGGGT AGATCTATTG CGGGCGTCAG AGTGTGGGAG GCTAGATCTA GGAATTGTGT CGTGGTTTCT TGGTTTAGAT CTAACCACCG ATTCTCTCTA CCCCAAACTA GATCTAGCGC GGTATGCAAG TGGAGGAATA TTAGATCTAT CCGCGACTTG AAATTGGAGC ATTGTAGATC TATTGTTTGA CGAGCCTGAC GTTTTTCTAG ATCTAGTACA TGACCTCACC CACGTGCGGT TAGATCCGAG CTCGGTACCA AGCTTGATGC ATAGCTTGAG TATTCTATAG TGTCACCTAA AATAGCTTGG CGTGATCCTG GTCCTAGCTG TCATGGGGGT AAACCAACGA CCAGGACTCA CATAGAAAGA CAGCAGAGCA TAACAACAAG CAACGGATCA ACAACAAGAA GCACAAAACC ACAAACACCA AAAAGATAAA CAGACACAAC TACGCAAACA GAAACAGAAA GAAAAACACT ACACCACCAA AAAGCACAGC CACACGATCG AAAACAAAAC AATAAACACC ACTCATATTA CCCTCANANN NNNNNNC // ID R25_0_0000153 standard; DNA; UNC; 752 BP. XX AC R25_0_0000153 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000153 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x004a07.f1; XX FH Key Location/Qualifiers FH FT source 1..752 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000153_A FT misc_binding 117..150 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000153_1" FT /note="Base quality score is 2.4099e-04" FT misc_binding 150..183 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000153_2" FT /note="Base quality score is 1.3695e-04" FT misc_binding 183..216 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000153_3" FT /note="Base quality score is 7.3533e-05" FT misc_binding 216..248 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000153_4" FT /note="Base quality score is 2.2357e-05" FT misc_binding 248..281 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000153_5" FT /note="Base quality score is 6.3737e-05" FT misc_binding 281..314 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000153_6" FT /note="Base quality score is 2.1732e-05" FT misc_binding 314..347 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000153_7" FT /note="Base quality score is 1.1874e-03" FT misc_binding 347..380 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000153_8" FT /note="Base quality score is 2.0595e-04" XX SQ Sequence 752 BP; 213 A; 209 C; 151 G; 179 T; 0 other; GTGAATGTAT ACGACTCACT ATAGGGCGAA TTGGGCCCTC TAGATGCATG CTCGAGCGGC CGCCAGTGTG ATGGATATCT GCAGAATTCC AGCACACTGG CGGCCGTTAC TAGTGGATCT ATCTACAATC TCTTAAACGG ACGACATAGA TCTATCAAAT CACAGGTCTC GTATCATCCT AGATCTAGCT ACAATCACTG CATGCGCCAT ATTAGATCTA CCCGGTGCTC GAAGGTTTGT AGATTAGATC TACCACAAGC AGACGCCACG ACGCTACTAG ATCTAGCCCT CCCGTTAACC TTCCTCATAT TAGATCTAAC TTAGTCTCTG CCCACGTTTT CTTTAGATCT AATATAGAGG GCGTGTATGC TGATGATAGA TCCGAGCTCG GTACCAAGCT TGATGCATAG CTTGAGTATT CTATAGTGTC ACCTAAATTG CTTGGCGTAA TCATGGTCAT AGCTGTTTCC TGTGGTGAAA TTGTCGCCAG GTCACACCTC GACACGACTT ACGAGTCTGG AGCATTAAGT GTCAGCCTGG GGTGCTAATG AGTAGCAACT CACATTATTG CGTTGCGACC CTGTGCCGCT TTCAGACGGG AAACCCGTTG TGACTGGGAC ACCCTGAAGC AACAAACAAC ACACACACCG ATCACGCCAC ACACCATTCT ACAACACAAA AACCCACAGA CACACAACCC CCGACAACAC ACCATACCAT ACAAACACAC CACCGTACAA CACAGACACA CA // ID R25_0_0000154 standard; DNA; UNC; 964 BP. XX AC R25_0_0000154 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000154 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x004b02.f1; XX FH Key Location/Qualifiers FH FT source 1..964 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000154_A XX SQ Sequence 964 BP; 448 A; 258 C; 117 G; 133 T; 8 other; TTGTACTCGA CTCACTATAG GGCGAATTGG GCCCTCTAGA TGCATGCTCG AGCGGCGCCA GTGTGATGGA TATCTGCAGA ATTCCAGCAC ACTGGCGGCC GTTACTAGTG GATCCGAGCT CGGTACCAAG CTTGATGCAT AGCTTGAGTA TTCTATAGTG TCACCTAAAT CGCTTGGCGT AATCATGGTC ATAGCTGTTT CCTGTGTGAA AACGCCGCGA GGGTTCCCCC AGTCACGAGC GCCAGGGATC CCCCAAATCA CGACCGCCAG GAACACCCCA GACCAAACGG AAAAGGATAC CACAAAAAAC AAAGGACACG ACAAACACAA TACAAAAACA CAACAACCAC CCAAAAAAAA AAAAAAAAAA CAAACCACCA ACCAAACAAA AAAAAAAACG AAAAAAACAA AAAAAAAAAA AAAACAAAAA TACACACACA ACTAAACATA CTAATACAAA ATTACCAGAA AACAGTAATA ACTATATAAC CACACCAACA ACAAACACCT CAAAAAAACA AAAATAATAA CATGAATTAC ACAACATACA CAAATACAAC ATTAATCTAG AAAAAAAGCA ACAACCAATG ACCACACACC AACCAACCCA CACAATCATC CCATACAAGA AACACATAAA ATCATCCACA CATCACAGTC AACAAACATC AAACACACAG AAAGCAAGCA GCACACAAAC ACACAACAAC ATACGAAAAT AATAGTCGAA AACAATAAAC ACAAGTAAGA CAACAAATCA CACAAACAAA CCCAAACTAA ACCAATACGA AACATCAAGA AGCCATACAA ACAAACATCC CATACAAGAA CAAACACACA ACAAATAGAA TCAACAGAGA GACAACTAAC CGCATCATCC TCTCTTCCTC ATCTCACCCT CCNTCCTATN NNNNGNAGAT CAATCAGAAA TCAGAGACAA ATAAGAGCAA GCAAGACANA ACAA // ID R25_0_0000155 standard; DNA; UNC; 769 BP. XX AC R25_0_0000155 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000155 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x004b08.f1; XX FH Key Location/Qualifiers FH FT source 1..769 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000155_A FT misc_binding 113..146 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000155_1" FT /note="Base quality score is 4.3424e-02" FT misc_binding 146..179 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000155_2" FT /note="Base quality score is 4.8586e-02" FT misc_binding 179..212 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000155_3" FT /note="Base quality score is 1.4810e-02" FT misc_binding 212..245 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000155_4" FT /note="Base quality score is 2.3441e-02" FT misc_binding 245..278 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000155_5" FT /note="Base quality score is 2.0320e-02" FT misc_binding 278..311 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000155_6" FT /note="Base quality score is 2.6283e-02" FT misc_binding 311..344 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000155_7" FT /note="Base quality score is 2.2577e-02" FT misc_binding 344..377 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000155_8" FT /note="Base quality score is 4.5334e-02" FT misc_binding 377..410 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000155_9" FT /note="Base quality score is 5.8220e-02" FT misc_binding 410..444 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000155_10" FT /note="Base quality score is 6.3785e-02" FT misc_binding 444..477 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000155_11" FT /note="Base quality score is 1.2845e-02" XX SQ Sequence 769 BP; 247 A; 176 C; 140 G; 206 T; 0 other; ATGATGTATA CGATCACTAT AGGGCGAATT GGGCCCTCTA GATGCATGCC GAGCGGCCGC AGTGTGATGG ATATCTGCAG AATTCCAGCA CACTGGCGGC CGTTACTAGT GGATCTAACT CGTTTGTACA TTAAAGAAAG CGTAGATCTA TGTGTTGGAG TAGGTGATGG CTTTTTAGAT CTACACAATC GATCCAGGTC AGATGGGATA GATCTACAAC CATCAATTCA AATTCAACGA CTAGATCTAC GCCATCACTC TGCACCTAAA AAGCTAGATC TACAGCACAC GGAACAAGAG GCTCGCATAG ATCTAGATGT GAACCCGCGC TTCTCATTTT TAGATCTCAT ACAGGTGTCG GGATGGTTTG CTATAGATCT AGTGAATGCG CAGTCCTGGA TCGTTGTAGA TCTAGCAAGA CGCCGAGTTT GTTTCATGAA TAGATCTATG TACTCGAATT TGGTTGTCTC CATTAGATCC GAGCTCGGTA CCAAGCTTGA TGCATAGCTT GAGTATTCTA TAGTGTCACC TAAATAGCTT GGAGTAATCT TGGTCATAGC TTTTCCCTGT GTGAAAAGCC CCAGTGTACC TCCTAACACG CAACTTCAAA AAAAAAATCA TCTCTATCAC TACACAATAC AAACAATCAA CCACAGAACT CAACACACAC TACTACCATA ACTATATAAA AACATACACT AATTAAAAAT TAATCACATT CAATCAATAT AACACAACAA TCATCATACA CTATCACAAA CATACCTAC // ID R25_0_0000156 standard; DNA; UNC; 427 BP. XX AC R25_0_0000156 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000156 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x004b09.f1; XX FH Key Location/Qualifiers FH FT source 1..427 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000156_A FT misc_binding 124..157 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000156_1" FT /note="Base quality score is 1.4625e-04" FT misc_binding 157..190 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000156_2" FT /note="Base quality score is 1.5593e-04" FT misc_binding 190..223 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000156_3" FT /note="Base quality score is 9.8338e-05" FT misc_binding 223..256 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000156_4" FT /note="Base quality score is 2.6559e-05" FT misc_binding 256..289 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000156_5" FT /note="Base quality score is 1.2500e-04" XX SQ Sequence 427 BP; 123 A; 87 C; 101 G; 113 T; 3 other; GTAAACGCAG TGAATTGTAT ACGACTCACT ATAGGGCGAA TTGGGCCCTC TAGATGCATG CCGAGCGGCG CCAGTGTGAT GGATATCTGC AGAATTCCAG CACACTGGCG GCGTTACTAG TGGATCTACA TGTTATTGTA GTGATGGCTC AAATAGATCT ATGGTTTAAT TTAGTAGCCA GAATGTTAGA TCTAGGGGCA GTGGATGGAT GGTTAGCCGT AGATCTAGCT GATAAACGCC ATGCCCATTC CATAGATCTA TGAAAGTCTG CCCCGTTCGT AATCTTAGAT CCGAGCTCGG TACCAAGCTT GATGCATAGC TTGAGTATTC TATAGTGTCA CCTAAATAGC TTGGCGTAAT CATGGTCATA GCTGTTTCCT GTGTGAANNN CAAACCGACA CACCTCAAAG AAAAAAAAAA AACAAAC // ID R25_0_0000157 standard; DNA; UNC; 783 BP. XX AC R25_0_0000157 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000157 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x004c04.f1; XX FH Key Location/Qualifiers FH FT source 1..783 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000157_A FT misc_binding 122..155 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000157_1" FT /note="Base quality score is 1.8498e-03" FT misc_binding 155..188 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000157_2" FT /note="Base quality score is 8.2156e-05" FT misc_binding 188..221 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000157_3" FT /note="Base quality score is 9.0748e-05" FT misc_binding 221..254 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000157_4" FT /note="Base quality score is 5.8001e-03" FT misc_binding 254..287 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000157_5" FT /note="Base quality score is 2.7076e-04" FT misc_binding 287..320 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000157_6" FT /note="Base quality score is 7.5291e-04" FT misc_binding 320..353 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000157_7" FT /note="Base quality score is 1.1324e-04" XX SQ Sequence 783 BP; 245 A; 191 C; 176 G; 170 T; 1 other; CAGGCAGTGA ATGTATACGA CTCACTATAG GGCGAATTGG GCCCTCTAGA TGCATGCTCG AGCGGCGCCA GTGTGATGGA TATCTGCAGA ATTCCAGCAC ACTGGCGGCC GTTACTAGTG GATCTAGCCC ACTACGTGTA TCGTGATTTT ATAGATCTAA TGTTCGGGGT GCCAGAGAGG AATATAGATC TAGTTGACGG GCGGGAGCTG GGTGGAGTAG ATCTATTGCA CCTAATCAAG GAACTTCCTT TAGATCTAGC CTGGCGGTCA CCAAATGAAT TCTTAGATCT AGTACCAGAC CCCGCCCGCC AAAAGTTAGA TCTATGGTAA GTTCAAGCTG TAGTAGTCGT AGATCCGAGC TCGGTACCAA GCTTGATGCA TAGCTTGAGT ATTCTATAGT GTCACCTAAA TAGCTTGGCG TAATCATGGT CATAGCTGTT TCCTGTGTTG ACATTGGAAT CGCGCCCACT CATCCCCACA CAACTATTAC GACGCTGGAC GCATTCATGT GTCAACACCT GGGTTGCCTA ATTGGAGTTG ACCAAACTCC ACCATCAAAT TCGCGTTAGC GCCTCACGTG CACTGCATTT CCAAGATCGC GAACACCGTG TCGTGACTGG GAAAGCCTTG GACGCNAAAC ACCGAAAGAC AAGATACCCA CCAACACAAC ACCATCCAAC GACAACAATA AACATAAACA CAACAAAAAC AACAACAAGA AAGAGGACAC AAACAAGAAC ACACGAGATA AAAATACAGA ACAGGCAAAA GAAGCAAACA GAA // ID R25_0_0000158 standard; DNA; UNC; 848 BP. XX AC R25_0_0000158 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000158 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x004c07.f1; XX FH Key Location/Qualifiers FH FT source 1..848 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000158_A FT misc_binding 114..146 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000158_1" FT /note="Base quality score is 2.5735e-04" FT misc_binding 146..179 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000158_2" FT /note="Base quality score is 9.8745e-05" FT misc_binding 179..212 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000158_3" FT /note="Base quality score is 8.9609e-05" FT misc_binding 212..245 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000158_4" FT /note="Base quality score is 2.6690e-05" FT misc_binding 245..278 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000158_5" FT /note="Base quality score is 4.9987e-05" FT misc_binding 278..311 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000158_6" FT /note="Base quality score is 2.9106e-04" XX SQ Sequence 848 BP; 292 A; 214 C; 173 G; 168 T; 1 other; TGAATGTATA CGACTCACTA TAGGGCGAAT TGGGCCCTCT AGATGCATGC CGAGCGGCGC CAGTGTGATG GATATCTGCA GAATTCCAGC ACACTGGCGG CCGTTACTAG TGGATCTACA CTTTGGTTTG ATCATCACCA ACTAGATCTA GGAGAACACC CGGATCTGGA ACAACTAGAT CTATTCGTCG CGAGAGGATG GAAGAAACTA GATCTAAGAC ACATGGATCG TCTCCGAATA CTAGATCTAA CCACTTTCCC TCTGCCTGCT CAATTAGATC TAGTATTGAC TACGAGCTCA TGCGTGTTAG ATCCGAGCTC GGTACCAAGC TTGATGCATA GCTTGAGTAT TCTATAGTGT CACCTAAATA GCTTGGCGTA ATCATGGTCA TAGCTGTTTC CCTGTTGTGA AAGCGCGACG GGTACACAAT GACAACACAA CATACAGAGC CGCCACCCCT CAACGTGTCA AGCACTGCGC TGCCAAATGA GTGACGCAAC TCACATCAAT CGCGTTGCGC TCAATGCCCG CTTTACAGCT CGGGAAACCT GTCGTGACTC GGACAACCTG GGCGACCAAA CAAGACAACC CCAAGCACAC ACACAACAAA AAAATAGGAG CAACACATGG AAAGCAGAGA ACATCAAGAG AAACCAGATA CAAAAAAATC ATGATAAGAA AATAGAAACA GAGCAGACAC ACGAATAGAG GAAACAGCAA GATCACACTA CAGACTCTAC AAGAACACAC CAGACTAAAA GAACAAGTCC AAGCAAAAGA GAAAAACCTA AGTAGACCTT CTGCATCTCA TTATTTCTAT ANACAACAAA AACCGCACTA GAAACCCA // ID R25_0_0000159 standard; DNA; UNC; 846 BP. XX AC R25_0_0000159 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000159 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x004c10.f1; XX FH Key Location/Qualifiers FH FT source 1..846 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000159_A FT misc_binding 125..158 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000159_1" FT /note="Base quality score is 4.7273e-03" FT misc_binding 158..191 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000159_2" FT /note="Base quality score is 8.3841e-03" FT misc_binding 191..224 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000159_3" FT /note="Base quality score is 3.5927e-02" FT misc_binding 224..261 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000159_4" FT /note="Base quality score is 1.1678e-02" FT misc_binding 261..294 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000159_5" FT /note="Base quality score is 1.7428e-02" FT misc_binding 294..327 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000159_6" FT /note="Base quality score is 3.3258e-02" FT misc_binding 327..360 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000159_7" FT /note="Base quality score is 2.9607e-02" FT misc_binding 360..393 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000159_8" FT /note="Base quality score is 3.7745e-02" XX SQ Sequence 846 BP; 255 A; 254 C; 124 G; 213 T; 0 other; CCCCTGATTC GCAGGATGTA TACGTTCACT ATAGGGCGAA TTGGGCCCTC TAGATACATG CTCGAGCGGC TGCAGTGTGA TGGATATCTG CAGAATTCCA GCACACTGGC GGCGTTACTA GTGGATCTAA TGCACACTTA ATCCCCTAAA TTCATAGATC TACACAAACT ACAACCCGCC TCCCCCGTAG ATCTAAACAG CTTCCTCCCA TAAATAACAC TAGATCTAAC TCCGCAACAG CATGTCCGTC TCTCGACAAG ATCTAGGTTT CTTTGGCGCG TGGATCAGTG TAGATCTATC GTGACCCGGG AGCGTCCATT CTCTAGATCT AAGTGTGGTT GGGATTAGTT AGGAGATAGA TCTACTTCCC TGATTTTCCT TGAGTCTGAT AGATCCGAGC TCGGTACCAA GCTTGATGCA TAGCTTGAGT ATTCTATAGT GTCACCTAAA TAGCTTGGCG TAATCCTTGT CATAGCTCTT TCCTGTGTGA AATCCCCGCG GGTGTACCAC AGAGAAACCA CCCACCGATA TTTCCACCCC ATACACAACC CCACATATTT CCCACTCAAC ACAAAAACTA TCCCACCACA TCCTACCTAA TCCAAGCCTA ACCACCCCTA TTCATAACTA CATACCAAGA TATAACATCA ACAAAGTCTT ACTCGTTACT CAATCCATAC TAACACACCA CTCCATCAAC ACAGCTCACC ACCCACATAT CATAGTAGCA TATCACCTAC ATAAATCATA GCCTATCAAC TCCACTAACA ACATCAAGTA TCACTCAGCA CTCACACACA AACTCAAATT ATATATACAT ACTAACTACC CCATCCAACC AACTAC // ID R25_0_0000160 standard; DNA; UNC; 454 BP. XX AC R25_0_0000160 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000160 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x004d02.f1; XX FH Key Location/Qualifiers FH FT source 1..454 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000160_A FT misc_binding 114..147 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000160_1" FT /note="Base quality score is 2.0435e-04" FT misc_binding 147..180 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000160_2" FT /note="Base quality score is 4.2581e-05" FT misc_binding 180..213 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000160_3" FT /note="Base quality score is 3.6455e-05" FT misc_binding 213..246 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000160_4" FT /note="Base quality score is 2.9836e-05" XX SQ Sequence 454 BP; 129 A; 87 C; 112 G; 121 T; 5 other; ATGATGTATA CGACTCACTA TGGGCGAATT GGGCCCTCTA GATGCATGCT CGAGCGGCGC CAGTGTGATG GATATCTGCA GAATTCCAGC ACACTGGCGG CCGTTACTAG TGGATCTATT CAATGCAGCG TAAGAAGTGT ATGTAGATCT AAACCACATC CGCGCCCGAT CGACAATAGA TCTAGGGCTG GGGGTTGACG TAGTTATATT AGATCTATAT TTGAGGGTAG GGTTTTATTT CATAGATCCG AGCTCGGTAC CAAGCTTGAT GCATAGCTTG AGTATTCTAT AGTGTCACCT AAATAGCTTG GCGTAATCAT GGTCATAGCT GTTTCCCTGT GTGACNNNNN GTAAAGCAGC AACAAAATTT TTGAAAACAA AGCATTACGA AGCCCGGCAC AGACATTATA AGTTGATAAA CGCACTAGAG GGGTTGCCAT AAATTGAAGT AGAA // ID R25_0_0000161 standard; DNA; UNC; 833 BP. XX AC R25_0_0000161 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000161 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x004d03.f1; XX FH Key Location/Qualifiers FH FT source 1..833 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000161_A FT misc_binding 116..149 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000161_1" FT /note="Base quality score is 4.3879e-04" FT misc_binding 149..182 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000161_2" FT /note="Base quality score is 6.9219e-04" FT misc_binding 182..215 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000161_3" FT /note="Base quality score is 2.1199e-04" FT misc_binding 215..248 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000161_4" FT /note="Base quality score is 4.7609e-05" FT misc_binding 248..281 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000161_5" FT /note="Base quality score is 3.6124e-05" FT misc_binding 281..314 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000161_6" FT /note="Base quality score is 9.2499e-05" XX SQ Sequence 833 BP; 269 A; 211 C; 201 G; 151 T; 1 other; TTGAAAAAGC AGTGATGTAT ACGACTCACT ATAGGGCGAA TTGGGCCCTC TAGATGCATG CTCGAGCGGC GCCAGTGTGA TGGATATCTG CAGAATTCCA GCACACTGGC GGCGTTACTA GTGGTATCTA ACGGGTCGCC ATAACTAGAT CTATGACCTT CTGTGAGGGC CACCTAGTTA GATCTAAAGC CGCTTCAGCA TCCGATCAAG CTAGATCTAA ATCGACTAGT TGGTTGCCGG CCAGTAGATC TATGAAAGGG GCGCTGCAGA ATTATGCTAG ATCTAGTTTA GCGTTTCCTT CCCTGTAGGA TAGATCCGAG CTCGGTACCA AGCTTGATGC ATAGCTTGAG TATTCTATAG TGTCACCTAA ATAGCTTGGC GTAATCATGG TCATAGCTGT NTCCTGTGTG AAATTGCCGC CAGCTCACAA TGCGACAAAA CATAGCGAGA CGGACGCATA CAGTGTCACG ACCGGCAGGT CCCTACTGAC GTGAGCCAAC TCACTTTCAT TCGACTAGCG CCCACTGCCC GCATTCCAAG ACGGGAACAC CCTGCACGTG ACTGGCAACA CACCTGGGCT GAACAAACAA ACAACACAAC ACGAGACAAT AATACGCAGA GCACACACAA AAGACGAAGA CGTAGCACAA AGCAAAGTGG ACGAGGAACC GAGCGCAACA AAGCAAGACA CGACTAGCGA ACAAAAAAGA AGCAAAGACA GAGCACGCGA ACACCAGGCT GAGCCGTCAA ACTCGGCAGA TACGCCACGA AAAGCAGAGC AAAAAAGCAA CATACGCGAG GAAGAACGAA GAGAACACAG ACCACGAATA ACA // ID R25_0_0000162 standard; DNA; UNC; 845 BP. XX AC R25_0_0000162 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000162 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x004d08.f1; XX FH Key Location/Qualifiers FH FT source 1..845 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000162_A FT misc_binding 125..158 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000162_1" FT /note="Base quality score is 5.2450e-04" FT misc_binding 158..191 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000162_2" FT /note="Base quality score is 2.8970e-04" FT misc_binding 191..224 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000162_3" FT /note="Base quality score is 2.2968e-04" FT misc_binding 224..257 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000162_4" FT /note="Base quality score is 2.2998e-04" FT misc_binding 257..290 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000162_5" FT /note="Base quality score is 6.7749e-05" FT misc_binding 290..323 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000162_6" FT /note="Base quality score is 6.3290e-04" FT misc_binding 323..356 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000162_7" FT /note="Base quality score is 1.8968e-04" FT misc_binding 356..389 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000162_8" FT /note="Base quality score is 4.1276e-04" FT misc_binding 389..422 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000162_9" FT /note="Base quality score is 5.1874e-03" FT misc_binding 422..455 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000162_10" FT /note="Base quality score is 1.5281e-03" XX SQ Sequence 845 BP; 277 A; 167 C; 226 G; 175 T; 0 other; TAACAGCAGT GAATGTATAC GACTCACTAT AGGGCGAATT GGGCCCTCTA GATGCATGCT CGAGCGGCCG CCAGTGTGAT GGATATCTGC AGAATTCCAG CACACTGGCG GCCGTTACTA GTGGATCTAC AAATGATAGT GAAGCGTTGC CCCCTAGATC TAAAGGGGTG GTCGACAGCC CTGGGGATAG ATCTAATGTT GAGTAGTGGG GTTAGTTCTG TAGATCTAAC AAGCATTAGG CGGCGTAGGA AGGTAGATCT AATTCCTTGG GGTTCTAGGC GACTAGTAGA TCTATGGCAT GTTGTGCATT ATATGGTGGT AGATCTAGGC AGAGAGGAAG CGTTTGATAA TGTAGATCTA GTGACTTAAA TCGCTTGCCA TGGTTTAGAT CTAAGCTAGC CTCGCTGGGG TTGAAAGATA GATCTATTGG TTTTTCTCAC ATATCACGTG GTAGATCCGA GCTCGGTACC AAGCTTGATG CATAGCTTGA GTATTCTATA GTGTCACCTA AATAGCTTGG CGTAATCATG GTCATAGCTT GTTCGGGGTT GAAACCAAAC AACGAGAACA AAAACGAAAA AAGAGATAGA AAACAAAAAA CAGAAAAGGA AAAACATGGG GTATATACGA TCATCGAACT AACTAAGAAA GAGAGGAGAC ACACAGACGC CCGAGAAAGG AAGAAGAGCG AAGAGACAAG TCGAGCACAC CCAAAAGACC AGGACGCAAT ACAGACAACT ACACACAGAA ACGGACACGA CAGCGGACCA GACAACAAGC AAGATAGCAC GGAGGATCCG AGCAAGGCGA CCCACAACGC AGTGTTCCAC CGCAGAGGAA AGGCA // ID R25_0_0000163 standard; DNA; UNC; 852 BP. XX AC R25_0_0000163 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000163 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x004d09.f1; XX FH Key Location/Qualifiers FH FT source 1..852 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000163_A FT misc_binding 115..147 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000163_1" FT /note="Base quality score is 2.3732e-04" FT misc_binding 147..181 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000163_2" FT /note="Base quality score is 8.6597e-05" FT misc_binding 181..214 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000163_3" FT /note="Base quality score is 1.9255e-04" FT misc_binding 214..247 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000163_4" FT /note="Base quality score is 2.8981e-04" FT misc_binding 247..280 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000163_5" FT /note="Base quality score is 4.0652e-05" FT misc_binding 280..312 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000163_6" FT /note="Base quality score is 2.2525e-04" FT misc_binding 312..345 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000163_7" FT /note="Base quality score is 2.2727e-04" FT misc_binding 345..378 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000163_8" FT /note="Base quality score is 2.0757e-04" FT misc_binding 378..411 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000163_9" FT /note="Base quality score is 4.2444e-04" FT misc_binding 411..444 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000163_10" FT /note="Base quality score is 1.0287e-03" FT misc_binding 444..477 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000163_11" FT /note="Base quality score is 8.7236e-04" FT misc_binding 477..510 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000163_12" FT /note="Base quality score is 1.4629e-02" XX SQ Sequence 852 BP; 272 A; 209 C; 180 G; 188 T; 3 other; AGGAATGTAT ACGACTCACT ATAGGGCGAA TGGGCCCTCT AGATGCATGC TCGAGCGGCC GCCAGTGTGA TGGATATCTG CAGAATTCCA GCACACTGGC GGCGTTACTA GTGGATCTAA CCACGAACTT CTAAGTGTAG ATATAGATCT ACAGGGATCA CACACGCCAG AAACGCTTAG ATCTAGGGAT GTGGATACGG TTCGTGTCGT TAGATCTAGT GCCTATTAGG GAGCATGGTC GGATAGATCT ACAGGGACCT CTGACTGAAT CTAACCTAGA TCTAGGGGGA CCGAAGAGAA GGGTGGGATA GATCTAACGG TGACCTTACA CGAGACTTGA ATAGATCTAG CAGATGAAAA TCGGCTCCGC GATTTAGATC TAGTTTACTG GGTTCGATAG GACGATGTAG ATCTACTTTC TCACCTCCCC TTACGTTTGA TAGATCTAGC CCGATAAGAT TCACGCCACT AGTTAGATCT ATCGTTCACT TCTGTCTATT ATATATTAGA TCCGAGCTCG GTACCAAGCT TGATGCATAG CTTGAGTATT CTATAGTGTT GCACCTAAAT AGGTTGGGGT AAACCTTGGC ATTAGCTGTT CGGGGGGAAA ACCTGCCACA CGACACACAT CCGAGCAAAT ACTCTGACCA TCACACATAA TCACAACACA GGACTACCAC CACATACAGA ACCAAATCAA TGAACCGCAA CAGACCGTCT AAATCCACAC ACCTACGCCA ACACACCAGA GCACCACCAC AACCAACAGA CAACACAAGA GAACACACAC GACAAAAACA ACAACAAGAA AACATAGGAA TCAAATACAT CACCTAACAT TACGTCACAN NN // ID R25_0_0000164 standard; DNA; UNC; 902 BP. XX AC R25_0_0000164 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000164 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x004d12.f1; XX FH Key Location/Qualifiers FH FT source 1..902 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000164_A XX SQ Sequence 902 BP; 366 A; 275 C; 127 G; 133 T; 1 other; CGGGGAAACG CGGACTGTAA CGACTCACTA TAGGGCGAAT TGGGCCCTCT AGCATCATGC CGAGCGGCGC CAGTGTGATG GATATCTGCA GAATTCCAGC ACACTGGCGG CCGTTACTAG TGGATCCGAG CTCGGTACCA AGCTTGATGC ATAGCTTGAG TATTCTATAG TGTCACCTAA ATAGCTTGGC GTAATCATGG TCATAGCTGT TTCCTGTGTG AAAATGCCGG CAGGGTCCCC CCAGACACGA GCGAGAGGGT CCCCCCACGT GACGACCGCG CAAGGACAAC ACCAAACCAA ATCGACAACA AAACACCACA TTCACTACGA GCTACTGTCA AACCCTATCA TCTCACAACA CTAAGCGCAC CACACAACCA CACACCACAC AGCAACAACA AACAAGCACA CAATCAAACT GGAAACGCGC ACAACTCAAA CAAAAACTAA TTATCACACA ACACTACCAA TGACACCACA AAAACGCAGA CAATCTACAA CACCCCACAA TAAATACAAA AACACATAAC ACCACACCAC ACAGCACACC ATATAAAAAA CACACACGAT ATTACCCACC CTATAAAAAT CACCCACAAC AACTACCATA TACAAACACA AAACGTCTCA AAACAAAAAA TACAACAAAC CAACCCCTAC CTCCCTCGCC ACTACATACA CATAACAAGT AACTCCATGA TCAACCAATA GCCACAATAA CATAACTAGA TACCAGACTA GCAACGACAA CTAACACCTA AACAACGCAA TGAAGTAAAA CCGAACCAAC AACACAAAGC ATAGACTACA CTGACACAAA AACACAAAAC AACAAACACA GAATACTAAC AACACTTATT GACTGTGAGA CATAATACCA CAACAGCCAC AGNAAGGAGA GA // ID R25_0_0000165 standard; DNA; UNC; 641 BP. XX AC R25_0_0000165 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000165 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x004e02.f1; XX FH Key Location/Qualifiers FH FT source 1..641 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000165_A FT misc_binding 115..148 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000165_1" FT /note="Base quality score is 4.2699e-02" FT misc_binding 148..181 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000165_2" FT /note="Base quality score is 4.4105e-02" FT misc_binding 181..214 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000165_3" FT /note="Base quality score is 1.2544e-04" FT misc_binding 214..247 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000165_4" FT /note="Base quality score is 2.9636e-05" FT misc_binding 247..280 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000165_5" FT /note="Base quality score is 3.5139e-05" FT misc_binding 280..313 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000165_6" FT /note="Base quality score is 2.6554e-02" FT misc_binding 313..346 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000165_7" FT /note="Base quality score is 3.1068e-02" XX SQ Sequence 641 BP; 214 A; 176 C; 135 G; 115 T; 1 other; TGAATGTATA CGACTCACTA TAGGGCGAAT TGGGCCCTCT AGATGCATGC TCGAGCGGCG CCAGTGTGAT GGATATCTGC AGAATTCCAG CACACTGGCG GCCGTTACTA GTGGATCTAT TGATCAGTGA CATCAGAGGT AATCTAGATC TACACATTCT ATTACAGGTG AAGGCTCTAG ATCTAGCATT ATACGGACAA ATCAACTCCG TAGATCTAGC ACACCGAAAT GACGGATCCC TCATAGATCT AGAGGAAGCG CCGCCCTTAA TGAAGTTAGA TCTAGCTATG TGAAGTGGGA AATTCGGTAT AGATCTAAAA CGAGACCCCG AACATTACCA TGTAGATCCG AGCTCGGTAC CAAGCTTGAT GCATAGCTTG AGTATTCTAT AGTGTCACCT AAATAGCTTG GCGTAATCAT GGTCCTAGCC GTTTCCGGGG TTGAACNGCA GACAACGCAG ACCAACCCGC ACCGGAACAC ACAGAACCAC ACACAAACAC CAGAACGAAC AGAAGAACGC CAAAGAACAC AACGCACGCA CACCTCACGC CGCAGCACAC AAGACCCGCA CACAACACCG AACACAGACC CCACAAAGCA CACCGACACA CACAAGAACG AAAACACCCA ACAGAAAACA C // ID R25_0_0000166 standard; DNA; UNC; 1126 BP. XX AC R25_0_0000166 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000166 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x004e09.f1; XX FH Key Location/Qualifiers FH FT source 1..1126 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000166_A XX SQ Sequence 1126 BP; 492 A; 278 C; 209 G; 141 T; 6 other; CGCGGCAGTG AATTGTATAC GATCACTATA GGGCGAATTG GGCCCTCTAG ATCATGCTCG AGCGGCCGCA GTGTGATGGA TATCTGCAGA ATTCCAGCAC ACTGGCGGCC GTTACTAGTG GATCCGAGCT CGGTACCAAG CTTGATGCAT AGCTTGAGTA TTCTATAGTG TCACCTAAAT AGCTTGGCGT AATCATGGTC ATAGCTGTTT CCTGTGTGAA AATGCCGCGA GGGTCCCCGC GAGATCACGA GCGCGAGAGG GATAAACCGC AAGACGAAAG AGCAGAAGAG CGAACGCCAC ACACAGAAGC CAAGATAAGC AACGCAAACA AAAATGGCAA AAAAACAGAA GACAAATCAC ACAAAAGAAT GCAAACAAAG AGCACACAGA AAACAACTAA AAAAAAACAA AAAACAACTA AAAAAACACA AAAGAAACAA ACACAAACGA AAAGAAAACA AAAGCACAAC ACACAATAAC AAAACCAAAA CAACACGCAT AACCTCCATA AATGAAACAA AAAGCAGAAA TACATATAAC AAACCAAGCA GGACAACAGC ATATATACAA AAAAAACATA TATACCACCA CCCACACACA GACTACATAA CTAACAGCGA TGAAGACGAA ACCATGTATA TATTAACAAC ACAATACTGA CTACAACGAC TCCTAATAAG ACCATCTCGA CATACTAAGT CCGCTGCTAA TATATAACAG TCTGACCACA AACATACAAC ACAACAAACA CTAGAACAAA CGAGATAGCA AGAGCTAGAG ATACAGACAT AGCACGAACA TGAAACAACT AAACTCATAA ACGAAGAAAT ATAGAACAAG TATAGACCAA CAACCCGTAA AGGACGGCAG CGACAGGAGG AACTAGAGAA CCAAGCACCA GACAGGAAGC AGAAGTGAGA AACCAAACCA AGACGAACAG CACTAGAACA GCACGAGACA CAGCACACAC AGACACAACC GAACCACGAA CACTAAGCAA GCAATTACAC CGAACCACAA CGCTCAGGCG GAGAAAGCGC AAGCACGCAT AGATAGACTG AATACACAGA CCAGACGCCG CCAGGCTTAC NNNNGGACNA CGCAAGCCCA GAACCAGTAC ACGANG // ID R25_0_0000167 standard; DNA; UNC; 810 BP. XX AC R25_0_0000167 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000167 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x004f01.f1; XX FH Key Location/Qualifiers FH FT source 1..810 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000167_A FT misc_binding 125..158 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000167_1" FT /note="Base quality score is 1.5596e-04" FT misc_binding 158..191 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000167_2" FT /note="Base quality score is 5.1188e-05" FT misc_binding 191..224 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000167_3" FT /note="Base quality score is 7.7372e-03" FT misc_binding 224..257 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000167_4" FT /note="Base quality score is 5.5869e-03" XX SQ Sequence 810 BP; 294 A; 162 C; 194 G; 160 T; 0 other; GTCAACACAG CAGTGATGTA TACGACTCAC TATAGGGCGA ATTGGGCCCT CTAGATGCAT GCCGAGCGGT CGCAGTGTGA TGGATATCTG CAGAATTCCA GCACACTGGC GGCGTTACTA GTGGATCTAA ATTGACTTAA CTAGAGTGGC TTGGTAGATC TAGTGGTCAC ACGGGGGGCG AAAATATTAG ATCTAGTACT TCCACTGTCT CGGAGGTCCC TAGATCTAGC TAAAGGTAGC TTTCGGGCTT ACATAGATCC GAGCTCGGTA CCAAGCTTGA TGCATAGCTT GAGTATTCTA TAGTGTCACC TAAATAGCTT GGCGTAATCA TGGTCATAGC TGTTTCCTGT TGTGAACACG AGATCTACCG AAGCCACTTC TAGTTAAGTC AATTGAGATC CACTAGTAGG GGGCGCCAGT GTGCTGACAC TTCTGCAGAT CTCCATCACA TGGGGGGCGC GTCAAGCCTG GCTTCTAAAG GGCCAAATCC GCCCAATAGT GAAGTCGAAT AACAATTCAC TGGCCGTCGT TTCACAACGT CGTGACTGGG AAAACCTGGT TGACAAACAA ACAAAGATAA AGAGAAAGAG AAAAAGAAAA GAAAAAGAAA AACAAAAAAA AAAGGAAAAA GGAAAAACAA AAAGCAGGAG AACACGTAGA ATACGATTGC ATAGAAAGAA AAAAAAACAG GAAGAGAAAC GAAAGAAAGA GGAAAAATAA CAATCAAGAC CAGACATCAG AACAACAAAA GAACACGAAT ACGAGCAAAT AGAAATGACT CACCACAGAG CACGGAAGAG AGACCACTAT // ID R25_0_0000168 standard; DNA; UNC; 614 BP. XX AC R25_0_0000168 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000168 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x004f02.f1; XX FH Key Location/Qualifiers FH FT source 1..614 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000168_A FT misc_binding 120..153 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000168_1" FT /note="Base quality score is 2.4908e-04" FT misc_binding 153..186 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000168_2" FT /note="Base quality score is 6.7210e-04" FT misc_binding 186..219 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000168_3" FT /note="Base quality score is 1.4667e-04" FT misc_binding 219..252 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000168_4" FT /note="Base quality score is 4.7036e-03" FT misc_binding 252..285 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000168_5" FT /note="Base quality score is 1.0058e-02" FT misc_binding 285..318 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000168_6" FT /note="Base quality score is 3.4231e-03" FT misc_binding 318..351 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000168_7" FT /note="Base quality score is 3.6645e-04" FT misc_binding 351..384 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000168_8" FT /note="Base quality score is 1.5766e-03" FT misc_binding 384..417 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000168_9" FT /note="Base quality score is 1.6315e-02" FT misc_binding 417..450 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000168_10" FT /note="Base quality score is 4.2363e-04" XX SQ Sequence 614 BP; 186 A; 133 C; 138 G; 153 T; 4 other; ACGCAGTGAA TGTATACGAC TCACTATAGG GCGAATTGGG CCCTCTAGAT GCATGCCGAG CGGCGCCAGT GTGATGGATA TCTGCAGAAT TCCAGCACAC TGGCGGCCGT TACTAGTGGA TCTAAGGTTG GAGTGGCTTA TTTTAGTACT AGATCTAGTG CTAGAGAGTT CGCCGGTTTA TGTAGATCTA GGAAATCTGC TAGACCCAAT CCACTTAGAT CTAAGCTCTC GGTTATCTAC AGACCACATA GATCTAGGGG CCGGTGGACC GGGTCGTTGG TTAGATCTAA AGATGCCGAT TCCCCCCCAC GAAGTAGATC TATGTTAGAT CAGATCGGCG TGAAGGCTAG ATCTAGTTCC CCCTTACCCT AATTCTTGCA TAGATCTAGA TCAACTAGCA CCCAGCTCAC ATGTAGATCT AAATGGTGTT CAAGTATTAG AGTAGCTAGA TCCGAGCTCG GTACCAAGCT TGATGCATAG CTTGAGTATT CTATAGTGTC ACCTAAATAG CTTGGCGTAA TCCTGGTCCT AGCCTTTTCC TGGTGTGAAN NGNNACACGC ACAAAAAATC AAAAAAAAAA AAAAAAAAAA AAAAAAAAAC ACAAAACACG AAAA // ID R25_0_0000169 standard; DNA; UNC; 747 BP. XX AC R25_0_0000169 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000169 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x004f04.f1; XX FH Key Location/Qualifiers FH FT source 1..747 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000169_A XX SQ Sequence 747 BP; 229 A; 194 C; 138 G; 186 T; 0 other; GCGCATGAAT GTATACGACT CACTATAGGG CGAATGGGCC CTCTAGATGC ATGCTCGAGC GGCGCCAGTG TGATGGATAT CTGCAGAATT CCAGCACACT GGCGGCCGTT ACTAGTGGAT CTACCGGGTT TCGGGAGTGA CACTTGATAG ATCTCTTCTG CGCCCCTGTC TGTCGCGAGA TATATCTCTC GCGGTACTTT TGAATTAGTC CGCTATATCT ATGTGTCTCG GCCTTGTTGT GAAGCGTTTG AGTCTCCGCG CGGGGGGGTC CCCTATTTAG CTCTATACTC TACTGGCGGG GGGGGACGTT GCTCTATATA TCTCTTGTGT CTCGATGTAA CAATGCTGTT TTGATCTCTG TGTTTTATAC CTCCGGGGTG TGGTCTATCC GCGCTCTGTA CCACGCGTCT GTAGTGCATA GTCGTGTAGT ATCTCTATTG TCACCTATAT AGTCGTTGTG GTAATCACTG TGTCCTAGCT CTTCCTTGGG TTAAACCGGC TACAACCCAA CCCCAAAACC CAAACACATA AAAAAAAAAA AAACAACAAA ACAACACCAA AAAAAAATAG ATAAAAAAAC AATTAAGAAA AACAAAAACA CTATCAACTT AGAACCCACA GAAAAAAAAC CCTAATTCAC AACACAAACA CACTATCCAA ACAACACACC ACCACACATA CTAACACTAC ACATCACACA CACTACTTAC TAACACCACC ATCAAAACAT ATAAAACCAA CACAACA // ID R25_0_0000170 standard; DNA; UNC; 873 BP. XX AC R25_0_0000170 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000170 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x004f06.f1; XX FH Key Location/Qualifiers FH FT source 1..873 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000170_A FT misc_binding 127..160 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000170_1" FT /note="Base quality score is 2.5321e-02" FT misc_binding 160..193 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000170_2" FT /note="Base quality score is 1.5949e-03" FT misc_binding 193..226 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000170_3" FT /note="Base quality score is 9.0173e-04" FT misc_binding 226..259 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000170_4" FT /note="Base quality score is 6.2743e-04" FT misc_binding 259..292 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000170_5" FT /note="Base quality score is 1.0908e-03" FT misc_binding 292..324 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000170_6" FT /note="Base quality score is 8.9399e-04" XX SQ Sequence 873 BP; 315 A; 232 C; 175 G; 148 T; 3 other; TCGTAACAAG CAGGAATGTA TACGACTCAC TATAGGGCGA ATTGGGCCCT CTAGCATGCA TGCCGAGCGG CGCCAGTGTG ATGGATATCT GCAGAATTCC AGCACACTGG CGGCCGTTAC TAGTGGATCT AATGCCGATG CGATAGTATG CGTTTATAGA TCTACACGAG ATTAGTCTTT TTTGCGGGAT AGATCTAACC CTGTTGTCGA GGGGAACTTT TATAGATCTA TGGGTTCGTA GCGGCAACTT CAGTGTAGAT CTAACGGCTA TATACGCATC TCGTATCGTA GATCTAAGCC ACCACTTCTT GCGGACCCAT TAGATCTAGC ATACCAACGT CTTCTTAATG TCTAGATCCG AGCTCGGTAC CAAGCTTGAT GCATAGCTTG AGTATTCTAT AGTGTCACCT AAATAGCTTG GCGTAATCAT GGTCCTAGCT TTTTTCCCTG TGTGTGACAN NGCACGACCA CCACCACACA ACACACACAA CAACAGACAG AGAACCAAAC ACACAACACA ACAACGACAA CACAGCACAC AAGAAGACAC ACNACACGAC ACAAGCAACC ACAAACAAGA GAAAAAGGGC AACACCATCA ACACAGAACA GGAAGACGAA GATGAAGCGC AAACCCAACA ACATCATAGG AGAACACTAC AAGAGAGCAG AACCACAAAC ACAGACCGAG ACAGAAGCCC GACAACAACG CACGACCAAA AAAACAAAAA CATCAACAAC TACACAGCTA CACTGCACTA ACAGACAACC GAAACAGACA CAACACGCAG GCACGAAGCG ACAGCAGCAA TCAACGCGCA GACACAACAC AGAAGAAAGG ACCAGGGCTT AGAACAACCA CACACCAGAA GAA // ID R25_0_0000171 standard; DNA; UNC; 855 BP. XX AC R25_0_0000171 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000171 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x004f08.f1; XX FH Key Location/Qualifiers FH FT source 1..855 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000171_A FT misc_binding 116..149 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000171_1" FT /note="Base quality score is 1.7320e-02" FT misc_binding 149..182 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000171_2" FT /note="Base quality score is 5.4512e-04" FT misc_binding 182..215 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000171_3" FT /note="Base quality score is 1.1430e-03" FT misc_binding 215..248 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000171_4" FT /note="Base quality score is 6.1807e-03" FT misc_binding 248..281 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000171_5" FT /note="Base quality score is 1.9133e-03" FT misc_binding 281..314 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000171_6" FT /note="Base quality score is 9.6821e-04" FT misc_binding 314..347 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000171_7" FT /note="Base quality score is 4.6123e-02" FT misc_binding 347..380 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000171_8" FT /note="Base quality score is 3.3052e-02" XX SQ Sequence 855 BP; 317 A; 175 C; 211 G; 150 T; 2 other; NGTGAATGTA TACGACTCAC TATAGGGCGA ATTGGGCCCT CTAGATGCAT GCTCGAGCGG CGCCAGTGTG ATGGATATCT GCAGAATTCC AGCACACTGG CGGCGTTACT AGTGGATCTA ATCACCATAT GAATTGAAGC CACTATAGAT CTAGGGCGTT TAGAGGAGGA TCCAGGTTTA GATCTAACGC TCTATCACGA ACTCTATGCT GTAGATCTAT AATTCTGTAG GGGGGAGACG GGCGTAGATC TAGCCTTGGG CCGGGTCATA GCCATTTTAG ATCTACATGT TATCTGACGT CCGAACTTGG TAGATCTAGC CTGCTAGACA AGACGATCTG TCGTAGATCT ATTAATAAAC CCGGGAAGAG GATGTGTAGA TCCGAGCTCG GTACCAAGCT TGATGCATAG CTTGAGTATT CTATAAGTGC ACCTAAATAA GTTTGGCGAA TCATTGGCCT AAGTTTTTCC CTGGGGAGCA GGGAACGAGG ACACCACGGA GAACCAACTA GAAGAGCAAA CGAAAAAAAG ACAACACAGG ATACCAAAAA AACAAACAAC ACAAACACAT ACACAAACAA ACCAAGCAAG ATAAACAAAA AAAAAGTAGG GCACAGAGAA AACCGAAGAT AATAGCAAAT AAAAGACAAG CAGACACGAC AGGGCAAGCA AACGCAACAG CAGAGAGACT GACGACAAAG AAAGAGAAAC AAAGCAACGA GCGAAACGAC AAGGAAAGAG AGAATGAAAA GACAAAAATG AGCGAGAGAA GAGGACCAAC CGCAGCAAAG CAGCCATAAT AGTTGATTAG TGTCAGCNGC AGAGCGGCTA CGCCGAAGGA GCACACGACA CAAAA // ID R25_0_0000172 standard; DNA; UNC; 641 BP. XX AC R25_0_0000172 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000172 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x004f11.f1; XX FH Key Location/Qualifiers FH FT source 1..641 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000172_A FT misc_binding 121..154 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000172_1" FT /note="Base quality score is 1.1659e-03" FT misc_binding 154..187 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000172_2" FT /note="Base quality score is 7.0799e-03" FT misc_binding 187..220 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000172_3" FT /note="Base quality score is 1.4514e-03" FT misc_binding 220..253 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000172_4" FT /note="Base quality score is 3.1375e-04" XX SQ Sequence 641 BP; 216 A; 156 C; 148 G; 121 T; 0 other; AAAAACGCAG GATGTATACG AGTCACTATA GGGCGAATTG GGCCCTCTAG CATCATGCCG AGCGGCGCCA GTGTGATGGA TATCTGCAGA ATTCCAGCAC ACTGGCGGCG TTACTAGTGG ATCTATTATA CACCATCTCG TCATCTTCCA TAGATCTAAT ATGCCACTGT CCGATACCAG TAGTAGATCT AGGCAGTTAA TGCCTGCTAC TGGGCATAGA TCTATGGAAT CATGCCGTTA ACCCCCGATT AGATCCGAGC TCGGTACCAA GCTTGATGCA TAGCTTGAGT ATTCTATAGT GTCACCTAAA TAGCTTGGCG TAATCATGGT CATAGCTGTT TCCTGTGTGA AAGCGCCGCG AGGGTCCCCG CAGTCACGAC CGCGAAGGGT TCCCCCACAC ACGAGCGACA GGGGTACCCA AAATAAGCGA GAAAGGGGAG ACCCAATCAA GAGAGAAAAG AGCCCACACA AAAGTACACT GCAATGACAC CATCAAGACA CAAGGAACAG AGCACAGATA AACAGAGAAA GTCCATAGCG GAAGTAAAAG ACACCAAACT GACCTGAGCA CTAGGAGAAG GAAAGCAAAC AATCATAAAA CCAAACCAAC AAATATACAT GTGAACAACA AGAATAACCG G // ID R25_0_0000173 standard; DNA; UNC; 726 BP. XX AC R25_0_0000173 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000173 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x004g03.f1; XX FH Key Location/Qualifiers FH FT source 1..726 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000173_A XX SQ Sequence 726 BP; 362 A; 174 C; 104 G; 86 T; 0 other; TTGTTAAAGG CAGTGAATGT ATACGACTCA CTATAGGGCG AATTGGGCCC TCTAGATGCA TGCTCGAGCG GCTGCAGTGT GATGGATATC TGCAGAATTC CAGCACACTG GCGGCCGTTA CTAGTGGATC CGAGCTCGGT ACCAAGCTTG ATGCATAGCT TGAGTATTCT ATAGTGTCAC CTAAATAGCT TGGCGTAATC ATGGTCATAG CTGTTTCCTG TGTGAAAGCG CCGCCAGGTC TCTACGCAGC TCACGAGCAC GACGAGATCC AAGCAAACAC AGACGGACGG GGACGCCACA GCAACAGAAG CAAAACAACA ACAACACACA GAGCCACAAC ACAACCAAAA ACAAAAAAAA AAAAACGCCA ACGCACCAAC AACCACACAC CACGAAAAAA CAAAAGAAAG AAAAAAAAAG AAAACCAAAC AACAAACCAA AAAAAAAACC AACACTAGAA AAAATCAGAA ACAAAAAAAG CCAGAGAAAC CGCAAGACCA ACAAAGAAAA AGAACAAGCA CAACATACAC ACAAAATAAA ACAAAAAAAC AAAAAAAAAC AACAAAAAAC AATTAAACAA CCCAAACACA CATCAAAAAA AAAAAGAATA CAAACCAAAA ATAAATAAAA ATAACTAACA AAACCACAAA AACAACAACC AAAACACACA AACAAACAAA ACACAACAAA CACACCTATA TAATAAAAAC AAATAAAACC AAAAAC // ID R25_0_0000174 standard; DNA; UNC; 637 BP. XX AC R25_0_0000174 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000174 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x004g08.f1; XX FH Key Location/Qualifiers FH FT source 1..637 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000174_A FT misc_binding 275..308 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000174_1" FT /note="Base quality score is 1.8553e-05" FT misc_binding 308..341 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000174_2" FT /note="Base quality score is 4.1476e-04" FT misc_binding 341..374 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000174_3" FT /note="Base quality score is 1.0951e-04" FT misc_binding 374..407 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000174_4" FT /note="Base quality score is 1.9575e-04" FT misc_binding 407..440 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000174_5" FT /note="Base quality score is 3.1325e-05" FT misc_binding 440..473 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000174_6" FT /note="Base quality score is 2.7649e-04" FT misc_binding 473..506 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000174_7" FT /note="Base quality score is 5.5346e-03" XX SQ Sequence 637 BP; 178 A; 134 C; 157 G; 165 T; 3 other; GCATGAATGT ATACGACTCA CTATAGGGCG AATTGGGCCC TCTAGATGCA TGCTCGAGCG GCGCCAGTGT GATGGATATC TGCAGAATTC CAGCACACTG GCGGCCGTTA CTAGTGGATC TAGTTAACCC AGCTGTAACT CCTCTCATAG ATCTAGCTGT CTCGGGGTTG TAGAAATATT TAGATCTAAA TTAGACCACC TCTCCGGTGT GCATAGATCT ATTAGGGCGT CATCGGCCCC GGGATGTAGA TCCGACATAC AGAAGAGATG GAAGATCTAG TGGGTTGATA GGAGTTAGGA CGATTAGATC TATTCTTAAG AACCTGATCC CCTGGCGTAG ATCTAAATCA TGAGGTTCAG CCGCCCATCG TAGATCTAGT CTCATTTGAG GCTCGAAGGT ATGTAGATCT ACATGTTGCA TGAATCTGGT GAGCGATAGA TCTAGGCTAA CCGAAAGCGA TGGTGACTGT AGATCTAACA GGCTCTTGCC CCACGGTATA CGTAGATCCG AGCTCGGTAC CAAGCTTGAT GCATAGCTTG AGTATTCTAT AGTGTCACCT AAATAGGTTG GGGTAATCCT GGTCCTTTCG TTCGTGTGTA AAANNNAACA CAAAAAAAGA CAAACACAAA AAAAACA // ID R25_0_0000175 standard; DNA; UNC; 786 BP. XX AC R25_0_0000175 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000175 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x004h10.f1; XX FH Key Location/Qualifiers FH FT source 1..786 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000175_A FT misc_binding 107..140 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000175_1" FT /note="Base quality score is 1.4120e-04" FT misc_binding 140..173 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000175_2" FT /note="Base quality score is 1.2005e-02" FT misc_binding 173..206 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000175_3" FT /note="Base quality score is 1.4697e-02" FT misc_binding 206..239 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000175_4" FT /note="Base quality score is 5.0189e-02" FT misc_binding 239..272 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000175_5" FT /note="Base quality score is 2.9454e-02" FT misc_binding 272..305 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000175_6" FT /note="Base quality score is 1.7821e-01" FT misc_binding 305..339 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000175_7" FT /note="Base quality score is 1.4690e-01" XX SQ Sequence 786 BP; 239 A; 170 C; 194 G; 182 T; 1 other; AATGTATAGG ATCACTATAG GGCGAATGGG CCCTCTAGAT CATGCCGAGC GGCGCAGTGT GATGGATATC TGCAGAATTC CAGCACACTG GCGGCGTTAC TAGTGGATCT AGATCATCCT CTCCTAATAT TCACTGTAGA TCTATCTGCT CAGTTGGATC GGCTAACGAT AGATCTAAAT ATGTGGGGGT CCGAGAGTTG CGTAGATCTA TTAACACTTG CGGAAACGGG CCTCTTAGAT CTAAGCTCCT GAGGGCGTCC TTAATGTGTA GATCTATATA CGAGGTGATA GTCTTGACGG TTAGATCTGA TGTTATAGAG GGCCGGACTG TTGCATAGAT CTAGCAATCA ACTTAGCTCT CATGACATAG TAGATTCCGA GCTCGGTACC AAGCTTGATG CATAGCTTGA GTATTCTATA GTGTCACCTA AATTGCTTGG CGTAATCCTT GTCATAGCTG TTTCCTGTGT GAAAATCGCG CCAGGATACC ACCAGACAAG AGCGACGGGG TTACCACTAA TCAAAATCAA CAGAGAGAGC ACAAACAACA CAAGGAGATG GGATGCAGAT AGCGCAGAAA AACAAAAAAC GCAGGAAGGA TATCATTACA GGCTAGACGA TCATACCCGA GTACAGACTA CATAGCGAGA TAAGTCGCGG GCGACCCATG ACGAACATCG AGTTACGAAT CGATCTACAA GGGATGACCA GCAAAACAGT TAACTACATC AGAGCCAAGC GAGAGCTAGA AAAGAANCGC TATATATCCG CGTCCAGTCG TGCGAC // ID R25_0_0000176 standard; DNA; UNC; 602 BP. XX AC R25_0_0000176 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000176 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005a04.f1; XX FH Key Location/Qualifiers FH FT source 1..602 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000176_A FT misc_binding 132..165 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000176_1" FT /note="Base quality score is 4.0883e-02" FT misc_binding 165..198 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000176_2" FT /note="Base quality score is 5.3966e-03" FT misc_binding 198..231 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000176_3" FT /note="Base quality score is 3.4625e-04" FT misc_binding 231..264 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000176_4" FT /note="Base quality score is 6.3000e-04" FT misc_binding 264..297 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000176_5" FT /note="Base quality score is 9.0646e-03" FT misc_binding 297..330 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000176_6" FT /note="Base quality score is 1.1480e-02" XX SQ Sequence 602 BP; 180 A; 163 C; 137 G; 120 T; 2 other; ATCGCGGGAA AACGAGAGTG ATGCATACGT TCACTATAGG GCGAATTGGG CCCTCTAGCA TGCATGCTCG AGCGNGCGCA GTGTGATGGA TATCTGCAGA ATTCCAGCAC ACTGGCGGCC GTTACTAGTG GATCTATATN GCGCTATTTT CCCAATGTTT TTAGATCTAA CAGGGCGACG GCAGTTGCAC GCCCTAGATC TAATAAGCCG ATATGGTATA TTTCGCGTAG ATCTAGCAGA GTGACGGGCA GTGGGTTACT TAGATCTAAA ATGACCACCG CCTCTCTCTT GGCTAGATCT ATGCAAGCGG GGAGAAGGAT ATAATGTAGA TCCGAGCTCG GTACCAAGCT TGATGCATAG CTTGAGTATT CTATAGTGTC ACCTAAATAG CTTGGCGTAC TCATGGTCAT AGCTGTTTCC TGTGTGAAAC CGCCGCCAGG GTCCCCGCAG TCACGACCGA CAGGCTCACC CAAGATCACG ACAGCAAAGG AAAACACAAA ACAAGAAAAG CAAAGCAAAC CCAAACATCG ACGCCACACA AAAACACACC CCAGAAACCA CACCCCACAC ACACACCCCC ACACCACACA AGACAGCACA CC // ID R25_0_0000177 standard; DNA; UNC; 742 BP. XX AC R25_0_0000177 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000177 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005a05.f1; XX FH Key Location/Qualifiers FH FT source 1..742 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000177_A FT misc_binding 152..185 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000177_1" FT /note="Base quality score is 1.6298e-03" FT misc_binding 185..218 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000177_2" FT /note="Base quality score is 2.3113e-02" FT misc_binding 218..251 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000177_3" FT /note="Base quality score is 1.2749e-03" FT misc_binding 251..284 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000177_4" FT /note="Base quality score is 4.3384e-03" XX SQ Sequence 742 BP; 304 A; 163 C; 149 G; 126 T; 0 other; TTTAAAGGGT AAAGGCAGGA TGTAACTAAC ACTATAGGGC GAATTGGGCC TCTAGATGCA TCTCGAGCGG CGCCAGTGTG ATGGATATCT GCAGAATTCC AGCACACTGG CGGCGTTACT AGTGGATCTA ATTAACGGAG TCGGTTAGGA GATCTATACT CCTAAGTCTG TAAGAACATT ATAGATCTAC CCCTATGGAG GCCCTGCGTA TACCTAGATC TATTGCGATT CAACTCGATA CGAATTCTAG ATCTAAAGTA ATTCATATAG TGGCCGGCCA TAGATCCGAG CTCGGTACCA AGCTTGATGC ATAGCTTGAG TATTCTATAG TGTCACCTAA ATAGCTTGGC GTAATCATGG TCATAGCTGT TTCCTGTGTG AAAGCGCCGA GAGGATACCC GCAGATCACG ACCGCGAGGG ATTACACAGA CAGGAGCGAG AGGATTCACC CAAACGAAAA AGAAAAAACA AACAAAGTAG CGAACAAAAA GAGCACACAA AATAAGGACA AAACGCACAT AACAATAACA AAAACACAAA AAACAAACAC AACAAAAACA AACGACAAAA AAGAAAACAC ACGGACCACG CAAACATAAT GCAACACCGA AAAAAAGACA GAGCCCAAAG CAAACCATAA ACCCGAACTC AAGAGAACAA ACAAATCGAA GGAACAACAA ATAGAGAAAA AAATAAAAGA AAATACGACG AGAGAAACAC CCAAGCAACA CACATCAACA CA // ID R25_0_0000178 standard; DNA; UNC; 809 BP. XX AC R25_0_0000178 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000178 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005a09.f1; XX FH Key Location/Qualifiers FH FT source 1..809 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000178_A FT misc_binding 146..179 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000178_1" FT /note="Base quality score is 9.4522e-03" FT misc_binding 179..212 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000178_2" FT /note="Base quality score is 9.5932e-03" FT misc_binding 212..245 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000178_3" FT /note="Base quality score is 8.8701e-02" FT misc_binding 245..278 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000178_4" FT /note="Base quality score is 3.3231e-02" FT misc_binding 278..311 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000178_5" FT /note="Base quality score is 1.8314e-02" XX SQ Sequence 809 BP; 287 A; 168 C; 140 G; 213 T; 1 other; AAGGTCGAGG ATGAATAGAT TCACTATGGG CGAATCGGGC CTCTAGATGC TGCTCAGCGG CGCCAGTGTG ATGGATATCT GCAGAATTCC AGCACACTGG CGGCCGTTAC TAGTGGATCT ATTCTCCAGG AACATCATAG TGTAGATCTA TTAAGATGCG GATAGTATGA GGGACTAGAT CTAGTTTGGA AATGTCGTTG GATGGTCTTA GATCTAAGCC GGAGAACGAG TATATTGTAC GTAGATCTCA ATTAATGGGT GGTGACGGGC GAGGTAGATC TAGATATAGA GATTTGTATG GTGTGGTTAG ATCCGAGCTC GGTACCAAGC TTGATGCATA GCTTGAGTAT TCTATAGTGT CACCTACATT GCTTGGCGTA ATCTTGGTCA TAGCTGTTTC CTGTGTGAAA GCGCCGAGAG GGTCCCCCGA GTCAAGACCG CCAAGTATTC ACACATGTTA AAGACCAGAC AATTACTCCA CATATCCAAG CAACTACATC ACATCATACA TCCAAACAAA TCATCTTCAG CTCCATCACT ACCATAATTA TATCTAACAT CATACCACTC TCACATCACT ACTTTCAATC ACACTCTAAC TCATACACGA CTAACAGTAC AAGAAATATA ATAAAATAAT AATCATTACA ACAACATAGA TACCACAATC AAACAATACT CATAACAATA CTAAATTAAA TCACATCACA TATAAACATA ACAGTAAAAA ATAAATAACA ATCATAAAAA CATAAGTAAA ATACATAATT ACTAAATACA TAACATACAT AAAATAACTC ATATCTTTN // ID R25_0_0000179 standard; DNA; UNC; 867 BP. XX AC R25_0_0000179 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000179 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005b02.f1; XX FH Key Location/Qualifiers FH FT source 1..867 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000179_A FT misc_binding 127..160 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000179_1" FT /note="Base quality score is 1.3798e-04" FT misc_binding 160..193 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000179_2" FT /note="Base quality score is 1.4662e-04" FT misc_binding 193..226 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000179_3" FT /note="Base quality score is 1.4141e-03" FT misc_binding 226..259 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000179_4" FT /note="Base quality score is 1.4575e-03" FT misc_binding 259..292 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000179_5" FT /note="Base quality score is 5.5105e-04" FT misc_binding 292..325 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000179_6" FT /note="Base quality score is 7.5756e-04" FT misc_binding 325..358 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000179_7" FT /note="Base quality score is 5.6543e-03" XX SQ Sequence 867 BP; 374 A; 224 C; 122 G; 146 T; 1 other; GGCAGTTTAA AGCAGTGATG TACACGATTC ACTATAGGGC GAATTGGGCC CTCTAGATGC ATGCTCGAGC GGCGCCATGT GATGGATATC TGCAGAATTC CAGCACACTG GCGGCGTTAC TAGTGGATCT AGCGCTTAGG AACAGCCTGA TGGTATTAGA TCTACGGCCT GGACTACCAT GAAGGGTAAT AGATCTAAAC CCTATGACCA TGTAGCTACC CATAGATCTA ATTTGATATA AGCGTTGCCT CCCAGTAGAT CTAACTGGTT CTCCCGCCCC CCCCTGCCTA GATCTATTCG TTTTTGGCTG GGTTTTCTAT GTAGATCTAC CTTCATTTTT AAAGCTGGAG ACCCTAGATC CGAGCTCGGT ACCAAGCTTG ATGCATAGCT TGAGTATTCT ATAGTGTCAC CTAAATAGCT TGGCGTAATC ATGGTCATAG CTGTTTCCCG GTANACCCCC GAACAGAGAT AAAACAACAA CACAACAAGA AAAATCAAAA ACAGAACAAC AACAACACAA CCAAACACAA CCAATAGAAA ACAAACAAAA AACAACAAAC AACAAAGACT AAACAAAAAC ACACAAGAAA CAAACAAAAA ACAAACAAAC AAAACAACAA ACACAACAAA AAAAGAAAAA ACACAAATAA CAAAAAAACA AAACAACAAA AACAAATACC AAAAAACAAC AACACAACAA ACCAAACAAC CCACACCCCA CAACACCCCC AAAAACCAGA ACACAACAAA AGAAAAAAAA CAACAAATAA CACACAAAGA ACCAAAAACA CAAGAACAAG TAAACACTTC TAACCACTCA CTAAAAAGCA ACAAATAGCA CCACCACACA CAACCACATC ACCAAAC // ID R25_0_0000180 standard; DNA; UNC; 1050 BP. XX AC R25_0_0000180 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000180 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005b03.f1; XX FH Key Location/Qualifiers FH FT source 1..1050 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000180_A XX SQ Sequence 1050 BP; 420 A; 282 C; 123 G; 225 T; 0 other; TGTATACGTT CACTATAGGG CGAATAGGGC CCTCTAGATA CATGCTCAGC GGCGCCAGTA GTAGATGGAT ATCTAGCAGA ATTCCAGCAC ACTGGCGGCC GTTACTAAGT GGATCCGAGC TCGGTACCAA GCTTGATGCA TAGCTATGAG TATTCTATGT GTCACCTAAA ATATGCTTGT GCTGTAATAC TTATGTACAT AAGCTAGTAT TCCTAGTGTA GAACATCTGT CCGCCGAGGG TCACCTCCCG ATGATCAACG TACGCGCCCA GTGGAATTCT ACCGCAGAAA TCACGAACCA GCCATACTCG GTCAGCACAC CAATATAATA GACGCAAGTC AACACCCCAC CACTAACGAA ATAACATAAA CAATAAATAC AACACTAACT GACAACTGCA ATTGCTACTT AATACAAACA AAATATCTAA ACATCATGAC GTACACAGTC ACGAACATCA CAACTGTCAT ACCACATTGT TTTTCTATCT CCACATCACT TCCTCACCAT ACTACTCAAT ATACGAACCA TCACTCATTT TATCTCTACT TCTAACCCAT ACCTGAACAC ACACATCATA ACACACACGA CCAACTATAA TACGAGAAGT AGCAGACCTT ATCATCCACA CAGCATTTCA TTACACCACA TACATATCTA ATATCTCTAC ACACATCTAC CCGAGCACAA TAACCATAGA TCTATCAAAT AAATACTAAA TAAAAAAATT AATAACCGAC CAAATAACAA AAAACTAGTC AAACAACTAG TCCGAAAAAA AAACAAGACA AGCCAAGTAC AGTAATAACT ATAAACATAA CTACAGATCT CAACCAACCG AAACAATAAA AAAGACATAA ACAACGAGAA TCAAAAAACT AACAATAACC AACAACCGTC CGTAACAATC AGACTAACCA TCATAATCAT ATAAGATATA GAAAGCCTAA AATGACAAAA GCATACACAC ACAACACACA CACAACACAG ATGAATAGCC ATATTCACAC TCCACCTACC ACAATCATAC CATCACTACA CATCTATCAC // ID R25_0_0000181 standard; DNA; UNC; 831 BP. XX AC R25_0_0000181 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000181 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005b04.f1; XX FH Key Location/Qualifiers FH FT source 1..831 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000181_A FT misc_binding 120..153 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000181_1" FT /note="Base quality score is 3.0029e-04" FT misc_binding 153..186 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000181_2" FT /note="Base quality score is 2.3233e-04" FT misc_binding 186..219 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000181_3" FT /note="Base quality score is 1.0915e-04" FT misc_binding 219..252 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000181_4" FT /note="Base quality score is 9.6979e-04" FT misc_binding 252..285 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000181_5" FT /note="Base quality score is 1.0612e-03" FT misc_binding 285..318 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000181_6" FT /note="Base quality score is 4.5858e-05" FT misc_binding 318..351 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000181_7" FT /note="Base quality score is 6.0346e-05" FT misc_binding 351..384 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000181_8" FT /note="Base quality score is 1.1677e-04" FT misc_binding 384..417 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000181_9" FT /note="Base quality score is 5.7676e-05" FT misc_binding 417..450 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000181_10" FT /note="Base quality score is 1.0633e-04" FT misc_binding 450..483 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000181_11" FT /note="Base quality score is 2.5790e-03" FT misc_binding 483..516 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000181_12" FT /note="Base quality score is 9.5109e-03" FT misc_binding 516..549 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000181_13" FT /note="Base quality score is 1.0486e-02" FT misc_binding 549..582 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000181_14" FT /note="Base quality score is 6.2286e-02" XX SQ Sequence 831 BP; 261 A; 192 C; 199 G; 179 T; 0 other; GCGCAGTGAA TGTATACGAT CACTATAGGG CGAATTGGGC CCTCTAGATG CATGCTCGAG CGGCGCCAGT GTGATGGATA TCTGCAGAAT TCCAGCACAC TGGCGGCCGT TACTAGTGGA TCTAACTAGA CTTCATTTGA CTTTGCGAGT AGATCTAACA GCGCCACCCG TACCGACCGC ACTAGATCTA CACAGAATCC GCTCCACCAT AAAACTAGAT CTAGTAACGC AGGCGGGGGG GTAATTGGTA GATCTAATGT ACCCTTGCAG GATTGACGTA CTAGATCTAT CCTAAGGTCC CCGGCACGCC TACCTAGATC TAGGAACCGA TCATAGCGTG GGAAAGGTAG ATCTACGGGA TCTTTGAGGG GTGCATGGTA TAGATCTATT AAGTTTGGAC TGCGAGGGGT GGGTAGATCT ACGTGGGGTA GAAGGGAAGA ACTGCATAGA TCTAGTTCGT CCTTAGGACG TCGTAGCGAT AGATCTACGT TTTCCATCTG TACGGATCCA TATAGATCTA GCTTCCGGCG CGGTCCACCC TACCTTAGAT CTACTGACCA TCGTTTAGCT ATCCATCATA GATCCGAGCT CGGTACCAAG CTTGATGCAT AGCTTGAGTA TTCTATAGTG TCACCTAAAT TGCTTGGCGT AATCATGGTC TAGTGTCTGG GGTGTGTGAA ACCACACAGG GAGGCGAAAC ACAAACACAA CGACAAGAAA CACAACCCAC AAACACAGGA GAAGAAAACA ACAACACGCA AACACAAAAT AACACAACAA CAAAAACAAA CAACAAAGAC ACAAAAACAG ACAGAAAACA AGAAAAGGAG A // ID R25_0_0000182 standard; DNA; UNC; 866 BP. XX AC R25_0_0000182 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000182 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005b06.f1; XX FH Key Location/Qualifiers FH FT source 1..866 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000182_A XX SQ Sequence 866 BP; 407 A; 231 C; 100 G; 128 T; 0 other; GCGGTGAGCG CAGGATGTAT AGATTCACTA TAGGGCGAAT TGGGCCCTCT AGATGCATGC TCGAGCGGAC GCCAGTGTGA TGGATATCTG CAGAATTCCA GCACACTGGC GGCGTTACTA GTGGATCCGA GCTCGGTACC AAGCTTGATG CATAGCTTGA GTATTCTATA GTGTCACCTA AATAGCTTGG CGTAATCTTA GTCATAGCTG TTTCCTGTGT GAAAACGCCG CGAGGTATCC CCCAGATCAC GACCGCGAAG AACAACCCAG TCACGACCGC ACAATGATCC ACCCACAACA GACCCGACCG ACCCACAAAA CAAAAAACAA AAACAAGACC CAAAATAAAA TCAGAAAATA AAAAGACAAA AAACAAAAAA AAAAAAACAC ACACAGCAAA CAACTCAACA CACACAACAG AACAAAACAA CAAACAGTAC AAAACAACAA ACAAAAAAAA AAACACCAAA ACACCACACA GACTAGAGAA AACTAAAATA ATAGTAAAAC AAATAATGAA ACTAACAAAT CGAACAACTC AAGAATAAAC ACACATAATA TACAAACAAA TACAAATAAA CACTCTCAAA TAATCTACAA ACTCCATACA TATCACATAC AAATAAAAAC ACAAACACAA ACACACCAAC TATAATTAAA CAACACAAAG CTCCACCTAA CACGAGATAA AAATCACCAC ACAGCATCAC CCACCCCCTT ACACCACCTC TGCACTACAC ACATTCACAC AAAACACTAC ACAACAAAAC AACCCTTACA ACAAAAACAT ACAACACCAA GCACTACCAT AAAAATAAAA ATAAAAACAA AAATACATCA CTACACGAAC ATATAAAACC AACAAA // ID R25_0_0000183 standard; DNA; UNC; 821 BP. XX AC R25_0_0000183 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000183 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005b11.f1; XX FH Key Location/Qualifiers FH FT source 1..821 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000183_A FT misc_binding 122..155 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000183_1" FT /note="Base quality score is 2.3337e-02" FT misc_binding 155..188 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000183_2" FT /note="Base quality score is 4.2376e-04" FT misc_binding 188..221 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000183_3" FT /note="Base quality score is 7.5441e-04" FT misc_binding 221..254 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000183_4" FT /note="Base quality score is 9.4400e-04" FT misc_binding 254..287 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000183_5" FT /note="Base quality score is 2.5689e-03" FT misc_binding 287..320 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000183_6" FT /note="Base quality score is 4.1272e-02" FT misc_binding 320..353 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000183_7" FT /note="Base quality score is 5.0362e-02" FT misc_binding 353..387 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000183_8" FT /note="Base quality score is 7.6143e-02" FT misc_binding 387..420 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000183_9" FT /note="Base quality score is 2.5037e-02" XX SQ Sequence 821 BP; 255 A; 193 C; 198 G; 174 T; 1 other; CAGCAGTGAA TGTATACGAT TCACTATAGG GCGAATTGGG CCCTCCTAGA TGCATGCTCG AGCGGCGCCA GTGTGATGGA TATCTGCAGA ATTCCAGCAC ACTGGCGGCC GTTACTAGTG GATCTAGGGG TGTGGATGTG CAGGGTAGGG ATAGATCTAG GGTAACAACT CGTTGTACTG GCGTTAGATC TAAAATTGGA CCTCGGGAAC TCCTCGGTAG ATCTAGCGCG CACTAAAAGG CTCCCTAGTA TAGATCTATC TGTGGTTCGA CTTAGCTTCT TCTTAGATCT AGCCTGGACG GGCATAAGGG GAGTAGTAGA TCTAAGTGCG ACCACTCACA CAAATCCGAT AGATCTACGT GCGGATCAGT GAATCTTGGT GCTTAGATCT ACATACGCCG ATCAGGGTTC TTTACATAGA TCCGAGCTCG GTACCAAGCT TGATGCATAG CTTGAGTATT CTATAGTGTC ACCTAAATAG CTTGGCGTAA TCATGGTCAT AGCTGTTTCC TGTGGTGAAA CCGCCGCGAG GGGTCCACCA AGTCAAGACC GCGAGGGTTC CCCCAAGTAC AAGACAGAGA GAGTAACACC AAATGAACAG CAGAAAGTGA ACATAAACAG ACATAGGCAC AGCGACATAC AAGATAACGA CAAGATAACA AACACACCAG ACCAACAGCA TAGACACTAC AGAGCCACAC AAGACGATAG CACACGAGCA AATCAACGAT CAATCACCAC ACTCAATCAA GACGCGAGCA TAANTAATAC AAATCAAAGC GACTCGACCA CTGAGTATCA CGTACATAGA GACGTCATGC A // ID R25_0_0000184 standard; DNA; UNC; 982 BP. XX AC R25_0_0000184 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000184 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005c01.f1; XX FH Key Location/Qualifiers FH FT source 1..982 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000184_A FT misc_binding 124..157 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000184_1" FT /note="Base quality score is 2.4332e-02" FT misc_binding 157..190 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000184_2" FT /note="Base quality score is 1.5132e-02" FT misc_binding 190..223 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000184_3" FT /note="Base quality score is 1.4437e-02" FT misc_binding 223..256 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000184_4" FT /note="Base quality score is 7.3103e-03" XX SQ Sequence 982 BP; 414 A; 228 C; 143 G; 196 T; 1 other; CAAATCGCAG AATGTATACG TATCACTATA GGGCGAATAG GGCCTCTAGN ATACATGCTC AGCGGCCGCC AGTGTGATGG ATATCTGCAG AATTCCAGCA CACTGGCGGC CGTTACTAGA TGGATCTACC AGGGGGGGGC GTTGGTGTTA TCATAGATCT ACCACGATTA TCCGAACGGT TGGACATAGA TCTACACAAC AAACAAGCAG CACAACCAAT AGATCTAATG GTATCGTGGG TGTGTGTGGG TTTAGATCCG AGCTCGGTAC CAAGCTTGAT GCATAGCTTG AGTATTCTAT AGTGTCACCT AAATAGCTTG GCGTAATCAT AGTCATAGCT GTTTCCTGTG TGAAAGTGCC GAGAGTGATC CCAGAGAACA AGAGCGAGAG TGATTCAACA CAAATAACAA ACGAAAAGAA ACACCACAAT AACAAGACAG AGACGTCGAC AATAACAACA CACCCTCATC TAAACGATCC ACAACTAAAA AAATCACAAC ATCTACAAAA TAACATCACA CGAACATAAC ACCAACAACA TAATAACTAA ATATAATAAA TTACACAAGA TATCACACAG TTATTACACA TCAAACCAGA CACACATCAC ACAATACTAC TCACATAATA TATCTACAAT AACAAAATAA TACTAAGGCA TAGTACATAC TATCACATAT ACACGATATC GATAACGAAC CATACAAAAT AACAACCAAG TCAGACATAC AGGACCAATA TACTACAGCA TCACACAATG CACGATCCGA CAACTCGAAT GATCAACACT AATAATATCT TCCAGAACAT ACCAAACTAA AAATACACAA AATAAACACA TACAAAATAG ACAAAATAAC GAACGCACCA CGATCAACCA CACAATCAAC CAAACATAAT TAATAAACTA AACAAAGAAA ACAATAACTC TACATACATA AAATACTTAC ATAATACTAA CAAAACGAGA AGACACACGC TA // ID R25_0_0000185 standard; DNA; UNC; 841 BP. XX AC R25_0_0000185 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000185 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005c02.f1; XX FH Key Location/Qualifiers FH FT source 1..841 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000185_A FT misc_binding 119..152 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000185_1" FT /note="Base quality score is 1.4364e-03" FT misc_binding 152..185 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000185_2" FT /note="Base quality score is 5.4593e-03" FT misc_binding 185..218 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000185_3" FT /note="Base quality score is 1.4749e-04" FT misc_binding 218..251 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000185_4" FT /note="Base quality score is 2.6612e-05" FT misc_binding 251..284 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000185_5" FT /note="Base quality score is 8.7802e-05" FT misc_binding 284..317 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000185_6" FT /note="Base quality score is 3.6886e-05" FT misc_binding 317..350 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000185_7" FT /note="Base quality score is 1.3394e-04" FT misc_binding 350..383 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000185_8" FT /note="Base quality score is 1.6038e-03" FT misc_binding 383..416 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000185_9" FT /note="Base quality score is 5.5030e-03" FT misc_binding 416..449 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000185_10" FT /note="Base quality score is 1.1537e-02" FT misc_binding 449..482 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000185_11" FT /note="Base quality score is 1.4461e-02" FT misc_binding 482..515 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000185_12" FT /note="Base quality score is 7.6973e-02" XX SQ Sequence 841 BP; 259 A; 200 C; 158 G; 222 T; 2 other; ACGCAGTGAA TTGTATAGAG TCACTATAGG GCGAATTGGG CCTCTAGATG CATGCTCGAG CGGCGCCAGT GTGATGGATA TCTGCAGAAT TCCAGCACAC TGGCGGCGTT ACTAGTGGAT CTAGGAATGT TCTATGTGGG CAATAAAATA GATCTAAATT TTTGGCAACC TGCTTATTCT GTAGATCTAG TCCCGATTCC CTAACCTAGA GCGGTAGATC TATAGCGACT CCATTCTTCC CCCATTCTAG ATCTAACTAA CGCGATAGGC GGCATCCCCC TAGATCTATT GGGTACCCGC CTCAACCCGT TCGTAGATCT ACAGCAAGTA GGGTTCGCTT CAAGGGTAGA TCTAGCGTCT GAACTCCAAA ACTTACCTTT AGATCTATTT CACTCGAGGC TGAAAAAACA CTTAGATCTA ACAACAAACA AGTATTGATG GCCCGTAGAT CTATGTGTGG AGGCGGCCTT TGCGTGGTTA GATCTATATC GAACAACAAT CGCTACTGAA GTAGATAATC CGAGCTCGGT ACCAAGCTTG ATGCATAGCT TGAGTATTCT ATAGTGTCCA CTAAATTTGC TTGGAGTAAT CCTTGGGCAT AAGTTTTTCT GTGTGGGAAC ACCGCGGCAG TGTAAACCAT TCCGCCGGCA GCATACCCAA CACACAGTAG ATCACTACAC AATCATACAT ACAACACAAA CAATATACTA AAATAACATA TAACTATACA AACAATACAT AAGTAGTCCT CATATGACAC AACAACACCA TACAACATAA ATACACATCT ATTCTTTTCC TTTCTCACAA TTACTTTNTN ACAGAAACAA CACCACAAGC A // ID R25_0_0000186 standard; DNA; UNC; 836 BP. XX AC R25_0_0000186 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000186 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005c03.f1; XX FH Key Location/Qualifiers FH FT source 1..836 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000186_A XX SQ Sequence 836 BP; 370 A; 202 C; 107 G; 157 T; 0 other; CGGCGCGGAA CCACAGTGAT TGTATACGAT TCACTATAGG GCGAATTGGG CCCTCTAGAT GCATGCTCGA GCGGCGCCAG TGTGATGGAT ATCTGCAGAA TTCCAGCACA CTGGCGGCCG TTACTAGTGG ATCCGAGCTC GGTACCAAGC TTGATGCATA GCTTGAGTAT TCTATAGTGT CACCTAAATA GCTTGGCGTA ATCATGGTCA TAGCTGTTTC CTGTGTGAAA GCGCCGCGAG GGTCCCCCCA GATCACGACC GCGCAGGTAT CCCCACAGAT CAAGACGGAC AGACTACACC CCAGATAGAG AGCAGACAAG CCTCACCAAA ACACAGAAAG ACCCATCAAC AACCCGCCGC AAACACACCC ACTACCAAAA CAAACAACCA GCACAACAAA AACAGAACTA ATCAAAAAAA TAAAACCAAA ATAGCAAATA AACCCACACA CTAATAACCA TAACACCAAA ATCAAGTTAT CCAAATCTTA AAACTACCCA CATCCAACAC ACACTAAATA AATTTAATTG ATCTGAAAAC AACCAATACC ATATTTCACC ATACTAAAAA CTATCAATAA TAATTAACAC AAAAAAACAA CCAATAAGCA AATAAATACC ATCAAAATAT AGACGAAAAT GCAATAAAAT CACAAATATA ATATAGAAAA AACAAAACAA AAATAAAAAA AAAAATAAAT AATTTAAATA GCAACAAATA CAACACACAA TCTTCAACAA TAGCATAATC ACTAACATAA ATAATATCAA CTAAATATAT AATAATTATC AACATTCATA ATAAATACAG AAACAAGACA AAGCAATACA CACATC // ID R25_0_0000187 standard; DNA; UNC; 832 BP. XX AC R25_0_0000187 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000187 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005c04.f1; XX FH Key Location/Qualifiers FH FT source 1..832 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000187_A XX SQ Sequence 832 BP; 345 A; 171 C; 99 G; 217 T; 0 other; GGGAAATGAG GCATGCATAG ATTCACTATA GGGCGAATTG GGCCCTCTAG ACTCATGCTC GAGCGGCGCC AGTATGATGG ATATCTGCAG AATTCCAGCA CACTGGCGGC CGTTACTAGT GGATCCGAGC TCGGTACCAA GCTTGATGCA TAGCTTGAGT ATTCTATAGT GTCACCTAAA TAGCTTGGCG TAATCATAGT CATAGCTGTT TCCTGTGTAA AACTCCCGCC AGGGATCACC CAGATACGAC CGCGAGGGTT CACGCAGATC AAAGACCGTA AAAGCTCACA CATCATCAGA AAGTTATGGA CTCAACAGTT TCCGGCACAG TTGGCCCCTC TTAATTAATG TCTTTGAAGT CTACTAACTT CCTTATCTTG GAACTAATTC TTCTTTATTT CTAACAAAAA ATCAATAATC AATAAACTAA AATTACATAC ATTATAATAC AAACATATAA AAATACTATA ATTAAATTAA AATACTAAAA AAATAAAATC TATCAAATAT TAAACACAAT AATCAAATAA AAAATTAATA TTATTAAAAC ACAAAATACA AGATATAACT CCAAATAAAA TCCTCACACA AAAAATATTA CAAATACAAA AACAATAACA CATCCATATA TATACCAAAC GACATAACAA TAATATAAAA TAAATAAATA ACAAATATAA ATACTACATC TACATAACAA TATATTCGAT CTCACACACT CAATCAAAGA CATAGTAACA AAACTAAAAA CCATAATCAT CTAGTACTAA CAACAATATA TGACTTATAT AAGAACATCC TACTACAATG CATGCTATCA ACATCTTTAC AT // ID R25_0_0000188 standard; DNA; UNC; 665 BP. XX AC R25_0_0000188 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000188 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005c09.f1; XX FH Key Location/Qualifiers FH FT source 1..665 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000188_A FT misc_binding 124..157 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000188_1" FT /note="Base quality score is 9.1695e-04" FT misc_binding 157..190 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000188_2" FT /note="Base quality score is 1.5055e-04" FT misc_binding 190..223 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000188_3" FT /note="Base quality score is 1.0111e-03" FT misc_binding 223..256 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000188_4" FT /note="Base quality score is 8.7785e-04" FT misc_binding 256..289 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000188_5" FT /note="Base quality score is 1.3554e-01" XX SQ Sequence 665 BP; 198 A; 160 C; 164 G; 141 T; 2 other; CATACAGCAG GAATGACTAC GAGTCACTAT AGGGCGAATA GGGCCCTCTA GATGCATGCT CGAGCGGCGC CAGTGTGATG GATATCTGCA GAATTCCAGC ACACTGGCGG CCGTTACTAG TGGATCTAGA GTCGCAGTGT AAATACTTCC AATTAGATCT AAAGAGCGGT ACTGGTGGCG CACGTCTAGA TCTAGTCAGA TCAGTTAAGT GGCCGAGTTT AGATCTAGAA ATAGCAGATT GAACGATGAG TGTAGATCTA TTGCGGTACA TCCGCTCCAG AGAACCCCCC NTTAAGGGGA AAAATTCCNT TACCTTGAGA CCCGGAAAAA ACTGGAATTG GCCCCCAACA AACCGTAAAA CCAAAAGGGC CCCCAAAAGT TGTCTTAGCA AAATTTCCAG TTTTAACGCC GGGGGTATTA AAAGCCCCTA AATAAGGTTT TCCCCTGTTA AAACCAAGGG CTCCCAAAAA TGCCAAGCAA GGCGCCGAGT AACCAAGCAC AACGCTTTCA CACGGGAAAA TTTTTCCGTT TTAAATCATC CCCAACCCAG ATTTTGTAGT CGGATTACCC GGGGGAGAAA AAAAACGCCG GGGGAGGAGG GGGCCCGCGA AAACGGGGGG ACCCATGATT GAATTTCACA CGCACTCGTA CCCCGGGATT TTTGC // ID R25_0_0000189 standard; DNA; UNC; 716 BP. XX AC R25_0_0000189 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000189 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005c10.f1; XX FH Key Location/Qualifiers FH FT source 1..716 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000189_A FT misc_binding 115..147 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000189_1" FT /note="Base quality score is 9.0450e-04" FT misc_binding 147..180 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000189_2" FT /note="Base quality score is 1.5121e-04" FT misc_binding 180..213 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000189_3" FT /note="Base quality score is 2.4990e-03" FT misc_binding 213..246 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000189_4" FT /note="Base quality score is 4.8012e-04" FT misc_binding 246..279 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000189_5" FT /note="Base quality score is 4.2923e-04" FT misc_binding 279..312 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000189_6" FT /note="Base quality score is 1.4052e-04" FT misc_binding 312..345 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000189_7" FT /note="Base quality score is 4.8723e-03" FT misc_binding 345..378 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000189_8" FT /note="Base quality score is 1.6865e-03" FT misc_binding 378..411 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000189_9" FT /note="Base quality score is 1.1631e-02" XX SQ Sequence 716 BP; 211 A; 191 C; 171 G; 140 T; 3 other; GGCAGATGTA TACGACCACT ATAGGGCGAA TGGGCCCTCT AGATGCATGC TCGAGCGGCC GCCAGTGTGA TGGATATCTG CAGAATTCCA GCACACTGGC GGCGTTACTA GTGGATCTAG GAGGGGTCAA GTAGTTAAAG GGATAGATCT AATCTGCACC TGAGGATTTG GGGTTTTAGA TCTACTGCTG TCGCAGTGGC TACTCCTAGT AGATCTACAC TGAAATGCCC CGTTCCGCGA TTTAGATCTA GTCGCCAGAC GCTGACTGAA CCTTCTAGAT CTAGTTTAGG TGAGGGGGGA GCAGCAGATA GATCTACAGC GGCCGGCCCC GAAGGTCTCC CTAGATCTAG ATCAGCACTG GTCTGAGCGA TACTTAGATC TACAGCCGAC CAACTATCCA ATTCTATTAG ATCCGAGCTC GGTACCAAGC TTGATGCATA GCTTGAGTAT TCTATAGTGT CACCTAAATA GCTTGGCGTA ATCATGGTCA TAGCTGTTTT CGTGTGAAAN NNAACCACAA ACCACCCACA CACAACACAA ACAAACCAGG TCAAGACCAA CGGCAGGAGC CGCCCACTAA AGATCAGGGG CAGAGAACAA AGAGAGGCCC GCCAACAGTA CAAACAACGA GCCCAACCAC GAGCAGCACA CGCACGAGAC ACAACGCGAC CGCAAACAAC AAGAGCAACA CTAGCCCCAC CACCCATCAA TCCAAT // ID R25_0_0000190 standard; DNA; UNC; 415 BP. XX AC R25_0_0000190 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000190 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005d01.f1; XX FH Key Location/Qualifiers FH FT source 1..415 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000190_A FT misc_binding 124..157 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000190_1" FT /note="Base quality score is 1.6948e-03" FT misc_binding 157..190 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000190_2" FT /note="Base quality score is 2.5915e-03" FT misc_binding 190..223 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000190_3" FT /note="Base quality score is 2.8461e-02" FT misc_binding 223..256 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000190_4" FT /note="Base quality score is 4.1762e-02" FT misc_binding 256..289 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000190_5" FT /note="Base quality score is 3.4084e-02" FT misc_binding 289..322 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000190_6" FT /note="Base quality score is 1.0303e-02" XX SQ Sequence 415 BP; 111 A; 84 C; 116 G; 104 T; 0 other; TGAAATCCGC AGTGAATGTA TAGATTCACT ATAGGGCGAA TTGGGCCCTC TAGATGCTGC TCGAGCGGCG CAGTGTGATG GATATCTGCA GAATTCCAGC ACACTGGCGG CCGTTACTAG TGGATCTACA CCAGCTAACG CATACGTATA CTATAGATCT ACTAAAACAC GGAAAGTACT TCGCTCTAGA TCTAGTAGGG AAGGGGAATC GGACGGTGGT AGATCTATAA GGCGTCGGTA TGGACAGAGT GGTAGATCTA ATAAGCGCGG ACGGGTATAC GCCGCTAGAT CTACGGAGTA TGCTGGACAG GAGGACAGTA GATCCGAGCT CGGTACCAAG CTTGATGCAT AGCTTGAGTA TTCTATAGTG TCACCTAAAT TGCTTGGCGT AATCATGGTC ATAGCTGTTT CCTGT // ID R25_0_0000191 standard; DNA; UNC; 706 BP. XX AC R25_0_0000191 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000191 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005d03.f1; XX FH Key Location/Qualifiers FH FT source 1..706 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000191_A FT misc_binding 165..198 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000191_1" FT /note="Base quality score is 3.3887e-03" FT misc_binding 198..231 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000191_2" FT /note="Base quality score is 9.6364e-04" FT misc_binding 231..264 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000191_3" FT /note="Base quality score is 3.0102e-04" FT misc_binding 264..297 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000191_4" FT /note="Base quality score is 6.8892e-05" XX SQ Sequence 706 BP; 289 A; 117 C; 173 G; 122 T; 5 other; GGAGNNNNNG GCAGATCCGA CGTTGTTTAA AAGGCAGTGA ATTGTATACG ATTCACTATA GGGCGAATTG GGCCTCTAGA TGCATGCTCG AGCGGCGCCA GTGTGATGGA TATCTGCAGA ATTCCAGCAC ACTGGCGGCC GTTACTAGTC TTCTGTATGT CGAGATCTAC AATGGGGGTT ATGCCTTACT TATATAGATC TACTTATGAA TTAGGTGTCC ACGTGGATAG ATCTATGATA AATACAATCA AGAATGGGCG TAGATCTAGT ACTCGTTGTA ATCTCAATTA AGATAGATCC GAGCTCGGTA CCAAGCTTGA TGCATAGCTT GAGTATTCTA TAGTGTCACC TAAATAGCTT GGCGTAATCA TGGTCATAGC TGTTTTCCGT GGTGAAAAGG AAGAGGAGAG ATCCCAGCAG ACAAGAAGGG ACACAAAACA TGACACGGAG GACAAGATCG AGAAACGAAA AGAGAACAAA ACAGCACGAA CAGAGCAGAA AGAAGCAGAA AAAAAGACAG AACACAGGAC AAACAGAAGC AGAACTAGCA GAAAGCACAG AGGAAAAAGC AAAAAAGAGA AAAACCACAA AGAGTGGAAA AAAACAGAAA AAGAAAGAAA GGAAGAGAAA GAAGAAAACA AGCAGAAGGC AAAGACCAGA AAAAGAAATA AAAGCACACA ACGAAAAAGA GAGAAAAAGA AAACAA // ID R25_0_0000192 standard; DNA; UNC; 819 BP. XX AC R25_0_0000192 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000192 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005d04.f1; XX FH Key Location/Qualifiers FH FT source 1..819 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000192_A FT misc_binding 127..160 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000192_1" FT /note="Base quality score is 1.0902e-02" FT misc_binding 160..193 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000192_2" FT /note="Base quality score is 5.7421e-05" FT misc_binding 193..226 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000192_3" FT /note="Base quality score is 2.0848e-04" FT misc_binding 226..259 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000192_4" FT /note="Base quality score is 1.4501e-03" FT misc_binding 259..292 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000192_5" FT /note="Base quality score is 2.4578e-03" FT misc_binding 292..325 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000192_6" FT /note="Base quality score is 5.4568e-03" FT misc_binding 325..358 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000192_7" FT /note="Base quality score is 2.8248e-02" FT misc_binding 358..391 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000192_8" FT /note="Base quality score is 3.1132e-02" XX SQ Sequence 819 BP; 287 A; 205 C; 175 G; 152 T; 0 other; CGTAAAACGC AGGAATGTAT ACGAGTCACT ATAGGGCGAA TTGGGCCCTC TAGATGCATG CTCGAGCGGC GCCAGTGTGA TGGATATCTA GCAGAATTCC AGCACACTGG CGGCCGTTAC TAGTGGATCT AATCCTAGAA TCGGTTAATG AGCTATTAGA TCTACGATCC CTCACTTCTC CTGGTCCATT AGATCTATCG TGCCTACCTA CCACCCGTTT TCTAGATCTA TGATCCATCC CGCACTTAGT GAGCGTAGAT CTACGCGATG CAACCAACTC CCGGAGTTTA GATCTAAGGA CTCGATTCCA AAATGGCAGG TTAGATCTAT TAGGGGGTCA GGGATGAGAG GACATAGATC TACCCTTCCA GTAGCGATCG AGGTGAGTAG ATCCGAGCTC GGTACCAAGC TTGATGCATA GCTTGAGTAT TCTATAGTGT CCCCTAAATG GCTTGGCGTT ATCATGGTCA TAGCTGTTGC CGTTGTGCAT GGTCCTAGCT GTTTCCGTGG TGAACACCAA CAACAAAAGG ACAAAACACA ACACATCACA CACCAATGAA CAACAAAACA ACACCTACAC AAGCACGACA AAAACCACTA CAAACAAGGT AAGAATACCA AGACCAAACA CACTACGGAC AGGAACATAA AAACACCCAC ACTATAGAAC GACACACCAC GAGAACGCGA GAGAGACGGG AATAGCAAGA GACAACAGCG AAAGCAAAAA CACAAGAGCA GACAAAAGAC AACGAGAAAC CTAACAAGAA CAAACAAACA ACCCGCGAGA CAGCGACAAA GACCACAGAA AGAAACAAA // ID R25_0_0000193 standard; DNA; UNC; 821 BP. XX AC R25_0_0000193 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000193 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005d05.f1; XX FH Key Location/Qualifiers FH FT source 1..821 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000193_A FT misc_binding 119..152 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000193_1" FT /note="Base quality score is 1.3540e-03" FT misc_binding 152..185 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000193_2" FT /note="Base quality score is 2.6762e-04" FT misc_binding 185..218 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000193_3" FT /note="Base quality score is 7.0118e-04" FT misc_binding 218..251 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000193_4" FT /note="Base quality score is 1.5903e-04" FT misc_binding 251..284 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000193_5" FT /note="Base quality score is 1.9306e-04" FT misc_binding 284..317 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000193_6" FT /note="Base quality score is 4.6457e-04" FT misc_binding 317..350 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000193_7" FT /note="Base quality score is 2.0605e-04" XX SQ Sequence 821 BP; 302 A; 190 C; 180 G; 149 T; 0 other; TAAAAGCAGG ATGTATCGAT CCACTATAGG GCGAATTGGG CCTCTAGATG CATGCTCGAG CGGCGCCAGT GTGATGGATA TCTGCAGAAT TCCAGCACAC TGGCGGCGTT ACTAGTGGAT CTAGAAAGTG TTCCCTTGTG TCTGACATTA GATCTATAGC GCTGTCGAGA AGCTGTTATT TTAGATCTAG CTTTAGTGAT AACGGCCAGT CCGGTAGATC TAGGTGTCGT AGGACACAGG TTTTTTTTAG ATCTAACACA ACTCCATACT AGTAGCACCC TAGATCTACC TGATGGTGCC CCACTCTAAC CGTTAGATCT AGAGTAGCTA CTATAATATG TGAGGTTAGA TCCGAGCTCG GTACCAAGCT TGATGCATAG CTTGAGTATT CTATAGTGTC ACCTAAATAG CTTGGCGTAA TCATGGTCAT AGCTGTTTCC TGTGGGTGAA AGCGCCGCGA GGAAACAGCA AGACACGACA GAGAGGAACA CCACACAAGA CACAAGAACG CAACAGATAA CACACAACAA GAACACACCA CGAACCAGCC ACCACAGAAG CTAGAGAACA ACAACAGCCG AAACAGCGAA AAGAAGCCAA GAAAAACGGA AGAAAAATAA AAAAACAAAC AAATAAAGAA TCACCAGCAC ACCACACACA AGCGACGCGG AACACAAAGA AATAGAAGAC TCAACGCAAC GAAAGAAGCA GAATAATCAA CGTATCTCAA CAGATAACAA CACAAGAACG ATAGGCGGAC AGTAATCCAA AACCACATAC AAGACAGAGC AGACCAAGGC AGACACCAGA ACAGGAACAG C // ID R25_0_0000194 standard; DNA; UNC; 758 BP. XX AC R25_0_0000194 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000194 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005d07.f1; XX FH Key Location/Qualifiers FH FT source 1..758 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000194_A XX SQ Sequence 758 BP; 245 A; 217 C; 140 G; 156 T; 0 other; AAGTGAATTG TATACGACTC ACTATAGGGC GAATTGGGCC CTCTAGACTC ATGCCGAGCG GCGCCAGTGT GATGGATATC TGCAGAATTC CAGCACACTG GCGGCGTTAC TAGTGGATCC GAGCTCGGTA CCAAGCTTGA TGCATAGCTT GAGTATTCTA TAGTGTCACC TAAATAGCTT GGCGTAATCA TGGTCATAGC TGTTTCCTGT GTGAAATCCC CGCCCGGGTC TCGCGAGCCA CGGCCGAGAT GTAGATCGGC GCACAAATCA ACAGATTGAT ACATCTACCG ATACGCGACA TGACGCGCAA TACTAGATCT CATCGGAGGT CGAGCGTAGA ATCCCTGTAG ATCTACTCCC TCGCCCGGCT AAAAACCAAA CCTAGATCTA TTGTGCCAAT GAATCGGATC CCAGAACTAG ATCTAGCTGT AGGACCCACG AGCTAACCGC AGTCATCTAC GACGCCGTAA TAGTGATGGC TGGCAAATAC CGAGCTACGG AACCAAAGCT TGATGCCATA GATTGAGTAA TTCTATCGTG TCACCTAAAT AGACTTGGCG TACTCTGCTC CTAAGCTTTA CCAGTGTAAA CACCCTAACA CTCCCAATCA CAACAATCAA ATACTCACAA CAAAACACAA AACACAACCC ACACTCCAAA CAAACACATC TCAATAAAAC CCCAACAAAA CAAAACAACA CACAACAACA CACCCCACAT TAATACTACC ACACAACCTC CACAATCCCA CAACAAAA // ID R25_0_0000195 standard; DNA; UNC; 321 BP. XX AC R25_0_0000195 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000195 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005d11.f1; XX FH Key Location/Qualifiers FH FT source 1..321 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000195_A XX SQ Sequence 321 BP; 79 A; 90 C; 74 G; 78 T; 0 other; CAGGATGATA CGATTCACTA TAGGGCGACT TGCGGGGGGC CCTTCTAGAT GCATGCTCGA GCGGCGCCAG TGTGATGGAT ATCTGCAGAA TTCCACGCAC ACTGGCGGCG TTACTAGTGG GATTCTAGGT TGTATGACTG GGCTAGATTA CATTGTGGGG CAACATTGTG CTTATAGATC TACCGGCGAG GGTGTAAATC CTTAGATCTA CTGGAACGAC GACCTTCTCT AGCGGCTTTT TAACCCCCCC CCCCCCCACA ACCCGCTTTT TTTCCCCCCC GCTTTTTAAA AAACAACACA AAAAAAAAAC ACCCCCCCAA G // ID R25_0_0000196 standard; DNA; UNC; 793 BP. XX AC R25_0_0000196 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000196 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005e03.f1; XX FH Key Location/Qualifiers FH FT source 1..793 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000196_A FT misc_binding 123..156 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000196_1" FT /note="Base quality score is 1.4691e-04" FT misc_binding 156..189 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000196_2" FT /note="Base quality score is 5.5840e-05" FT misc_binding 189..222 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000196_3" FT /note="Base quality score is 1.5112e-03" FT misc_binding 222..255 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000196_4" FT /note="Base quality score is 2.8227e-04" FT misc_binding 255..288 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000196_5" FT /note="Base quality score is 1.9635e-04" FT misc_binding 288..321 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000196_6" FT /note="Base quality score is 1.0267e-02" FT misc_binding 321..354 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000196_7" FT /note="Base quality score is 2.7018e-04" XX SQ Sequence 793 BP; 281 A; 215 C; 155 G; 142 T; 0 other; ATAAAAGCAG TGATGTATAC GAGTCACTAT AGGGCGAATT GGGCCCTCTA GATGCATGCT CGAGCGGCGC CAGTGTGATG GATATCTGCA GAATTCCAGC ACACTGGCGG CGTTACTAGT GGATCTACTA AAATAGGGGC TTGGGTACTG CTTAGATCTA TAAATCCCCG AACGCCGCAC TTCCATAGAT CTAAGTGGAC CCCCCTACGC ACGCGACCTA GATCTATTCA ACCTGGAGGT TACCTGTTCG GTAGATCTAC CACAGTGGAA GGTCCTTATT GGTCTAGATC TATCACTTTA ACTCACAAAC AAAGTCTTAG ATCTAGATAA ATACCTTCGA CGGCCTGACA TAGATCCGAG CTCGGTACCA AGCTTGATGC ATAGCTTGAG TATTCTATAG TGTCACCTAA ATAGCTTGGC GTAATCATGG TCATAGCTGT TTCCTGTGGT GACCCCGAAG ACCGATACCA CCAGCGACAA CACCGAGGGG CTGCACCCAT TACAGGGTAG AGCCAGTACG TCGACCAACA CGAGTGAGCA AACCTCACCT CTAATTCGCC GTTGCAGCAC ACAACGACAG ACAACCAACC ACGAGAAACC CGATCGAGAA CGGACACAAA CCATAACGAT GAGCACACCA CACAAAACCG CAAACTCACA GACGAAAGAA AAAGACAAAA ACAAATAAAC AATCAGAACA CAGCAACACA AACACACAAA ACAACAACAC GCAAAACAAC ACACAAAACC AGAGCAACAA CAACACAAAC AACAAAACAC CAAAGAAAAC ACA // ID R25_0_0000197 standard; DNA; UNC; 623 BP. XX AC R25_0_0000197 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000197 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005e06.f1; XX FH Key Location/Qualifiers FH FT source 1..623 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000197_A FT misc_binding 128..161 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000197_1" FT /note="Base quality score is 7.8259e-04" FT misc_binding 161..194 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000197_2" FT /note="Base quality score is 9.5119e-05" FT misc_binding 194..227 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000197_3" FT /note="Base quality score is 1.0478e-04" FT misc_binding 227..260 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000197_4" FT /note="Base quality score is 6.4696e-05" FT misc_binding 260..293 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000197_5" FT /note="Base quality score is 3.1435e-04" FT misc_binding 293..326 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000197_6" FT /note="Base quality score is 6.4804e-03" FT misc_binding 326..359 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000197_7" FT /note="Base quality score is 2.8745e-04" FT misc_binding 359..392 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000197_8" FT /note="Base quality score is 9.4866e-03" FT misc_binding 392..425 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000197_9" FT /note="Base quality score is 5.7982e-04" XX SQ Sequence 623 BP; 222 A; 133 C; 121 G; 146 T; 1 other; GTTGCTAAAG CAGTGATTGT ATACGACTCA CTATAGGGCG AATTGGGCCC TCTAGATGCA TGCTCGAGCG GCGCCAGTGT GATGGATATC TGCAGAATTC CAGCACACTG GCGGCCGTTA CTAGTGGATC TAAAGAATGA ATAACAACAC TGAGACCTAG ATCTATGAAA ATAGGAGACG TTAAACTCGC TAGATCTAGC GGGATGTGTA TCTTCTTGGG CAGTAGATCT AGATTTAGCC GTGCCGTATG GGTATATAGA TCTATTCGTT CTGCCGTGGG ACCAGGTTTT AGATCTACCC TAATCCTAGA CCGTAAAATG ACTAGATCTA ACCTTGCCTA TGACTTCGCG CGACGTAGAT CTAAAATAAA TCAGCCCCAC CTCTAGATTA GATCTAACCT CCCTCGCAAC AGTTGCTGCT CTAGATCCGA GCTCGGTACC AAGCTTGATG CATAGCTTGA GTATTCTATA GTGTCACCTA AATAGCTTGG CGTAATCATG GTCATAGCTG TTTCCTGTGT TGACANAAAA ACACAAAAAA AACAAAAAAA CCACAAACAA AACACAAAAA AACAACAAAA AAAAAAACAC AACAAAAAAC AAAAAAAAAA AAAAAAAAAA AAA // ID R25_0_0000198 standard; DNA; UNC; 761 BP. XX AC R25_0_0000198 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000198 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005e09.f1; XX FH Key Location/Qualifiers FH FT source 1..761 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000198_A FT misc_binding 113..146 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000198_1" FT /note="Base quality score is 1.7794e-03" FT misc_binding 146..179 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000198_2" FT /note="Base quality score is 6.1340e-03" FT misc_binding 179..212 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000198_3" FT /note="Base quality score is 1.4093e-03" FT misc_binding 212..245 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000198_4" FT /note="Base quality score is 7.6145e-04" FT misc_binding 245..278 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000198_5" FT /note="Base quality score is 1.0999e-03" FT misc_binding 278..311 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000198_6" FT /note="Base quality score is 2.8302e-03" FT misc_binding 311..344 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000198_7" FT /note="Base quality score is 3.1566e-03" FT misc_binding 344..377 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000198_8" FT /note="Base quality score is 1.4359e-02" FT misc_binding 377..410 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000198_9" FT /note="Base quality score is 5.8591e-03" FT misc_binding 410..443 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000198_10" FT /note="Base quality score is 4.2432e-03" XX SQ Sequence 761 BP; 261 A; 181 C; 136 G; 183 T; 0 other; TGTATACGAT TCACTATAGG GCGAATTGGG CCCTCTAGAT GCATGCTCGA GCGGCCGCCA GTGTGATGGA TATCTCGCAG AATTCCAGCA CACTGGCGGC CGTTACTAGT GGATCTAGTC CCATCACCCG CACTGCGAGC CATAGATCTA CCATCAAATT GGACTAGAGA CCTCGTAGAT CTAGGTAGAC TGGGTAGGTT CTCTAGGGTA GATCTATGAG CGTATTTATA GGATGTTACG GTAGATCTAG AACAGTGGAC TAAGATTCCG CCAATAGATC TACGTCAGAC GGAATTAAGG CTGAAATTAG ATCTAAATAG CCCCGTTCCC CCAATGTCGC TAGATCTACA GAGAGTTCCC AGACAACGCG TCATAGATCT ACGCCCTTGA GGAATTGATG TCAAAATAGA TCTATCCCTT TCAGCGGCAG TCTCACATTT AGATCCGAGC TCGGTACCAA GCTTGATGCA TAGCTTGAGT ATTCTATAGT GTCACCTAAA TTGCTTGGCG TAATCATGGT CATAGCTGTT CCTGTGTGAA AACCGCGACA GTGTCACCCA AGATACGACC GACAAATTAC ACCACAACAA AGATATATAA TCTCAACATA CAAAAAAAAA CTAACCACAC ACACCATACA TACCTAATAT ACAAAAAATA TATAATACAC AATATATAAA CACTATACAT ACAAAACATA TACATATACA CTTCCATACA AATAAATACA AACCACAAAA CATACACTAA AAACAAATAC C // ID R25_0_0000199 standard; DNA; UNC; 774 BP. XX AC R25_0_0000199 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000199 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005f02.f1; XX FH Key Location/Qualifiers FH FT source 1..774 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000199_A FT misc_binding 124..157 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000199_1" FT /note="Base quality score is 4.2728e-04" FT misc_binding 157..190 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000199_2" FT /note="Base quality score is 8.3156e-04" FT misc_binding 190..223 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000199_3" FT /note="Base quality score is 2.3396e-03" FT misc_binding 223..256 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000199_4" FT /note="Base quality score is 1.5967e-04" FT misc_binding 256..289 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000199_5" FT /note="Base quality score is 6.9171e-04" FT misc_binding 289..322 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000199_6" FT /note="Base quality score is 2.3091e-03" FT misc_binding 322..355 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000199_7" FT /note="Base quality score is 1.2652e-02" FT misc_binding 355..388 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000199_8" FT /note="Base quality score is 7.7335e-04" FT misc_binding 388..421 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000199_9" FT /note="Base quality score is 8.8101e-04" XX SQ Sequence 774 BP; 261 A; 151 C; 165 G; 197 T; 0 other; AAGGGCAGTG ATTGTATACG ACTCACTATA GGGCGAATTG GGCCCTCTAG AATGCATGCT CGAGCGGCCG CCAGTGTGAT GGATATCTGC AGAATTCCAG CACACTGGCG GCGTTACTAG TGGATCTAAT ATAGACTAAA ATAAAAACAG CCCTAGATCT AGCGGATAAG CACTCACAAC AAACAATAGA TCTAGCAGTT GCAGCAGTGG ATACCAACGT AGATCTACTT CTTTTTATTT GGTAACTTTG GTTAGATCTA TCCGTTTTCG GGCTTCAGGT GTCCGTAGAT CTAGTAGGAT GAAGGAAGAT GTATGAAGTA GATCTAAGCC GATTCCTAGC AGCAGTTCCT CTAGATCTAC GCGGAGTTTC CCACGCTGCT TTTGTAGATC TAACATCAAG CAGCACCATG TTTTCGCTAG ATCCGAGCTC GGTACCAAGC TTGATGCATA GCTTGAGTAT TCTATAGTGT CACCTAAATA GCTTGGCGTA ATCCTGGTCA TAGCTTTTTC CTGGTGGTGA AAGCGCCACG GGGACAACAA ACAAAAAAAA AACACAAGAA CAAACACAAA AAGAGAGAGG AAGAAATCCG AATAACACAA AGTAAATAGT AGTAGAACAG ACATGAGCAA AGAGCGGAGT TCTATAACAG AATAAATAGA TTCACAATCA ATCTTACAGT TCAATTGATT CGAAACGAAA GATCAGAACT AACTGGCTAT ATAAATAGAA ATTAATAGAT CAGCCAATTT TGTCTACTGA TATCTAATGA TTAT // ID R25_0_0000200 standard; DNA; UNC; 792 BP. XX AC R25_0_0000200 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000200 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005f04.f1; XX FH Key Location/Qualifiers FH FT source 1..792 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000200_A FT misc_binding 114..147 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000200_1" FT /note="Base quality score is 1.9575e-04" FT misc_binding 147..180 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000200_2" FT /note="Base quality score is 2.1315e-04" FT misc_binding 180..213 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000200_3" FT /note="Base quality score is 1.5513e-04" FT misc_binding 213..246 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000200_4" FT /note="Base quality score is 1.5540e-04" FT misc_binding 246..279 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000200_5" FT /note="Base quality score is 7.2706e-05" FT misc_binding 279..312 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000200_6" FT /note="Base quality score is 1.0836e-03" FT misc_binding 312..345 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000200_7" FT /note="Base quality score is 1.0379e-04" FT misc_binding 345..378 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000200_8" FT /note="Base quality score is 2.3787e-04" FT misc_binding 378..411 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000200_9" FT /note="Base quality score is 8.6737e-05" FT misc_binding 411..444 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000200_10" FT /note="Base quality score is 3.2724e-04" FT misc_binding 444..477 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000200_11" FT /note="Base quality score is 3.3536e-04" XX SQ Sequence 792 BP; 226 A; 207 C; 164 G; 195 T; 0 other; TGATGTATAC GATTCACTAT AGGGCGAATT GGGCCCTCTA GATGCATGCT CGAGCGGACG CCAGTGTGAT GGATATCTGC AGAATTCCAG CACACTGGCG GCGTTACTAG TGGATCTAGA ACGTAGCGTA CTCTATAATA CAATAGATCT ACAAATCGTG CATTTGCGAT CGTACTTAGA TCTAATGTAT AGAGCTCGGC TGACTCCGTT AGATCTAGCC AAGCGCGCGT GAGATACTAT CATAGATCTA TTATGCAATG GCGGCTGTGA ATTTGTAGAT CTATAGGTCG CGTAGTACAC AGTGTCGCTA GATCTATCAC GCGAGTTCCA TCCTTACTAC CTAGATCTAC CTTTCACATC ATACATATGC TGCATAGATC TAGATGCTAC GCCCAAGTAA GTTGATGTAG ATCTACATTC GAAGGCCAGA CATGGTCTCA TAGATCTAAC GGTCTTTTTA TGGGTATGGG TTCTAGATCC GAGCTCGGTA CCAAGCTTGA TGCATAGCTT GAGTATTCTA TAGTGTCACC TAAATAGCTT GGCGTAATCA TGGTCATAGC TGTTCCTCGT GTGAAAACCC CCGCGAGAGG TACTCCGAAG TCCAGCACGG GCATGGTTCT CCACAATCAC GACCGCGACG GTATCACACA TTACACAAGC ACGCTAATAC CAATACCAGA CGACTCAACC ACTCTGACGA CCACTCGCCA ATCACTCCGC GCAGACCACC ACACAAACCA ACAGACAAAC ACACGCACGC ACATCATACT ACCACACTCA CAACAACCAT AA // ID R25_0_0000201 standard; DNA; UNC; 843 BP. XX AC R25_0_0000201 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000201 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005f06.f1; XX FH Key Location/Qualifiers FH FT source 1..843 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000201_A FT misc_binding 121..154 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000201_1" FT /note="Base quality score is 2.3749e-03" FT misc_binding 154..187 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000201_2" FT /note="Base quality score is 7.2572e-03" FT misc_binding 187..220 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000201_3" FT /note="Base quality score is 2.1392e-02" FT misc_binding 220..253 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000201_4" FT /note="Base quality score is 3.8757e-02" FT misc_binding 253..286 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000201_5" FT /note="Base quality score is 9.8519e-03" XX SQ Sequence 843 BP; 335 A; 211 C; 156 G; 141 T; 0 other; AGAGTCGCAT GATGTATACG ATTCACTATA GGGCGAATGG GCCCTCTAGA TCATGCTCGA GCGGCGCCAG TGTGATGGAT ATCTGCAGAA TTCCAGCACA CTGGCGGCCG TTACTAGTGG ATCTACACTG GGATACGAGG GGGGGTATCA TAGATCTACG CGCATCCAAG GAAAGTTAGG CTATAGATCT ATCGATCTTT ATGGAGCGGT GGCCCATAGA TCTATCAACG TGGCGGGAGC GGGGGCACGT AGATCTAAAT CTAACCCCCC CATTCAAAAA CATAGATCCG AGCTCGGTAC CAAGCTTGAT GCATAGCTTG AGTATTCTAT AGTGTCACCT AAATAGCTTG GCGTAATCTT GGTCATAGCT GTTACCTGTG TGAAAGTGAC GCGAGGTACA CGCAAGACAT GACCGACAGG TTCCCCCAAG TCAACGCACC GCCAGGGATC GCCCAAAGAA ACAGAGCAGA CAACACCTCG ACCACATACA AGAAAGCAAA GAACAACCAC ATAACGCGAC AAGAAGCGCC ACACAACACG ACACGCCACA CGGCACAACA AAAAGACACA AAAGAACGGC AACCAAATCA CGCAAAAACA AACGAGACAC AATATCGAAG AACAAATAAA CACACCCCAT AAAAAAAGTA ATAAACCATA TAAAATAAAA AAAACAATAA CAAATAAATC TCAACCAAGA ACAATGAATA ATAACTGACA ACAGCCACCA ACATAAATAA ACAATAAAAG AACAATAATC AACAATCAAA ACACAACCAC AACATCAACA ACATCACACC TCTAGCTATC AGCAATACAA AAACAATAAA CAAATCCACA TAT // ID R25_0_0000202 standard; DNA; UNC; 549 BP. XX AC R25_0_0000202 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000202 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005f07.f1; XX FH Key Location/Qualifiers FH FT source 1..549 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000202_A FT misc_binding 115..148 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000202_1" FT /note="Base quality score is 9.1276e-03" FT misc_binding 148..181 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000202_2" FT /note="Base quality score is 1.1910e-02" FT misc_binding 181..214 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000202_3" FT /note="Base quality score is 7.7460e-03" FT misc_binding 214..247 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000202_4" FT /note="Base quality score is 8.8121e-03" FT misc_binding 247..280 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000202_5" FT /note="Base quality score is 1.0511e-02" FT misc_binding 280..313 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000202_6" FT /note="Base quality score is 5.6214e-02" XX SQ Sequence 549 BP; 133 A; 122 C; 142 G; 152 T; 0 other; TGAATGTATA CGTTCACTAT AGGGCGAATT GGGCCCTCTA GATGCATGCT CGAGCGGCCG CCAGTGTGAT GGATATCTGC AGAATTCCAG CACACTGGCG GCCGTTACTA GTGGATCTAT AATTCTTCTG TAAGCGGTCG GACTTAGATC TAGAGGACCG ATGTCGAGGT GAAGCGCTAG ATCTAGGTGA TTAACTCGAA TTTCCCGTAG TAGATCTAAT GTACCCGAGG TGCGATCACG ATCTAGATCT AAAACCTCAA ACAAGGCCGC CTCCTCTAGA TCTACCTTTC TACGACTCAC ACACGGCCCT TGATCTATGT GGAAGTAACG TTGTGGGGGT TTACCATGTT AGATCTTAAT TGGCCAATGG TGGTTCACAA GAGCTTAAGG AGGGTTTAGA TTCCCGAAGG CTCCGGTTAC CAAAGCTTGA TTGCCATAGC CTTGGAGTTA ATTCCTTATA GGTGGTCACC CTTAAAGTCG GCTTGGGCCG TTAACTCCAT TGGTCCATTA GGCGTGTTTA TCCATGGTGG TTGAAAAAGG TCGACCGGA // ID R25_0_0000203 standard; DNA; UNC; 834 BP. XX AC R25_0_0000203 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000203 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005f08.f1; XX FH Key Location/Qualifiers FH FT source 1..834 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000203_A FT misc_binding 126..159 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000203_1" FT /note="Base quality score is 1.0114e-04" FT misc_binding 159..192 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000203_2" FT /note="Base quality score is 1.9237e-04" FT misc_binding 192..225 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000203_3" FT /note="Base quality score is 8.1075e-04" FT misc_binding 225..257 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000203_4" FT /note="Base quality score is 3.9936e-04" FT misc_binding 257..290 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000203_5" FT /note="Base quality score is 6.4921e-04" FT misc_binding 290..323 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000203_6" FT /note="Base quality score is 3.7637e-03" XX SQ Sequence 834 BP; 305 A; 217 C; 148 G; 162 T; 2 other; CGGTTAAAAT CCAGTGATGT ATACGATTCA CTATAGGGCG AATTGGGCCC TCTAGATCAT GCTCGAGCGG CGCCAGTGTG ATGGATATCT GCAGAATTCC AGCACACTGG CGGCGTTACT AGTGGATCTA GTATCGATAT TAAGCTCTGT CTTTTTAGAT CTAAAAGACA TAATCTGGCA CTTTTGAGTA GATCTAACAA AGCACGAAAA TGAAGTCCAC CTAGATCTAG AGGAGCTGCT TCGCATGTTT GAATAGATCT ATCGGTTACT CCTTGACACT TCAGCCTAGA TCTAAGCTAC CTACGTCCTC CAACCTCTTT AGATCCGAGC TCGGTACCAA GCTTGATGCA TAGCTTGAGT ATTCTATAGT GTCACCTAAA TAGCTTGGCG TAATCATGGT CATAGCTGTT TCCTGTGTGA AAGTCGCGCG GGGTATCTCA GAGACAAGAC CGCGAGGATC CCCCAGTCAC GAACGACAGG GATCACCCAG TAAGCAGAAG CCAGAACCCC CCACCACCAC ACGCAACCCC ACACACACAA CCCAAACAAA GCAATACAAA CACAACAATA CGACCACCAA AAAACAAAAA AAAACACAAC AAAATAAACA AAACACAAAC AACAGATGCA CAAATAACAA AAACAAATAA CATAACTAGA CAAGAGACTA AAATAGATAA GCACACGTGC ACAAGAAGAA CCAACCAGAG CCGCAGCTAA CAGAAAACCA AAAACACACA AAGACAACGA TAACAAAATA CAGTACCTAT TTTGCTCACT CGTCTCGCAT TGGCGACCNT NTAGGCAACA CACAACCAAC AGAACAACAT CCAC // ID R25_0_0000204 standard; DNA; UNC; 787 BP. XX AC R25_0_0000204 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000204 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005f10.f1; XX FH Key Location/Qualifiers FH FT source 1..787 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000204_A FT misc_binding 109..143 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000204_1" FT /note="Base quality score is 5.4654e-02" FT misc_binding 143..176 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000204_2" FT /note="Base quality score is 4.2803e-02" FT misc_binding 176..209 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000204_3" FT /note="Base quality score is 2.9744e-02" FT misc_binding 209..242 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000204_4" FT /note="Base quality score is 2.2731e-02" FT misc_binding 242..277 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000204_5" FT /note="Base quality score is 9.9617e-02" FT misc_binding 277..312 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000204_6" FT /note="Base quality score is 1.2693e-01" FT misc_binding 312..347 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000204_7" FT /note="Base quality score is 4.5427e-02" FT misc_binding 347..381 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000204_8" FT /note="Base quality score is 8.8917e-02" FT misc_binding 381..415 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000204_9" FT /note="Base quality score is 3.4578e-02" FT misc_binding 415..448 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000204_10" FT /note="Base quality score is 1.4078e-01" XX SQ Sequence 787 BP; 272 A; 213 C; 120 G; 182 T; 0 other; AATCGATATG ACTCACTATA GGGGAATAGG GCCTCTAGAT CTGCTCGAGC GGCGCCAGTG TGATGGATAT CTGCAGAATT CCAGCACACT GGCGGCGTCT ACTAGTGGAT CTCATCAAGG ATTAGTCATT AGGTGTCAGT AGATCTAGAA CAGCTCGGCG AAAGCTATCC TTTAGATCTA ATCCCGTAAA GTGGCTACCT CCCCCTAGAT CTACACCCAA TCTCCCACGG CACGCAACTA GATACTACGG GGCCCCCCCC CCGCATAAAG ACGTAAATCT AAGTGGATCC CCTATATTAC GTACGGTTAA GATACTAACC GATACGCCAG CAAAACAGTA TGCTAAATCT AGTAAAACGT CCCTCCTGCT TCGCAAATAG ATCTACAGGC CTCAAGGTGG TATCCCATTG ATAGATCTAT TCAGCTTTCC ATTTCTTATC GACTTAGATC CGAGCTCGGA ACCCAAGCTT GATGCCTAGC TAGAGTATCC TATAGTGTCA CCTAAATCGC TTGGAGTAAT ACCTGGTCAT AGCTATTATC CTGTGTTCAC AATCGACGCC AGGAATACCA CCCAACAACA CAACAGCAAG TATACACCAA AATAAAAACA CACAATTAAT CACAACTCCA TACAAACACG AACAGCAATC AAACATACAA TACACACACC AATACTCACT CACTAACAAC ACACATATAA AAATCTAAAC TTACCTATCT CTTAATATCC AACTAAACAA ATCTACAACA AAAAAAATAA TAATCTAACA ACTATCACAT CAATACA // ID R25_0_0000205 standard; DNA; UNC; 800 BP. XX AC R25_0_0000205 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000205 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005f11.f1; XX FH Key Location/Qualifiers FH FT source 1..800 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000205_A FT misc_binding 137..170 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000205_1" FT /note="Base quality score is 2.2280e-02" FT misc_binding 170..203 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000205_2" FT /note="Base quality score is 2.2947e-02" FT misc_binding 203..236 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000205_3" FT /note="Base quality score is 2.0712e-02" FT misc_binding 236..269 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000205_4" FT /note="Base quality score is 1.5600e-02" FT misc_binding 269..302 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000205_5" FT /note="Base quality score is 1.8027e-02" FT misc_binding 302..335 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000205_6" FT /note="Base quality score is 3.5033e-02" XX SQ Sequence 800 BP; 243 A; 203 C; 147 G; 204 T; 3 other; AACCCGTTAT CTATGGGCGA ATGGGCCTCT AGACGCATTG CTCAGCGGCG CCAGTGTGAT GGATATCTCG CAGAATTCCA GCACACTGGC GGCCGTTACT AGTGGATCAA CGTCTCTGTC GCCTTCGACT ATCTAGATCT ATTCTCACGG TAGGCGCGCT ATTGCTTAGA TCTAGTACTT GGCAGATCGC AATGGTCGGT AGATCTAAGC TTACCTGGAC GTTTAATCCT AATAGATCTA GGATATTGTC CTAGGCGCGC GGTGTTAGAT CTATCTGCCT ACCACCCTAA CTGTCTATTA GATCTATGTC ATCAAATCCG CTTCGTAGGC CTAGATCCGA GCTCGGTACC AAGCTTGATG CATAGCTAGA GTATTCTATA GTGTCACCTA AATAGCTTGG AGTAATCCTT GTCATAGCTG TTTCCTGTGT GAAAGTGTCG CCAGTAATTG TCACAGACAT AGCGGCGGAG TATTCTCACC AAGATGGCCC TGTGTTACAC CTCTCCGCAC ACGGTTAACC TCAAAACTAC ACGGCAAATA TATACCTCAC CCACACACCA ATAACGCCCA CTCAACCCAC CACACGAACA CTTAACACGA ATCATAACGA GAAACTACAC ATACTACAGC GACATACAAG AATATCACAG TATATGAACA AAAGATCAAA AAAAAAAAGA GTATATCAAT ATACAATCTA CTCACAAAGA CAGGATCTAC ACATTACTGA AGTACACAAA ACAACGTCAA AATACTTATC TTCATTTTTT TCTACCCTAC TTTGNNNTAG AGCCGAAAGA // ID R25_0_0000206 standard; DNA; UNC; 911 BP. XX AC R25_0_0000206 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000206 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005f12.f1; XX FH Key Location/Qualifiers FH FT source 1..911 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000206_A XX SQ Sequence 911 BP; 357 A; 252 C; 116 G; 178 T; 8 other; NGGAATACAC CGGCAGGAAT GTATACGATC TCACTATAGG GCGAATGGGC CCTCTAGATC ATGCTCGAGC GGCGCCAGTG TGATGGATAT CTGCAGAATT CCAGCACACT GGCGGCGTTA CTAGTGGATC CGAGCTCGGT ACCAAGCTTG ATGCATAGCT TGAGTATTCT AGTGTCACCT AAATTGCTTG GCGTAATCAT GGTCATAGCT GTTTCCTGTG TGAAACTGCC GCCAGAGTTC TCCCAGTCAC GACCGCCAGG GTCCACCCAG ATCACGACAG CAAAAAGTTA TCCAACATCC ACGATCGACA GGACTATACA AATTATACAC GATGAAGAAA TAAAAAATAA ATACAAATAA TCACACATAC AAACAAAACA CACACTTATA ACACAAAATA AAAAAAAAAA AATAGCAACA CAAAAAATCA TAGAAACAAA TACAATGAAC CTCAACTCCT TTTCACCCTC AAACAAACGA CACCCCAACA CTCACAACCT CAAAAAGGAC ATAACATCTC ACCATCACTT ACTAACATTA CCACTATAAC TAAACAACTC CACAACCCAC ATCACCACAC ACTAATAAAT ACAATACAAA ACCACACCTC ACACTCCCTA CATTCCACAC CACAAAAAAC CACACTACAA CTAACAAGAA ACACTCCCAA CTACTGGTCC ACTACAATAC TGTAAAGAGA CAACAAACGA ACGACGACAC CAACTCAACT AGCTACTAAG CCAAATCCGA CGACGTAGCT TTCGATACAA TCAGTGAACA GGCATACATA ATGAAACCAA CGACTAAGAA TCATACGCAG AGAATCAAAC ACACACCGAT ATAATACTCT TCTCCTTCTT TATTATTACA ATCTATCCCT ATTCNNNNNN NAATAAAAAA CGACCAATAC T // ID R25_0_0000207 standard; DNA; UNC; 870 BP. XX AC R25_0_0000207 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000207 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005g05.f1; XX FH Key Location/Qualifiers FH FT source 1..870 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000207_A XX SQ Sequence 870 BP; 374 A; 256 C; 104 G; 136 T; 0 other; TATCAGCATG ATGTATAGTA TCATATAGGG CGAATTGGGC CCTCTAGCAT ACATGCTCGA GCGGCGCCAG TGTGATGGAT ATCTGCAGAA TTCCAGCACA CTGGCGGCCG TGACTAGTGG ATCCGAGCTC GGTACCAAGC TTGATGCATA GCTTGAGTAC TATAGTGTCA CCTAAATAGC TTGGCGTAAT CTTAGTCATA GCTGTTTCCT GTGTAAAAAT GACGCGAGGG ATCCCCCGCT AGTCACGACC AGCGAGGGAT CCCCGGAGAT ACGACCGATG ATAGGTACAC ACCCAACTAC AACTAGAAAG GCGGCCACCA CAAATTGAAG ATATGTCTCT CCCTCTAATA ATCAAATAAC ACCAAGCACC TACACAACCT ACAGATACCC ACGAATCACA AAAAAAACAC AGATATCACG AATACAAAAA ATTAACAAAT TCATCGACAT CACACCCCGA CACCCAATCA CCAAGCACTA CAAAACAACT ACCACACAAA ACATGCCCAC CAAAAGTCCA CCCCTCTACC CACGCTCCAC CACAAACAAA AATCATAACA ATTATCACCC CAACAAACAA CTAATCACAA CAACTAAAAC TACCAAAACA CAAAACCACT CTTCACTCAT CTCCAACACA ATCCAACTAA TCACAAAAAC ACAAAGAAGC CACAAAACCA CAACCAAAAC ACAAAGAAAC AACAAACAAA TAAAAGAAAC CAGAACAACC AACCAACAAC CAACAATAAC ACAAAACAAA CAACCAAATA ACAAAAACAA AAATCAAACA ACACAAATGG CAAAAAAAAC ACTCAAAACA TAACACCAAT ACTACACATC ACTAAAAAAC ACAAACACAT CACCCATATC // ID R25_0_0000208 standard; DNA; UNC; 978 BP. XX AC R25_0_0000208 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000208 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005g08.f1; XX FH Key Location/Qualifiers FH FT source 1..978 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000208_A XX SQ Sequence 978 BP; 429 A; 271 C; 106 G; 171 T; 1 other; NCCAATCTCG CAGGAATGTA GTACGACTCA CTATAGGGCG AATAGGGCCC TCTAGATACA TGCTCGAGCG GCGCCAGTAT GATGGATATC TGCAGAATTC CAGCACACTG GCGGCCGTTA CTAGTGGATC CGAGCTCGGT ACCAAGCTTG ATGCATAGCT AGAGTATTCT ATAGTGTCAC CTAAATAGCT TGGCGTACTC TTAGTCATAG CTGTTTCCTG TGTGAAAAGG CCGCGAGGTA TCTTCCCAGT CACGAGCGCC AGGATTCTCC CGAGTCAAGA CAGCAAAGAA ACCCCCATCT AACAAATGTT AAACAACACA CACATTTCAG TGACAAGAAA CGGACATACA ACAATGAGAA AATATCAACG CAACTAAAAA ATAACATAAG TATATTAAAA AAATAAACAT AGTTCTAATA ATGGTATAAT CAAAACAACA CATCACAACT ACAACACCAA TATACCATGA AACAATAAAC ACAAATAGAA ACAAAACAAA ACGAATAAAT TACATAATAC AACTCACCTA CCATCTAAAT TACATCCAAC CACAACTAAA AACCAAAACA AACAAGTACA GATAACAACC ATCCACTAAT AACTAGACCC ACAGACTCAA AACTCACACA CTACAAAACA CAACATACAC AAAAAGACAC CACATCAAAA CAAAACACCA CACTCCACAC ACACAACCAA TAACTACACA CACAAGAACA AAAATATACT ACTACGAATC ACTACCTAAC TGCACAAACA CAACACTACT GACAAACAAC AACATAACAC ACCACGAGAT CGACCACTCA ACTCAACACA ACAACAAGAA CTAACACCAT GTTACTCACA CACGCACCAA ACACACCACA ACTACACACC AACAACAAAC AATAAACTAT CTAATATAAA TGTACACTAA CAAAACACTA ACAATCTATC TCTAACCAAC CCTCACCCAA CAACTATAAC CAATAAAC // ID R25_0_0000209 standard; DNA; UNC; 876 BP. XX AC R25_0_0000209 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000209 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005g12.f1; XX FH Key Location/Qualifiers FH FT source 1..876 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000209_A XX SQ Sequence 876 BP; 310 A; 190 C; 178 G; 198 T; 0 other; TGGACACGCG TGATGGATAC GATATCACTA TAGGGCGAAT AGGGCCCTCT AGATAGCATG CCGAGCGGCC GCCAAGTAGT GATGGCATAT CTAGCAGAAT ACCAGCACAC TGGCGGCCGT TACTAGTGGA TCTATCAACC ACACATCTAG TACTCACAGC GTTAGATACT AAAGGTGGGA GAAGCTATTG CAATTTGGGT AGTAGACTCT ACACGACATG CGTAGCAGGC GGGCCATATA GGGTACGATC TAATAGCCGT CTACTAGACA GGTGGTAGCG ACTGTAGCAT CTACGTAATC GGGCAATTAG GCAGACGAGA GCACCCTTAG CATACTAAAA TAACCCTTCG TGGCACACGA CCGTAAATAC TATACTAACA ATTGACAAGA CCCAAGCTAG ATCTAAACAC CGGTAGCTAC AGCAAATATC TAGATACCGA GCTCGGAACC AAGCTTGATG CATAGCTTTG AGTATACTAT AGTGTCACCT AAATAGCTTG GCGTAATCAT AGTCAATAGC TATATCCTGT GTGAAACTCG GGAGGGGTTC ACCCACATAC AAGCAGGGCA GGTTTACCCG AATAGGACGA GACTCGCGAT CTTCAGATAT CGGTCGTGAT GTTGCGTACA AAATCAAACA GAATTAGGAA CAACAACACT AAAAATAAAC AATATCATAT GACATGATAT TCACACACTA TCACTAAGCA ATATAAAGAA AAATAAATGA AACAACAACA ACAACTAACA TAGCTAAAAA GGTAACAATA AGGAAGATCC GAATCAATGT ATATGTTGTA CTATCTGAGT ATTATCAACC TTACCATCTT ATACATACAT CACAACAATG AACATAGCAT TCAGTCTATA GAACAT // ID R25_0_0000210 standard; DNA; UNC; 819 BP. XX AC R25_0_0000210 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000210 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005h03.f1; XX FH Key Location/Qualifiers FH FT source 1..819 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000210_A FT misc_binding 140..173 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000210_1" FT /note="Base quality score is 6.4734e-02" FT misc_binding 173..205 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000210_2" FT /note="Base quality score is 7.0266e-02" FT misc_binding 205..239 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000210_3" FT /note="Base quality score is 7.3178e-02" FT misc_binding 239..272 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000210_4" FT /note="Base quality score is 6.4465e-02" XX SQ Sequence 819 BP; 303 A; 209 C; 115 G; 190 T; 2 other; AATTGTATAG ATTCACTATA GGGCGAATAG GGCCTCTAGA TCATGTCTAC GGCCGCAGTA TGATGGATAT CTAGCAGAAT TCCAGCACAC TGGCGGCCGT TACTAGTGAT CTATCTAATG TGTACATACT TTTATGTAGA TCTAAATCTC GTTGGCTAGC CCTCCCGTCT AGATCTAATT ACAGTGACGG CCAGACATCA CTAGATCTAA ATACTCAATC CGACATCTTT AAAGCTAGAT CTAGGCCCTG GGTTAGATAA GAATTCAGTA GATCCGAGCT CGGTACCAAG CTTGATGCAT AGCTTGAGTA TTCTATAGTG TCACCTAAAT AGCTTGGCGT AATCATGGTC ATAGCTGTTT CCTGTGTAGA AAGTGACGGG AGGTTCCCCG GAGATACGCA CACGACAAAT AACACAAACA TAAAAACCAC CACTTATATT ATCAATATCC TATAAACCAA TACATCGCTA ATAACACAAA TTACAAACTA AAACACAACA ATATAAACAT AAACTCATAA ACTCACATAT CAACTAATAT TAAATCAAAT AATCACACTC AATATATAAC AACATACACT AAAAGACGAA AAATAAACTA GCAACTCACA CAAAGACGAG TAAACAAAAC ATACAACCCA ACCTCTACCA ACTCCTAACA CCATGAAAAA GACATAGTCC GTCCCACCAC ACCCTCTAGC AAGCTACCAC GACTATCACT CCACCAACCA CTCGACACAT TACCACTACT ATANNGGCAA CCTACCTCTA CATCTACTAA CTGAGCTTAC GAACGAAGCA ACCACGATAA AACACGTCA // ID R25_0_0000211 standard; DNA; UNC; 680 BP. XX AC R25_0_0000211 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000211 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x005h09.f1; XX FH Key Location/Qualifiers FH FT source 1..680 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000211_A XX SQ Sequence 680 BP; 261 A; 173 C; 122 G; 123 T; 1 other; AGTAGTAAAA NTTTGCATGA TGTATACGAG TCACTATAGG GCGAATTGGG CCCTCTAGAT GCATGCTCAG CGGCGCCAGT GTGATGGATA TCTGCAGAAT TCCAGCACAC TGGCGGCCGT TACTAGTGAT CCGAGCTCGG TACCAAGCTT GATGCATAGC TTGAGTATTC TATAGTGTCA CCTAAATAGC TTGGCGTAAT CTTAGTCATA GCTGTTTCCT GTGTGAAATC CGCCGCCAGG GTCTTCCCAG TCACGACCGG CAGGGATCAC CCAGATCACG ACATGAAAGA GAATGACACA ATCACGACCG ATAAGACACG ACTACATTCC GTAGCTAATT CGCGCGCCCA ACACAATTGA TAGCTAGAGC ACGCCAACCA CAGCTCAAGG GGACCGCGGA CCACCAAGTA AACACAACAG GGCGCAACGC ACAGCCCGAA ACCCGCAGGC CGAACAAGTA AGCTGAAGCA CCGCACGCAC AACAAAAAAA ACACGACAAC AAAACAACAA CAGTCAAAAA CCAACTAAGA AAATATATAC GAACAAAACA AATAAAAAAG ACTCAGTAAA ATATCACACC ACAACATAAT CCCAACATAC AAATATACAA TACTTTTAAA CATAAAAACA TTCAATTAAC TAATTAAAAA TAATAAATCA AAAAAACAAA AACCACCATA // ID R25_0_0000212 standard; DNA; UNC; 666 BP. XX AC R25_0_0000212 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000212 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x006a04.f1; XX FH Key Location/Qualifiers FH FT source 1..666 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000212_A FT misc_binding 113..146 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000212_1" FT /note="Base quality score is 4.5416e-02" FT misc_binding 146..179 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000212_2" FT /note="Base quality score is 1.0511e-03" FT misc_binding 179..212 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000212_3" FT /note="Base quality score is 1.1004e-03" FT misc_binding 212..245 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000212_4" FT /note="Base quality score is 2.2527e-03" FT misc_binding 245..278 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000212_5" FT /note="Base quality score is 1.3957e-02" FT misc_binding 278..311 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000212_6" FT /note="Base quality score is 2.1244e-04" FT misc_binding 311..344 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000212_7" FT /note="Base quality score is 7.4363e-05" FT misc_binding 344..377 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000212_8" FT /note="Base quality score is 1.1028e-03" FT misc_binding 377..410 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000212_9" FT /note="Base quality score is 1.1087e-03" FT misc_binding 410..443 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000212_10" FT /note="Base quality score is 3.7259e-03" XX SQ Sequence 666 BP; 178 A; 203 C; 135 G; 149 T; 1 other; GTATGTATAG AGTCACTATA GGGCGAATTG GGCCCTCTAG AATGCATGCT CGAGCGGCGC AGTGTGATGG ATATCTGCAG AATTCCAGCA CACTGGCGGC CGTTACTAGT GGATCTATGA TTAGCCCTCC TCGAAACCAC TCTAGATCTA CGGATCAAGA TCGTTCCGCA GGACATAGAT CTAGTGGCCA TACCGGATCT TCTGCTTATA GATCTAATTT GGGGCAACCT AAAGACTCCT GTAGATCTAG TGTGGGCTCG GGGGTGGGAG AGTTTAGATC TATCACCATC CGCAGCTGTA CCACGCTTAG ATCTAGTCAT AAATGTGCTG TCCGGGCGTA TAGATCTAAG GGACTACCCC ACGTCAAAGG CTATAGATCT ATACAACACT CATAGTTATA CACCATTAGA TCTACACACA TTACGCAGAG TTCTATTGAT AGATCCGAGC TCGGTACCAA GCTTGATGCA TAGCTTGAGT ATTCTATAGT GTCACCTAAA TAGCTTGGCG TAATCATGGT CATAGCTGTT CTGGTGTTAA AACAGCGCNC CCCCACCCCC CCTCCCCCAA ACCACCCCAG CACCCCACCA CACAACAACA CCACCCCACC CACACACCCG CGCACCCCCC CACCCACAAC CCCCACCGCG AACACCACAC CACCCA // ID R25_0_0000213 standard; DNA; UNC; 618 BP. XX AC R25_0_0000213 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000213 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x006a05.f1; XX FH Key Location/Qualifiers FH FT source 1..618 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000213_A FT misc_binding 114..147 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000213_1" FT /note="Base quality score is 1.4358e-04" FT misc_binding 147..180 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000213_2" FT /note="Base quality score is 3.0028e-03" FT misc_binding 180..213 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000213_3" FT /note="Base quality score is 2.4486e-05" FT misc_binding 213..247 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000213_4" FT /note="Base quality score is 1.3343e-05" FT misc_binding 247..280 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000213_5" FT /note="Base quality score is 1.4600e-03" FT misc_binding 280..313 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000213_6" FT /note="Base quality score is 6.7557e-05" FT misc_binding 313..346 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000213_7" FT /note="Base quality score is 1.3047e-04" FT misc_binding 346..379 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000213_8" FT /note="Base quality score is 4.5882e-03" FT misc_binding 379..412 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000213_9" FT /note="Base quality score is 2.2747e-03" XX SQ Sequence 618 BP; 191 A; 156 C; 119 G; 149 T; 3 other; AGGATGTATA CGACTCACTA TAGGGCGAAT TGGGCCCTCT AGATGCATGC TCGAGCGGCG CCAGTGTGAT GGATATCTGC AGAATTCCAG CACACTGGCG GCGTTACTAG TGGATCTAGC TAAGGATATG TACGTTGAGC GTATAGATCT ACACTGCCTC CGTAAGTTGC CGCTCTTAGA TCTAACGATG AACGACCAAC CCACTGCATT AGATCTAATC ACGGCACCCC ATTTTTCTGT CTGTAGATCT ACCGAAAACT CCCAATTAGA CTATATTAGA TCTAAGAAAC GTGAAAGGAG CAAAAATGGT AGATCTAGTG CACTCCTCTA CACGATATTG GTTAGATCTA GCCGATGGAC ATTACGAATT TATAATAGAT CTAATACTTG GTGCACGCAA ATTCCGTGTA GATCCGAGCT CGGTACCAAG CTTGATGCAT AGCTTGAGTA TTCTATAGTG TCACCTAAAT AGCTTGGCGT AATCATGGTC CTAGCTTTTT TCCGTTTAAA AAGGNNNTCA ACAAAACTAC CCAAACACAA TCGGACCCAC AAACACACAA CCCCACTCAC CCAAGGCAAA CAACTCCCAC CACCACTGCC ACAACACAAA ACAACAAG // ID R25_0_0000214 standard; DNA; UNC; 657 BP. XX AC R25_0_0000214 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000214 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x006b02.f1; XX FH Key Location/Qualifiers FH FT source 1..657 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000214_A FT misc_binding 119..151 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000214_1" FT /note="Base quality score is 1.5366e-03" FT misc_binding 151..184 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000214_2" FT /note="Base quality score is 1.5608e-04" FT misc_binding 184..217 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000214_3" FT /note="Base quality score is 1.4728e-04" FT misc_binding 217..250 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000214_4" FT /note="Base quality score is 1.0200e-03" FT misc_binding 250..283 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000214_5" FT /note="Base quality score is 6.2780e-03" FT misc_binding 283..316 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000214_6" FT /note="Base quality score is 2.9670e-04" XX SQ Sequence 657 BP; 240 A; 143 C; 133 G; 140 T; 1 other; AACGATGAGA TGTATACGAG TCACTATAGG GCGAATGGGC CCTCTAGATG CATGCTCGAC GCGGCGCAGT GTGATGGATA TCTGCAGAAT TCCAGCACAC TGGCGGCGTT ACTAGTGGAT CTAATGGTTA ACTTGGACAC TACGGGATAG ATCTAGTACT CACACTTCTA AAATGCCCAT TAGATCTACC AGCCCGATAC CTTATAACCA CCCAAGATCT ATCAGAGCGA GTGCGGGCTT CAACTTTAGA TCTATGAGGG GAGGACGGTT GCATAAAGTT AGATCTATCA GAGGGGGATC GTCATGCATG CGTAGATCCG AGCTCGGTAC CAAGCTTGAT GCATAGCTTG AGTATTCTAT AGTGTCACCT AAATAGCTTG GCGTAATCAT GGTCATAGCT GTTTCCCTTG TTGTANAAAT CCCGCGAGGT TACCCACATG ATGAGCAGCG ACAGTGTATT CCACAGAGAT CAAGAACTGA AAGAGTTATA CCCAACTCAC GACGGTCAAG GATATAAAAA ATAAAGAAGA AACAAAACAA AAACAAACAA AAACTACAAA CACTAAATAC AAACAGAAAC AAAAAACAAA AAAACCATCA TCCATCAGAC AAAATAAAGC AATAAGCTAA AACTAACAAC ACATAACACC AAACAAA // ID R25_0_0000215 standard; DNA; UNC; 753 BP. XX AC R25_0_0000215 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000215 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x006b05.f1; XX FH Key Location/Qualifiers FH FT source 1..753 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000215_A FT misc_binding 112..145 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000215_1" FT /note="Base quality score is 9.3692e-05" FT misc_binding 145..178 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000215_2" FT /note="Base quality score is 2.4609e-04" FT misc_binding 178..211 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000215_3" FT /note="Base quality score is 4.5559e-05" FT misc_binding 211..244 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000215_4" FT /note="Base quality score is 6.0312e-05" FT misc_binding 244..277 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000215_5" FT /note="Base quality score is 6.1922e-03" FT misc_binding 277..310 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000215_6" FT /note="Base quality score is 9.1809e-05" XX SQ Sequence 753 BP; 255 A; 170 C; 169 G; 159 T; 0 other; AACGAGATGA TAGATCATAT AGGGCGAATG GGCCCTCTAG ATGCATGCTC GAGCGGCGCC AGTGTGATGG ATATCTGCAG AATTCCAGCA CACTGGCGGC GTTACTAGTG GATCTAGGAT TAAAGACTTA CAGCTAGTAG TTAGATCTAC CTCTAATATT GCACCGGACA AACCTAGATC TAACTAGTTG CTGGACGAGT GGAGTTATAG ATCTATCTCA CTCCACTGTT AGCTCGTCAG TAGATCTACT CGATTCAAAC GCCAATTACA AGCTAGATCT ATAGGTATTG GGATATTAAC TGGGGTTAGA TCCGAGCTCG GTACCAAGCT TGATGCATAG CTTGAGTATT CTATAGTGTC ACCTAAATAG CTTGGCGTAA TCATGGTCAT AGCTGTTTCC TGTGTGAAAA GCCCGACGAG GTATAACCAC GAGACACGAC GGAAAGGGCT AAACAGAGTC AACACCGGAC AGGGAACAAC CAAGAAAAAC AACTGAAATG GTCCACAAGA TTATCCAGAC ATGAGAGAGA CCTCGAACAA AATAGCAACA GCTGGAACCC ACCACTATCC AGACGCGACC TTCTATCTGC GACAACACGA TGTATACGAA CACTGTACAC GGACGTAATA ATGCAAGAAG CAGTCGAAGG AAGAGATAAG AAACACACCT GACAGATGAC ATTCCTCATA TCGTAGCAGT AAGCATAGAG AAAACACAAG AATGACCTAC CACCGCACCA ACAAATGCAA GAA // ID R25_0_0000216 standard; DNA; UNC; 679 BP. XX AC R25_0_0000216 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000216 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x006c03.f1; XX FH Key Location/Qualifiers FH FT source 1..679 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000216_A FT misc_binding 111..144 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000216_1" FT /note="Base quality score is 1.1772e-04" FT misc_binding 144..177 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000216_2" FT /note="Base quality score is 7.7142e-05" FT misc_binding 177..210 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000216_3" FT /note="Base quality score is 1.8451e-04" FT misc_binding 210..243 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000216_4" FT /note="Base quality score is 1.0329e-03" FT misc_binding 243..277 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000216_5" FT /note="Base quality score is 1.0248e-02" FT misc_binding 277..310 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000216_6" FT /note="Base quality score is 2.5320e-02" FT misc_binding 310..343 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000216_7" FT /note="Base quality score is 5.2821e-04" FT misc_binding 343..376 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000216_8" FT /note="Base quality score is 2.9713e-04" FT misc_binding 376..409 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000216_9" FT /note="Base quality score is 6.6038e-04" XX SQ Sequence 679 BP; 209 A; 174 C; 145 G; 149 T; 2 other; AGTGATGTAT AGATTCACTA TAGGCGAATG GGCCCTCTAG ATGCATGCTC GAGCGGCGCA GTGTGATGGA TATCTGCAGA ATTCCAGCAC ACTGGCGGCG TTACTAGTGG ATCTACTTCG TAATATGTTA CATCGACCCT TAGATCTATG ATTGGTCATT CGCGCACATA CATTAGATCT AGGGCTACGG GCCACGTCAT ATAACATAGA TCTAGGAAGG TACCGCCAAC GTCACAAATT AGATCTACGA CGGAGCGGCG GACTGGTTGA CCATAGATCT AAAAACCCCC GATGACAGCA ACCTGCTAGA TCTACCACGT AGGGTGACAT GGTGCCACTT AGATCTATCG GTGTGATGTC GTGGCTTTTT ATTAGATCTA GGTGCTAATC GAAAAGACAA GATATTAGAT CCGAGCTCGG TACCAAGCTT GATGCATAGC TTGAGTATTC TATAGTGTCA CCTAAATAGC TTGGCGTAAT CATGGTCATA GCTGTTCCTG TTTGAAAACG GNANTGCCGC CAAGATACAA AACACACAAC TAGAGACACC ACAACATAAA CCACACACCT ACTAACCAAG ACCGACGCCG CGACACAAAC TACTACGCAC CTCTACACGA CACAGCCCCT TAACAAAACA CCACACCGAC AACACACCAC ACGAGACACA GCGACAGAG // ID R25_0_0000217 standard; DNA; UNC; 640 BP. XX AC R25_0_0000217 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000217 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x006c04.f1; XX FH Key Location/Qualifiers FH FT source 1..640 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000217_A FT misc_binding 108..141 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000217_1" FT /note="Base quality score is 2.0373e-04" FT misc_binding 141..174 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000217_2" FT /note="Base quality score is 5.9912e-05" FT misc_binding 174..207 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000217_3" FT /note="Base quality score is 1.3915e-04" FT misc_binding 207..240 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000217_4" FT /note="Base quality score is 3.4373e-04" FT misc_binding 240..273 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000217_5" FT /note="Base quality score is 1.3667e-04" FT misc_binding 273..306 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000217_6" FT /note="Base quality score is 7.5235e-05" FT misc_binding 306..339 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000217_7" FT /note="Base quality score is 2.5196e-03" FT misc_binding 339..372 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000217_8" FT /note="Base quality score is 3.5083e-03" FT misc_binding 372..405 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000217_9" FT /note="Base quality score is 6.4608e-03" FT misc_binding 405..439 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000217_10" FT /note="Base quality score is 3.1484e-03" FT misc_binding 439..472 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000217_11" FT /note="Base quality score is 4.5065e-04" FT misc_binding 472..505 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000217_12" FT /note="Base quality score is 5.4561e-03" XX SQ Sequence 640 BP; 178 A; 143 C; 151 G; 168 T; 0 other; TGTATAGATC ACTATAGGGC GAATTGGGCC CTCTAGATGC ATGCTCGAGC GGCGCCAGTG TGATGGATAT CTGCAGAATT CCAGCACACT GGCGGCGTTA CTAGTGGATC TTAAGTGCTA TAAAGCTAGA TTGGGTGTAG ATCTATAGCA TTGCTGTTCA CCCACTATTC TAGATCTAGC CCCCACATCG CGGCACGACC AGCTAGATCT ATGCGTACTA CGGAGGAATG TCCCTTTAGA TCTACCAACT ACCGCTCAAA TACTGGCGTT AGATCTAATT TGGAAGTCGA GTGACGCGGT GGTAGATCTA CCACACAAAC GGTGTAGCTT GCAGCTAGAT CTAGGGTAGG ATACGGGCGA CTACGGTTTA GATCTAGCTT ATGCCACCGA CACACTCCCA TTAGATCTAT TGCGTTAGCA GTCATCAGGG GTTGCTAGAT CTATTCGTTT TTTCAGCTCT GGGCAAGGTA GATCTATAGT TACGAGATAG CTGTAACCCC CTAGATCCGA GCTCGGTACC AAGCTTGATG CATAGCTTGA GTATTCTATA GTGTCACCTA AATAGCTTGG CGTAATCATG GTCTAGCTTC GGTGGTTAAA AAAAAGGAGT AACAAAAAAC ACAACAAAAA CTAAACACAA // ID R25_0_0000218 standard; DNA; UNC; 706 BP. XX AC R25_0_0000218 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000218 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x006c07.f1; XX FH Key Location/Qualifiers FH FT source 1..706 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000218_A FT misc_binding 114..147 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000218_1" FT /note="Base quality score is 3.6305e-03" FT misc_binding 147..180 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000218_2" FT /note="Base quality score is 1.0290e-02" FT misc_binding 180..213 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000218_3" FT /note="Base quality score is 3.1011e-03" FT misc_binding 213..246 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000218_4" FT /note="Base quality score is 4.8460e-04" FT misc_binding 246..279 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000218_5" FT /note="Base quality score is 6.7680e-03" FT misc_binding 279..313 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000218_6" FT /note="Base quality score is 7.2961e-03" FT misc_binding 313..346 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000218_7" FT /note="Base quality score is 3.5094e-02" XX SQ Sequence 706 BP; 227 A; 136 C; 187 G; 156 T; 0 other; TGATGTATAC GATCTCACTA TAGGGCGAAT TGGGCCCTCT AGATGCATGC TCGACGGCGC CAGTGTGATG GATATCTGCA GAATTCCAGC ACACTGGCGG CCGTTACTAG TGGATCTATT TCGGTAAATG AGGGCTAGTT AGGTAGATCT ACGATGGCGA ATTTATCCAG AACTATTAGA TCTATATGCG TAGGTGGATA TTCTGTTGGT AGATCTAGAA GGAGGAGGGG GCGCTGGCAT CGTAGATCTA AGGTGAGAGC TGTGGGGAAA TTCGGTAGAT CTAGGAACCA GTTGCAGTAC GTCTGTCGAT AGATCTAACT GGCCCCTCGA AACACCTTCG CGTAGATCTA TAATTTCCAC AAAAAGAACT GCTGTAGATC CGAGCTCGGT TACCAAGCTT GATGCATAGC TTGAGTATTC TATAGTGTCA CCCTAAATAG CTTGGCGTAA TCATGGTCAT TGCTTGTTCC TGGTGGACAC AACGGTGCGA CACATCGAAT AGGGAAGGGG CAAGTAGAAC GACAGACTAC ACGCAAAAAC GGGAAGAGAA GAAGAGACGA AGAAGGAGCA GGAACTAGAA AGTATAGAAG ACAACATTGA AGTCATGTAA GGAGATATAA AGATAATAAT GATAGAGAAA GTGAAGGGAC AAACGAAAAA AACAATCCAC CAACCACCCA CCCCGGCACT ACAACGCTAA ACGAGA // ID R25_0_0000219 standard; DNA; UNC; 729 BP. XX AC R25_0_0000219 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000219 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x006c09.f1; XX FH Key Location/Qualifiers FH FT source 1..729 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000219_A FT misc_binding 109..142 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000219_1" FT /note="Base quality score is 2.5003e-02" FT misc_binding 142..176 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000219_2" FT /note="Base quality score is 8.5985e-02" FT misc_binding 176..210 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000219_3" FT /note="Base quality score is 5.0763e-02" FT misc_binding 210..243 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000219_4" FT /note="Base quality score is 1.9209e-02" FT misc_binding 243..276 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000219_5" FT /note="Base quality score is 5.6348e-02" XX SQ Sequence 729 BP; 240 A; 200 C; 158 G; 131 T; 0 other; TGATAGATAG AGTCACTATA GGGCGAATAG GGCCTCTAGA TACATGCCGA GCGCGGCAGT GTGATGGATA TCTGCAGAAT TCCAGCACAC TGGCGGCGTT ACTAGTGGAT CTAGTTCAAC GGACTGAAGT AAACATTATA GATCTACCGG CGGAAGATAC CCATCCCTGC CATAGATCTA CGTCTGAACC TAGTTCCCCA GAGCGGTAGA TCTATATTGG CCACCATACG CAGCGAACAT AGATCTATAT AAATTATCGC CAAGTCCTCT GATAGATCCG AGATCGGTAC CAAGCTTGAT GCATAGCTCG AGTATTCTAT AGTGTCACCT AAATAGCTTG GCGTAATCAT GGTCATAGCT GTATCCTGTG TGAAAAGGCC GCCAGGGTAC CCCCAGATAC ACGACCCGAC AGGGTTAACA CAGACAACGA CCAGCCAAGC ATCCACAATC ACTAAAAACC ACACCATAAC TACAACCCAA CTCAAAACAC ACCCCACATC CGTCAGAACC GACTGCTCAG GGCAAACCAA CTCACTACTC ACAAGCGACG GGACGAACGC CGACCGATCA ATAAAGTAAA CGTCCACCAT ATCCCGGCCC GAACGACAAT AGAAAAACGC GTAAAAGAAA ACAAGTAACG GCAGACGGAC AACAAAAGAC GACGCAGGAT ACGCCATAAC GTAGAAGTAT CACCCATATA GCACGAGGCA GTCTCGAGCT GCGGCGCGG // ID R25_0_0000220 standard; DNA; UNC; 735 BP. XX AC R25_0_0000220 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000220 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x006d01.f1; XX FH Key Location/Qualifiers FH FT source 1..735 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000220_A FT misc_binding 107..140 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000220_1" FT /note="Base quality score is 1.2355e-03" FT misc_binding 140..173 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000220_2" FT /note="Base quality score is 7.7765e-04" FT misc_binding 173..206 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000220_3" FT /note="Base quality score is 4.5847e-03" FT misc_binding 206..239 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000220_4" FT /note="Base quality score is 2.4144e-02" FT misc_binding 239..272 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000220_5" FT /note="Base quality score is 2.5066e-02" FT misc_binding 272..304 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000220_6" FT /note="Base quality score is 6.7216e-04" FT misc_binding 304..337 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000220_7" FT /note="Base quality score is 6.1572e-03" FT misc_binding 337..370 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000220_8" FT /note="Base quality score is 9.4622e-03" FT misc_binding 370..403 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000220_9" FT /note="Base quality score is 1.1851e-02" FT misc_binding 403..436 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000220_10" FT /note="Base quality score is 7.7877e-03" FT misc_binding 436..469 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000220_11" FT /note="Base quality score is 3.8647e-02" FT misc_binding 469..503 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000220_12" FT /note="Base quality score is 2.3076e-02" XX SQ Sequence 735 BP; 208 A; 153 C; 199 G; 175 T; 0 other; TGGAAGATCA CTATAGGGCG AATGGGCCCT CTAGATGCAT GCTCGACGCG GCGCAGTGTG ATGGATATCT GCAGAATTCC AGCACACTGG CGGCCGTTAC TAGTGGATCT AAACGGGGCC GGACTCATTA TTGGGCTAGA TCTAGGAGAT GTGTAGGTGA TGCGGAAGGT AGATCTAGGG GAACGACACT TGGGAATGTT TGTAGATCTA CTCCCGTACC TAACTTTCAG AGTGTTAGAT CTAGCGTCGG GTTTACCCGG CTTGCCTGTA GATCTAGGTG TACTACCGGA CTTGGTAAGT TAGATCTAGC AGCTGAATGG CAAAGTGCGT TATTAGATCT AAGGGGGCTT CAGAGGCCCG AGAATGTAGA TCTACCGATT GAACTTTAGC AACCTTTCTT AGATCTACAC TTCTGCCACG CTTGTAGTCA CATAGATCTA CATTTCGCGG TGAGTGTCTG GCGATTAGAT CTAGTCGGAG AGCCGTGAAG AAATTTAATT AGATCCGAGC TCGGTACCAA GCTTGATGCA TAGCTTGAGT ATTCTATAGT GTCACCTAAA TAGCTTGGGG TAATCCTGGT CCTAGGTGTT GCTGGTGAAA AAGCCCGGGG GGTAACCCGA CCAAACGCCG GGTTTACCCC ATACAAGCGA AGGTAGCAAC CACAAGAGAA GGGAAACCAA CCACAAAGGA AGAATAACAA ACAGACGAAA CAACATAAAC ATAGAGAAAG AACGC // ID R25_0_0000221 standard; DNA; UNC; 419 BP. XX AC R25_0_0000221 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000221 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x006d03.f1; XX FH Key Location/Qualifiers FH FT source 1..419 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000221_A FT misc_binding 119..152 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000221_1" FT /note="Base quality score is 3.0159e-04" FT misc_binding 152..185 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000221_2" FT /note="Base quality score is 2.5164e-04" FT misc_binding 185..218 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000221_3" FT /note="Base quality score is 5.9654e-04" FT misc_binding 218..251 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000221_4" FT /note="Base quality score is 6.9190e-05" FT misc_binding 251..284 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000221_5" FT /note="Base quality score is 1.2024e-02" FT misc_binding 284..317 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000221_6" FT /note="Base quality score is 6.9671e-03" FT misc_binding 317..350 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000221_7" FT /note="Base quality score is 1.0609e-02" XX SQ Sequence 419 BP; 113 A; 92 C; 106 G; 108 T; 0 other; CAACGACGAG AATGTATAGA CTCATATAGG GCGAATGGGC CCTCTAGCAT GCATGCTCGA CGGCGCCAGT GTGATGGATA TCTGCAGAAT TCCAGCACAC TGGCGGCGTT ACTAGTGGAT CTACGGTGTA TATCGAGGGC CTTTCATTTA GATCTATGAA CTGATGGCCA GACTTTTATG TTAGATCTAG TACTGGTACT ACGTGGGGAT AACATAGATC TAGACTAGCG CGACTGGAGA TCACGAATAG ATCTAAGAAA GCATACACAC TCCCGGCTGC TAGATCTAAG GCAGTAGTAC CGTTTTCGGC ACTTAGATCT AAGTACGCAC CTGGACCTAC CGTGAGTAGA TCCGAGCTCG GTACCAAGCT TGATGCATAG CTTGAGTATT CTATAGTGTC ACCTAAATAG CTTGGCGTA // ID R25_0_0000222 standard; DNA; UNC; 582 BP. XX AC R25_0_0000222 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000222 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x006d05.f1; XX FH Key Location/Qualifiers FH FT source 1..582 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000222_A FT misc_binding 116..151 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000222_1" FT /note="Base quality score is 6.0177e-02" FT misc_binding 151..184 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000222_2" FT /note="Base quality score is 9.8152e-05" FT misc_binding 184..217 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000222_3" FT /note="Base quality score is 1.5652e-04" FT misc_binding 217..250 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000222_4" FT /note="Base quality score is 1.3700e-03" FT misc_binding 250..283 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000222_5" FT /note="Base quality score is 4.6195e-02" FT misc_binding 283..316 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000222_6" FT /note="Base quality score is 6.3957e-02" FT misc_binding 316..349 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000222_7" FT /note="Base quality score is 4.9683e-02" XX SQ Sequence 582 BP; 168 A; 141 C; 141 G; 131 T; 1 other; AGTGAATGTA TACGACTCAC TATAGGGCGA ATTGGGCCCT CTAGATGCAT GCTCGAGCGG CGCCAGTGTG ATGGATATCT GCAGAATTCC AGCACACTGG CGGCGTTACT AGTGGATCTA ATTGATTAGT GGTATGGATT GTGATTATAG ATCTAATGCT AGAAACCGGG GACTACGGTT TAGATCTAGG GTAACCCTCC TCGGCGAAAT GCTTAGATCT AATTAATTTA GGCCAAACGC TCGGCTTAGA TCTATCGCAA TATGAGGTGA GGATACGTTT AGATCTAACG AAAATTAGGT ACCAATCCAC TCTAGATCTA AAGTACCAAT CGAGAGCCCA GAAGGTAGAT CCGAGCTCGG TACCAAGCTT GATGCATAGC TTGAGTATTC TATAGTGTCA CCTAAATAGC TGGGGGTTAA TCCTGGGCCT TAGCTCGTTT CCGTGGGGAA AACGNTGGCC AACCACACAC AACGGACGAC AGACACAACC ACAAGAACAC GCACGCCCAG CCCAACCACC ACGACCGATA CTTCGATCGT CCAGCGAGCA CGGCTCAGTA GCCAGAACAC AACGCAGTCA TC // ID R25_0_0000223 standard; DNA; UNC; 579 BP. XX AC R25_0_0000223 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000223 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x006d10.f1; XX FH Key Location/Qualifiers FH FT source 1..579 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000223_A FT misc_binding 105..137 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000223_1" FT /note="Base quality score is 4.1503e-02" FT misc_binding 137..170 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000223_2" FT /note="Base quality score is 8.6334e-03" FT misc_binding 170..203 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000223_3" FT /note="Base quality score is 3.7770e-03" FT misc_binding 203..236 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000223_4" FT /note="Base quality score is 1.7300e-02" FT misc_binding 236..269 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000223_5" FT /note="Base quality score is 6.6884e-02" FT misc_binding 269..302 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000223_6" FT /note="Base quality score is 1.7417e-02" FT misc_binding 302..334 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000223_7" FT /note="Base quality score is 8.1987e-02" FT misc_binding 334..367 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000223_8" FT /note="Base quality score is 7.5551e-02" XX SQ Sequence 579 BP; 173 A; 114 C; 133 G; 159 T; 0 other; AATGCATGTC ATATAGGGGA ATGGGCCCTC TATGATCATG CTCTAGCGGC GCAGTGTGAT GGATATCTGC AGAATTCCAG CACACTGGCG GTCGTTACTA GTGGATCTAA CAATTTTTTG TGACGGTCGC TTTTAGATCT AGGCTGTTTA GAGAATTGGC AAGATGTAGA TCTAGGAAGG GGAGGGTGGG ATTCACTGTT AGATCTAACT ACGTGCTTAT CCTAATGGCT TGTAGATCTA GCCCGATCCC ATTAGCCGAG ATACGACCAT CTACTGTTGC GTTAATTTGC TGAGCGTTTA GATCTAGAGC TAAACGAAGG GCTGGTATGG TAGATCTACT AGCCTCACCG ACACGAATAT GTATAGATCC GAGCTCGGTA CCAAGCTTGA TGCATAGCTT GAGTATTCTA TAGTGTCACC TAAATAGCTT GGCGTAATCA TTGTCATAGC TGTTTCCTGT GTGAAAAGTC CGCGGGGGAC CCCACAGTAA CGATAGACAG AGTTTCCAAA CTAAGACAAA AAAGTTATAT CATTATAATA ACACAAATTA AACAAACAAA CTCAACAAAA CCAAAATAT // ID R25_0_0000224 standard; DNA; UNC; 632 BP. XX AC R25_0_0000224 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000224 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x006e01.f1; XX FH Key Location/Qualifiers FH FT source 1..632 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000224_A FT misc_binding 109..142 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000224_1" FT /note="Base quality score is 6.4948e-04" FT misc_binding 142..175 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000224_2" FT /note="Base quality score is 3.4093e-04" FT misc_binding 175..208 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000224_3" FT /note="Base quality score is 1.0515e-02" FT misc_binding 208..241 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000224_4" FT /note="Base quality score is 2.7159e-03" FT misc_binding 241..274 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000224_5" FT /note="Base quality score is 2.8478e-04" FT misc_binding 274..307 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000224_6" FT /note="Base quality score is 1.8846e-03" FT misc_binding 307..340 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000224_7" FT /note="Base quality score is 3.4132e-04" FT misc_binding 340..373 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000224_8" FT /note="Base quality score is 1.0549e-03" FT misc_binding 373..406 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000224_9" FT /note="Base quality score is 5.2730e-03" XX SQ Sequence 632 BP; 200 A; 168 C; 128 G; 136 T; 0 other; TGAAGACACG ATCACTATAG GGCGAATTGG GCCTCTAGAT GCATGCTCGA GCGGCGCAGT GTGATGGATA TCTGCAGAAT TCCAGCACAC TGGCGGCGTT ACTAGTGGAT CTATGAACTC TTAGAACACA GCACTATGTA GATCTAATTT GTAAACGTTC ACAATAGTCG TTAGATCTAC ACAACCTCCT TTGCCCCCGC CCCCTAGATC TAAGCAAACC TATGACTGCA CCGGCCATAG ATCTACGGCC TAGTCGTGCG ACGTCCATTT TAGATCTACA AGATCCCTCC AAAACACGAA CCGTAGATCT AATCTCGGCG GGAGCAATAG TGGGCATAGA TCTAGTTACC CCGATCAGAC GTGCAGCGAT AGATCTACAC TTTGGAATGC ACGGTGCCTT GCTAGATCCG AGCTCGGTAC CAAGCTTGAT GCATAGCTTG AGTATTCTAT AGTGTCACCT AAATTGCTTG GCGTAATCCT GGTCATAGCT GTTTCCTGTG TGAAAAAACG CGAGAGGGTA CCACACAGAC AAGAACGGCA AGTCCTCCCA CATCAAAACA GAACCTCACA CCACAACCAA AACAACAAAC ATCAAAAAAC AACAAAAAAA AAGACACAAC CACACCCACA AA // ID R25_0_0000225 standard; DNA; UNC; 618 BP. XX AC R25_0_0000225 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000225 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007d07.f1; XX FH Key Location/Qualifiers FH FT source 1..618 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000225_A FT misc_binding 129..162 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000225_1" FT /note="Base quality score is 3.7083e-02" FT misc_binding 162..195 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000225_2" FT /note="Base quality score is 2.8412e-03" FT misc_binding 195..228 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000225_3" FT /note="Base quality score is 9.3538e-05" FT misc_binding 228..261 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000225_4" FT /note="Base quality score is 8.6910e-05" FT misc_binding 261..294 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000225_5" FT /note="Base quality score is 1.6953e-04" FT misc_binding 294..327 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000225_6" FT /note="Base quality score is 1.0557e-03" FT misc_binding 327..360 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000225_7" FT /note="Base quality score is 7.7847e-03" FT misc_binding 360..393 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000225_8" FT /note="Base quality score is 1.0400e-03" FT misc_binding 393..427 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000225_9" FT /note="Base quality score is 4.1765e-04" FT misc_binding 427..460 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000225_10" FT /note="Base quality score is 2.3142e-03" FT misc_binding 460..493 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000225_11" FT /note="Base quality score is 3.6436e-02" FT misc_binding 493..526 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000225_12" FT /note="Base quality score is 2.9330e-02" XX SQ Sequence 618 BP; 162 A; 122 C; 164 G; 170 T; 0 other; ATAAGGGCAG TGAATTGTAA TACGACTCAC TATAGGGCGA ATTGGGCCCT CTAGAATGCA TGCTCGAGCG GCCGCCAGTG TGATGGATAT CTGCAGAATT CCAGCACACT GGCGGCCGTT ACTAGTGGAT CTATAATTGC AAATGAAAAT TCTATGCATA GATCTAGGGT CGCTTTTACG GAGCTTGTAG GTAGATCTAA ACATCGTGCG GGCGGTCAAG TATATAGATC TATAGACCGA CGTTTTGTGT GAACATTTAG ATCTACCGAA GGTGACAGTC TGGCGAGAGT TAGATCTAGC TCTCTAGGGG TCACTTGCGT CGGTAGATCT AGCTCTGGTG GGAAGTAGGG GGCTCCTAGA TCTATCCGAC GCCTCGCCTA AAAAAGGTTT AGATCTACTG GAAGGGGAGT GATCAGCAAC TAATAGATCT ATACACAGGT CGCACAAAAT AGCGCCTAGA TCTACTCCGG TACCATTTTT TGCGCCAAAT AGATCTATTG ATGTGGAGAG CTTGGATGGT GATAGATCCG AGCTCGGTAC CAAGCTTGAT GCATAGCTTG AGTATTCTAT AGTGTCACCT AAATAGCTTG GCGTAATCAT GGTCTTAGCT GTCTGGTT // ID R25_0_0000226 standard; DNA; UNC; 562 BP. XX AC R25_0_0000226 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000226 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x006e11.f1; XX FH Key Location/Qualifiers FH FT source 1..562 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000226_A FT misc_binding 111..144 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000226_1" FT /note="Base quality score is 1.4087e-04" FT misc_binding 144..177 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000226_2" FT /note="Base quality score is 1.7597e-04" FT misc_binding 177..209 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000226_3" FT /note="Base quality score is 2.4848e-03" FT misc_binding 209..242 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000226_4" FT /note="Base quality score is 9.2073e-03" FT misc_binding 242..275 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000226_5" FT /note="Base quality score is 2.4851e-04" FT misc_binding 275..308 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000226_6" FT /note="Base quality score is 1.2889e-03" FT misc_binding 308..341 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000226_7" FT /note="Base quality score is 7.8319e-03" FT misc_binding 341..374 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000226_8" FT /note="Base quality score is 4.9071e-02" XX SQ Sequence 562 BP; 177 A; 112 C; 138 G; 135 T; 0 other; GGATGCATAG TTCACTATAG GGCGAATTGG GCCCTCTAGA TACATGCTCG AGCGGCGCCA GTGTGATGGA TATCTGCAGA ATTCCAGCAC ACTGGCGGCG TTACTAGTGG ATCTAGTATT AGGAATTAGG TGGTGTATAG TAGATCTAAC GCGAGCTCAT CCCAATTGTA TGTTAGATCT AAATGACAAT TAAGGTGGGG TGCGCTAGAT CTAGTTCAGA TGACGGCAAA ACAGGTCTTA GATCTAGGGA TGTGGGGTCC GGGATGGAAT ATAGATCTAG CTGGGTCCGC CGGGCTCCAG AATGTAGATC TAAGGGCCAG ATTAGCGGAG AATGGGTTAG ATCTAGGCTA CTGATTTCTA CGTCTATATG TAGATCCGAG CTCGGTACCA AGCTTGATGC ATAGCTTGAG TATTCTATAG TGTCACCTAA ATAGCTTGGC GTAATCATGG TCATTGCTGT TTCCTGTTGA AACAGGCAAA ATAAAGAACA CCAAAAAACA AATACAAAAA TAAACACAAA ACAAACCAAA GAAAACAACA AACACACGCA CCAAACCCCC CA // ID R25_0_0000227 standard; DNA; UNC; 597 BP. XX AC R25_0_0000227 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000227 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x006f02.f1; XX FH Key Location/Qualifiers FH FT source 1..597 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000227_A FT misc_binding 108..141 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000227_1" FT /note="Base quality score is 4.6324e-04" FT misc_binding 141..174 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000227_2" FT /note="Base quality score is 1.0497e-03" FT misc_binding 174..207 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000227_3" FT /note="Base quality score is 7.4859e-03" FT misc_binding 207..240 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000227_4" FT /note="Base quality score is 2.5695e-03" FT misc_binding 240..273 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000227_5" FT /note="Base quality score is 1.4578e-03" FT misc_binding 273..306 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000227_6" FT /note="Base quality score is 3.8009e-02" FT misc_binding 306..339 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000227_7" FT /note="Base quality score is 3.2757e-03" FT misc_binding 339..372 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000227_8" FT /note="Base quality score is 8.8563e-03" XX SQ Sequence 597 BP; 175 A; 123 C; 142 G; 157 T; 0 other; ATCAGATCAC TATAGGGCGA ATTGGGCCCT CTAGATGCAT GCTCGAAGCG GGCGCAGTGT GATGGATATC TGCAGAATTC CAGCACACTG GCGGCCGTTA CTAGTGGATC TAGATCATAG CCCGGCTTGA GGAGGCATAG ATCTATCCAA TAGCGGCGAT CACCCTTTTA TAGATCTAGC CTTGGTACTG GATGAAGCTT GCGTAGATCT ATTTTGTCCG CCAAGGCCTA AGGCGTTAGA TCTAATGGAA CGAATGGATG GATATGGGAT AGATCTACTG TTGATGAGGT GGGGTTATAT GTTAGATCTA CGCAGGGCGT CTATGGATTT GGTATTAGAT CTAACCCCTG ACCGATCATT TAAAGTCATA GATCCGAGCT CGGTACCAAG CTTGATGCAT AGCTTGAGTA TTCTATAGTG TCACCTAAAT TGCTTGGCGT ACTCATGGTC ATAGCTGTTT CCTGTGTGAA AATCGCGCGA GGGTACCACG GTGAAAAGAG CCGAGAAGTA TCCACTATAT TAAAAGCAGA CGATTAACTA ACTACAAATA TAATCAACAT ATCAAAACCC TACAAAAACA ATATAACCAC TACACAA // ID R25_0_0000228 standard; DNA; UNC; 252 BP. XX AC R25_0_0000228 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000228 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009g05.f1; XX FH Key Location/Qualifiers FH FT source 1..252 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000228_A XX SQ Sequence 252 BP; 67 A; 55 C; 65 G; 65 T; 0 other; AACGATGGTT GACCGTGATG TATACGACTC ACTATAGGGC GAATTGGGCC TCTAGATGCA TGCTCGAGCG GCGCCAGTGT GATGGATATC TTGCAGAATT CCATGCACAC TCGGCGGCCG TATACTACGT GGATCCCGAG CTCGGTACCA AGCTTGATGC ATAGCTTGAG TATTCTATAG TGTCACCTAA ATAGCTTGGC GTAATCATGG TCATAGCTGT TTCCTGTGTG AAAAGGAAAT GACCAAAAAC AA // ID R25_0_0000229 standard; DNA; UNC; 443 BP. XX AC R25_0_0000229 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000229 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009g10.f1; XX FH Key Location/Qualifiers FH FT source 1..443 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000229_A FT misc_binding 123..156 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000229_1" FT /note="Base quality score is 8.7726e-03" FT misc_binding 156..189 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000229_2" FT /note="Base quality score is 6.6118e-03" FT misc_binding 189..222 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000229_3" FT /note="Base quality score is 6.0856e-02" FT misc_binding 222..255 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000229_4" FT /note="Base quality score is 1.0385e-02" FT misc_binding 255..288 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000229_5" FT /note="Base quality score is 2.7697e-03" FT misc_binding 288..321 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000229_6" FT /note="Base quality score is 8.3427e-02" FT misc_binding 321..354 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000229_7" FT /note="Base quality score is 1.3127e-02" XX SQ Sequence 443 BP; 113 A; 92 C; 112 G; 126 T; 0 other; ATCAAGATGC GTGATGTATA GTGTCACTAT AGGGCGAATA GGGCCTCTAG TATGCATGCT CGAGCGGCGC CAGTGTGATG GATATCTGCA GAATTCCAGC ACACTGGCGG CGTTACTAGT GGATCTATGC GTACGCTGGG CATATGGTCA ATTAGATCTA AGGCAGTCTT TGATCGGTCC CTCTCTAGAT CTATAGATTT CCTTACCTAA CACCCGCATA GATCTAGTGG TACGCAGCAG GTCGAGTTGA TTAGATCTAC GGTAAGTTAC CAATGTGGTG CGTTTAGATC TAGGCGCCTC GGGGGTGCAG ACAGTTATCG ATCTACAATA CTAGTAAACA AATCGTTAAA TAGATCCGAG CTCGGTACCA AGCTTGATGC ATAGCTTGAG TATACTATAG TGTCACCTAA ATTGCTTGGC GTAATCATGG TCATAGCTGT TTC // ID R25_0_0000230 standard; DNA; UNC; 693 BP. XX AC R25_0_0000230 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000230 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x012g02.f1; XX FH Key Location/Qualifiers FH FT source 1..693 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000230_A XX SQ Sequence 693 BP; 294 A; 178 C; 96 G; 125 T; 0 other; CACGCATGAA TGTATACGAC TCACTATAGG GCGAATTGGG CCCTCTAGAT CATGTCGAGC GGCGCCAGTG TGATGGATAT CTGCAGAATT CCAGCACACT GGCGGCGTTA CTAGTGGATC CGAGCTCGGT ACCAAGCTTG ATGCATAGCT TGAGTATTCT ATAGTGTCAC CTAAATTGCT TGGCGTAATC ATGGTCATAG CTATTTCCTG TGTGAAAATC CCGCGAGGTT TCCCACAGAC ACGAGCGAGA GGGAAGCACA GAGAAAAGAG CGATAAAGAG ACACCACAAC ATAAAGAAGA GAAAGCGCCA CACAATAATA AAAACATGAA TAGAACAACA ATTATTTAAT TAAAATACTA TACACACCAA ATCAAAACAG ATAAGTACAA CAACACAACT CCAACTAACA ACACAGGATA CCCAACCCAA GACATTCCAT ACACAGTCCA CACCACTCTA CAAATAACTA AGTACCACAA AAATCACATA TCCTCCAAAA ATACAACACA AATCAATCAT AATCGTTATC CAACACACAC CACGATAAGA AATCTAGACT AAATCATAAC AACAACACAC AAAAAAACCT AATCAACACA AAATAATTCA TACAACCAAA AACCATAACC AACAAAAAAA ATAAACAACC AACACCCATC AACATCAGAA ACACAAACCT CATACCCACC AGA // ID R25_0_0000231 standard; DNA; UNC; 642 BP. XX AC R25_0_0000231 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000231 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x012g01.f1; XX FH Key Location/Qualifiers FH FT source 1..642 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000231_A FT misc_binding 107..140 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000231_1" FT /note="Base quality score is 1.5338e-02" FT misc_binding 140..173 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000231_2" FT /note="Base quality score is 5.7580e-02" FT misc_binding 173..206 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000231_3" FT /note="Base quality score is 5.1097e-02" FT misc_binding 206..239 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000231_4" FT /note="Base quality score is 8.4564e-02" FT misc_binding 239..272 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000231_5" FT /note="Base quality score is 5.5039e-02" FT misc_binding 272..305 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000231_6" FT /note="Base quality score is 9.3744e-02" FT misc_binding 305..339 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000231_7" FT /note="Base quality score is 7.0640e-02" XX SQ Sequence 642 BP; 248 A; 164 C; 95 G; 135 T; 0 other; TATACTGTCA CTATAGGACG AATAGGGCCC TCTAGATACA TTCCAGCGGC GCCAGTGTGA TGGCATATCT GCAGAATTCC AGCACACTGG CGGCCGATAC TAGTAGATCT AGTGGTTTCT TTCAACGGGT TCAAAGTAGA TCTATCTACA ACAGCCCACG GCTATTACGT AGATCTAGGG TGGGGCGGCC TGGGGTGCTG ATTAGATCTA TCTAAAACAA AAACAGCTTC GGCCTTCGAT CTAAGCGCAG TCAATCCCCC TATATAATTA GATCTAGCCA CATACACAGT ACCCGAAATC CTAGATCTAA TAACCCCTAC GATTCCCTAC ACAAATAGAT CCGAGCTCGG TACCAAGCTT GATGCATAGC TAGAGTATTC TATAGTGTCA CCTAAATCGC TATGGCGTAA TCAATAGTCA ATAGCTATTT CCTGTGTGAA AAATCCACAA GAGATATCCA CCACATATCA CACAGCAACA CAAAAAATCA ACAACATAAC ACCCACCACA TACTAACACC TACATCAAAC ACCAAAAAAC AAACTACAAC ATAAACAACA ATAAAAAAAA ACAACACAAA CAAAACAAAA AAACAAAAAA CAATCAAATC AATAAATACA CCTAAACAAA CAAGATCTAC CA // ID R25_0_0000232 standard; DNA; UNC; 630 BP. XX AC R25_0_0000232 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000232 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x012f12.f1; XX FH Key Location/Qualifiers FH FT source 1..630 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000232_A FT misc_binding 95..129 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000232_1" FT /note="Base quality score is 8.2543e-02" FT misc_binding 129..164 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000232_2" FT /note="Base quality score is 2.0891e-02" FT misc_binding 164..196 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000232_3" FT /note="Base quality score is 6.1144e-02" FT misc_binding 196..229 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000232_4" FT /note="Base quality score is 1.1450e-01" FT misc_binding 229..262 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000232_5" FT /note="Base quality score is 9.2981e-02" FT misc_binding 262..296 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000232_6" FT /note="Base quality score is 9.1031e-02" FT misc_binding 296..329 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000232_7" FT /note="Base quality score is 9.7741e-02" FT misc_binding 329..362 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000232_8" FT /note="Base quality score is 9.0059e-02" FT misc_binding 362..395 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000232_9" FT /note="Base quality score is 1.3918e-01" FT misc_binding 395..428 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000232_10" FT /note="Base quality score is 1.1860e-01" XX SQ Sequence 630 BP; 200 A; 165 C; 115 G; 150 T; 0 other; TGGGCAGAAT AGGGCCCCCG AGATACTTCG AGCGGCCGCA GTGTAGATAG GATATCTAGC GGAATTCCAG CACACTGGCG GCCGTAACTA GTAGATCTAT CAAATAAACT CGAAATCTAA CAGCATAGAT CTATAGGAAT AGTAGGCCCC CCGCAGAATC TAGATCTATC CCACCTCGAG CTTTCCGCGT AGTAAATCTA CAAGCACTAT CGCGTGTTAC TTAGCTAGAT CTAAACCCAG GGGCGTACGA CTTCTATATA GATCTACGCG TAGGGACGGT CGACCCTAAG TATAGATCTA AAGATTTTCT GGCGAACGAA TTCCCTAGAT CTCACTAAAA GTGCGCCAAC ATGCTCACTA GATCTAACCT CTTTCAGCCT AACCCCCATC CTAGATCTAC CGCGGGACAC AACCAGTATA CACTTAGATC CGAGCTCGGA ACCAAGCTTG ATGCCAAGCT TGAGTATACA ATAGTGTCAC CTAAATAGCT AGGCGTACTA CTAGTCAATA GCTGAAACTA GTGTAAACAC TCCCTGAGTA CTCCATAACC CCTCGCAGAT ATACACACAA CATACATACC AATCACATAA AATAAAACGT CTTTAAAGTC TATTATTAAT ATACTTTCAC // ID R25_0_0000233 standard; DNA; UNC; 644 BP. XX AC R25_0_0000233 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000233 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x012f11.f1; XX FH Key Location/Qualifiers FH FT source 1..644 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000233_A FT misc_binding 153..186 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000233_1" FT /note="Base quality score is 5.1363e-02" FT misc_binding 186..219 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000233_2" FT /note="Base quality score is 9.4258e-02" FT misc_binding 219..252 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000233_3" FT /note="Base quality score is 2.9143e-02" FT misc_binding 252..285 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000233_4" FT /note="Base quality score is 4.4334e-02" FT misc_binding 285..319 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000233_5" FT /note="Base quality score is 1.5630e-01" FT misc_binding 319..352 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000233_6" FT /note="Base quality score is 7.3852e-02" FT misc_binding 352..386 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000233_7" FT /note="Base quality score is 9.3732e-02" FT misc_binding 386..419 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000233_8" FT /note="Base quality score is 9.1421e-02" XX SQ Sequence 644 BP; 205 A; 153 C; 131 G; 155 T; 0 other; ATGTATACGA TTCACTATAG GGCGAATAGG GCCCTCTAGA ATACATGCTA CAGAGCGGCG CCAGTGTGAT GGATATCTAG CAGAATACCA GCACACTGGC GGCGTATACC TAGTGGATCT ACACTTACCA ATACCACTAT TCCGACATAT AGATCTAGGT ACGATGGGTT GTCCGGCCTT AGTAGATCTA GTCTCGGAAC TTGTCAGGGA TATGGTAGAT CTCACTGCGC CGCTCCCCCC AGCTCCTCTA GATCTATAAG CGATAATGCA TCTCGGAAGT GTAGATCTCG CTCGAGACGT ATTATCCTAG CCTATAAGAT CTCAGTGGTA TAGAGGGCCT AGGGTATCTA GATCTAATGC GGGGGTCTAA GTAATAGTGA TCTAGATCTA GTTCACTCTA TTACACTTCC ATCGGTAAAT CCGAGCTACG GTACCAAGCT TGGATGCATA GCTTGAGTAT TCTATAGTGT CACCCTAAAT AGCTTGGCGT AATCCTGGTC ATAGCTATTT CCTGTGTGAA AATCCCGCCA GGGACCACCA CACAAAACCG TAAAGAAAAC ACACAAAAAA CAACAGATCA ACACGCAAAA TACACTAACA ACACAAAACA AAAAACAACA ATCACAACTT ATAGATAGCA ATAA // ID R25_0_0000234 standard; DNA; UNC; 684 BP. XX AC R25_0_0000234 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000234 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x006g10.f1; XX FH Key Location/Qualifiers FH FT source 1..684 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000234_A FT misc_binding 124..156 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000234_1" FT /note="Base quality score is 2.9046e-02" FT misc_binding 156..189 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000234_2" FT /note="Base quality score is 3.8950e-02" FT misc_binding 189..222 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000234_3" FT /note="Base quality score is 3.3769e-02" FT misc_binding 222..255 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000234_4" FT /note="Base quality score is 1.0089e-02" FT misc_binding 255..288 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000234_5" FT /note="Base quality score is 8.0804e-02" FT misc_binding 288..321 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000234_6" FT /note="Base quality score is 9.9670e-03" XX SQ Sequence 684 BP; 196 A; 214 C; 117 G; 157 T; 0 other; CCCAGGCAAC AGCAGTGATG CAACGATCAC TATAGGGCGA ATTGGGCCTC TAGATGCATG CTCGAGCGGC GCAGTGTGAT GGATATCTGC AGAATTCCCG CACACTGGCG GCGTTACTAG TGGATCTACC TTCGGGGTTT ATGTTAGTTT TATAGATCTA AATTGCATTA GCAGCCTCCA CGTCCTAGAT CTAGCCCGAG AATCCTCCTA AAAGCAACTA GATCTAAAGC CCTAACCCCC CGCTCCGCAG TTAGATCTAG CTATGTTAAC ATTGTTTTGT TTGGTAGATC TATTAGACTG CCAATAAGAC GGTAGATTAG ATCCGAGCTC GGTACCAAGC TTGATGCATA GCTTGAGTAT TCTATAGTTG TCACCTAAAT AGCTTGGCGT AATCATGGTC ATAGCTGTTT CCCTGTGTGA AAAGGCGACG GGCATACCCG CGCACCACCA CGCGCACGCA CCCACCACCA CCACCCCGAG AGCACCCCAG CAACGCGCTC ACACTACATT CTCAATTTAA TCCCAACTCA TCATACATAA AAATAAACTC ATCACCACAT ATAGTTCTTC ATCTCACACC ACCCCTACAA AAAATAAACA CACCGTTACA ACACAAAACA ACCAATACAC ACACTACATA CCAACGCTCC ACCACTCATT CTCACCCCCC CCCCCCCCCC CCCT // ID R25_0_0000235 standard; DNA; UNC; 821 BP. XX AC R25_0_0000235 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000235 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009h02.f1; XX FH Key Location/Qualifiers FH FT source 1..821 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000235_A FT misc_binding 115..148 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000235_1" FT /note="Base quality score is 5.6196e-02" FT misc_binding 148..181 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000235_2" FT /note="Base quality score is 2.9077e-02" FT misc_binding 181..214 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000235_3" FT /note="Base quality score is 6.5119e-03" FT misc_binding 214..247 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000235_4" FT /note="Base quality score is 1.0488e-02" FT misc_binding 247..280 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000235_5" FT /note="Base quality score is 1.9125e-02" FT misc_binding 280..313 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000235_6" FT /note="Base quality score is 3.4319e-02" FT misc_binding 313..346 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000235_7" FT /note="Base quality score is 1.5399e-02" FT misc_binding 346..379 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000235_8" FT /note="Base quality score is 3.5464e-02" FT misc_binding 379..412 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000235_9" FT /note="Base quality score is 5.0186e-02" FT misc_binding 412..446 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000235_10" FT /note="Base quality score is 6.6023e-02" FT misc_binding 446..480 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000235_11" FT /note="Base quality score is 1.1917e-01" FT misc_binding 480..514 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000235_12" FT /note="Base quality score is 1.0936e-01" XX SQ Sequence 821 BP; 252 A; 183 C; 193 G; 192 T; 1 other; AGACTGTATA CGATCTCACT ATAGGGCGAA TTGGGCCCTC TAGATGCATG TCGAGCGGCG CCAGTGTGAT GGATATCTGC AGAATTCCAG CACACTGGCG GCCGTTACTA GTGGATCTAT ATGCTCTATC CAAGCAACAA CTTGTAGATC TAGCGCTCAA GTGATAGAAG CCCGCCGTAG ATCTATGCGT GAGCGAACAA TCCATGCCCT TAGATCTATT GCTCAGGTAA GAAACGGTGG AGGTAGATCT AGATCACCCG GGGTGAGGTC GCGCTTTAGA TCTATAGAAA CCGACCGGCA GGGCACTTGT AGATCTACCT TGAATGGGGA GTCCAGGACT CTTAGATCTA CAGGATGACT CGGATGCAAT GGCGATAGAT CTAGTTCCTA GGCAGGTAGC TGAGGTGTTA GATCTAATAC CCAGGCCCAA GATTTCCCCG GATAGATCTA CGGGCACAGT GTCTTGAAAC TTCGGCTAGA TCTAGGGCTA AAAGGTGGTG CATGGATCGG TAGATCTATC AATTCTGTCT AAGCGAGACG GATATAATCC GAGCTCGGTA CCAAGGCTTG ATGCATAGGT TGAGTATTTC ATATGGTGTC CCTAAATTGG TGGGGAAATC TTGGCCATGC GTGCTGTGNA AACCGGCGCG GGAATACAAA ACACAGAGAA GTATCAACAT ACACACTTAT AAGATAAAAA TAAACATCTA ATCCACACTC TATTCCTACA ACTGCACACA AACAAAAGCT AAAACAACAA CGAATATTAA CAACACATAT CATCTACAGC ACTAATCATA ACATGCACTA CAACACAAAA G // ID R25_0_0000236 standard; DNA; UNC; 629 BP. XX AC R25_0_0000236 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000236 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x012f10.f1; XX FH Key Location/Qualifiers FH FT source 1..629 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000236_A FT misc_binding 113..146 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000236_1" FT /note="Base quality score is 4.1294e-02" FT misc_binding 146..179 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000236_2" FT /note="Base quality score is 2.1596e-03" FT misc_binding 179..212 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000236_3" FT /note="Base quality score is 6.7636e-04" FT misc_binding 212..245 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000236_4" FT /note="Base quality score is 3.1259e-03" FT misc_binding 245..278 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000236_5" FT /note="Base quality score is 1.2187e-03" FT misc_binding 278..311 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000236_6" FT /note="Base quality score is 3.4957e-03" FT misc_binding 311..344 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000236_7" FT /note="Base quality score is 2.4205e-03" FT misc_binding 344..377 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000236_8" FT /note="Base quality score is 7.4196e-03" FT misc_binding 377..410 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000236_9" FT /note="Base quality score is 8.5169e-03" FT misc_binding 410..443 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000236_10" FT /note="Base quality score is 1.1583e-03" FT misc_binding 443..476 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000236_11" FT /note="Base quality score is 4.8481e-02" FT misc_binding 476..508 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000236_12" FT /note="Base quality score is 7.9820e-02" FT misc_binding 508..541 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000236_13" FT /note="Base quality score is 5.6452e-02" FT misc_binding 541..574 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000236_14" FT /note="Base quality score is 1.5477e-01" FT misc_binding 574..607 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000236_15" FT /note="Base quality score is 5.0996e-01" XX SQ Sequence 629 BP; 142 A; 142 C; 167 G; 178 T; 0 other; GAATTGTATA CGTCTCACTA TAGGGCGACT GGGCCTCTAC GATCATGTCG AGCGGCCGCC AGTGTGATGG ATATCTGCAG AATTCCAGCA CACTGGCGGC CGTTACTAGT GGATCTACCC CACTGGCAGA TTAGAGGCGG GTTAGATCTA GCCAAGGTTT CCGCGCGCAC TCCCTTAGAT CTACGATGGG TGGGTCGAGT AACCTGGATA GATCTATTGC TCAATGGGTT GATCGAAACG TTAGATCTAA GGCGGTGGAT TTGCGTTTGG TGAGTAGATC TAAGATCGAG GCACGGCTTA AAGCTTTTAG ATCTACGCTC AATGCTTTAT CGTCACGATT TAGATCTACT GGGTCATGTG GCCCAGTTTG CGTTAGATCT ATTTACAGAG GGGTCCACGT GGCTCGTAGA TCTAGCGGAG GGCGGGAGCG GACCAATCTT AGATCTAGTC TCGAAGTCGT CGCCGGTTCA TATAGATCTA TGACAGTTCC GGTCTCGGTA TGTTTAGATC TATTAAGACT CGGCTCATGG TTCGTTTTAG ATCTCAGGCA ACTTATGCAA CAGCCTAAGC TAGATCTAAT CTCACTTCCT CAGGCCCACA TTATATATCC AGGTCGGTCC CAGTTGTTG // ID R25_0_0000237 standard; DNA; UNC; 752 BP. XX AC R25_0_0000237 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000237 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007a03.f1; XX FH Key Location/Qualifiers FH FT source 1..752 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000237_A FT misc_binding 94..127 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000237_1" FT /note="Base quality score is 2.8419e-04" FT misc_binding 127..160 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000237_2" FT /note="Base quality score is 1.6594e-02" FT misc_binding 160..193 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000237_3" FT /note="Base quality score is 5.0623e-04" FT misc_binding 193..226 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000237_4" FT /note="Base quality score is 2.7445e-03" FT misc_binding 226..259 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000237_5" FT /note="Base quality score is 1.8511e-03" FT misc_binding 259..292 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000237_6" FT /note="Base quality score is 1.7458e-03" FT misc_binding 292..325 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000237_7" FT /note="Base quality score is 8.2537e-04" FT misc_binding 325..358 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000237_8" FT /note="Base quality score is 5.6029e-03" FT misc_binding 358..391 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000237_9" FT /note="Base quality score is 1.6111e-03" FT misc_binding 391..424 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000237_10" FT /note="Base quality score is 1.1782e-03" FT misc_binding 424..456 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000237_11" FT /note="Base quality score is 2.0964e-03" FT misc_binding 456..489 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000237_12" FT /note="Base quality score is 2.6440e-02" FT misc_binding 489..522 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000237_13" FT /note="Base quality score is 4.5790e-02" FT misc_binding 522..555 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000237_14" FT /note="Base quality score is 1.5104e-01" XX SQ Sequence 752 BP; 185 A; 204 C; 194 G; 169 T; 0 other; TAGGGCGAAT TGGGCCCTCT CCAGTAATGC TCGAGCGGCG CAGTGTGATG GATATCTGCA GAATTCCAGC ACACTGGCGG CCGTTACTAG TGGATCTATC TCAAAGACGA TTGACTGCTA TTCTAGATCT AGTCCCGGCG CGGTCCAGGG AGTACGTAGA TCTAATAGCT CGCCTCCATC CTACGGAGCT AGATCTAGCT CCAATGGCCG CCCCGCGTGA CGTAGATCTA TTTCGCAGCC AGCCCGATAC CCCCTTAGAT CTAAGCGTGG CTCGGGGGAG GCCGGTGGTA GATCTATGGG CGGGGTGGAG GTCTGGTATT TTAGATCTAA TTCTGGTGCC GCGACTACGT TACCTAGATC TACACCACGC GCACCGCCAG ATGCCATTAG ATCTACGACT GCACATGTCA GTCACCCGGT TAGATCTAGG GGGCACTTGG CGTCAACTTT TGTAGATCTA AGGTTGATAT GGCCCAGGAA TGTGCTAGAT CTAATCTAAC GCTAACCCCC CCCATCCCTA GATCTAGCGT GTGTTTGCTA TGGTTGGTGA TTAGATCTAT ATCAATTAGC TCCCCTAAGC GAATAATCCA AGCTCGACCA GGCTTGATGC TACCTGGGTT TCCATGGGGC CCTAAATGGT GGGGTACCTG GCTACTCGCG GGGTGAAAAC ACAGCGCGGC CAAACACAAC AACACCACGC CAACTCACAA ACACGAGAGC AAGAAACACA AACCACACGA GCAACAGCGA AG // ID R25_0_0000238 standard; DNA; UNC; 816 BP. XX AC R25_0_0000238 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000238 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009h03.f1; XX FH Key Location/Qualifiers FH FT source 1..816 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000238_A FT misc_binding 123..156 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000238_1" FT /note="Base quality score is 3.5516e-03" FT misc_binding 156..189 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000238_2" FT /note="Base quality score is 3.1920e-02" FT misc_binding 189..222 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000238_3" FT /note="Base quality score is 1.8178e-02" FT misc_binding 222..255 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000238_4" FT /note="Base quality score is 4.2736e-02" FT misc_binding 255..288 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000238_5" FT /note="Base quality score is 9.6561e-03" XX SQ Sequence 816 BP; 363 A; 169 C; 129 G; 155 T; 0 other; CGAGGATACG AGTGATAGTC TACGATGTCA CTATAGGGCG AATGGGCCTC TAGATCATGC CGAGCGGCGC CAGTGTGATG GATATCTGCA GAATTCCAGC ACACTGGCGG CCGTACTAGT GGATCTAGGA GTGAGGGCGG TTTTCATTAA CTTAGATCTA AAATAACATC CTACGTCCGT GACGATAGAT CTATCATAAA ACCACCCCAT GCGCACCTTA GATCTAGTTT AATCAGTGCG TGTGAACTTT TTAGATCTAC GTATGGATGC CATTCTTACT CCCATAGATC CGAGCTCGGT ACCAAGCTTG ATGCATAGCT TGAGTATTCT ATAGTGTCAC CTAAATAGCT TGGCGTAATC ATGGTCATAG CTGTTTCCTG TGTGAAAATG CCGCGAGGTA AACACGAGAC ACGAGAGAGA GGTTACCCAG AGTAAAGCGC GACAAAGAAA CCACACAAAA CAAAACAAGC AAAAAAATAA AACAAAAAAA AACAAAAAAC AAACAAAAAA AACACCCAAA AGAGCACGAA AACAAACTAC AAAACGAATA AACAACGAAA AACAAACAGC AAAACTAATA ATAAGTCAAC ATAAACTATA AATATCAAAC ATATAGAACA AAATCTAAAT AATACACATA CAATAACCAT ATCACATAAT AGAGACAAAG AGAAGTAACA AACAACACAT AACACAACAG ACAAACATAA AACAACAAAG AAACACATAC AACTTCAATA ACAACATAAA AAAAAAGAAA ATTAATAAAA TAAAAAAGAC AACACAACCA TCAACCTAAA ACTAAAAACA ACATTA // ID R25_0_0000239 standard; DNA; UNC; 246 BP. XX AC R25_0_0000239 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000239 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007a11.f1; XX FH Key Location/Qualifiers FH FT source 1..246 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000239_A XX SQ Sequence 246 BP; 56 A; 63 C; 62 G; 65 T; 0 other; CCCCCCCGCG TAACCAGGTA TGTCACGATT ACTATAGGGC GAATTGGGCC TCTAGATGCA TGCTCGACGG CGCAGTGTGA TGGATATCTG CAGAATTCCA GCACACTGGC GGCCGTTACT AGTGGATCCC GAGCTCGGTA CCAAGCTTGA TGCATAGCTT GAGTATTCTA TACGTGTCAC CCTAAATAGC TTGGCGTAAT CATGGTCATA GCTGTTTCCT GTGTGAAAAT GGCCTGACTA CTACTC // ID R25_0_0000240 standard; DNA; UNC; 785 BP. XX AC R25_0_0000240 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000240 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007b05.f1; XX FH Key Location/Qualifiers FH FT source 1..785 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000240_A FT misc_binding 115..148 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000240_1" FT /note="Base quality score is 2.7727e-02" FT misc_binding 148..181 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000240_2" FT /note="Base quality score is 1.5825e-04" FT misc_binding 181..213 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000240_3" FT /note="Base quality score is 5.6376e-04" FT misc_binding 213..246 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000240_4" FT /note="Base quality score is 7.2356e-04" FT misc_binding 246..279 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000240_5" FT /note="Base quality score is 1.6070e-03" FT misc_binding 279..312 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000240_6" FT /note="Base quality score is 1.8952e-04" FT misc_binding 312..345 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000240_7" FT /note="Base quality score is 3.9625e-04" FT misc_binding 345..378 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000240_8" FT /note="Base quality score is 1.4205e-03" FT misc_binding 378..411 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000240_9" FT /note="Base quality score is 1.2361e-03" FT misc_binding 411..444 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000240_10" FT /note="Base quality score is 5.1912e-05" FT misc_binding 444..477 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000240_11" FT /note="Base quality score is 1.7907e-02" FT misc_binding 477..510 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000240_12" FT /note="Base quality score is 9.8647e-02" FT misc_binding 510..543 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000240_13" FT /note="Base quality score is 2.0762e-02" XX SQ Sequence 785 BP; 246 A; 187 C; 175 G; 176 T; 1 other; AGTGAATGTA TACGAGTCAC TATAGGGCGA ATTGGGCCCT CTAGATGCAT GCTCAGCGGC GCCAGTGTGA TGGATATCTG CAGAATTCCA GCACACTGGC GGCGTTACTA GTGGATCTAG AGATAGTGTC GGGATTGTGA AGGATAGATC TATTAGTGTG AGGCCGACAT CTAGAGGTAG ATCTAGGGAA TGTGACCCTG TATAGGTGTT AGATCTAGAC CTATCGCGTG GACACCACGA TTTAGATCTA ACATTCGGAT TAACAGCCCC AGGCGTAGAT CTATGTGTGG GGGCCTCCAT GAATATTGTA GATCTACTCC AATGCGCATC TAGCCAAACG TTAGATCTAA GTTACAGTGC TCGTCCGTGC CACCTAGATC TACGCTAAGA TTCGTAACCA CTGGAACTAG ATCTAAGTTT CACGGAGCGA TGCAGCCATT TAGATCTATA TCGGGCACCG GAAATCGTCT CTCTAGATCT AATCGCGCCA GTGCGTACCA CCGGCATAGA TCTACTAAAT CCATGAACTA AGACATGAAT AGATCCGAGC TCGGTACCAA GCTTGATGCA TAGCTTGAGT ATTCTATAGT GTCACCTAAA TTAGCTTGGG GTAATCCTGG CCTTGCTGTC TTTGTAAAAA ACGNGGCCAA AGCAATAAAC AACACAAATC GAGACAAATA CAAACAAACG CCCCACAGGC TCACAAACAA CAAAACCATG CGACAAAACA AACACAGGCA ACGAAACCAC AAAACAACAA ACAACACAAC CTCCACAGCC AGACG // ID R25_0_0000241 standard; DNA; UNC; 750 BP. XX AC R25_0_0000241 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000241 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009h07.f1; XX FH Key Location/Qualifiers FH FT source 1..750 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000241_A FT misc_binding 181..216 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000241_1" FT /note="Base quality score is 6.7499e-02" FT misc_binding 216..249 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000241_2" FT /note="Base quality score is 3.8413e-02" FT misc_binding 249..282 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000241_3" FT /note="Base quality score is 3.2845e-02" FT misc_binding 282..315 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000241_4" FT /note="Base quality score is 7.0951e-02" FT misc_binding 315..348 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000241_5" FT /note="Base quality score is 1.8073e-02" XX SQ Sequence 750 BP; 281 A; 176 C; 140 G; 153 T; 0 other; TTGTACTCGT GTCACCTATA GGGCGCATTG GGCCCTCTAG ATGCATGCCG AGCGGTCGCA GTGTGATGGA TATCTTGCAG AATTCCAGCA CACTGGCGGC CGTTACTAGT GGATCTAGGA AGATAACGCC CCCATCCGAG CTAGATCTAC TTGTAACGGG GTGTCACACA GGTCAATCAG ATCTAACAGG TTCATTATGG GTCCTATATG GGTCGATCTA GGCTGGCATG GTCGGCATTC ATTTTTAGAT CTATACTAGC CCCGCGAAGT ACGGCACGTA GATCTATAAG TTACTTGCAG CTAGCCGGCC GTAGATCTAT TTGAGGGAGC AGTGGGCTGA GATGTAGATC CGAGCTCGGT ACCAAGCTTG ATGCATAGCT TGAGTATTCT ATAGTGTCAC CTTAAATAGC TTGGCGTAAT CATGGTCATC GCTATTTCCT GTGTGCAAAT CGCGACCAGG GGTACACCGA GTCAAGAGCG AACGGTTTCT ACCCCAGACA AGAACACGCA AAAGATTAAC ACAAACACAC AAACGACCAC ACCACTCAAC ATAACAAAAT CAAAGCACAA AAATACAAAA ACAAAACAAA ACCACAAAAA AAAAAAACAA CACAACAAAA TACACAATCC CACAACATCA ACAAAGACAA AAATCTACAT AATACAAACT CACACAACAT ACAACAAACA AAACAAACAA ACAATATAAA ACAAAAAATA ACAAGAAAAA AATACAATAA AATAATAAAC // ID R25_0_0000242 standard; DNA; UNC; 615 BP. XX AC R25_0_0000242 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000242 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007b07.f1; XX FH Key Location/Qualifiers FH FT source 1..615 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000242_A FT misc_binding 117..150 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000242_1" FT /note="Base quality score is 4.6625e-02" FT misc_binding 150..182 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000242_2" FT /note="Base quality score is 1.6944e-04" FT misc_binding 182..215 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000242_3" FT /note="Base quality score is 7.5132e-05" FT misc_binding 215..248 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000242_4" FT /note="Base quality score is 5.1034e-05" FT misc_binding 248..281 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000242_5" FT /note="Base quality score is 5.6132e-05" FT misc_binding 281..314 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000242_6" FT /note="Base quality score is 5.6387e-05" FT misc_binding 314..347 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000242_7" FT /note="Base quality score is 2.1273e-04" FT misc_binding 347..380 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000242_8" FT /note="Base quality score is 1.1602e-04" FT misc_binding 380..413 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000242_9" FT /note="Base quality score is 2.6967e-04" XX SQ Sequence 615 BP; 183 A; 138 C; 144 G; 147 T; 3 other; AGTGATGTAT ACGACTCACT ATAGGGCGAA TTGGGCCCTC TAGNATGCAT GCTCGAGCGG CGCCAGTGTG ATGGATATCT GCAGAATTCC AGCACACTGG CGGCCGTTAC TAGTGGATCT AATAGAGTAC AGGCGATTTA TTTCGCTAGA TCTAATGTAA TTCCTGCACA ACAGAAGGTA GATCTACAAT GGGGGTCTGT ACCTGCTGAA GTAGATCTAT CGGGTCACGC TACAGCAGCT ATCTTAGATC TAGTGCCCGA CCGTGCAGTT ATCTCAGTAG ATCTAGGGAA TGGCTGCTGG TGAGGACCTG TAGATCTACT TACTCCGTCC ACTCTCCCCC TCCTAGATCT AGGGATAGAA AAGGTGAAGA GAGGTGTAGA TCTAGGTTTT AGGCGCTAAG GCATGTATTT AGATCCGAGC TCGGTACCAA GCTTGATGCA TAGCTTGAGT ATTCTATAGT GTCACCTAAA TAGCTTGGCG TAATCATGGT CCTAGCTGTT TTCCGTGTGA AAGGNNTCCA ACAACAAAAA CCGCAAAACA TTAAAAGAAC AACAAATAAA CAAGCACACG CATAAACAGC CAAGACACCG ACACACACAA AAAACAACTG ACACG // ID R25_0_0000243 standard; DNA; UNC; 624 BP. XX AC R25_0_0000243 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000243 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007b12.f1; XX FH Key Location/Qualifiers FH FT source 1..624 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000243_A FT misc_binding 115..148 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000243_1" FT /note="Base quality score is 8.1769e-04" FT misc_binding 148..181 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000243_2" FT /note="Base quality score is 5.7068e-04" FT misc_binding 181..214 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000243_3" FT /note="Base quality score is 8.2548e-03" FT misc_binding 214..247 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000243_4" FT /note="Base quality score is 2.6753e-03" FT misc_binding 247..280 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000243_5" FT /note="Base quality score is 2.4426e-03" FT misc_binding 280..313 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000243_6" FT /note="Base quality score is 1.9516e-03" FT misc_binding 313..346 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000243_7" FT /note="Base quality score is 3.8575e-03" XX SQ Sequence 624 BP; 235 A; 118 C; 106 G; 164 T; 1 other; AGTGATGTAT ACGAGTCACT ATAGGGCGAA TTGGGCCCTC TAGATGCATG CTCAACGGCG CCAGTGTGAT GGATATCTGC AGAATTCCAG CACACTGGCG GCCGTTACTA GTGGATCTAG CAATCGGAAG GAATAATGGT GTATTAGATC TATCAGTTAT GCCTTAACAC ACCAGGTTAG ATCTATCGCA TGAAAAGGAC TTGGACCAGG TAGATCTAGG TAGCGTTACA CTGGCTATAA TTTTAGATCT AATTTGTACC TTGAGCTGAG TTGACACAGA TCTAAAGAAC GCACATTTCC AACAGACGTT AGATCTAGAT GTTTAAGAAG AGTCGACTTA TTTAGATCCG AGCTCGGTAC CAAGCTTGAT GCATAGCTTG AGTATTCTAT AGTGTCACCT AAATAGCTTG GCGTAATCAT GGTCATAGCT GTTTCCTGTT AAAAAAAACA AAAAAAAAAC AAACACACTC ATAACAACAT ACAAAAATAT ATACATATAC CAACCAACTC CCAAAATACA TAATATAACA ATAAAGACTA TAATAAACTA AAAACATACA GAATATTTAC TAACAACACA CTTACAAATA TAATAATACA CATATAAAAA TTAATAATAC ATAN // ID R25_0_0000244 standard; DNA; UNC; 740 BP. XX AC R25_0_0000244 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000244 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009h12.f1; XX FH Key Location/Qualifiers FH FT source 1..740 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000244_A XX SQ Sequence 740 BP; 360 A; 172 C; 122 G; 86 T; 0 other; GGGAAGCGTG TAAACTGATG AATGTCTACG ATGTCACTAT AGGGCGAATA GGGCCTCTAG ATACATAGGC AGCGGCTGCA GTGTGATAGG ATATCTGCAG AATTCCAGCA CACTGGCGGC GTAACTAGTG GATCCGAGCT CGGTACCAAG CTTGATGCAT AGCTTGAGTA TTCTATAGTG TCACCTAAAT AGCTTGGTGT AATCATGGTC ATAGCTATAT CCTGTGTGAA AAGGGCGCCA GGGACACCCC AGACACGAGC GACAAAAACA CCCAAAACAC GCAACGACAA ACATCCCACC AATCGTAACC AAAGAAAAAC ACCACACACA AAAAACGAGA ATAATAACAA CCACACCACA CACCACCACA ACAACACACA ACAACAACAG ACCCACACAA ATCACAAAGA CCAGAAGACC AAAAACAAAA CAAACGAAAC AACAAAACAA TCAAACAAAT GAGCAAGCCG AAAACCAACA GAAAGACGAA GATAAACAAC AAAAACCATC AAACACATAT CACGACACAA ACCAGAAGAA CAACAAAACA TAAGAAAAAA AACACAGAAG CACACATACA AGAAGAAAAA TAAACACAAA AGAACATGCA AAAAGAGCAC AAGAAACAAG ACAACGAGAG AACAAGCAAC ATAAGGAAAC AAAATAAAAA AAACTAACAT TAAATGAAAC ATAAAGAAAG AGCAAGATGA AAATCACAAA AAAAACGAAA AACAAGACGC // ID R25_0_0000245 standard; DNA; UNC; 791 BP. XX AC R25_0_0000245 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000245 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007c02.f1; XX FH Key Location/Qualifiers FH FT source 1..791 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000245_A FT misc_binding 141..174 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000245_1" FT /note="Base quality score is 3.6412e-04" FT misc_binding 174..207 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000245_2" FT /note="Base quality score is 3.8672e-05" FT misc_binding 207..240 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000245_3" FT /note="Base quality score is 3.2492e-04" FT misc_binding 240..273 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000245_4" FT /note="Base quality score is 1.8683e-04" FT misc_binding 273..306 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000245_5" FT /note="Base quality score is 1.5636e-04" FT misc_binding 306..339 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000245_6" FT /note="Base quality score is 4.4330e-04" FT misc_binding 339..372 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000245_7" FT /note="Base quality score is 8.3176e-05" FT misc_binding 372..405 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000245_8" FT /note="Base quality score is 2.0444e-04" FT misc_binding 405..438 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000245_9" FT /note="Base quality score is 7.4424e-04" FT misc_binding 438..470 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000245_10" FT /note="Base quality score is 3.7569e-03" XX SQ Sequence 791 BP; 219 A; 202 C; 189 G; 180 T; 1 other; TACGTGTAAC TATAGGGCGA ATTGGGCCCT CTAGAGTTAT GCTCGAGCGG CGCAGTGTGA TGGATATCTG CAGAATTCCA GCACACTGGC GGCCGTTACT AGTGGATCTA GCACTATCTC GACATACAGA AGAGATGGAG ATCTACCCGG GCGTGCTTCT CAGTTCACCG TAGATCTATT GCATCTCACC CTCATCTCCC GCTTAGATCT AGTTTATCTG CGCCATGACC TCCTTGTAGA TCTATGTTGG CGCTAGCTTA TGGGCACGAT AGATCTACTT TGCTGCCATG CGCGGAAACC ACTAGATCTA ACGCGAGACG CGTCGGGGGG ATGCCTAGAT CTATCGTAGG CCCCCGTCCT GATCGGTCTA GATCTATGGG GGACGGTTGG AGGCTTGAGG ATAGATCTAG AGAACCATCC AACCCCGCGA CATATAGATC ATTAGGGGGT CTTGCTACTG GGTGGGTAGA TCCGAGCTCG GTACCAAGCT TGATGCATAG CTTGAGTATT CTATAGTGTC ACCTAAATAG CTTGGNGTAA TCCTGGTCAT AGCTTTTCCT GTTTAAAAAG GTACGCGCAC AAATTCAACA AACTTAGATC CGGAAACTAA GGGGTAAGCT GGGTGCCAAT AATAGGCAAC CCATTAATGC GTGCCCACAG CCGCTCCATC GGAACTGCTG TGCACCCTCG GGCGAAACAC ACAAATACAG CCACACGGAC AACACAACAC ATACACACAG ACATAACAAC ACTGACAACC AAAAAGACAC TACAACGAAA AAAGACAACC A // ID R25_0_0000246 standard; DNA; UNC; 839 BP. XX AC R25_0_0000246 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000246 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x010a02.f1; XX FH Key Location/Qualifiers FH FT source 1..839 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000246_A FT misc_binding 125..158 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000246_1" FT /note="Base quality score is 2.0763e-03" FT misc_binding 158..190 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000246_2" FT /note="Base quality score is 5.3735e-03" FT misc_binding 190..223 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000246_3" FT /note="Base quality score is 8.2551e-04" FT misc_binding 223..256 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000246_4" FT /note="Base quality score is 3.1195e-04" FT misc_binding 256..289 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000246_5" FT /note="Base quality score is 1.4815e-03" FT misc_binding 289..322 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000246_6" FT /note="Base quality score is 2.6667e-03" FT misc_binding 322..355 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000246_7" FT /note="Base quality score is 2.4484e-03" FT misc_binding 355..388 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000246_8" FT /note="Base quality score is 2.2791e-02" FT misc_binding 388..421 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000246_9" FT /note="Base quality score is 5.2796e-03" FT misc_binding 421..454 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000246_10" FT /note="Base quality score is 3.5912e-02" FT misc_binding 454..487 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000246_11" FT /note="Base quality score is 2.6568e-02" FT misc_binding 487..520 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000246_12" FT /note="Base quality score is 3.1656e-02" XX SQ Sequence 839 BP; 259 A; 207 C; 181 G; 192 T; 0 other; CGGAATACGG CAGGAATGTA TAGACTCACT ATAGGGCGAA TTGGGCCCTC ATAGATGCAT GTCGAGCGGC GCCAGTGTGA TGGATATCTG CAGAATTCCA GCACACTGGC GGCGTTACTA GTGGATCTAT AGGTGGCTTT CGAAACGCAG TAGCTAGATC TAAACGCAAT ACTGTAAAGT TCAGGCTAGA TCTAGTTACT GTCTATTGCC CCTTTCATGT AGATCTACAT GTTATGTTAT TTGTGTGCAG GATAGATCTA TGCAGCCTCA CTAGCAAGGT ATTGGTAGAT CTATGTGTGG CATGGTGGAA TCCTGTCGTA GATCTACGTC CAGTACGGCA GGCGCATAGT TTAGATCTAC CCCAGGCATT CTCTGGAGCA TCAATAGATC TAATGAACTT TGCTTGAGCC CCGCCTGTAG ATCTAGTTAC TCCAGTACTC GGGCTGCCGA TAGATCTAGC TCGGTTGACG TACATCAGGT TGTTAGATCT AAAACAAAGT CGAGTTACGT TACCACTAGA TCCGAGCTCG GTACCAAGCT TGATGCATAG CTTGAGTATT CTATAGTGTC ACCTAAATAG CTTGGCGTAA TCCTGGGCTA GCTTTTTCTC TTGGTAACAC CCGGGATCCC GAGCACGACA GAAGAACAAA AGTAAGACCA GAGGAACAAA TAAGAACACG ACATCCACGG AAACAAAAAT AAACCACAAG AAACAACAAA ACGACAGCAA AAACATGACA CAGCACAACG CCGTCGCAAG CCAAACATAA CACACACCCA CTACATAAAC AACACCGTCC TCCATGCAAC ACAACCACAC ACACACCAAC AACCACCCG // ID R25_0_0000247 standard; DNA; UNC; 842 BP. XX AC R25_0_0000247 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000247 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x010a03.f1; XX FH Key Location/Qualifiers FH FT source 1..842 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000247_A FT misc_binding 132..165 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000247_1" FT /note="Base quality score is 5.8470e-03" FT misc_binding 165..198 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000247_2" FT /note="Base quality score is 2.6562e-03" FT misc_binding 198..231 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000247_3" FT /note="Base quality score is 6.5737e-03" FT misc_binding 231..264 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000247_4" FT /note="Base quality score is 1.4144e-02" FT misc_binding 264..297 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000247_5" FT /note="Base quality score is 2.7911e-03" XX SQ Sequence 842 BP; 260 A; 246 C; 158 G; 178 T; 0 other; GAGAGTGATA GAGGCAGTGA ATGTATACGA CTCACTATAG GGCGAATTGG GCCCTCTAGA TGCATGCTCG AGCGGACGCA GTGTGATGGA TATCTGCAGA ATTCCAGCAC ACTGGCGGCC GTTACTAGTG GATCTAGGAA ATATTATATT TCTGGTTTGT ATAGATCTAG ATTGCTCCCA CAAAAACGTA CCAGTAGATC TACGAAGGAC CCGCCCCACG CGTAGGCTAG ATCTAGGAGT AAAGCTCGGC CCAATTATGT TAGATCTAAC ATTTGGACAC GGCACCGGTA GTATAGATCC GAGCTCGGTA CCAAGCTTGA TGCATAGCTT GAGTATTCTA TAGTGTCACC TAAATAGCTT GGCGTAATCA TGGTCATAGC TGTTTCCTGT GTGAAAATGT CCGAGGAGTG TCCTCGCCAC GCAGCGACGG GCATTGTGCC TCAGCCTGAC CGACCCCGCA CCCTGAACAC ACAAGAAGAA CCGGACCCCC ACCCCCATCA GCCACCCACC CCCACAACTC AACCACCTCA ACTACACCAT CCTCTATCCT CGTAATCGAC ACACATCACA CCTGACTGCA GACAACGAGA AGCCGTAATC AAGACATAAA AATAAAGTAT ATATCACCAT CCAATCAATC AACAAGAAAT AACAATACTA ATAAGACAAA ACAGCATCTT GCGTTAAACA TTCACTATAA TCATCACCGC TCACGGCCAT CATATTGTAG AACACTTCTC CAGCATACTT GCGACAACAT GAACAGCAAT GTCACACCAC TAACATATAC CACCGACTCC AACCCCACCC CAACATCCTC CGCACGCCCG CCACCCGATA TA // ID R25_0_0000248 standard; DNA; UNC; 767 BP. XX AC R25_0_0000248 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000248 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x010a04.f1; XX FH Key Location/Qualifiers FH FT source 1..767 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000248_A FT misc_binding 131..164 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000248_1" FT /note="Base quality score is 1.6795e-02" FT misc_binding 164..197 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000248_2" FT /note="Base quality score is 5.1263e-03" FT misc_binding 197..229 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000248_3" FT /note="Base quality score is 5.6651e-04" FT misc_binding 229..262 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000248_4" FT /note="Base quality score is 1.4018e-03" FT misc_binding 262..295 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000248_5" FT /note="Base quality score is 5.4720e-03" FT misc_binding 295..328 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000248_6" FT /note="Base quality score is 1.3396e-03" FT misc_binding 328..361 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000248_7" FT /note="Base quality score is 8.5413e-04" XX SQ Sequence 767 BP; 232 A; 234 C; 149 G; 152 T; 0 other; CGGTGGATGA AGAGGCAGTG ATGTATACGA CTCACTATAG GGCGAATAGG GCCCTCTAGA TGCATGCTCG AGCGGCGCCA GTGTGATGGA TATCTGCAGA ATTCCAGCAC ACTGGCGGCG TTACTAGTGG ATCTATATCA GTGGGAATTC ATGGGCTCTG TAGATCTATT TCACAGTCGG GGGGAAAGAG TGTTAGATCT AAGGGTTGCG GCACATTATT CAAGCTAGAT CTAGGCGGGC CCATCCTCGT GTCGAAGCTA GATCTATCAT GAGGGCCCGT GGTGTGATAC CTAGATCTAT GCCTGCTGCG GATCATACCA TCGTTAGATC TACTGTTTAA GTACCACATT CGGCGCATAG ATCCGAGCTC GGTACCAAGC TTGATGCATA GCTTGAGTAT TCTATAGTGT CACCTAAATA GCTTGGCGTA ATCATGGTCA TAGCTGTTTC CTGTGTGAAA AGGCCAGAAG GATCCCCCCC GTCACGGGCG CCAGCCACCC ACAGTGACGC CCCAACATCA CCACTCACCA CACCCCCCGC ACCACACCAA TCCTCACCTG TCTCATACAC CGCCCAACCA ACAAACACCA CCCAACAACC ACCCACATAC ACAACAACAA CCCAACAACA CAAAAAACAC CCACACCCAA CACACCACAC ACACAACACA CATAGCACAT TAGATACACA CTCTCTCACT CTACACATAG ACGATAACAT ACAACACTAA CACCAACAAA CAAACAACAC TAACAACCAC CATCCCG // ID R25_0_0000249 standard; DNA; UNC; 856 BP. XX AC R25_0_0000249 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000249 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007c09.f1; XX FH Key Location/Qualifiers FH FT source 1..856 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000249_A FT misc_binding 131..164 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000249_1" FT /note="Base quality score is 1.7192e-03" FT misc_binding 164..197 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000249_2" FT /note="Base quality score is 1.5200e-02" FT misc_binding 197..230 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000249_3" FT /note="Base quality score is 4.1647e-03" FT misc_binding 230..263 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000249_4" FT /note="Base quality score is 3.0332e-03" FT misc_binding 263..296 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000249_5" FT /note="Base quality score is 2.4801e-03" FT misc_binding 296..329 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000249_6" FT /note="Base quality score is 3.4775e-02" FT misc_binding 329..362 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000249_7" FT /note="Base quality score is 7.5331e-03" FT misc_binding 362..395 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000249_8" FT /note="Base quality score is 1.1773e-02" FT misc_binding 395..428 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000249_9" FT /note="Base quality score is 6.8584e-03" XX SQ Sequence 856 BP; 273 A; 237 C; 193 G; 152 T; 1 other; TGTCAAACAC GCAGGAATGT AAACGATTCA CATATAGGGC GAATTGGGCC CTCTAGATGC ATGCTCGAGC GGCGCCAGTG TGATAGGATA TCTAGCAGAA TTCCAGCACA CTGGCGGCCG TTACTAGTGG ATCTACTTCT AAACTCCAAA CAACTCATGC TAGATCTAGA ATCGAGACCG TTTTGCGACT ACGTAGATCT ACCCTATCTT TGGTGGATCC TACACATAGA TCTATCCGGA GAGTGCGGGC GGTAGTAAGT AGATCTAGGG GGCTGGGCAA CTAGGGGGGA GGTAGATCTA CTGGCTTCCG ATCTCCATGC ATGTATAGAT CTATGAACAG AGGGGGGCTT GTGCAAGCTA GATCTATCCC TGATCCATCA TATCTAGCCG CTAGATCTAC CTGTCATCTA GTATTACGTA TCGTTAGATC CGAGCTCGGT ACCAAGCTTG ATGCATAGCT TGAGTATTCT ATAGTGTCAC CTAAATAGCT TGGCGTACTC CTGGTCATAG CTGTTTCCTG TTGAAAACNA CCACCACACC ACACCACCCA CAACCACACA CAACCACACC CACACCACCA CACACACACC ACACAAACAC AACACAACAC ACAACAAACA CATCTACGAC GAGTCGACAA CAGCGACGAA GGAGAACAGA GAAGCAAGGC AGCTGCAGCG CGAAAGGAGC GCGAAGCCCA CAGACGACAA ACCACCGCAC ACCGCGAGAT CAGGAGAACA CTGCTACAGA CACCACCAGA CAAAAGAGCT AAGCAGAAAT GAGGAAGAGA GCAGACAACA AGAGCGACGC AGCCATGCCA CGACGCAAGA CGACACCAGC GAACAACCCA CGACAA // ID R25_0_0000250 standard; DNA; UNC; 921 BP. XX AC R25_0_0000250 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000250 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x010a08.f1; XX FH Key Location/Qualifiers FH FT source 1..921 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000250_A XX SQ Sequence 921 BP; 454 A; 241 C; 95 G; 127 T; 4 other; AACGAATAAA GGGCAGGAAT GTATACGACT CACTATAGGG CGCATTGGGC CTCTAGATGC ATGTCGAGCG GCGCCAGTGT GATGGATATC TGCAGAATTC CAGCACACTG GCGGCCGTTA CTAGTGCGAG CTCGGTACCA AGCTTGATGC ATAGCTTGAG TATTCTATAG TGTCACCTAA ATAGCTTGGC GTAATCATGG TCATAGCTGT TTCCTGTGTG AAAAGGCCGC CAGGTTTCCC CCAATCAAGA GCGCGAGGAA ACACAAAAAA AAAACAGAAC TAAAAAAAAC AAACAACAAA ACCCACACAC CAACACCAAA CCAAAAACAA AATCAAATCA TAACAAAAAA AAAAAAAATA AATACAACCA CAAATAAACA CAAACACCAC AAACAAAAAA CAAGAATAAA ACACAACAAT AAAACCGACT ACGACACAAT ACAAATAAAC ATATACCAAA GAAAAGAACA AAAACACAAA AAACACTAAC ACACTACAAA AAACAACCAC CACCTAGCAC AACAAACAAC CACCACACTA ATACACTCCA TAAAAAAAAT AAAAACAACA AAAATACAAA GAAAATAGAA GCTCAACCTT CACCATGAAC ATCAATACAA AATAAAAAAC AACTCCACCT ACTAACACGA ACTACACACC AATATACATA ACAGAAACAA CAACAACACA ACACATATAC AACATACAAT AACACAAATA CAAAAAACCA AATAAACTTC CATAATGAAC ACAACGAAAA TACAAACCAA AACAACAACA ACAACACAAG AGAACCGAAA TCCTACTACT GAGCAGTACA CAACAACCTT ATACCACACT ACAACAAAAA GCAAACAACT AATAACTCAA CGCACACACA ACAACACCAC AACAACTATC ACTCACCTAN NACNCANACC C // ID R25_0_0000251 standard; DNA; UNC; 244 BP. XX AC R25_0_0000251 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000251 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007c12.f1; XX FH Key Location/Qualifiers FH FT source 1..244 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000251_A XX SQ Sequence 244 BP; 70 A; 55 C; 55 G; 63 T; 1 other; TAGGTGGAAT TGGGCCCTCT CAGGATANTG CTCGAGCGGC GCCAGTGTGA TGGATATCTG CAGAATTCCA GCACACTGGC GGCGTTACTA GTGGATCCGA GCTCGGTACC AAGCTTGATG CATAGCTTGA GTATTCTAGT GTCACCTAAA TAGCTTGGCG TAATCATGGT CATAGCTGTT TCCTGTGTGA AAAGATAATC CCAAATCTTA CCCCATATAT AACAAAAAAC ACCTCATCAA AAAA // ID R25_0_0000252 standard; DNA; UNC; 784 BP. XX AC R25_0_0000252 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000252 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007d01.f1; XX FH Key Location/Qualifiers FH FT source 1..784 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000252_A FT misc_binding 128..161 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000252_1" FT /note="Base quality score is 3.8439e-02" FT misc_binding 161..194 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000252_2" FT /note="Base quality score is 5.0565e-03" FT misc_binding 194..227 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000252_3" FT /note="Base quality score is 1.3641e-03" FT misc_binding 227..260 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000252_4" FT /note="Base quality score is 1.8770e-03" FT misc_binding 260..293 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000252_5" FT /note="Base quality score is 5.6822e-04" FT misc_binding 293..326 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000252_6" FT /note="Base quality score is 1.3084e-02" XX SQ Sequence 784 BP; 297 A; 176 C; 164 G; 146 T; 1 other; GAAGTTTAAA AAACGAGGAT GCATAGTGTC ACTATAGGGC GAATTGGGCC CTCTAGATGC ATGCTCGACG GCGCCAGTGT GATGGATATC TGCAGAATTC CAGCACACTG GCGGCCGTTA CTAGTGGATC TAATATAGAA GCTAGGGAAA AATTTTTTAG ATCTAGCTGG CGATAGACTA TATGTTTAAT TAGATCTAGG GGGGTGGAAT GTCCTCAATG AGGTAGATCT ACTTGCTCAA TTTTGGATCG TGATCATAGA TCTAGTCAAC AGGTCTGACG CGACCTCTGT AGATCTAGTC TCGGTTAATT TAGCTGCCTT GTTAGATCCG AGCTCGGTAC CAAGCTTGAT GCATAGCTTG AGTATTCTAT AGTGTCACCT AAATAGCTTG GCGTAATCAT GGTCATAGCT GTTTCCCTGG TGGTAAACGG NCAATACACA ACAACTAACA CTAACCACCA CATAACAGCA CAAAGAGAAC AGAAGAAGAC CACCAGCACA ATAACACCAG CAAGCACACC AAGACAATAC AGCACAGATA ACCACCACAA CAAAGCAACA CTAACCAGCA CCAACAAAAA CCAACCACAA GAACATACCA GATATAAAAA GAAAAAAGAG GCGACACAAA AAAAACACAT CAAACACAAC AAGAGGACAA AAAGACGATA AAAAACACAA GGGAGCGGAT GTAATAATCA CGAAGAAGGA GACAAAGACG AAGAGAGCAA CAAAACGCGC ACTGCGACCA CCGCCAAAAC AGCAAACTAA CAACCACGAG AGCG // ID R25_0_0000253 standard; DNA; UNC; 791 BP. XX AC R25_0_0000253 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000253 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x010a10.f1; XX FH Key Location/Qualifiers FH FT source 1..791 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000253_A FT misc_binding 138..171 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000253_1" FT /note="Base quality score is 1.6933e-03" FT misc_binding 171..204 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000253_2" FT /note="Base quality score is 1.5036e-04" FT misc_binding 204..237 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000253_3" FT /note="Base quality score is 1.6857e-03" FT misc_binding 237..270 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000253_4" FT /note="Base quality score is 2.0602e-03" FT misc_binding 270..303 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000253_5" FT /note="Base quality score is 4.4458e-04" FT misc_binding 303..336 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000253_6" FT /note="Base quality score is 4.8632e-04" FT misc_binding 336..369 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000253_7" FT /note="Base quality score is 2.2660e-03" FT misc_binding 369..402 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000253_8" FT /note="Base quality score is 1.3899e-03" XX SQ Sequence 791 BP; 282 A; 201 C; 146 G; 162 T; 0 other; TTGGGGAGCA GCGTGTATAA CGCAGTGATT GTATACGATC ACTATAGGGC GAATTGGGCC TCTAGATGCA TGCTCGAGCG GCGCCAGTGT GATGGATATC TGCAGAATTC CAGCACACTG GCGGCCGTTA CTAGTGGATC TAATTGGTTA GATTTAGGGG ATGTTCGTAG ATCTACAGCC TCCAGTCCAA GCAACCGAGC TAGATCTAGT AAATCAAAAA AGGGGGGGCT TCGTAGATCT AAGGGCTAGA ATGAGCTGGA AGTAGGTAGA TCTAACACCC ACACTACAAA CACCACACCT AGATCTACGG CAGACTAAAT TTGTCGATGA ACTAGATCTA GTACAGCCGG CATGTTAATA TGCGGTAGAT CTAAGTGTAG GATGTGCCTC GTTTTGGATA GATCCGAGCT CGGTACCAAG CTTGATGCAT AGCTTGAGTA TTCTATAGTG TCACCTAAAT AGCTTGGCGT AATCATGGTC ATAGCTGTTT CCTGTGTGAC AGCGCCCCAC AGCCAACCAA CCACAAAACC ACCCAAAAAC AAACACACAA CAAAACAGCA AGACAACCAC CTCCAACACT CACAAACAAC TAAAACAAAC ATCATACAAA GAACACACAC GAGACAATCC AGCACAAACA AAAAACATCA AACACACTTA ATCGACACAC AACTGTAGCT TACACCTGAC CCATACACCA CTAAAAACTA TCCTAACTTA CCAACAAAAA AAACAAACTA CGTTAAAACA ACAAAACAAC ACTCACATAA CCTATAACAC AAACCCCTTC C // ID R25_0_0000254 standard; DNA; UNC; 789 BP. XX AC R25_0_0000254 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000254 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007d05.f1; XX FH Key Location/Qualifiers FH FT source 1..789 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000254_A FT misc_binding 117..150 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000254_1" FT /note="Base quality score is 2.8214e-04" FT misc_binding 150..183 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000254_2" FT /note="Base quality score is 1.1098e-03" FT misc_binding 183..216 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000254_3" FT /note="Base quality score is 4.1924e-03" FT misc_binding 216..249 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000254_4" FT /note="Base quality score is 4.3091e-03" FT misc_binding 249..282 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000254_5" FT /note="Base quality score is 4.9422e-03" FT misc_binding 282..315 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000254_6" FT /note="Base quality score is 5.5239e-04" FT misc_binding 315..348 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000254_7" FT /note="Base quality score is 2.8416e-03" FT misc_binding 348..381 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000254_8" FT /note="Base quality score is 8.4149e-04" FT misc_binding 381..414 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000254_9" FT /note="Base quality score is 1.9618e-04" FT misc_binding 414..447 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000254_10" FT /note="Base quality score is 2.7942e-04" FT misc_binding 447..479 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000254_11" FT /note="Base quality score is 4.5924e-03" FT misc_binding 479..512 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000254_12" FT /note="Base quality score is 1.8891e-02" FT misc_binding 512..545 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000254_13" FT /note="Base quality score is 6.7514e-03" FT misc_binding 545..578 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000254_14" FT /note="Base quality score is 5.5866e-02" FT misc_binding 578..611 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000254_15" FT /note="Base quality score is 9.9329e-02" FT misc_binding 611..644 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000254_16" FT /note="Base quality score is 1.5967e-01" FT misc_binding 644..677 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000254_17" FT /note="Base quality score is 1.7643e-01" FT misc_binding 677..710 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000254_18" FT /note="Base quality score is 1.9354e-01" XX SQ Sequence 789 BP; 197 A; 154 C; 213 G; 225 T; 0 other; AATGATGTAT ACGACTCACT ATAGGGCGAA TTGGGCCCTC TCAGATGCAT GCTCGAGCGG CGCCAGTGTG ATGGATATCT GCAGAATTCC AGCACACTGG CGGCCGTTAC TAGTGGATCT ATCGACAGCA CTATTAACCA TTGTATTAGA TCTAGTTGTG TCTTAGTCGT TTTGTGAGTT AGATCTAGTT GGGCTCACGC CATAAGGTTT TGTAGATCTA GGGACGGCCC CGTATCTTTA CAGCATAGAT CTATGCACGG GACGGGCGGC CATTGGTGTA GATCTAGTTT CTTCACAAGC CACAACGGAT CTAGATCTAG TGGGTATTAT GTGCGTGGGA AGGTTAGATC TAGTTTTGGT TTAGATTTGA CTCCGAATAG ATCTATTATT ATGAAATCCA CCCTCCCTCA TAGATCTACG CACTGAATAT ACACCCCAAA GGTTAGATCT ATGGTGGCAG CCAGGATAGT GATGCTAGAT CTATCGGGAA AGCGTTGTGA GTGAGGTTTA GATCTAGCGT TCAGCGAGAG ATTTGTCAAA TTAGATCTAG TAGAGTTACA CTGGGTCGAC GATTTAGATC TAAGCTGGTT GGAGTGGGAG GGAGGGGTAG ATCTAAGCAG CACTGTTCCG AAAGAACGGG TATATCTAGA GACACACCCC TTAAGCTAGG CCATAGATCT ATATGGGTCG GGCCTATTGT GTGGGGCAGA TCCGAGCTCG GTCACAAGCT TGTAGCATAG ATTGGGGTTC TCATAGTGTC ACTTAATAGT TGGTACTGCT CATCTCGCG // ID R25_0_0000255 standard; DNA; UNC; 675 BP. XX AC R25_0_0000255 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000255 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x010a12.f1; XX FH Key Location/Qualifiers FH FT source 1..675 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000255_A FT misc_binding 121..155 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000255_1" FT /note="Base quality score is 1.5164e-01" FT misc_binding 155..189 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000255_2" FT /note="Base quality score is 1.4124e-01" FT misc_binding 189..223 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000255_3" FT /note="Base quality score is 6.1332e-02" FT misc_binding 223..256 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000255_4" FT /note="Base quality score is 1.0748e-01" XX SQ Sequence 675 BP; 237 A; 156 C; 130 G; 152 T; 0 other; ATCCTTGATG TATACGATTC ACTATAGGGC GAATAGGGCC CTCTAGATAC ATAGCTCAGC GGTCGCCAGT GTAGATGGAT ATCAGCAGAA TATCCAGCAC ACTGGCGGCC GAACTAGTGG ATCTATAGTG TACGCACTGA ATATAGAGTA TAAGATCTAG AACTCAGACA AGCGAATATC ATTGTAAGAT ACTAATTGAG TTCGGTGCCT GCTAGAGTAT AGATCTACCA AGCTCGTCTT CCCTCCACAA TATAGATCTA ATAACTAGAA TCGTGTCACG GCGCTAATAA GATACTATGG AGGGTGTTAG TATAAAGCCC AAGATAAGCT CTATAACCGC GACACCACAT CCTCCTGTAA GATCTAATGG CGCCCGACAC CGACATCTGA GGTAAATCTA AATAAACAGA AAAACTACCA ATCCCTAAGA TCTATACCAA TACTTAAAAT ACGACTGAAA TAGATCTAGG AGTAGGGCTC GGTAATATAA CCAAGATCCG ACTCGGTACC CAGCTTGATA GCAAGCTTGA GTATACTCTA AGTGTCCCCA AAATAGCTTG GCCGTAATCT TCGTCCTAAG CTTTTGACCC GTGTAAAAAG CCCGGCGGGT TCCACACGCA ACAAAACCAC GGATTAACAC AAAAAACAAA GCCCATAAAA AAAAAAAACA CAAAA // ID R25_0_0000256 standard; DNA; UNC; 771 BP. XX AC R25_0_0000256 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000256 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007d10.f1; XX FH Key Location/Qualifiers FH FT source 1..771 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000256_A FT misc_binding 131..164 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000256_1" FT /note="Base quality score is 1.2942e-04" FT misc_binding 164..196 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000256_2" FT /note="Base quality score is 3.5559e-04" FT misc_binding 196..229 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000256_3" FT /note="Base quality score is 8.8964e-05" FT misc_binding 229..261 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000256_4" FT /note="Base quality score is 4.4181e-03" FT misc_binding 261..294 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000256_5" FT /note="Base quality score is 1.4503e-04" FT misc_binding 294..327 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000256_6" FT /note="Base quality score is 4.0998e-04" XX SQ Sequence 771 BP; 230 A; 235 C; 167 G; 138 T; 1 other; CCCGCGGTGA ACAAGCAGTG AATGTATAGA TCACTATAGG GCGAATTGGG CCCTCTANGA TGCATGCTCG AGCGGCGCCA GTGTGATGGA TATCTGCAGA ATTCCAGCAC ACTGGCGGCG TTACTAGTGG ATCTAGGATG GAATTAATGG CTGCAGTTTG TAGATCTACA ACCCAAGATT TCCAGCTTGG CTTAGATCTA CAAACCTCCT GCAGACTTCC TAGAATAGAT CTTCCGGAGG GTGCATCATA TAATATCTAG ATCTAGGTCA TCGGTCTGCA TGGGGTGGGG TAGATCTAAG TATACGCCAA CTACCTTCCT TCCTAGATCC GAGCTCGGTA CCAAGCTTGA TGCATAGCTT GAGTATTCTA TAGTGTCACC TAAATAGCTT GGCGTAATCA TGGTCATAGC TGTTTCCTGG TGGAAAAAGG CTACGCGCGG TCGACACCAC CCCACGACAC TCCGACGTAC CACCAACATC CCCCAGAACA ACCCGCCGCG CCACCCCCAC CAGACGCCCG GCCGCCGCGA CCCCACACCC CCCCGGAGGC GACCGCCCAC ACACCACCCC GCACACGACA CACCCTCAGA CACGAGGAAA AAAAACACAC GAACAAGAAG AATAAGAAAA AAAACCACAA GCCAAAGCAG AGGGCCAAAC CTCTGCCGCC TGCGAGAGAA ACAGAACACA AATAATAGTA CAACCACGGA AGTACGCCAC AACTACCCTG CGCTATCCCT AACACCACAG TCGTCGAATA CCAAAACACA C // ID R25_0_0000257 standard; DNA; UNC; 837 BP. XX AC R25_0_0000257 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000257 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007e01.f1; XX FH Key Location/Qualifiers FH FT source 1..837 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000257_A FT misc_binding 121..154 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000257_1" FT /note="Base quality score is 5.1325e-04" FT misc_binding 154..187 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000257_2" FT /note="Base quality score is 1.4925e-03" FT misc_binding 187..220 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000257_3" FT /note="Base quality score is 4.3840e-04" FT misc_binding 220..253 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000257_4" FT /note="Base quality score is 2.2651e-04" FT misc_binding 253..286 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000257_5" FT /note="Base quality score is 2.0858e-04" FT misc_binding 286..319 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000257_6" FT /note="Base quality score is 2.9295e-04" FT misc_binding 319..352 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000257_7" FT /note="Base quality score is 1.4816e-03" FT misc_binding 352..385 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000257_8" FT /note="Base quality score is 5.8805e-04" XX SQ Sequence 837 BP; 282 A; 202 C; 191 G; 159 T; 3 other; AAAACACGCA GGATGCCATA CGGTGTACTA TAGGCGAATT GGCCCTCTAG ATGCATGCTC GAGCGGCGCA GTGTGATGGA TATCTGCAGA ATTCCAGCAC ACTGGCGGCG TTACTAGTGG ATCTAGGTGG CATTTTCCTC TCTATGTGTT TAGATCTATC AAGGCCAAAA TTTGGCCCTA CTCTAGATCT AGTTCCGAAG CATCCGACCT GGGTTTTAGA TCTAACCTAG TGCCCCCCTT TACCCCTTCT AGATCTAATC CGATAGATCG CTACTCGAAA CCTAGATCTA ATGGATATGT ATTGGTGGTC GTGTATAGAT CTAAGTGGTG CAACGTAGGC TAACTGCATA GATCTAGAGC GCATTGGGGG TGTATTCTTA TTAGATCCGA GCTCGGTACC AAGCTTGATG CATAGCTTGA GTATTCTATA GTGTCACCTA AATAGCTTGG CGTAATCCTG GTCATAGCTG TTTCCCTGGG TAGAAAGGNN NCGCCAACAA AAAGCCACAG AGCATCACAG GAAAAAGAGA AAAACACACA CCACCAAACA AAGAAAAACC GAGAACAACA CAAAAAAAAA ACGCGACAGA GCCATGAAAA TAGAGGGACA AGAGCAATCA CAGAAAGACA AGTACAGCAA GACACACCAA TAAACGAACA GACAGGGGAG CGGGAGCACA AAAGCGGAAC AGACGAGAGC CGCAACGCAC GAGACAGCAC TACATGAGAA GGTGTAACAC AGAGACGACA GACAACACGG AGAGCAGTAG CCACCCACAA CACACCTCAC TACGCTCAGA ACTATCCGAA CAGCAGAAGT ACAACACCCA CACAGCA // ID R25_0_0000258 standard; DNA; UNC; 879 BP. XX AC R25_0_0000258 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000258 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007e02.f1; XX FH Key Location/Qualifiers FH FT source 1..879 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000258_A FT misc_binding 90..122 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000258_1" FT /note="Base quality score is 1.3429e-02" FT misc_binding 122..155 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000258_2" FT /note="Base quality score is 2.5092e-02" FT misc_binding 155..188 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000258_3" FT /note="Base quality score is 9.6035e-04" FT misc_binding 188..221 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000258_4" FT /note="Base quality score is 2.8589e-02" FT misc_binding 221..254 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000258_5" FT /note="Base quality score is 9.0829e-03" FT misc_binding 254..287 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000258_6" FT /note="Base quality score is 5.7209e-02" FT misc_binding 287..320 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000258_7" FT /note="Base quality score is 5.2953e-02" FT misc_binding 320..353 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000258_8" FT /note="Base quality score is 1.3009e-01" XX SQ Sequence 879 BP; 319 A; 254 C; 118 G; 186 T; 2 other; TAGGGCGAAT TGGGCCTCTA GAGTATGCTC GAGCGCGCAG TGTGATGGAT ATCTGCAGAA TTCCAGCACA CTGGCGGCGT TACTAGTGGA TCTATACATC ACTGTCGTGT CCCGTACCCA GATCTATAAT ACCAGACCTA CCCCTCACAC CTAGATCTAG TTAAAACAAG ATTCGCCCGA ACATTAGATC TATTCACTAA TTGGAGGCAC CACGCGGTAG ATCTAGTAGC GGATTTATCG CACGGATTGG TAGATCTAGC CCAGAATGGC CAGCACGAAG TCATAGATCT ATTTAAAAGC ATCACAAGCC AGACTGTAGA TCTACCCCAG TCCTCCCTGC GCCACCAACT AGATACGAGC TCGGTACCCA GCTTGATGCA TAGCTAGAGT ATTCTATAGT GTCACCTAAA TAGCTTGGGG TATCATGGTC ATAGCTCTTT CCTGTGTGAC AAACGCTCAC AGGGTTCACC AATACCACAC AACTATAGGA ACCTGCACAC CATAACGCAC TCAACCCATG TACTCACCAA TATACAATCA CAAAACACAC ACATCATTAG CAATTGTCCA CCACTGACCA GCATTTCCAA TCCGAACACT ACATATAATA CATTGACAAA CCATGACCAA CATACATAAA AAACCATCAA AACAATCAAC ACAACAAACA CATACTAATC ACCACACAAA TAACTAAACA ACACAAACAT AAAAACTACA CACATCAAAA ACAACCTACA ACACTAAAAA TCACTAAACA ACAAAACTAA TCAACAACAA ACCAAACAAT ACAAATACAC ACCACACCAT CCATTCATCT TTCTCTCCCT TTCTCTTACA TTNNGACCCA ATCAAACAAC CCACTCACTA GACCACAAA // ID R25_0_0000259 standard; DNA; UNC; 586 BP. XX AC R25_0_0000259 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000259 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007e05.f1; XX FH Key Location/Qualifiers FH FT source 1..586 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000259_A FT misc_binding 125..158 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000259_1" FT /note="Base quality score is 7.1257e-03" FT misc_binding 158..191 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000259_2" FT /note="Base quality score is 1.3360e-03" FT misc_binding 191..224 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000259_3" FT /note="Base quality score is 3.8652e-05" FT misc_binding 224..257 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000259_4" FT /note="Base quality score is 7.3456e-05" FT misc_binding 257..290 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000259_5" FT /note="Base quality score is 2.9764e-04" FT misc_binding 290..323 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000259_6" FT /note="Base quality score is 1.4161e-04" FT misc_binding 323..356 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000259_7" FT /note="Base quality score is 1.8489e-03" FT misc_binding 356..389 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000259_8" FT /note="Base quality score is 6.4426e-03" FT misc_binding 389..422 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000259_9" FT /note="Base quality score is 1.2368e-02" XX SQ Sequence 586 BP; 186 A; 139 C; 121 G; 140 T; 0 other; GTGGAACACG CAGTTGATCG ATACTGTCAC TATAGGGCGA ATGGGCCCTC TAGATGCATG CCGAGCGGCG CCAGTGTGAT GGATATCTGC AGAATTCCAG CACACTGGCG GCCGTTACTA GTGGATCTAC TAGTTCCCAA CAAGTGTATG TTGCTAGATC TAATGATAAG ATCCAATTAC AGGGGCGTAG ATCTAAGAGA GCTGCTACTC CGTTCGCGCA TAGATCTACC CGGGCTATTT ACAAGTTTGC ATCTAGATCT AATCTCTAGG GCCCTTCCGT GGCCCGTAGA TCTACTTGGC ACAAGCACGA GGGACTGGAT AGATCTATAT TCACAAATCG TGACGGAGTC GCTAGATCTA TAAACCCTTC CAACCCCCAC CTTCCTAGAT CTACTAGCAA TTCCATCCTC GCTTAATATA GATCCGAGCT CGGTACCAAG CTTGATGCAT AGCTTGAGTA TTCTATAGTG TCACCTAAAT AGCTTGGCGT AATCATGGTC ATAGCTTTTT CCTGGTAAAA ACCAAACCCA AAAAAAAAAA AAAAAAAAAA AACAAAAACA AACAAAAGAA AGACCAACAG AAGAAA // ID R25_0_0000260 standard; DNA; UNC; 428 BP. XX AC R25_0_0000260 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000260 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007e07.f1; XX FH Key Location/Qualifiers FH FT source 1..428 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000260_A FT misc_binding 144..177 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000260_1" FT /note="Base quality score is 3.7471e-04" FT misc_binding 177..210 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000260_2" FT /note="Base quality score is 2.5919e-04" FT misc_binding 210..243 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000260_3" FT /note="Base quality score is 1.5083e-03" FT misc_binding 243..276 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000260_4" FT /note="Base quality score is 1.2707e-03" XX SQ Sequence 428 BP; 117 A; 86 C; 107 G; 116 T; 2 other; AAGTGCACGC AGTAATGTAT ACGAATCACT ATAGGGCGAA TTGGGCCCTC TAGATGCATG TCGAGCGGCG CAGTGTGATG GATATCTGCA GAATTCCAGC ACACTGGCGG CCGTTACTAG TAATTAACGG AGTCGGTTAG GAGATCTAAA CTACTCTACC ACTCTAAACT CCCTAGATCT AGAGCTGGGG GAGGTTGTTT TCGTTTTAGA TCTAAGTTTT GGCGTGCAAG GGAATCCAGT AGATCTACGG GGGCACCAGC CCATGGCGTT TTTAGATCTA GTCCGATTAC GAGAGTTGTT ACCCTAGATC CGAGCTCGGT ACCAAGCTTG ATGCATAGCT TGAGTATTCT ATAGTGTCAC CTAAATAGCT TGGCGTAATC ATGGTCATAG CTGTTTCCTG TGTTGAAAAG NNATCAAAAA AAAAAAAA // ID R25_0_0000261 standard; DNA; UNC; 595 BP. XX AC R25_0_0000261 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000261 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007f01.f1; XX FH Key Location/Qualifiers FH FT source 1..595 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000261_A FT misc_binding 123..156 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000261_1" FT /note="Base quality score is 5.1194e-04" FT misc_binding 156..189 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000261_2" FT /note="Base quality score is 3.5526e-03" FT misc_binding 189..222 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000261_3" FT /note="Base quality score is 2.2252e-03" FT misc_binding 222..255 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000261_4" FT /note="Base quality score is 1.8856e-04" FT misc_binding 255..288 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000261_5" FT /note="Base quality score is 1.1040e-03" FT misc_binding 288..321 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000261_6" FT /note="Base quality score is 4.2363e-03" FT misc_binding 321..354 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000261_7" FT /note="Base quality score is 3.1984e-04" FT misc_binding 354..387 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000261_8" FT /note="Base quality score is 2.6582e-04" XX SQ Sequence 595 BP; 179 A; 151 C; 120 G; 144 T; 1 other; TCTGAAACAC AGTGATGTAT AGATTCACTA TAGGGCGATT GGGCCCTCTA GATGCATGCT CGAGCGGCGC AGTGTGATGG ATATCTGCAG AATTCCAGCA CACTGGCGGC GTTACTAGTG AGATCTAGTC GCGCAGTAGT CGGTGAGGCT AGTAGATCTA TCCCCTCGCA CCTATCCCGT CCTCCTAGAT CTACTGCTAC TTGTGCCGCG AAATATACTA GATCTAGGGG GCGGCTAGCA CATGCATGTA TTAGATCTAA TCTTGCTCAA CCCACCCCCA CCCGTAGATC TAGTATCCGC GATTTCTTGC TTTCCTGTAG ATCTAGAGGT ACGGGCTAAG AATCTCTCGT TAGATCTAGT CATTCCGTTG CAATATGTTT TTTTAGATCC GAGCTCGGTA CCAAGCTTGA TGCATAGCTT GAGTATTCTA TAGTGTCACC TAAATAGCTT GGCGTAATCA TGGTCATAGC TGTTTCCTGT GTGCAACGNC CAAACAAAAA ACAACAACAA AAAAGAAAAA AAACAACAAG ACAAACTCGA CAACCACCAA CACACCACAC AAACACAAGC CCAGAAAACA AAACAACCAC ACAAA // ID R25_0_0000262 standard; DNA; UNC; 740 BP. XX AC R25_0_0000262 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000262 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007f02.f1; XX FH Key Location/Qualifiers FH FT source 1..740 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000262_A FT misc_binding 148..181 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000262_1" FT /note="Base quality score is 2.2749e-04" FT misc_binding 181..215 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000262_2" FT /note="Base quality score is 2.9179e-04" FT misc_binding 215..248 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000262_3" FT /note="Base quality score is 1.8463e-02" XX SQ Sequence 740 BP; 249 A; 173 C; 182 G; 136 T; 0 other; AGTTGAAAGG AGTGATGTAT CGACTCACTA TAGGGCGAAT GGGCCTCTAG ATGCATGCTC GAGCGCGCAG TGTGATGGAT ATCTGCAGAA TTCCAGCACA CTGGCGGCCG TTACATAGTG GATCTAATTA ACGGAGTCGG TTAGGAGATC TACATATGAT GGCTTACTCT ACCGAACTAG ATCTAGCTCC ATGCTGGGAC AGATGCGTCC TTAGATCTAC CTTATCACAC TCGCTTGCCG CCCTTAGATC CGAGCTCGGT ACCAAGCTTG ATGCATAGCT TGAGTATTCT ATAGTGTCAC CTAAATAGCT TGGCGTAATC ATGGTCATAG CTGTTTCCTG TGTGAAAAGG TCATCCGGTC AAAATTCAAA AAAAAATACG AAGCCGGAAG CATAAAGTGT AAAACGCTGG GGTGCATAAT GAGTGAGCTA ACTCACATTA ATTGCGTTGC GCTCACTGCC CGCTTTCCAG TCGGGACACG GTCGTGACTG GGACAAACCC TGGCGTAACA ACCACCAATC ACACACCACA CCACCACCAA AAAAAAGAAC AAAAAGAAGA CAAAGGCGAG ACACAAGGAA CACGAAACGA CAGAAACAGA CAGAGAGTAG AGAAGGAAGG GGAGCGACAT GAGAGAGAGG AAAAAGAACC AAACACAGAC AACACGCGGA GGAGAGCCAC GCAACTAGTC CCACAGAGCG AGCAATAGCA CAAAGCACCA GACAAGAAGC ATAAACGCAG // ID R25_0_0000263 standard; DNA; UNC; 252 BP. XX AC R25_0_0000263 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000263 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007f05.f1; XX FH Key Location/Qualifiers FH FT source 1..252 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000263_A XX SQ Sequence 252 BP; 55 A; 56 C; 70 G; 71 T; 0 other; TGCGTAACGC AGTGATGTCT ACGATTCACT ATAGGCGAAT TGGGCCCTCT AGATGCATGC TCGAGCGGCG CAGTGTGATG GATATCTGCA GAATTCCAGC ACACTGGCGG CGTTACTAGT GGATCTACGG ACGGTTACGG CTGGCTTTGG GGTAGATCCA GAGCTCGTGT ACCAAGTCTT GCATGCATAC GCTTGATGTA TTCTCATAGT GTCACCTACA ATAGCTTGGC GTAATCATGG TCATAGCTGT TT // ID R25_0_0000264 standard; DNA; UNC; 626 BP. XX AC R25_0_0000264 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000264 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007f06.f1; XX FH Key Location/Qualifiers FH FT source 1..626 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000264_A FT misc_binding 112..145 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000264_1" FT /note="Base quality score is 1.1538e-04" FT misc_binding 145..178 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000264_2" FT /note="Base quality score is 3.6759e-03" FT misc_binding 178..211 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000264_3" FT /note="Base quality score is 1.7978e-03" FT misc_binding 211..244 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000264_4" FT /note="Base quality score is 5.4189e-04" FT misc_binding 244..277 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000264_5" FT /note="Base quality score is 1.0347e-04" FT misc_binding 277..310 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000264_6" FT /note="Base quality score is 4.7573e-04" FT misc_binding 310..343 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000264_7" FT /note="Base quality score is 4.5863e-03" FT misc_binding 343..376 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000264_8" FT /note="Base quality score is 3.0859e-03" FT misc_binding 376..409 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000264_9" FT /note="Base quality score is 1.2232e-03" XX SQ Sequence 626 BP; 172 A; 185 C; 136 G; 132 T; 1 other; AGGATGTATA CGATCACTAT AGGGCGAATT GGGCCCTCTA GATGCATGCT CGAGCGGCGC AGTGTGATGG ATATCTGCAG AATTCCAGCA CACTGGCGGC GTTACTAGTG GATCTACGCG GATTTGGTTA ACACGGTATC ATAGATCTAT CCCGTCGTTG TAATGTGGTT TGAGTAGATC TACCCCTGGC CCAAACCAGG AAACCCCTAG ATCTATCTGC GATAACGTAG CCGATTATAC TAGATCTAGA CCCCCGGCTA CCGCTAGACC GGATAGATCT AGACTGGCAG GACATTTACG GGTCCTTAGA TCTAAATCGC CTGTAACTGG AATTGCCCAT AGATCTACAT ATTACGACCA ACTCCGGCAC CCTAGATCTA CGGGAAGTGC CGCTCCCAAG GCGCTTAGAT CCGAGCTCGG TACCAAGCTT GATGCATAGC TTGAGTATTC TATAGTGTCA CCTAAATAGC TTGGCGTAAT CCTGGTCCTT GCTCGTTCCT GGGGAAAAGG NCATCCCACC ACACCCCCAG CACAAACAAG GCACACCACA ACAACCCACC ACACACATCC ACGCCACAAA CACACAAACG ACCAACAACA GTCGGCACGC CACACCACCC CACACG // ID R25_0_0000265 standard; DNA; UNC; 671 BP. XX AC R25_0_0000265 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000265 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007f07.f1; XX FH Key Location/Qualifiers FH FT source 1..671 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000265_A FT misc_binding 117..150 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000265_1" FT /note="Base quality score is 7.8491e-04" FT misc_binding 150..183 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000265_2" FT /note="Base quality score is 9.3233e-05" FT misc_binding 183..216 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000265_3" FT /note="Base quality score is 1.5041e-04" FT misc_binding 216..249 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000265_4" FT /note="Base quality score is 2.4962e-04" FT misc_binding 249..282 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000265_5" FT /note="Base quality score is 4.8502e-03" FT misc_binding 282..315 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000265_6" FT /note="Base quality score is 1.7429e-03" FT misc_binding 315..348 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000265_7" FT /note="Base quality score is 1.4743e-04" XX SQ Sequence 671 BP; 226 A; 145 C; 159 G; 140 T; 1 other; GGCAGTGAAT GATACGACTC ACTATAGGGC GAATTGGGCC CTCTAGATGC ATGTCGAGCG GCGCCAGTGT GATGGATATC TGCAGAATTC CAGCACACTG GCGGCGTTAC TAGTGGATCT ATATTTTGGA CAGTCCTTCT TTTCGTTAGA TCTAGTAGAT TGGGCGCATA TGCCTGGGGT AGATCTAATT GCATGGGGAA GTGGGTGAGC CGTAGATCTA GGAGTAATCC ATGGGGTCTC CGCCTTAGAT CTATATTTCG TTTTATTTGA CTAAGGGGTA GATCTATCCC CTATGTCCTG GGCTCTCAAC GTAGATCTAG CAAATGAATA ATAAGAACCC GAGTTAGATC CGAGCTCGGT ACCAAGCTTG ATGCATAGCT TGAGTATTCT ATAGTGTCAC CTAAATAGCT TGGCGNTATC ATGGTCATAG CTGTTTCCCT GTGGTGAAAA CACTACCACC AGCACCCAAA CGACACACCA AGAGAAAAGA AAACCCACCA CCCCCAAAGC GGCACCAAAC AAAACCACAA ACAGCACAAC ACACAAAAGG AGAAGAAAAA AGATCGACAG AAAATAGGAA TAAAGACGGC CAACACACAC CTTAAACCGG GACGAAAAAA AGGAATAAAA GAGGAAAAAG CAAACAAAGG CTAACGAGGA AGAAGAAGAA G // ID R25_0_0000266 standard; DNA; UNC; 250 BP. XX AC R25_0_0000266 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000266 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007f11.f1; XX FH Key Location/Qualifiers FH FT source 1..250 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000266_A XX SQ Sequence 250 BP; 74 A; 52 C; 62 G; 61 T; 1 other; ACACGTTAAC AGCAGGATGT ACTAGACTCA CTATAGGGCG AATTGGGCCC TCTACGATGC ATGCTCAGCG GCGCCAGTGT GATGGATATC TTGCAGAATT CCAGCACACT GGCGGCGTTA CTAGTGGATC CGAGCTCGGT ACCAAGCTTG ATGCATAGCT TGAGTATTCT ATAGTGTCAC CTAAATAGCT TGGCGTAATC ATGGTCATAG CTGTTTCCTG TGTGAAAAGN ACAAGAAAAG AAAAAAAAAA // ID R25_0_0000267 standard; DNA; UNC; 490 BP. XX AC R25_0_0000267 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000267 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007f12.f1; XX FH Key Location/Qualifiers FH FT source 1..490 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000267_A FT misc_binding 96..129 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000267_1" FT /note="Base quality score is 4.3274e-04" FT misc_binding 129..162 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000267_2" FT /note="Base quality score is 3.6522e-04" FT misc_binding 162..195 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000267_3" FT /note="Base quality score is 5.9400e-03" FT misc_binding 195..228 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000267_4" FT /note="Base quality score is 1.0119e-03" FT misc_binding 228..261 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000267_5" FT /note="Base quality score is 5.4435e-02" FT misc_binding 261..294 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000267_6" FT /note="Base quality score is 2.1655e-03" FT misc_binding 294..327 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000267_7" FT /note="Base quality score is 5.8845e-03" FT misc_binding 327..360 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000267_8" FT /note="Base quality score is 1.3711e-02" XX SQ Sequence 490 BP; 141 A; 114 C; 118 G; 115 T; 2 other; CGGGCGAATT GGGCCCCCCG AGATATNTGC TTCGAGCGGC GCCAGTGTCG ATGGATATCT GCAGAATTCC AGCACACTGG CGGCGTTACT AGTGGATCTA ATTAAGTTGG GTAAGAGTAT TGGGATAGAT CTAGGAAAGG AGTATAAGGC ACAGAATTTA GATCTACACC ACCGGTGTTA GGGTTCTTCC CTAGATCTAG GACAGCCCAA CCCAAGCTCC ATTGTAGATC TAGTGCTTGG ATGCGGCCGG GGAGATATAG ATCTAGACCT CGGNCGATCC ACCCTAACAA TAGATCTAAC TCGCTCCACT CGGAAATTCA CTATAGATCT ATATACCCAG AATCTACAAC TAAGGCTAGA TCCGAGCTCG GTACCAAGCT TGATGCATAG CTTGAGTATT CTATAGTGTC ACCTAAATAG CTTGGCGTAA TCATGGGCCT AGGTGTTTCC GTGTGAACAA AACAGAAACA AGAAAAGACC CGACCAACAC // ID R25_0_0000268 standard; DNA; UNC; 875 BP. XX AC R25_0_0000268 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000268 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007g01.f1; XX FH Key Location/Qualifiers FH FT source 1..875 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000268_A FT misc_binding 111..144 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000268_1" FT /note="Base quality score is 1.2821e-04" FT misc_binding 144..177 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000268_2" FT /note="Base quality score is 4.7012e-05" FT misc_binding 177..210 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000268_3" FT /note="Base quality score is 1.8867e-05" FT misc_binding 210..243 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000268_4" FT /note="Base quality score is 1.2615e-04" FT misc_binding 243..276 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000268_5" FT /note="Base quality score is 1.1629e-04" FT misc_binding 276..309 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000268_6" FT /note="Base quality score is 1.0574e-04" FT misc_binding 309..342 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000268_7" FT /note="Base quality score is 1.9397e-04" FT misc_binding 342..375 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000268_8" FT /note="Base quality score is 5.0491e-04" FT misc_binding 375..408 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000268_9" FT /note="Base quality score is 3.5381e-03" FT misc_binding 408..441 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000268_10" FT /note="Base quality score is 7.5144e-03" FT misc_binding 441..474 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000268_11" FT /note="Base quality score is 4.9853e-03" FT misc_binding 474..507 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000268_12" FT /note="Base quality score is 1.9288e-02" FT misc_binding 507..540 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000268_13" FT /note="Base quality score is 4.3060e-02" XX SQ Sequence 875 BP; 306 A; 188 C; 191 G; 188 T; 2 other; GATGTATACG ATTCACTATA GGGCGAATTG GCCCTCTAGA TGCATGCTCG AGCGGCGCCA GTGTGATGGA TATCTGCAGA ATTCCAGCAC ACTGGCGGCG TTACTAGTGG ATCTACAAAT TTCCCAGCAG ATTTCCCCAC TAGATCTAAC AAAAATCGGA CTGCTACTAC TCATAGATCT AAGGATCCCG GGGGACATTC TAGTTATAGA TCTAGATCCG AACGGTAGCG AAGCGCCTGT AGATCTATGA TTGGGGCGTT GGAGTGGGCT ACTAGATCTA CTAGCGGGTG TGCTGCGAAA AAAATTAGAT CTAGGGGGGG TGGAGACTCG GTCTATGTTA GATCTAGGTT TAGCAAACTC TAGGTCCTGA TTAGATCTAA AAGTCGCCTC ACTATGGATT ACCGTAGATC TATTAAGAAT CCCAGCAAAT TCGCCGGTAG ATCTACGCAC CGGTACGGGG GAGTTGTAGA TAGATCTAGG CCCATCGTAC TAAAATCGAA CGTTAGATCT ATTGAAATAA ACGTCATCCA CGCGTCTAGA TCTAACAAAG CTCATCTAGA CGTAAACAAA GATCCGAGCT CGGTACCAAG CTTTGATGCA TAGCTTGAGT ATTCTATAGT GTGACTAAAT AGCTGGGGTA TCCTGGTCTT TCTTCGGGGG GAAGGNNAGA TCAACAGACA AAAATACACC ACAAAACATT AAAAAGAATA CAACACATAC ACACAAACCA CCAGCAAACA CCATATACAA ATAGACAAAG AGAAAAAAAA AGAGAAAGAA AATAACACAA CACAACAGAA CACAGCACAA AAGACTAGAC GACAACACTA CACATAACAC ACAACACTCA TGACAAACGA ACAGAGAGAG AAGAA // ID R25_0_0000269 standard; DNA; UNC; 942 BP. XX AC R25_0_0000269 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000269 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007g02.f1; XX FH Key Location/Qualifiers FH FT source 1..942 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000269_A FT misc_binding 125..158 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000269_1" FT /note="Base quality score is 9.9681e-04" FT misc_binding 158..191 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000269_2" FT /note="Base quality score is 9.2565e-04" FT misc_binding 191..224 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000269_3" FT /note="Base quality score is 9.9992e-04" FT misc_binding 224..257 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000269_4" FT /note="Base quality score is 7.2413e-04" FT misc_binding 257..290 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000269_5" FT /note="Base quality score is 1.3000e-02" FT misc_binding 290..323 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000269_6" FT /note="Base quality score is 1.7863e-03" FT misc_binding 323..356 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000269_7" FT /note="Base quality score is 2.8965e-03" XX SQ Sequence 942 BP; 328 A; 240 C; 171 G; 201 T; 2 other; CCGTGTAACA GGAGATGATG TAACGACTCC TATAGGCGAA TTGGGCCCTC TAGATGCATG CTCGAGCGGC GCAGTGTGAT GGATATCTGC AGAATTCCAG CACACTGGCG GCCGTTACTA GTGGATCTAA GGGCCTTATG AGACTTATTT AGTTTAGATC TAAAGAGCCC TAGCCCCACG CCTGAGATAG ATCTATTGCA GGCGCGGAAT ACTGCTCACG TAGATCTACG ACCTGTCGTA CATCCGCCAA AGATAGATCT AGGGCGGATT GTAGGGCGTC GGCCAGTAGA TCTATTTAGC TGTTTTAGCA GTGTACCGTT AGATCTAAAA ACGCATCCAT CCTGACCTAA GTTAGATCCG AGCTCGGTAC CAAGCTTGAT GCATAGCTTG AGTATTCTAT AGTGTCACCT AAATAGCTTG GCGTAATCAT GGTCATTGCT GTTTCCTGGT TGTGAACGGN TATCCAGCCA CACAACATCA CACACAAAAC ATTAGAGAGC CGCAACGCTC TAAAGGTGTA AAGCCCAGGG GTGTCCTAAT GAGCTGACGC TACCTCACCT CTACTTCGCG TCGAGCCTCA CTGCCAGGCT TACAAGTCGG GGAACCCTGT TCGTGACTGN GACAAACTGT GTGCAACACA CACGACGAAC AACAACTAAA CAAGATACAA ACAAAACTAA AACAACACCA ACATAACACC ATAAAAAAAC AACAAAAAAT AGATGATCAA AATCAAACAA CAATACACAC AACCAACCAA ACATAACAAT CTAACACACC GACTACGATC AAACAATAAT TACATAATCA ACAAAAAAAT AAATTAACCA AGAACAACAA ATAATACATC ACTAAGTCAT ATCAACATAC TACCTCAACC AACATCAACG CACAGATCCA GCTAACATAA ATCATTCCAT GCACCACCCA AACAATCGAA TC // ID R25_0_0000270 standard; DNA; UNC; 417 BP. XX AC R25_0_0000270 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000270 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007g04.f1; XX FH Key Location/Qualifiers FH FT source 1..417 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000270_A FT misc_binding 134..167 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000270_1" FT /note="Base quality score is 1.4243e-02" FT misc_binding 167..200 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000270_2" FT /note="Base quality score is 6.4972e-02" FT misc_binding 200..233 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000270_3" FT /note="Base quality score is 2.5254e-02" FT misc_binding 233..266 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000270_4" FT /note="Base quality score is 3.2017e-02" XX SQ Sequence 417 BP; 98 A; 89 C; 113 G; 117 T; 0 other; AGGTGGTATA ACCGCAGTGA ATGTATTACG ACTCACTATA GGGCGAATTG GGCCCTCTAG AATGCATGCT CGAGCGGCGC CAGTGTGATG GATATCTGCA GAATTCCAGC ACACTGGCGG CCGTTACTAG TGGATCTACA GGCCGTGATT AGTTGTTTAC AGTTAGATCT ATTGCTGCCT CCGTTTGGCC GTAGAGTAGA TCTATCGCGA CGCCTCATGG GAGAGGTAAT AGATCTAAGC GAGGAGTGAC TGACCTATTA GATAGATCCG AGCTCGGTAC CAAGCTTGAT GCATAGCTTG TCGTATTCTA TAGTGTCACC TAAATAGCTG GGCGTATTCA TGGTCATAGC TGTTTCCTGT GTGAAAGTGA TCCTGGTCAT AGCTGTTTCC TGTGTGACAA GGTGCAACAT CACCCGT // ID R25_0_0000271 standard; DNA; UNC; 249 BP. XX AC R25_0_0000271 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000271 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007g05.f1; XX FH Key Location/Qualifiers FH FT source 1..249 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000271_A XX SQ Sequence 249 BP; 67 A; 53 C; 64 G; 64 T; 1 other; CGGTGAAAAG CATGATGTAT ACGACTCACT ATAGGGCGAA TTGGGCCCTC TAGATGCATG CTCGAGCGGC GCCAGTGTGA TGGATATCTG CAGAATTCCA GCACACTGGC GGCGTTACTA GTCGAGCTCG GTACCAAGCT TGATGCATAG CTTGAGTATT CTATAGTGTC ACCTAAATAG CTTGGCGTAA TCATGGTCAT AGCTGTTTCC TGTGTGAAAA GGNAATGACA ATGAATTCCA CACAGCAAT // ID R25_0_0000272 standard; DNA; UNC; 824 BP. XX AC R25_0_0000272 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000272 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007g06.f1; XX FH Key Location/Qualifiers FH FT source 1..824 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000272_A XX SQ Sequence 824 BP; 305 A; 181 C; 133 G; 204 T; 1 other; TGGGGATTGG GCCCCTGAGT AATGTCTAGC GGCGCCAGGG TCCATGTATA TCTAGCAGAA TTCCAGCACA CTGGCGGCCG TACTAGTGGA TCTATTGTTT GTTGCAGTTC TAGTACGAGT TATAAGATCT ACACGGGGCT ATAGAACGCA TGCAACTTTG TTAGATCTAT ATTACAAAGA AACACCGTGC GTAGGCAAGA TCTAAAACGC GAATACCGAT CACCAGATCG TAAATCTATT CGTAACGACG CCATCGAGTG GATAGTAGAA CTACGGACGT AGGTCACCAT AGAAATTTAC GATCTCACTA AGCATGGGGA GGTACTAGTG TATCAGATCT TAAGCTCCTG GAAAGACCAG GCTAGGCACA ACAATACTAT GGTAGACCAA ACTAAGACCG GCTGCTCATA ATAAGATTAT ATTATCACAG GAGAACTACG TCGCATCTTT TGAGTCCCGC ATATACTAGT AAAGCCCGCC CTTAGGTATA TCGCCCACAC TATACTTATC TCTAATACCC CAGCCGCCAA AGACATAATT AAATACAATA CCACATAATT CAATCATACT ATATTATCAC ATAACATTAC ACAGCTATAT TACAGAGGCC TTAATTAGAC ACCATATTAG TAATTAACAA AAAGTGATCA CTCAATATAC TAATTACAAA AAAATATAAT CAATAATACA ACTAGAAAAA ACGATAGGGT AATCAACATA AAACACCATA TATATCACAA CTACAAAACA GTGATCAATA TACAAACTTC ACACACAATG ATCACAAACA ATAACNACTA TTCAATATTA CATAAATTAC CTAC // ID R25_0_0000273 standard; DNA; UNC; 745 BP. XX AC R25_0_0000273 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000273 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007g10.f1; XX FH Key Location/Qualifiers FH FT source 1..745 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000273_A FT misc_binding 129..162 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000273_1" FT /note="Base quality score is 1.0542e-02" FT misc_binding 162..195 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000273_2" FT /note="Base quality score is 1.7340e-02" FT misc_binding 195..228 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000273_3" FT /note="Base quality score is 2.7526e-04" FT misc_binding 228..261 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000273_4" FT /note="Base quality score is 3.1384e-03" FT misc_binding 261..294 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000273_5" FT /note="Base quality score is 2.2708e-03" FT misc_binding 294..327 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000273_6" FT /note="Base quality score is 1.7328e-03" FT misc_binding 327..360 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000273_7" FT /note="Base quality score is 7.7302e-03" FT misc_binding 360..393 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000273_8" FT /note="Base quality score is 1.7176e-03" XX SQ Sequence 745 BP; 251 A; 200 C; 126 G; 167 T; 1 other; CACCCCCAGC GAAAGCCAGG ATGCATACGT ATCCTATAGG GCGAATTGGG CCTCTAGATG CATGCTCGAG CGGCGCCAGT GTGATGGATA TCTGCAGAAT TCCAGCACAC TGGCGGCGTT ACTAGTGGAT CTAACCGGTC GCCTGTGATT CAGGAAAGTA GATCTATAAG GATTATCCCA CATTATTGTC TTAGATCTAG CATCTCGAAA ACCACCCACA GATGTAGATC TAGATTGGAC CTCCGTGGTC ACCCCGTTAG ATCTACTTCT GCAGTCCGAC CATCTCTCCT TAGATCTAAC GTTTAGGAGG GAAGGTTGTG GTGTAGATCT AGGAGAAAGA TAAGTCAGTG ATGCGTTAGA TCTAAGCCAT AGCTGTGTTG AATTACTTAT AGATCCGAGC TCGGTACCAA GCTTGATGCA TAGCTTGAGT ATTCTATAGT GTCACCTAAA TAGCTTGGCG TAATCATGGT CCTAGCTGTT TCCTTGTGAA AAGGNCCACC CCTCACAAAC CGCCAACACA ACCCCCGACA CACACCAAAC CCACCACACC CCCCACCCCC AATAAAAAAT AAACTAACAA AAATATCTAA CACCAACAAC CCCACCACAC ATCCACTAAA CCACAACAAC AAACAAATTA CCAAATAACA TAGTACATAA TATAACAACA GACAAACCAC TCTATAATAC TCACATCAAA CACATCAAAC CATATGCTAA TTACTAAAAA CAACAATATC AAAAA // ID R25_0_0000274 standard; DNA; UNC; 700 BP. XX AC R25_0_0000274 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000274 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007h06.f1; XX FH Key Location/Qualifiers FH FT source 1..700 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000274_A FT misc_binding 113..146 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000274_1" FT /note="Base quality score is 3.2171e-04" FT misc_binding 146..179 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000274_2" FT /note="Base quality score is 1.9091e-03" FT misc_binding 179..212 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000274_3" FT /note="Base quality score is 3.8958e-04" FT misc_binding 212..245 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000274_4" FT /note="Base quality score is 1.2579e-04" FT misc_binding 245..278 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000274_5" FT /note="Base quality score is 6.3670e-05" FT misc_binding 278..311 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000274_6" FT /note="Base quality score is 6.8769e-05" FT misc_binding 311..344 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000274_7" FT /note="Base quality score is 2.1655e-04" FT misc_binding 344..377 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000274_8" FT /note="Base quality score is 1.3380e-03" FT misc_binding 377..410 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000274_9" FT /note="Base quality score is 2.5177e-03" FT misc_binding 410..443 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000274_10" FT /note="Base quality score is 6.6232e-04" XX SQ Sequence 700 BP; 218 A; 158 C; 163 G; 160 T; 1 other; AGTGATGTAT ACGAGTCACT ATAGGGCGAA TGGGCCCTCT AGATGCATGC TCGAGCGGCG CAGTGTGATG GATATCTGCA GAATTCCAGC ACACTGGCGG CGTTACTAGT GGATCTAAAT TATATGATAG CTGTTGGTTA GTTAGATCTA CGTATTCCCC CCGCGACCCA CTACTTAGAT CTAATGAAGC CAAAGCACGA ACCAAGTATA GATCTATGAG GTGCGGAAAG GTCGAGGTTA TTAGATCTAT TGGGAAGGCT TGATGACCGT CGGCTAGATC TAACGTTTAC ACGGCCCGTG CTCCCTCTAG ATCTACAATC CGGATGCATC GCTGAACTAG TAGATCTAAC GGCTTGGGGA AGCTAAACCG ACATAGATCT AACAGGCGCA GGGGTAGAGG ATTTATTAGA TCTACATAGA CATATCTACA AGGCCATACT AGATCTAGTG TTGACATCGT ATTAATGTAA ATAGATCCGA GCTCGGTACC AAGCTTGATG CATAGCTTGA GTATTCTATA GTGTCACCTT AAATTGCGTT GGCGTAATCA CTGGCCTATG CTGTTCTGTG TAAAAAGGGG TCCGCGATAC CACACAGAGA ACAGACAGGC CACAAAAACA CAGACACCAG ACGAATCAAG CAAACAAAAA ACAGAGACAA AGCACCCCAC AGCAGATCAA TGACAAAACC ACCACACACN // ID R25_0_0000275 standard; DNA; UNC; 776 BP. XX AC R25_0_0000275 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000275 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x007h07.f1; XX FH Key Location/Qualifiers FH FT source 1..776 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000275_A FT misc_binding 245..278 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000275_1" FT /note="Base quality score is 7.6438e-03" FT misc_binding 278..311 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000275_2" FT /note="Base quality score is 6.1198e-03" FT misc_binding 311..344 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000275_3" FT /note="Base quality score is 2.7180e-02" XX SQ Sequence 776 BP; 305 A; 168 C; 164 G; 139 T; 0 other; GAACACAGAC AGATGTATAC GAGTCACTAT AGGGCGAATA GGGCCTCTAG ATGCATGCTC ACGGCGCAGT GTGATGGATA TCTAGCAGAA TTCCAGCACA CTGGCGGCCG TTACTAGTGG ATCTACTCAT TTCTTAGTGT TGCCCCAAGG TAGATCTACA TGTGATGGAA TATAGGTGTG TATTAGATCT AATTGGGCCA TGATAGTGAG GAAATATAGA TCTCGACATA CAGAAGAGAT GGAGATCTAG CAACGCACAT TGCCCATAAC CACATAGATC TACGTGCATT CGGCTACACG GAATCCATAG ATCTATACTC CACACTCTCG GACTAACGCC TAGATCTAAT GAGGGCTGCA ATATCTAGAT CCGAGCTCGG TACCAAGCTT GATGCATAGC TTGAGTATTC TATAGTGTCA CCTAAATAGC TTGGCGTAAT CATGGTCATA GCTGTTTCCT GTGTTGAAAC CGCGGCCAGG ATTCACCACA CAGAAACACA CAGGAGAGAA CCACCCAACA ACAACAAAAG AGACACAACA ACAAAAAAGC AAGAAATATC ACACAACAAG AAGAGCACCA GAAACAAAAC AACAAAAGAG GAAAAAGACA GACGAAAACG CGAGGAACAA AAAAAAAGAC AGAACAAGGG AACCAAGCTA ACAACAAAAA ACCAGATACA GAGACAAATA AGAATAAACC GAAGAAAAAA AAGACAGACA ATAGGAAGAA CAGACAAATA CGGCATCTCA CAAAGCGGCA TAACGGGATA CACAAT // ID R25_0_0000276 standard; DNA; UNC; 869 BP. XX AC R25_0_0000276 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000276 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x008a02.f1; XX FH Key Location/Qualifiers FH FT source 1..869 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000276_A XX SQ Sequence 869 BP; 425 A; 234 C; 98 G; 110 T; 2 other; GCTATACGCG TGAATGTATA CGATTCACTA TAGGGCGAAT TGGGCCCTCT AGATACATGC TCGAGCGGCG CCAGTGTGAT GGATATCTGC AGAATTCCAG CACACTGGCG GCCGTTACTA GTGGATCCGA GCTCGGTACC AAGCTTGATG CATAGCTTGA GTATTCTATA GTCACCTAAA TAGCTTGGCG TAATCATGGT CATAGCTGTT TCCTGTGTGA AAAGCGCGCC AGGTTTACCC AGACAAGAGC GACAAGTAAT CACAAAATCA CAATCGACAC TGAAACCTCA AACAACAAAC AACAAACAAA AAAAAAAAAA CACCAAAACC AAGAAACACT AAACACATCA TCAAACACAA ACAACACACA TAAATAACAA CAAAAACCCA ATAACAACCA CACACACAAC ACAAACAAAA CACAAAAAAA CAAAAACAAC ACACATACAA CATATATACA AAAAAAAAAA TAAAGACAAC ACACCAAACC AAACAACAAC AAACAACCAC AAACAAAAAA ACCAAACACA CAAAACAACT ACACAACCAT AATATAACAA AAATACACAA CCACAAACAT CACAACCAAC AAACCAACAT ACCATACACA CACTAACCAT AAATCCACCA ACCACCAGCC AACTCACCAA CACAAAGAAA CACAAAGAAA AACAGGAAAC AAACAGAACA CAAAAAAAAT ACAAGAAAAA CAAAAAAACC ATACAGCAAC GAAACACAAA ATACGACTAA TGACAACAGA ACGTAGACAA ACGAGACAAA AAGAAGAAAC AAAAAGTAGA ACGAACACTA ACTACGAACG ACACACTCTT CCTCCCTCCA CCCCCTTGTN NAAAGCACAC CAAAACACG // ID R25_0_0000277 standard; DNA; UNC; 729 BP. XX AC R25_0_0000277 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000277 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x008b03.f1; XX FH Key Location/Qualifiers FH FT source 1..729 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000277_A FT misc_binding 113..146 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000277_1" FT /note="Base quality score is 6.0047e-03" FT misc_binding 146..179 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000277_2" FT /note="Base quality score is 7.1802e-03" FT misc_binding 179..212 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000277_3" FT /note="Base quality score is 1.2305e-02" FT misc_binding 212..245 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000277_4" FT /note="Base quality score is 1.5560e-03" FT misc_binding 245..278 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000277_5" FT /note="Base quality score is 1.7314e-03" FT misc_binding 278..311 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000277_6" FT /note="Base quality score is 4.0393e-03" FT misc_binding 311..344 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000277_7" FT /note="Base quality score is 2.1927e-03" FT misc_binding 344..377 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000277_8" FT /note="Base quality score is 1.5519e-02" FT misc_binding 377..410 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000277_9" FT /note="Base quality score is 7.6812e-04" XX SQ Sequence 729 BP; 239 A; 170 C; 138 G; 182 T; 0 other; TGTATACGAG CTCACTATAG GGCGAATTGG GCCCTCTACG ATGCATGCTC GAGCGGCGCC AGTGTGATGG ATATCTGCAG AATTCCAGCA CACTGGCGGC CGTTACTAGT GGATCTATGA ATTAGGTACA GAATGGGTTG CTTAGATCTA TAAGCGTGTT GTCTGACTGA TGGCGCAGAT CTACTTGACA ACCGCGTCCT GTCTGACCTA GATCTATGAG CGTAGTCGGC TCGTCATTGC CTAGATCTAC TGCTCCCGAT TCCGCACAAT CGTGTAGATC TAACCCTCCA CTCCCAAATT TAGCCGCTAG ATCTAGTTGC GCGATTGCCT TTATGGGATA TAGATCTATT ATAATGCATG CGGGAACGTC CATTAGATCT ATCACACGTA GACCCAAGCA TCAGCTTAGA TCCGAGCTCG GTACCAAGCT TGATGCATAG CTTGAGTATT CTATAGTGTC ACCTAAATAG CTTGGCGTAA TCATGGTCAT AGCTGTTTCC TGTGTGAAAA CCGCGCCGGG TTCACCAGAA GACAAGACCG CAAGTACAAC AATCAGACGT AAGACTTACA AATATAAAAT ACATAAAAAC ACACAGAAAA CATTACAAAT AAATTAAAGC TAACAACAAA AACAAACACA ACAACTGAAC CTATATCAAA AACAAAAGCA ATACAATATA TCAACATTAA TACTAAAATA TCCACACCAT ATCAATCTAT ACAAAAATT // ID R25_0_0000278 standard; DNA; UNC; 776 BP. XX AC R25_0_0000278 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000278 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x008b06.f1; XX FH Key Location/Qualifiers FH FT source 1..776 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000278_A FT misc_binding 123..156 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000278_1" FT /note="Base quality score is 5.0291e-02" FT misc_binding 156..188 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000278_2" FT /note="Base quality score is 1.5413e-02" FT misc_binding 188..220 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000278_3" FT /note="Base quality score is 5.5902e-02" FT misc_binding 220..253 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000278_4" FT /note="Base quality score is 4.8162e-02" FT misc_binding 253..286 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000278_5" FT /note="Base quality score is 4.1886e-02" XX SQ Sequence 776 BP; 312 A; 154 C; 159 G; 149 T; 2 other; TAATCGGCAG TGAATTGTAT ACGAGTCACT ATAGGGCGAA TTGGGCCTCT AGATCATGCT CGAGCGGCGC CAGTGTGATG GATATCTGCA GAATTCCAGC ACACTGGCGG CGTTACTAGT GGATCTAGTG CTTGCGAGTA CTATATGGAG AATAGATCTA GGCACAGGTG GGCTGTGCTG ACGGTAGATC TAAACCTTAT ATCTCTATAA GTTCCATAGA TCTAGCGAGT TGTTGCGATC TCTGGCCTTT AAATCTATCG GTTTGACGCC TATGTTTGGG TGTAGATCCG AGCTCGGTAC CAAGCTTGAT GCCTAGCTTG AGTATTCTAT AGTGTCACCT AAATAGCTTG GCGTAATCCT GGTCATAGCT GTTTCCTGTG TGAAAATGGC GGGAGGGACA CAGCAACACG ACCGACAAGG TACCCAGAAG TAAGAACGAA AGGATACACA AGAAAAAGAA CAGCAAAGAC ACCCAAAAAA CAAGACAGAA AGAGAAAAAA CAAATGACAA CCGAACGGCA AACAACAAAC CAATCAGAAA GACAAAGGAA GCGGCATAGA GTGACAACCC CCTCGAAGAC ACGGCAAACA AAACGAGAGA AAACAATACT AATACAAACA AGACACAATA AAAAACATAG AAAATACAAA ATAAACACAA CACAACAAAA AGAAAAAAAA AAAAAAAAAC AAAAACAAAT AAACACAAAC AATGAAAGAA ATATATAAAA ATAGTTGTTT TTTCCCCAAT GATNNAAATA AACCAGCAAC ACAAAC // ID R25_0_0000279 standard; DNA; UNC; 784 BP. XX AC R25_0_0000279 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000279 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x008b11.f1; XX FH Key Location/Qualifiers FH FT source 1..784 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000279_A FT misc_binding 113..146 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000279_1" FT /note="Base quality score is 3.1279e-02" FT misc_binding 146..179 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000279_2" FT /note="Base quality score is 2.8789e-02" FT misc_binding 179..212 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000279_3" FT /note="Base quality score is 1.3869e-02" FT misc_binding 212..245 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000279_4" FT /note="Base quality score is 7.2918e-02" FT misc_binding 245..279 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000279_5" FT /note="Base quality score is 4.5899e-02" FT misc_binding 279..312 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000279_6" FT /note="Base quality score is 1.8212e-02" XX SQ Sequence 784 BP; 288 A; 167 C; 142 G; 187 T; 0 other; TGTATACGAT TACACTATAG GGCGAATAGG GCACTCTAGA CTCATGCTCG AGCGGCCGAC AGTGTGATGG ATATCTGCAG AATTCCAGCA CACTGGCGGA CGTTACTAGT GGATCTAGTA TTTGTTAATA TATGTACTGG GTTAGATCTA TTAAGCGGTT TCGAATGAAG AACTCTAGAT CTACCTTAGA GTCGAGCTGC ATAGTGCTTA GATCTACCTC TATAGGCAGG CGGGTTCGCT TTAGATCTAG AGGCGCGGAG ACCTAAACCC TTTCCTAGAT CTATATCGCG ACGGTGTGCA AATTTGGTTA GATCCGAGCT CGGTACCAAG CTTGATGCAT AGCTATGAGT ATTCTATAGT GTCACCTAAA TAGCTATGGA GTAATCATGG TCATAGCTGT TTCCTGTGTG AAAATCTCGC CGGGTTACCA AGACGTCACG AGCGGCGAGT TACCCCCCTC GGCAGACACC GCAGATCTAC CCCACACAAC GGCATTAACT AGCATACAAC ACTATACTAA GATGCACACA CCCGGATAAC AATCACATCT AGCTACATCC ATCTACTCTT ATAAAAAACA CTAAAGAACT CACAAAGACA ATACAAACAA GCAAATAATA ATAAATATAA ATAATAAACA CAGACAATAA CGATTAAATA ACCAATATAC GCAAGATAAA AGAAAAACAA ATGAGAATAA TAAATAAAAA TATACTAAAA AAATAAAATA TATAGATCAA TATGAAACAC TAGATAAACA CAACAATCAA TCAAAGACCT AACC // ID R25_0_0000280 standard; DNA; UNC; 838 BP. XX AC R25_0_0000280 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000280 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x008c01.f1; XX FH Key Location/Qualifiers FH FT source 1..838 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000280_A FT misc_binding 112..145 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000280_1" FT /note="Base quality score is 3.2899e-02" FT misc_binding 145..179 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000280_2" FT /note="Base quality score is 5.3777e-03" FT misc_binding 179..212 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000280_3" FT /note="Base quality score is 1.4291e-03" FT misc_binding 212..245 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000280_4" FT /note="Base quality score is 7.2075e-03" FT misc_binding 245..278 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000280_5" FT /note="Base quality score is 2.0496e-02" FT misc_binding 278..310 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000280_6" FT /note="Base quality score is 8.1419e-03" FT misc_binding 310..343 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000280_7" FT /note="Base quality score is 8.8354e-02" FT misc_binding 343..376 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000280_8" FT /note="Base quality score is 3.3164e-03" XX SQ Sequence 838 BP; 273 A; 215 C; 153 G; 190 T; 7 other; TGATGTATAG ATCACTATAG GGCGAATTGG GCCCTCTAGA ATGCATGCTC GAGCGGCGCC AGTGTGATGG ATATCTGCAG AATTCCAGCA CACTGGCGGC CGTACTAGTG GATCTATATA AACAACACCG CCTCCATTCC CTAGATCTAA GGACCATTCG GCGTACGGGG GTGGATAGAT CTAACATTAT TATCCCCACT TCGTCCTATA GATCTATCAG GTGGGGGCGG GGTCTTTGGT CTAGATCTAA TGCTTTCGAC TCCACTCTAT GACGTAGATC TATCGCCCAC ACGCCCTTAT CGCCATTAGA TCTACGGAAC GGGCAGACAG ATATAACCTT AGATCTACCT AGGAGTGAAA GATAACAAAC CTTAGATCCG AGCTCGGTAC CAAGCTTGAT GCATAGCTTG AGTATTCTAT AGTGTCACCT AAATAGCTTG GCGTAATCAT GGTCATAGCT GTTTCCTGTG TGAAAATCCC GCGAGGTTCC CCGGCGACAC GAGCGCGGAT TTCTCCCACA TTCAAAAGCG AAACATTCCA CACATACAAC AAAATCAGCA ACTATCATTC ACATCACCAG ATCAGACATC ATCACACACA TGAACACACA CAAATAAGTA AAGAAAACAC AGAGGAAAAC ACTACTAACA CCATACGAAC AGACAGCAAG AAGAGGACTA TCAGATACAG CACAATATAA ACTCATACTA AGGTACAAAC TACACGTAAA AAGAACACAT ACAACAATAA CAACAACAAA GAACATCACA TCAGATGCAA AAAACTAATA ATCCACTTTC TTCTTCTTCT GTCTCGCCCC CTCCTCTCNT NNNGNNTN // ID R25_0_0000281 standard; DNA; UNC; 902 BP. XX AC R25_0_0000281 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000281 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x008c02.f1; XX FH Key Location/Qualifiers FH FT source 1..902 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000281_A XX SQ Sequence 902 BP; 410 A; 222 C; 171 G; 99 T; 0 other; TGTACAACGG CAGGACTGTA TACGATTCAC TATAGGGCGA ATTGGGCCTC TAGATGCATG CTCGAGCGGC GCCAGTGTGA TGGATATCTG CAGAATTCCA GCACACTGGC GGCCGTTACT AAGTGGATCC GAGCTCGGTA CCAAGCTTGA TGCATAGCTT GAGTATTCTA TAGTGTCACC TAAATAGCTT GGCGTAATCA TGGTCATAGC TGTTTCCTGT GTGAAAAGCG CGAGAGGGAT CTCCGAGATA CGAACGACAG TGACTCAAAC CCAGAACAAG ACCAGCAGAG CAAAAAAAAA CAGATACAAA ATCGTCAACA CATACAAAAC ACCAAAAAGA AAAAAAACAC ACACAACACA ACCAAAGACA AAACACACAA AAATCACAAT CAAAAAACAC AAAAACCACA ACAAACGAAA AATAAAAAAC AAACACAGAA CAAACACAAA AAACGAGTAA CAAAGCCAAC ACGTCGAACA AAAACTAACA CAGCAAACAG ATAAACAGAG ACGTACCAAT ACACCTACAA AACGAAAAAA ATAGAGAGAA AAAACATAGA ACCAAAGTCA CCACCAAACA AAACACGACA TCACCACCAC CACACACAAC GAAAGCAGAA AAAGACGCAC AAAAGACAGA AGAAAAAAAA AACAACACAC AGAAGGAGGA CAAAAGGGAC AAACACAGAA GGAGCCACAG CGTGGGCAGC AGACAAACAC CCACCAACTC CGCGTCACCG GGACAGGACA GAAGAACCGA AACAGAACTC AGAGAGCGAA CAGAGGAGCG CTAGCATCAG AAACAAAGCG CATATATATG ACCGAACGAG CTCCAAGCAC ACCGAGAAGT AGACCAGAAG CCGACAACAG CAAATAAAGC AACAACGTAG CCAAGAGACT AA // ID R25_0_0000282 standard; DNA; UNC; 580 BP. XX AC R25_0_0000282 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000282 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x008c04.f1; XX FH Key Location/Qualifiers FH FT source 1..580 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000282_A FT misc_binding 119..152 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000282_1" FT /note="Base quality score is 5.4360e-02" FT misc_binding 152..185 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000282_2" FT /note="Base quality score is 2.6390e-02" FT misc_binding 185..218 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000282_3" FT /note="Base quality score is 3.9896e-02" FT misc_binding 218..251 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000282_4" FT /note="Base quality score is 6.7469e-02" FT misc_binding 251..285 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000282_5" FT /note="Base quality score is 1.1835e-01" FT misc_binding 285..318 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000282_6" FT /note="Base quality score is 5.2495e-02" FT misc_binding 318..351 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000282_7" FT /note="Base quality score is 5.1857e-02" XX SQ Sequence 580 BP; 190 A; 147 C; 126 G; 117 T; 0 other; AAGTGAATTG TATACGAGTC ACTATAGGGC GAATTGGGCC CTCTAGATGC ATGCTCGAGC GGCGCCAGTG TGATGGATAT CTGCAGAATT CCAGCACACT GGCGGCCGTT ACTAGTGGAT CTACTCGCTA GTACTCTACA ATAAATATTA GATCTACGCG AACCCAAGCC GCGGAAGTAA GTAGATCTAG TATACCCCAC CCCAGACGCC CGGATAGATC TAGGGGTGTG GCGTCAGCAG GTTAGCATAG ATCTAACACA GATGGTACCG CAAACACAAA GTAGATCTAG CTCATTGGCC CAGATACTCG AGGATAGATC TAGGGTCACA TGCGATAACT GCCAGTTTAG ATCCGAGCTC GGTACCAAGC TTGATGCATA GCTGGAGTAT TCTATAAGTG TCACCTAAAT AGCTTGGCGT TATCCTGGTC ATAGCTGTTT CCTGTGTTGA AAATCCAGGA AGATCCACCA CAAACCACCC AAGTATACAA ACACAAAACA ACAACAGCAC ATAAACCAAA CAAGACAGAA AGAAAAACAA CAACCAAGCC AACACCCACG ACCAGACACC AACACGATCG // ID R25_0_0000283 standard; DNA; UNC; 240 BP. XX AC R25_0_0000283 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000283 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x008c06.f1; XX FH Key Location/Qualifiers FH FT source 1..240 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000283_A XX SQ Sequence 240 BP; 60 A; 55 C; 56 G; 69 T; 0 other; TGATTGTATA CGTTCACTAC TTGGGCGAAT TGGGCCCTCT AGCATCATGC TCGAGCGGCG CCAGTATGAT GGATATCTGC AGAATTCCAG CACACTGGCG GCCTGTATAC GTAGTGGATC CGAGCTCGGT ACCAAGCTAT GATGCATAGC TTGAGTAATA TCTATATGTG TCACCTCAAA TATGCTATGG CGTCAATCTT ATGTCATAAG CTAGTATTCC TAGTAGTGAC ACAATCCTCG // ID R25_0_0000284 standard; DNA; UNC; 475 BP. XX AC R25_0_0000284 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000284 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x008c09.f1; XX FH Key Location/Qualifiers FH FT source 1..475 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000284_A FT misc_binding 117..151 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000284_1" FT /note="Base quality score is 2.4755e-02" FT misc_binding 151..183 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000284_2" FT /note="Base quality score is 3.3941e-02" FT misc_binding 183..216 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000284_3" FT /note="Base quality score is 9.5562e-02" FT misc_binding 216..250 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000284_4" FT /note="Base quality score is 7.6046e-02" XX SQ Sequence 475 BP; 159 A; 97 C; 108 G; 111 T; 0 other; AGTGAATTGT ATACGATCAC TATAGGGCGA ATTGGGCCCT CTAGATCATG CTCGAGCGGC GCCAGTGTGA TGGATATCTG CAGAATTCCA GCACACTGGC GGCCGTATAC TAGTGGATCT AAGAGTGGGG TTCAAGACGT GAGGGTATAG ATCTTACCCG CGGAATAGTG GCGGGAACCT AGATCTAGGT ACGCTACGGG CGGTTCTGTG CATTGATCTA CAAAATCCTA AGAGTATCTC CTATCTTAGA TCCGAGCTAC GGTACCAAGC TTAGATAGCA TAGCTAGAGT ATTCTATAAG TGTCACCTAC AATTGCTTGG CGTAATACAT AAGTACATAG CTGTATTCCT AGTGTGAAAA AGGACGGAAA GGATACACAC TACTAAAGAG AGCAGTACCT GAGAACTTCA CACACAGAAA ATGAAATAAA TAAAAAATAA TAACTCCACA TATCGATAAC AAACAAACAA CAACC // ID R25_0_0000285 standard; DNA; UNC; 1273 BP. XX AC R25_0_0000285 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000285 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x008c10.f1; XX FH Key Location/Qualifiers FH FT source 1..1273 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000285_A XX SQ Sequence 1273 BP; 392 A; 328 C; 279 G; 255 T; 19 other; TCNNGCCGCG GAAAAACGCA GAGAATGTAG TACGTGTCAC ATATAGGGCG AATAGGGCCT CTAGATACAT GCTCGAGCGG ACGCAGTGTG ATGGATATCT GCAGAATTCC AGCACACTGG CGGACGTTAC TAGTAGGATC TACCTCATCC ATCTACCTTC CCTACAACTA GATCTAGATT GTACCCACAG TACTTCAGAG AGCTGTAGCA TCTAAGATCG CCCGTATTAT AGCAGCACAC AACTAGCATC TACGACGCAC ACTAGATACG ATGCGCGTCA CATGGTAGCA TACTACACAC GCCAGATATA CATACATATC TATCATAACA TTAGAACTCA TATAGGAGGG ACACACCGCC GCAGATAGTG TCATAGTATA GTAACGCACT CCTCCACATA CAAACACNAC AGTTAGTACC TANTAGTCAG CACGAACTAA CATACAGACA CTACTCCGCA CGTCGTACAG GCGNATCACC CNACANGGNC ATATAGNCAG TAGGCCGAAT AAACGGCGTA CTGGCAGGCT TTACTATACC TAANNTTATG ATATGNTACC ACNCCNTTAC ANCAGTCACG GCCTAATGGA GGCAGCTNAA CATACTCACT ATGTGCTCCC ACTACACGAC ATTAGCTNTG TACACCTAGG CTAGCTAGGA CACACAGTAC GCGCAGGCAC GAGGTGGTNT CCACCACGCA CGACTGGTCA CACTCGCAGC CGGGCAACAT ATGGAACTAA CTACCACACA TCTGTTCGTA TCGAGCTCTG CTCATCTGCA CGCTATATAC ACACACACAA CTCGCAACAC AACACCGTCG CTATCATCCA CTAATACACT CAACATCATC ACCTAGAACA CACACACATC ACAACACACG ATCAACCGTA CCTGATAGTG GACGTGAGTG TAGCGACGTG CGTAGCAAGC ATAGGTAGAA TAGCTGGTGG ATAGCTTACA TGGATAGAGA GCTAGCTAGC AGACTACTAC GCACTAGCGT GAAGACAGAT GAAGTACGCT CAGTAGTGCT AGAGGCGTAG TGCGTAACGT AACGAGACGA GTCTATAGCG AGCTATGTAG AGCAGTCGAA GACAGTTCGC AGACTCGTAG CTGTGTCTAG TACTGCAACA CGACTGCAGC GGGAGTACAC GATGACTTGA GTACGAGAGG ATCTACGTCG CGGGACGACG CGACGAAGAG CGGCAGTCTG TAGCAACTAG TAAATAGGNC AGATAACACG TAATACAGAT CTATAACGTA AGATAGTGAG AGT // ID R25_0_0000286 standard; DNA; UNC; 962 BP. XX AC R25_0_0000286 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000286 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x008c11.f1; XX FH Key Location/Qualifiers FH FT source 1..962 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000286_A XX SQ Sequence 962 BP; 420 A; 256 C; 124 G; 162 T; 0 other; CGGGGAAATA GCAGTGAATT GTCATACGTG TCACTATAGG GCGAATTGGG CCCTCATAGA TACATGCTCG AGCGGCGCCA GTGTGATGGA TATCTGCAGA ATTCCAGCAC ACTGGCGGCC GTTACTAGTG GATCCGAGCT CGGTACCAAG CTTGATGCAT AGCTTGAGTA TTCTATAGTC ACCTAAATAG CTTGGCGTAA TCATGGTCAT AGCTGTTTCC TGTGTGAAAA TGCCGGGAGG TATAATCTAG ATACGACCGG GGAGGGTCCT CGCAGATAAG ACCGCGAAGG TTCATCCCCA TCCATCGAGA ACTGGAAGGG GAACACAACA TCACAAGAAA AGCATAATAA AAGAACAAAA ATAACAACTG CAAGAAACAA GAGAGCAAAA ATAAAGACAA ATAAATCAAA CCGTACAAAA AACTACTCCC TCATAAATAA ATAAAAAATA ACATCGAGCA AAGCAACACA ACTACATACA TCACACCAAA CCAGAACACA ACACTAAAGC AACAATATAA CAACACAAAC AGCACAAACA CAGCACACAA ACAACAACAT ACAAAACCAC AATACAAACA AAACAAACCA GAAACAATCC CTACCACATC CAGCCACACG AACATACCAC CTACAAACAC AACTAACCCT CCAGCACACA CTTCACACCC CACTAAACAA CAATCACCCA CACCACATAC ACCAGCCTCT ATCTATAGAA ACTACAATGA ACAAGACTAT TACCCAAAAA AACACCTCTA CTAACACATG AAAAACTCAC CTGCATACAA CGTCATACAA GACACATACA CATACAACAC TCGCAAACTA ACAATACATA TACTACAACT ACATAAACTA CACTTAACAA CACACACTAA AGTAAAAAAT ATTATATAAA CAAAAAACAT ACCATACAAA CAATATAAAA GCCATAAATA AAACAATCCA ACTACACTCC TA // ID R25_0_0000287 standard; DNA; UNC; 832 BP. XX AC R25_0_0000287 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000287 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x008d02.f1; XX FH Key Location/Qualifiers FH FT source 1..832 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000287_A FT misc_binding 109..142 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000287_1" FT /note="Base quality score is 1.2528e-03" FT misc_binding 142..175 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000287_2" FT /note="Base quality score is 2.8962e-04" FT misc_binding 175..208 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000287_3" FT /note="Base quality score is 2.5316e-04" FT misc_binding 208..241 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000287_4" FT /note="Base quality score is 8.1835e-04" FT misc_binding 241..274 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000287_5" FT /note="Base quality score is 1.3556e-03" FT misc_binding 274..307 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000287_6" FT /note="Base quality score is 2.2116e-02" FT misc_binding 307..340 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000287_7" FT /note="Base quality score is 3.6252e-02" FT misc_binding 340..373 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000287_8" FT /note="Base quality score is 1.8534e-02" FT misc_binding 373..406 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000287_9" FT /note="Base quality score is 1.5887e-02" FT misc_binding 406..439 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000287_10" FT /note="Base quality score is 4.6369e-03" XX SQ Sequence 832 BP; 256 A; 193 C; 158 G; 220 T; 5 other; TGTATACGAT TCACTATAGG GCGAATTGGG CCCTCTAGAC TCATGCCGAG CGGNCGCAGT GTGATGGATA TCTGCAGAAT TCCAGCACAC TGGCGGCGTT ACTAGTGGAT CTAGCTCGCT TCGGTGCCTG TCTTTATTTA GATCTAAGCT CGCTCACTGA TACTGCTTAC GTAGATCTAG TCACACGTGT GCTCTCGATA TGGGTAGATC TACATTCGGA AAGTAGGTTC GGATATCTAG ATCTAAATTC CAACCCTAGC CAAAGACCCA TAGATCTATG GCCGGGTCGA CCATGACACA CTTTAGATCT CATCTGAGCC GCCAGGCATA TGTAGCTAGA TCTATTCGGC CCGATTGCCG GCGTGTTTTT AGATCTAGCA CACAGGTTGT CAGATGTTTT TGTAGATCTA GTAGGGCAAT GAGGTCTCGC GATCGTAGAT CCGAGCTCGG TACCAAGCTT GATGCATAGC TTGAGTATTC TATAGTGTCA CCTAAATAGC TTGGCGTACT CATTGTCCTA GCTGTTTCCT GGTGTAAAAA AGCCAGCCAG GATACACCCA ACAACCGACG CCATTTTCAC CCATCAACAC TAGCAGTTAT AAAAAAATAA CGCAAATATC ATTCAATATA AGTATATCAA GTACTAGTGA CACATCGAAT GATAAACAAC AAAGAATAGT CTCAACACGA GACTACGTAC AAAACAGAAA ATATGATAAC ATAAATAACT ACACACCAGT ACACAAAGCA TAAACATAAT AGCTATCAAC TCACGACAAA TCATGATCAT CTCACATATC CTTCCTTATT ATATATATAC TAATCACANN NN // ID R25_0_0000288 standard; DNA; UNC; 908 BP. XX AC R25_0_0000288 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000288 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x008d03.f1; XX FH Key Location/Qualifiers FH FT source 1..908 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000288_A XX SQ Sequence 908 BP; 419 A; 246 C; 95 G; 148 T; 0 other; ATTTGGGCGT GTATACATCG GCAGTGAATT GTAATACGAG TCACTATAGG GCGAATTGGG CCCTCTAGAT GCATGCTCGA GCGGACGCCA GTGTGATGGA TATCTGCAGA ATTCCAGCAC ACTGGCGGCC GTTACTAGTG GATCCGAGCT CGGTACCAAG CTTGATGCAG CTTGAGTATT CTATAGTGTC ACCTAAATAG CTTGGCGTAA TCATGGGTCA AAGCTGTTTC CTGTGTGAAA AGCGCGCCAG GGTTCCTCCC AGTACACGCA CCGCCAGTGA TATTCACCCA GATACAGGAC CGAAAAGAAA TCGAACCACA CACGCACAAA AACAAAAAAA GAAACACCAA AAAACCCACA ACACACAAGC AAAAACCCCC AACACATAAC AAAAACAACA CCAACAAACA ACAACACACA ATAATAAGAA CAACTCCCAC TCACCCCATA CAAACCATAA TATCACATAT CACATCCACT TAACATACCA CACAAAAAAA AAATTAAAAC AACAAATCCC AAACACACAT CAAAACACAA ACCATAAAAC ACACACAGCA TACACACAAA AAACACACAA CCTACACCAA CAACAAACAT ACACATACAC ATTATATACC AATCATCAAT CTAACACACA ACAACAGCAA CCAATCAACA ACAACATATA AACTAAATAC ACAAAAAACA GATAAATCAT ACGAAACTAA CAACCAAATA ATAAAATCCA CAAACATTCA AAAAACCAAC ATTATCAATA CCATAATAAA AAATACAGAT AATACAACAA GAACATCAAA CAATATAATA ACTATTAACA AATAGACACT TAAACAACTA ACAAAAACAT ATACAAAAAC AACAAACACC TCACAACCTA CACCCACAAC AAATCACAAC ACCTAAAT // ID R25_0_0000289 standard; DNA; UNC; 885 BP. XX AC R25_0_0000289 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000289 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x008d05.f1; XX FH Key Location/Qualifiers FH FT source 1..885 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000289_A FT misc_binding 117..151 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000289_1" FT /note="Base quality score is 6.7022e-02" FT misc_binding 151..184 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000289_2" FT /note="Base quality score is 4.1062e-02" FT misc_binding 184..217 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000289_3" FT /note="Base quality score is 9.4223e-02" XX SQ Sequence 885 BP; 312 A; 191 C; 163 G; 219 T; 0 other; TGATTGTATA CGTGTCACTA TAGGGCGAAT TGGGCCCTCT ACGATACATG CTTCGAGCGG CGCCAGTGTG ATGGATATCT GCAGAATTCC AGCACACTGG CGGCCGTTAC TAGTGGATCT AGTAGGACTG AGCTCTTCTA GTCATCATAG ATCTAGGGAC TGGTATCAGG AAGGCCCTTG TAGATCTATG TCGATAGCAG CCTGGAAGAT GGTTAGATCT ACACCGTAGC GCTGTACCAG AAGGTCCCTA GATCCAATGC TCGGTACCAA AGCTTGATTG ATTATGCTAT AGAGTTATTC TAGTAGTAGT CACACTACAA TTATGCTCTG GGAGTAACTC AATAGCGTCA TTACGCTAGT TTACCTAGTA GTGAAACAGT GCGCCAGACC CAGGTGATAC TCGCCGACAC GACAAACTGA GCACAGCCGG GGGATACATC CCTGGTGCTG ATAGCTGGTT GTCTTGTTGA TAAAAAATTC ATCGAAGTGT ATCGCAGTGG TGTGAAACTA CACGGACAGA GTATATAACC AAGGTAAAAG AGTAAATAAA GACCACATCC TAATATAACA TATTTTCTAC TTTCATAGTC TAATAAAAAA AACACCAATT AGCACTAACC ACTTCACACC AAAATAACAT CTGAATAACA AGATGAAACT TTACCTACTC AATACATAAC GATTCTCTCA TACATCAACA TACATTAAGA TAAGCCAATA ACAACAGAAC ACAAATATCT CAAGATCCAC ATCTATCAGC CTATAATATA CAACCATGTA GAAGCATACA GCACCTCACG AATGACACTA TCAATGAAAA TAAGAAAACG AAAGTACTAA ATAAACATAA TATACGAACA CATAAAACTA TAACTAATGC TATAA // ID R25_0_0000290 standard; DNA; UNC; 946 BP. XX AC R25_0_0000290 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000290 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x008d06.f1; XX FH Key Location/Qualifiers FH FT source 1..946 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000290_A XX SQ Sequence 946 BP; 452 A; 239 C; 100 G; 153 T; 2 other; TGGTGAAAAT GACGCAGTGA ATTGTATACG ACTCACTATA GGGCGAATTG GGCCCTTAGA TGCATGCTCG AGCGGCGCCA GTGTGATGGA TATCTGCAGA ATTCCAGCAC ACTGGCGGCG TTACTAGTGG ATCCGAGCTC GGTACCAAGC TTGATGCATA GCTTGAGTAT TCTATAGTGT CACCTAAATA GCTTGGCGTA ATCATGGTCA TAGCTGTTTC CTGTGTGAAA AGCGCGAGAG GTATCACAGA GTCACGACCG TGAGGTTCTC ACCCAGATCA ACACCGAAAG TTATCAACCA TAAAATACGA CAGAACACAA ACCCACAAAA GCAAACTTAA GACACTCAAC CACAAAAACT CAAAAAAAAA ATCAGAAACA TATCAAACAA ATAAACACAA AAACAAAAAC CACAACACAT CACAATCACA ATGATGAAAC TCAACTAAAC TACTATAACC ATACACAACA AAAATCAAAA CTACACCTAT ATGTACAACC ACAGCATATA ACTACACAAA AAACTATAAA TACTAAAGAC AAAGAGCCAA TATCACAACT AAAATACCTT ATACATACCT TCAATAAAAA AAAATACATA TATCCTCTCA CACAAACAAT ACAACCACCA CCTAAATCAA ATATACAATC TAAACACGAC AAAACCAACA ACCCACCGCA TATAACAAAC AAAAAAGAAA AAAACAAAAC AAACGAAATT AACAAAACAA CAAAAAGAAC ACAAAAACAA ACAATACACA CCAACCACAC AACAACACAA CAAAAACCTA ACAAACACAC AAATCACTAG AACACATGAT ACACCAACAA AAACAATAAC ACACAACATC ACACCAACTA ACACAACAAA CTAAACTACA AAAGAACAAA ATTAACAAAG CTAATACACT ACTTANCANA CACACACAAC AACACAAACA AACCAA // ID R25_0_0000291 standard; DNA; UNC; 788 BP. XX AC R25_0_0000291 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000291 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x008e02.f1; XX FH Key Location/Qualifiers FH FT source 1..788 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000291_A FT misc_binding 130..163 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000291_1" FT /note="Base quality score is 1.7696e-02" FT misc_binding 163..196 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000291_2" FT /note="Base quality score is 1.0681e-02" FT misc_binding 196..229 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000291_3" FT /note="Base quality score is 3.8861e-02" FT misc_binding 229..262 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000291_4" FT /note="Base quality score is 1.9206e-02" FT misc_binding 262..295 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000291_5" FT /note="Base quality score is 5.1679e-03" FT misc_binding 295..328 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000291_6" FT /note="Base quality score is 6.0516e-03" FT misc_binding 328..362 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000291_7" FT /note="Base quality score is 3.6580e-02" FT misc_binding 362..395 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000291_8" FT /note="Base quality score is 1.6303e-02" XX SQ Sequence 788 BP; 295 A; 202 C; 129 G; 161 T; 1 other; GGGAAAAACG GCACTGNATT GTAATACGAC TCACTATAGG GCGAATTGGG CCCTCTAGAT GCATGCTCGA GCGGCGCCAG TGTGATGGAT ATCTGCAGAA TTCCAGCACA CTGGCGGCGT TACTAGTGGA TCTATGTACT ATCGCATTAA ACTGCTTCGT AGATCTATAT TACCACCTGG AGCGTAGCGG GTTAGATCTA ATTATCCTCC CCAGTTCCTA CCTCGTAGAT CTACGAATAT TTCACATAGG CTGCAACCTA GATCTAATTT ACTCAAGACG CCCCCTGCGC GTAGATCTAA CAAGATCGTT CGCTGAGATG ACTTTAGATC TAAGGGTGCG ATATTTCTGA CGCGAAGTAA GATCTATACA AGATAACCCC ACGCTTCCTC CTAGATCCGA GCTCGGTACC AAGCTTGATG CATAGCTTGA GTATTCTATA GTGTCACCTA AATAGCTTGG CGTACTCATG GTCATAGCTG TTTCCTGTGT GAAAACGCCG CCAGAGTTCA CCCCCGTCAC AGACTCGGCA GGTACACCCA GCTCAAATGC ACACATATAC CAATAAAAAA CAACACACAA CACCACCACC ACACTCAAAC CCACCACACA ACAAACAAAC AAACAACAAC AAAACAAAAA CACAAAACAA ACAGAAAGAA AAACAACAAT AAAAAAAAGA AAACAAATAA AAAAACATAA AAACACAACA AAATAAATAC ACAAACACAA GACAACACAC ATAAAATAAA AAAATCAAAA AACAAACAAG CAATACTCCT CTTCTGCG // ID R25_0_0000292 standard; DNA; UNC; 867 BP. XX AC R25_0_0000292 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000292 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x008e03.f1; XX FH Key Location/Qualifiers FH FT source 1..867 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000292_A FT misc_binding 133..166 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000292_1" FT /note="Base quality score is 9.6689e-03" FT misc_binding 166..199 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000292_2" FT /note="Base quality score is 2.8857e-03" FT misc_binding 199..232 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000292_3" FT /note="Base quality score is 4.1247e-03" FT misc_binding 232..265 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000292_4" FT /note="Base quality score is 6.0642e-02" FT misc_binding 265..298 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000292_5" FT /note="Base quality score is 6.8701e-04" XX SQ Sequence 867 BP; 315 A; 200 C; 168 G; 183 T; 1 other; CTACGGGGAA GACAGCAGTG AATTGTATAC GAGTCACTAT AGGGCGAATT GGGCCCTCTA GATGCATGCT CAGCGGCGCC AGTGTGATGG ATATCTGCAG AATTCCAGCA CACTGGCGGC CGTTACTAGT GGATCTACCC TGGTCAGGGA CCATAGGGAG TTTAGATCTA GTAAGGCACT GGCAACTCGT TATAATAGAT CTACGTGCAT GGTGATCTTG TGTGCTGCTA GATCTAAAGA GTGTCACTTG TATGGGATGG TTAGATCTAT ATATNAATTA CACACAGAAG GCGTTAGATC CGAGCTCGGT ACCAAGCTTG ATGCATAGCT TGAGTATTCT ATAGTGTCAC CTAAATAGCT TGGCGTAATC ATGGTCATAG CTGTTTCCTG TGTGAAAATG GCGCGGAGGA TCCCCCAGTC AAGAGCGCCA GAGAAACCCA AGTCAAGAGC GACAGAGAAA CCACAGTGCA GGAAAGATCA AGGAAAAACA GAGATGACAG ACGCAAAGGA GAATCACAAC ACACAAAGGA CCCGAACCGC GTACACTCCA CTAGTAACGG ACGTCACGTG ATCAGCACAT ACTGCAAAAT TACACTACAA CATAAAAAGA AAGATCAAAA CATTTATTTT AACATAGACA CAACAACATC CAATACCAGA TGTGAATCAA AATATACAAA ATCACAAGTA CAGACCATAC ACACACACCC TTCCACTGCA ATCCGTAATA ATCCTCAAGA TATAGAATAA ACACAACATA TCAACAACCA TAGTTCAACC ATACACAACA TAATACAACT AAAATAGCAA TACAAAACAT ACTCATGACC ATCAAATCAA ATCATCAACC AACACCATCA TCTTAAC // ID R25_0_0000293 standard; DNA; UNC; 810 BP. XX AC R25_0_0000293 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000293 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x008f02.f1; XX FH Key Location/Qualifiers FH FT source 1..810 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000293_A FT misc_binding 123..157 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000293_1" FT /note="Base quality score is 3.5219e-02" FT misc_binding 157..190 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000293_2" FT /note="Base quality score is 9.1078e-04" FT misc_binding 190..223 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000293_3" FT /note="Base quality score is 1.2567e-02" FT misc_binding 223..256 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000293_4" FT /note="Base quality score is 1.7584e-02" FT misc_binding 256..289 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000293_5" FT /note="Base quality score is 5.9420e-03" FT misc_binding 289..322 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000293_6" FT /note="Base quality score is 1.3303e-02" FT misc_binding 322..355 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000293_7" FT /note="Base quality score is 2.5796e-02" FT misc_binding 355..388 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000293_8" FT /note="Base quality score is 7.9990e-02" FT misc_binding 388..421 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000293_9" FT /note="Base quality score is 5.7540e-02" FT misc_binding 421..455 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000293_10" FT /note="Base quality score is 1.5231e-01" FT misc_binding 455..488 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000293_11" FT /note="Base quality score is 1.1633e-01" XX SQ Sequence 810 BP; 258 A; 220 C; 165 G; 167 T; 0 other; ATGATCGCAG TGATGTATAC GTGTCACTAT AGGGCGAATT GGGCCCTCTA GATGCATGCT CGAGCGGCGC CAGTGTGATG GATATCTGCA GAATTCCAGC ACACTGGCGG CGTTACTAGT GGATCTAGCC CAAACGCTGG TGTTCGGTAA ATGTAGATCT ACTGGATCAA AATTGGTACA GATCGCTAGA TCTATCTCAC ACTGAACGCC ACATTAAACT AGATCTATAA TGTCCCTCTT CGTGTACTCC AATAGATCTA AAACCCGGAC CAACCTCAAC TTGCGTAGAT CTACATGGGT ACGGTGGGTC CCCCGGAATA GATCTATACA TACCAAGCCG CACCGCCTGC TTAGATCTAA TGACCGTACC GAGACACTAC GTAGTAAATC TAGCAACGAG TGGAGCCGCA TCCTAAGTAG ATCTAAAGTA CGCTCGCCAC TTCCAAAAGT GTAGATCTAG CTACGAAGTA CCTAATGTGT AGTATAGATC CGAGCTCCGT ACCCAGGCTT GATGCATAGC TTGAGTATTC TATTAGGTGT CACCTAAATA GGCTTGGGGT AATTCTTGGC CTAGCTATTT CCTTGTTGAA AGCGCCGAGG GTTCCGACAC ACACACAAGG TATCCCAAGT AACACGATAG GGATACAACA AAACGCCCAC ACAATACAAA CGAACAACAC GCGAAACACT AACACACAAA CAACAAGCCA ACACAACACG CACAACAACA CAACAACAGC CACAACAACA CAACAACACC GGAACAAGCA CCACACAGAC GACACAGCTC TACACTGAGC GACGACCCTC // ID R25_0_0000294 standard; DNA; UNC; 829 BP. XX AC R25_0_0000294 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000294 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x008f03.f1; XX FH Key Location/Qualifiers FH FT source 1..829 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000294_A FT misc_binding 128..161 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000294_1" FT /note="Base quality score is 4.8208e-04" FT misc_binding 161..194 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000294_2" FT /note="Base quality score is 1.5355e-04" FT misc_binding 194..227 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000294_3" FT /note="Base quality score is 5.3125e-05" FT misc_binding 227..260 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000294_4" FT /note="Base quality score is 5.1235e-05" FT misc_binding 260..293 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000294_5" FT /note="Base quality score is 4.4112e-05" XX SQ Sequence 829 BP; 277 A; 183 C; 218 G; 151 T; 0 other; CGCTGTAAAA AGCAGGAATG TCTACGATTC ACTATAGGGC GAATTGGGCC CTCTAGATGC ATGCTCGAGC GGCGCAGTGT GATGGATATC TGCAGAATTC CAGCACACTG GCGGCCGTTA CTAGTGGATC TAATCATTTG GTAGGATCCA GGCAGGCTAG ATCTATCTGG CCATGGTTTG GTCTCGCGTT TAGATCTAGA CAGATGTTTT GGTCCGTGAT ACCTAGATCT ACACTTCATC TTAGCCGGTA ATCGTATAGA TCTACTTAGG AGCCTTCCCC ATTCGGCTAT AGATCCGAGC TCGGTACCAA GCTTGATGCA TAGCTTGAGT ATTCTATAGT GTCACCTAAA TAGCTTGGCG TAATCATGGT CATAGCTGTT TCCTGTGTGA AAAGGGCGCC AGGATCACCA CAGACACGAG CGCGAGGGTA CCCACCAGTC AAGAGAGAAC AGAATCAACC CACAACGACA AGAAAAGCAC AAACAAACAC AACCAAAGCA GACGACGAAC AACAGCAACA AACAAAAAAA ACACAAACAC GCAGAACGCA AAAACACACA CAAGAGAAGC AAACAAGAAA AAACAGAAAA AGATATCACA CCGCAAAGGT AAGGAGAATA AGAAGAAAGG AAGCAGAGGC TGGGGATACT GGAGAGGCCG TAACTGGACG GGATTAGAAG GACGGAAGAG GCGGGCATAT CCTAGAACAT CACGACAGAA TGCAGTGTGC GAGGGACAGA GATATGACGG CGGTGAATTT GTGAGTACGC AGTGAGTAGC ACGCGGGAAC CCAGAGCACG GGCGAACGCA GCGTTAGAGG GACCCATAT // ID R25_0_0000295 standard; DNA; UNC; 863 BP. XX AC R25_0_0000295 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000295 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x008f04.f1; XX FH Key Location/Qualifiers FH FT source 1..863 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000295_A XX SQ Sequence 863 BP; 391 A; 180 C; 147 G; 145 T; 0 other; GGCGCGTAAT ATCGCAGGAA TGTATACGAT GTCACTATAG GGCGAATTGG GCCCTCTAGA TGCATGCTCG AGCGGCGCCA GTGTGATGGA TATCTGCAGA ATTCCAGCAC ACTGGCGGCG TTACTAGTGG ATCCGAGCTC GGTACCAAGC TTGATGCATA GCTTGAGTAT TCTATAGTGT CACCTAAATA GCTTGGCGTA ATCATGGTCA TAGCTGTTTC CTGTGTGAAA AGCGCGAGAG GTTTTCCCCG AGCTCACGAC GCCGAGCGAG GTTACAACCC ACGATGAAGC GAGCGACCGA CAGCATTATA CCCCTGCATC GATACGACCG TAAAACAGGA GACACAAGAA GAACAACACG CACCACACAA CATCACAAAA AAAACATACA CAAAACCGAG AGACAAACCA TAACACCAAC ACTAGTCATA TCAAAAACCA CACAATATAC AAGACACGAG ACGAGAGGAA ACAAGACAAC ACAGATAGAA ACTAAAAACG AACAAGAACA AAAAGAAAGA GAAAAAAACG CACTACAATA AAAGAAAACA ACAGAACAAG AACTAATGAC GAACATTGGT AATATTAAAA AAAAAACAAA GAAAGACGGA ACAAGAAGTA GACTGTATAA ACGAAGCAAA ATGGTGGAAA AATTAACAGC AGGAACGAAA AACCAAGAAC AATGAAATAT AAAGTACATA CATAACACAA TCCTAACAAA TATAAAAAAA ATAATAGATA TAAAATACAA ACAAAACAGC AAACCTACAA AAACTACATT AATATCTAAA TAACTTACAA TATAACCACA ACTATTAACT AAACATAACA ACAAAAATAA TAAAATAAAA CACAATCCAT ATT // ID R25_0_0000296 standard; DNA; UNC; 876 BP. XX AC R25_0_0000296 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000296 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x008f05.f1; XX FH Key Location/Qualifiers FH FT source 1..876 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000296_A FT misc_binding 127..160 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000296_1" FT /note="Base quality score is 3.1852e-03" FT misc_binding 160..192 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000296_2" FT /note="Base quality score is 2.2775e-03" FT misc_binding 192..225 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000296_3" FT /note="Base quality score is 1.6251e-04" FT misc_binding 225..258 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000296_4" FT /note="Base quality score is 6.8915e-05" FT misc_binding 258..290 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000296_5" FT /note="Base quality score is 2.1646e-03" FT misc_binding 290..323 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000296_6" FT /note="Base quality score is 1.0740e-03" FT misc_binding 323..356 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000296_7" FT /note="Base quality score is 1.8555e-03" FT misc_binding 356..389 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000296_8" FT /note="Base quality score is 3.1186e-03" FT misc_binding 389..422 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000296_9" FT /note="Base quality score is 5.5148e-02" FT misc_binding 422..455 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000296_10" FT /note="Base quality score is 2.6789e-02" XX SQ Sequence 876 BP; 287 A; 224 C; 176 G; 183 T; 6 other; GATAATACGG CAGTGAATGT ATACGATTCA CTATAGGGCG AATTGGGCCC TCTAGATGCA TGCTCGAGCG GCGCCAGTGT GATGGATATC TGCAGAATTC CAGCACACTG GCGGCGTTAC TAGTGGATCT AATAACTGAT CAAAGCCCCC ACCACCTAGA TCTATTGATT TTTTATTGCA CTGGGGAGTA GATCTACACC ACGCACAGAC CTACCATCAT CTAGATCTAG GCCATGGAGA GCACCAAAAG GAAATAGATC TACGAACTCT AGCCCCTTTG GTCCCATAGA TCTACGATGG GTGGATAAAA CTGGCAACCT AGATCTACAA AAAACATAAG CCGGCTATAC CCTAGATCTA CGTGTATTGT GGTGCTCGAG CTATCTAGAT CTAAGGACCC GGGGCCCACT CATAGGACTA GATCTAGCAT TTTATGTGGC CAATGCCTAT GTAGATCCGA GCTCGGTACC AAGCTTGATG CATAGCTTGA GTATTCTATA GTGTCACCTA AATAGCTTGG CGTACTCATG GTCATAGCTA GTTCCTGTGT GAAAAGCGCG CCAGGGTTCC CCCAGTCAAG ACCCGCAAGG GTTACCACCA AACAACAAAA GAAGGGTTAC AACAACACCA GCCGACAATG CACAAAACAA CCACAGGCAC ATCTACTACA ACACATAAGA CATAGACTAA ACAGACAAAC AAACGAGACA GAGCACCTAG CACATAGAGA GACCAAACAA CTGCAACACA ACACACAGCA GACAAAGATA ACTACACAGG ATCACAAGAA CGAACTAACA GATAATAAAC TCCCTTAGTT GCTGCTCTTC TCCCTCTGCT TCCACCCATC AGCAAGTTNN TNANNNAAGC AAAGAA // ID R25_0_0000297 standard; DNA; UNC; 845 BP. XX AC R25_0_0000297 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000297 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x008f08.f1; XX FH Key Location/Qualifiers FH FT source 1..845 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000297_A FT misc_binding 123..156 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000297_1" FT /note="Base quality score is 1.0137e-03" FT misc_binding 156..189 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000297_2" FT /note="Base quality score is 2.8722e-02" FT misc_binding 189..222 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000297_3" FT /note="Base quality score is 1.2759e-03" FT misc_binding 222..255 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000297_4" FT /note="Base quality score is 8.9336e-03" FT misc_binding 255..288 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000297_5" FT /note="Base quality score is 1.1262e-02" FT misc_binding 288..321 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000297_6" FT /note="Base quality score is 1.7213e-03" FT misc_binding 321..354 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000297_7" FT /note="Base quality score is 5.5911e-03" XX SQ Sequence 845 BP; 245 A; 234 C; 108 G; 254 T; 4 other; TACGCAGTGA TGTACTACGA GTTCACTATA GGGCGAATTG GGCCCTCTAG ATGCATGCTC GAGCGGCCGT CAGTGTGATG GATATCTGCA GAATTCCAGC ACACTGGCGG CGTTACTAGT GGATCTAACA GCACAACACA GCATAATTAC TCTAGATCTA CACTTACCTG TGCAGCCTAC ATTTTAAGAT CTACTCCTTT CCATTGTTCT ATTCATGCTA GATCTACTCC CGCTATTTCT CTCACATATC GTAGATCTAA GCTCGCCAAG CCGCCCCCTC ACAATAGATC TAGGTCAGTG AGCGTTTAAT ATAGGATTAG ATCTATCAAG AGCGCCCTTC CATTCACCTG TAGATCCGAG CTCGGTACCA AGCTTGATGC ATAGCTTGAG TATTCTATAG TGTCACCTAA ATAGCTTGGC GTAATCCTTG TCATAGCTGT TTCCTGTGTG AAAATCCCGC CAGTTTTCCC CAATGTAACC ACCAGCCAGT TTATCTCCCA TCATAACTAA CCGACATTTT TTACCTAATT ACAAAAGAAA ATAGTTACTA CATCATTCCA CACTCACTTT ATTCTTCTCT TCACTCTCTA CACTCATATA TATACATACT TCACTACCTA TTCATCACCA ACTTATACAA TTACTCATCA TCTATACTAC CATAAAAAAT TAAGCACTTA CGCTCATACC AACTATAAAC AACACATTCA GTCACACACA AATCATATTA TAATATAACT ACGACATATC AACTTCACAT CACATCTCTT ACATCACACA CCCCGACATA TCTACTCTTT TTCACTTCCT CTTCATCTTT TTTCATCAAC NNNGACGCAA CGCGN // ID R25_0_0000298 standard; DNA; UNC; 854 BP. XX AC R25_0_0000298 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000298 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x008f10.f1; XX FH Key Location/Qualifiers FH FT source 1..854 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000298_A FT misc_binding 128..161 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000298_1" FT /note="Base quality score is 4.6110e-03" FT misc_binding 161..194 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000298_2" FT /note="Base quality score is 7.9475e-04" FT misc_binding 194..227 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000298_3" FT /note="Base quality score is 1.1503e-03" FT misc_binding 227..260 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000298_4" FT /note="Base quality score is 4.0411e-03" FT misc_binding 260..293 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000298_5" FT /note="Base quality score is 1.5698e-02" FT misc_binding 293..326 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000298_6" FT /note="Base quality score is 3.0591e-03" FT misc_binding 326..359 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000298_7" FT /note="Base quality score is 1.2256e-03" FT misc_binding 359..392 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000298_8" FT /note="Base quality score is 2.4941e-03" XX SQ Sequence 854 BP; 235 A; 223 C; 220 G; 176 T; 0 other; GAGGGGGAAT AGGCCATGAC TGTAACGAGT CACTATAGGG CGAATTGGGC CTCTAGATGC ATGCTCGAGC GGCAGCAGTG TGATGGCTAT CTGCAGAATT CCAGCACACT GGCGGCGTTA CTAGTGGATC TAATACCCGC TCATTTCCAC AATGGGATAG ATCTATGGGG TAATAACGGG AGCAGACAGG TAGATCTATC CACCCCCGTT CCCCTACCCC TGTTAGATCT AACTGTCGGC ATCCCGGTTA ACCGCCTAGA TCTATTGACG CTCGGGGCCC ATGCAGGTGT AGATCTAGTC ACTTACCCAA AGGCCCCCCC AGTAGATCTA GGGGCTCTTT AGTTCGTGAC GGTATTAGAT CTACCGAGGT TGAGCTCTAG GAAGCTCTTA GATCCGAGCT CGGTACCAAG CTTGATGCAT AGCTTGAGTA TTCTATAGTG TCACCTAAAT AGCTTGGCGT ACTCATGGTC ATAGCTGTTT CCTGTGTGAA AATCCCGCCA GGGTTCCCCC AGTCAACGAC CGCCAGTGTC CACACAGTCA AAACCGCCCA GGTTTCACAC CCAACACACA CACCAACACA CACAACATCA ACGCCAGGAC AGGCACACCG AAGATCACCA CAGACATGAT GTGACACGGA TCTCTAGTAG GAGAGTGGGG CGCGAGCAGA GCGACACGAA GTAAGCGGCG TCACTGTGTC GGAATAGTAC TATCTATCGA CGGCGGAGCT CTACACTGCA CGCAGGAAAC GGACAAAAGA AGAAGAAGAG ACCAAACGAA CGCAGACACA AAGATAATAA TAAGGGTAAG CTGCAGTTGA TTTGACTGCG TAGTCCGCGT CGGGCAGGGA CTAT // ID R25_0_0000299 standard; DNA; UNC; 1091 BP. XX AC R25_0_0000299 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000299 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x008g05.f1; XX FH Key Location/Qualifiers FH FT source 1..1091 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000299_A XX SQ Sequence 1091 BP; 490 A; 260 C; 93 G; 244 T; 4 other; TTGTATACGA CTTACTATAG GGCGAATTGG GCCCTCTAGC ATACATGCTC GATGCGGCGC AGTAGTGATG GATATCTGCA GAATTCCATG CACACTGGCG GCGTATACTA GTGGATCCGA GCTCGGTACC AATGCTTGAT GCATAGCTTG AGTATTCTAT AGTGTCACCT AAATAGCTTG GCGTAATCAT GGTCATAGCT ATTTCCTGTG TGAAAATGTC GCCAAGAATA CCACTTAGTA CACTACTCGA CGAGTATTAA CACCGAGATA TCAACACACA ACCATCTTAC TTACTAAACC ACAACACACC TCCACAAACA AACACTCGTA ACATAAATAC ATACATACAT ATCAATATGA TATCAAACTG AATATTACAA TACACACAAA AATAACACAC AAACAACACA CAAAAACACT ATAATAAAAA ACAAAATAAC CAATAAACAT ACAACACACA ATATATCATA CTCTCACATA ACAAAATATC AATAAAATCA TCACACAAAT AATCAACCAC TCATACTCAC TAACGAACTC ATTACATATA AACAACACTT CATACACACT AATATACACA ATAAACACAT AAACAATAAC ATAGATAAAA CAATTCTCAA ACCATTATCT ACACCAAACA ACTATCGAGT ATCATCATAA CATACTTTCA ACACAAATAA TATAAAATAC ATAACAAGTA AAAATATATA AAATATTATA AAAATATACA TAATAAATAT ATACAATATA AACATAAATA ATAAATTCAG ACAAACATCT CACAACACGT AACCAGACAA CAAATCACTA TACGTATATA TACACTACAT ACAGAAAAAC AAACAAAAAC CACTAGAAAA CACAAACAAA ATAATACAAA AAAAACAGAA ACAACTAACA CTAACAAAAA ATGCCTAAGA ATCTAAAACC AATCTAACAT AACAAACATC TCAAAAATAA ACCAGCAACA ACAACGGAAC ACCAATCACT GAACCTACTA TACTGCTCCT CTCTCCTTTC TCTCCACCTC CCTTCTCTTT TTATTCTTAT TANNCNNCGG CAACGGTCAA GCCAATAACA ACAACGACAG G // ID R25_0_0000300 standard; DNA; UNC; 758 BP. XX AC R25_0_0000300 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000300 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x008h01.f1; XX FH Key Location/Qualifiers FH FT source 1..758 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000300_A FT misc_binding 140..173 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000300_1" FT /note="Base quality score is 3.1214e-03" FT misc_binding 173..206 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000300_2" FT /note="Base quality score is 2.8169e-03" FT misc_binding 206..239 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000300_3" FT /note="Base quality score is 3.0717e-02" FT misc_binding 239..272 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000300_4" FT /note="Base quality score is 3.7693e-02" FT misc_binding 272..305 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000300_5" FT /note="Base quality score is 1.0994e-02" FT misc_binding 305..338 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000300_6" FT /note="Base quality score is 8.6644e-03" FT misc_binding 338..371 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000300_7" FT /note="Base quality score is 2.0733e-02" XX SQ Sequence 758 BP; 231 A; 224 C; 123 G; 180 T; 0 other; GGGAGTCGCG GATGTAACGA GTTCACTATA GGGCGAATGG GCCCTCTAGA TCATGCTCGA GCGGCGCCAG TGTGATGGAT ATCTGCAGAA TTCCAGCACA CTGGCGGCGT AACTAGTAAT TAACGGAGTC GGTTAGGAGA TCTACATTAT AAGCGTACCA TTAAATTTTT AGATCTACTC TTAGAGTGAT GCGATCGGCG ACTAGATCTA ACATAGCCAT ATCGCGGTTA CGACGTAGAT CTAAATAACC CGGAACTGCG AACGCCCCTA GATCTAAATA CACAGCACCC AATTCCTCCC CTAGATCTAG TCGAGGCGTC TTGCGGTGGA CTTTTAGATC TATTTTATAT CCCAATCTAT CGACTCTTAG ATCCGAGCTC GGTACCCAAG CTTGATGCAT AGCTTGAGTA TTCTATAGTG TCACCTAAAT AGCTTGGCGT AATCATGGTC ATAGCTAGTT CCTGTGTGAA AATGCCGCCA GGTATCCCCC AGACACGACC GCCAGGTATC CCCCCACCCA ACACTACAAC GAATACACCT CCACACACAC CTTCCCCTCC ACACAAATCC CACCCCACAC GACAATCCTA CACAGCTAAC AAACCTATAT TCACTCTACC AACACAATGC ACTATCTACC CTACATCCAA ATTTATACAC AACGACTCAC ACTATCACAA TAATTATTCA CTCCAATCAT AACAAACTCC ACTCCATATT ACACTAACCA AACATCTCAA ACAACACACA CACTATCC // ID R25_0_0000301 standard; DNA; UNC; 892 BP. XX AC R25_0_0000301 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000301 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x008h02.f1; XX FH Key Location/Qualifiers FH FT source 1..892 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000301_A XX SQ Sequence 892 BP; 380 A; 256 C; 94 G; 162 T; 0 other; AGGGCGGTAC ATAGCAGTGA ATGTATACGA CTCACTATAG GGCGAATAGG GCCTCTAGAT ACATGTCGAG GCGCCAGTGT GATGGATATC TGCAGAATTC CAGCACACTG GCGGCCGTTA CTAGTGGATC CGAGCTCGGT ACCAAGCTTG ATGCATAGCT TGAGTATTCT ATAGTGTCAC CTAAATAGCT TGGCGTAATC ATGGTCATAG CTGTTTCCTG TGTGAAAAGG CCGCCAGGGT CCCACCAGCC ACGACCGACA GGGTCCACCC AAGACACGAC CGCCAGATAA CCCCCCAACA CAACAACACA GAACATGCTC CCACACACCC CTCACCCAAG ACGCCCCACA CACCCCCACC CACACCGCCA CCCCACAATA CAAAACAACA CAAAAACCTC TAACCCCCCC CACAACTAAT AAATAACAAC ACACAAAAAA ACAAAATAAA ACAAAAAATA CAAACAACAC AACTACAATC CAAACAATAC CAACAATTAC TAAATACATA TATACCTCTT AATCAAACTA CACACTCCAC CTACACACTA CGCAACAACA AAGACAACAT ATAATCAACA ACATCAACCA ACTCACAATA ATAATACCTA TATACATCAT AAAATAAATA ATAAACAAAA TACTACTCCA TAAGCGACAT AAACTAACCA AAATAATACA TAAAAATAAT CTAACCTGAC ACAGTATTAC AACATACACC AATCAAAAAA TAAATACAAA ATACACAAAG AATAAAATCA CCACACACAA CCTAACATTT TATTAACATA ATCACACCAA AGACCACCAA ACTAACATAC ACTAAAAAAA ATACAATATA CCATGAACGT ACTAATAACA TCTACTAACA TCTATCAATC TAACTAGTCT AT // ID R25_0_0000302 standard; DNA; UNC; 429 BP. XX AC R25_0_0000302 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000302 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009a01.f1; XX FH Key Location/Qualifiers FH FT source 1..429 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000302_A FT misc_binding 135..168 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000302_1" FT /note="Base quality score is 9.1578e-03" FT misc_binding 168..201 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000302_2" FT /note="Base quality score is 1.3953e-02" FT misc_binding 201..234 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000302_3" FT /note="Base quality score is 3.2184e-02" FT misc_binding 234..267 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000302_4" FT /note="Base quality score is 2.7024e-02" FT misc_binding 267..300 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000302_5" FT /note="Base quality score is 6.3526e-02" FT misc_binding 300..333 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000302_6" FT /note="Base quality score is 4.8172e-02" FT misc_binding 333..366 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000302_7" FT /note="Base quality score is 7.6374e-02" XX SQ Sequence 429 BP; 115 A; 88 C; 111 G; 115 T; 0 other; CACCGCTGAA TAATCGCAGT GAATTGTATA CGACTCACTA TAGTGGCGAA TTGGGCCCTC TAGATGCATG CCGAGCGGCG CCAGTGTGAT GGATATCTGC AGAATTCCAG CACACTGGCG GCCGTTACTA GTGGATCTAA CAAGTAAGTA TCACATAATG ACAATAGATC TAACACTAAT TCGATGCTAG GGGCGAGTAG ATCTAGAAAT TGGGAGGAGG ATGTGTCGTA TAGATCTATG TGCGTCTGTA AATCGACTTA TGGTAGATCT ATCAGTGGGG ACTCTCAGCG CGCATGTAGA TCTATTTGGG TCGTTGATGG GTGCGGTTCT AGATCTACCC CAAGATCGAG CATTGAACCC ATTAGATCCG AGCTCGGTAC CCAAGCTTGA TGCATAGCTT GAGTATTCTA TAGTGTCACC TAAATAGCT // ID R25_0_0000303 standard; DNA; UNC; 827 BP. XX AC R25_0_0000303 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000303 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009a11.f1; XX FH Key Location/Qualifiers FH FT source 1..827 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000303_A FT misc_binding 124..157 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000303_1" FT /note="Base quality score is 2.0521e-03" FT misc_binding 157..190 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000303_2" FT /note="Base quality score is 1.5090e-03" FT misc_binding 190..223 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000303_3" FT /note="Base quality score is 1.2189e-03" FT misc_binding 223..256 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000303_4" FT /note="Base quality score is 1.5566e-03" FT misc_binding 256..289 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000303_5" FT /note="Base quality score is 3.3832e-03" FT misc_binding 289..322 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000303_6" FT /note="Base quality score is 4.0388e-03" FT misc_binding 322..355 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000303_7" FT /note="Base quality score is 4.5233e-02" FT misc_binding 355..388 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000303_8" FT /note="Base quality score is 2.3241e-02" FT misc_binding 388..421 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000303_9" FT /note="Base quality score is 1.3537e-02" FT misc_binding 421..454 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000303_10" FT /note="Base quality score is 2.6097e-02" XX SQ Sequence 827 BP; 249 A; 203 C; 201 G; 169 T; 5 other; GTCCTACTCG CAGTGATGTA TACGACTCAC TATAGGGCGA ATTGGGCCCT CTAGATCATG CCGAGCGGCG CCAGTGTGAT GGATATCTGC AGAATTCCAG CACACTGGCG GCGTAACTAG TGGATCTATC TCTGTTTAAG AGTGTGGGTG TTGTAGATCT AACGCTTCAT GTTGGGCGAG TGGTAGTAGA TCTACTAACC AGCCATCACG AGCCCACGCT AGATCTAAAA AAAGCGATCG CGACCTCCCC GATAGATCTA CACCGAGTAG AACCCGCAGC ACAACTAGAT CTATCGCAAC CATTCACCGT GCGCCGAGTA GATCTAGGGG GGGGCACAGG AGCGCTAGAG TTAGATCTAC CCCAATACAT TCCACCTATC AAATTAGATC TAGGACAAGT GTCTTGTTGA TGGGATTTAG ATCTAATTAC AGTAGGTGCT GGGTGGATAA TAGATCCGAG CTCGGTACCA AGCTTGATGC ATAGCTTGAG TATTCTATAG TGTCACCTAA ATAGCTTGGC GTAATCATGG TCCTAGCTGT TTTCTGTGTT GTATGCCCCG CAGGATTCAC ACAACAAGAC AGCACAGAAC ACCAAAGAAA GGACGGTAGA ACTCCCGGAG CGGATCACCA ACGAAACGAG CAGAACATGC CGACGGGATA CTATACACTC AACGGACAGA TAAGAAACTA CATACACAAC ACGAGGCAGA CCACCAACAG GAAAAGCTAG GAACGGGCCC ATACAGCAGC TGAATCTAGA CAATAGCTAA GACAGCAAGC TAACAACAAC CTACGGAGGA AGCAACGCCG CCTGTCCACG NNAGNNN // ID R25_0_0000304 standard; DNA; UNC; 432 BP. XX AC R25_0_0000304 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000304 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009a12.f1; XX FH Key Location/Qualifiers FH FT source 1..432 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000304_A FT misc_binding 111..145 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000304_1" FT /note="Base quality score is 2.8787e-02" FT misc_binding 145..178 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000304_2" FT /note="Base quality score is 4.3039e-02" FT misc_binding 178..211 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000304_3" FT /note="Base quality score is 3.4604e-02" FT misc_binding 211..244 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000304_4" FT /note="Base quality score is 2.5795e-02" FT misc_binding 244..278 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000304_5" FT /note="Base quality score is 3.5453e-02" FT misc_binding 278..311 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000304_6" FT /note="Base quality score is 6.0688e-02" FT misc_binding 311..344 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000304_7" FT /note="Base quality score is 7.0661e-02" XX SQ Sequence 432 BP; 115 A; 79 C; 119 G; 119 T; 0 other; TGTATACGAT GTCACTATAG GACGAATTGG CCCTCTAGAT GCATGCTCAG CGACGCCAGT GTGATGGATA TCTGCAGAAT TCCAGCACAC TGGCGGCCGT ACACTAGTGG ATCTATGGGA AGGGGAGTCT TATCCAGGTG TAGCATCTAC GAGTCCACCG GCTCAAAATC AATTTAGATC TCTCGATAGG TTAGGGGGGG GTAAATATAG ATCTAATAAA AATCGTCAGG CGGAGAACAG TAGATCTAAG TGGTCTAAGG CACCGCGGGA TGGGTAGATC TAGTTGCGTG GTGGTATGAC TCTTTTTTAG ATCTAGGGGT ATTGATATCG GGGAACTGAA TAGATCCGAG CTCGGTACCA AGCTTGATGC ATAGCTTGAG TATTCTATAG TGTCACCTAA ATAGCTTGGT GTAATCTTGG TCATAGCTAT TA // ID R25_0_0000305 standard; DNA; UNC; 932 BP. XX AC R25_0_0000305 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000305 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009b08.f1; XX FH Key Location/Qualifiers FH FT source 1..932 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000305_A XX SQ Sequence 932 BP; 413 A; 254 C; 135 G; 129 T; 1 other; NAAAAAAAAA AAAACAAACT GGTTATAACG GCAGTGATTG TATACGACTC ACTATAGGGC GAATTGGGCC CTCTAGATGC ATGTCGAGCG GCGCCAGTGT GATGGATATC TGCAGAATTC CAGCACACTG GCGGCCGTTA CTAGTGGATC CGAGCTCGGT ACCAAGCTTG ATGCATAGCT TGAGTACTAT AGTGTCACCT AAATAGCTTG GCGTAATCAT GGTCATAGCC TGTTTCCGTG TATGAAAACG GTAGTGAGAC AAACACACAA AACACAGACA GACCGCACCA CACCACAGCA ACGACAAGAA ACACACACCA ACACCAACGA CACAACCACA CAACACACAA ACAACACAAC GAAACAAACA AGAAAAACAA CACACAACAA CGACAAAAGC AAAACACAAA ACAACAACCC CACCACCATA AGAGCAGAGC AGAAGAACAA CAAAAGCACA AATCCCGATA GCACAGCCGA CGACACGCCA CGCAAACAAG CAGCCGGGAG TGCTACGCTA CAAACAGAAC AGCAAACAAA CAACAACATC AAACAAGAAC AGAAGACGAA ACAGCAAACC ATAGCGAAAG CAATACACGA AGATGAGGAG AACACACTTA AGCGCGCGAT AGAGATAAAC TCCACTAACA ATACTAGTCA ACGCATAACA CCACAAAACA AACGACAACG CACCATATTC CAAACACCAA AGTCACACAC ATATACAATT ACCATTACCA ACACCTTTAT AACACACTAC TAACAAACAA CATCATTACA GATCATTCAA AACATAATAT ATAACCAAAA TAAACAACAT ACCAAGAACC ACACACCACA AATATCACAT AAATCAACAA AACAACACAC GACAATGTAT CAAACACACA CCACTACATA GCTAATTAAC CTGATAATTA CAACACAGTA CG // ID R25_0_0000306 standard; DNA; UNC; 814 BP. XX AC R25_0_0000306 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000306 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009b10.f1; XX FH Key Location/Qualifiers FH FT source 1..814 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000306_A FT misc_binding 131..164 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000306_1" FT /note="Base quality score is 8.5452e-03" FT misc_binding 164..197 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000306_2" FT /note="Base quality score is 3.7548e-02" FT misc_binding 197..230 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000306_3" FT /note="Base quality score is 4.1233e-02" FT misc_binding 230..263 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000306_4" FT /note="Base quality score is 5.5975e-02" FT misc_binding 263..296 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000306_5" FT /note="Base quality score is 1.5247e-02" FT misc_binding 296..329 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000306_6" FT /note="Base quality score is 5.1630e-02" XX SQ Sequence 814 BP; 251 A; 193 C; 163 G; 206 T; 1 other; AACAGATTAA CACGCAGTGA TTGTNTACGA CTCACTATAG GGCGAATTGG GCCCTCTAGA TGCATCTCGA GCGTGCGCCA GTGTGATGGA TATCTGCAGA ATTCCAGCAC ACTGGCGGCG TTACTAGTGG ATCTAGTCAC TGAAAATTTT TGTAACACCT TAGATCTAAA TTTTTTGATA GGAGGGTGGA TTGTAGATCT AATTGTGGCG GCCCATGGGG GTTAATCAGA TCTAGGCGAC CTCACCTCCC TGCCCCGGAT AGATCTATTT CGCTGGCACT TTCAATCTTA TTTAGATCTA TCTTCAACCC CCTTATATCT CGGTTAAGAT CCGAGCTCGG TACCAAGCTT GATGCATAGC TTGAGTATAC TATAGTGTCA CCTAAATAGC TTGGCGTAAT CATGGTCCAT AGCTGTTTCC TGGATTTAGC CCACCTATTA CAACCACAAC CCACTCAGAA CCTCCCATAT ACACCACATA AAACATAAAC CCAAATCACA ACTCATACTC AAACACACCA AAATATATAA TAACAAAAAC AACACACCCA ACAACACACT ACCACAACAA CTAAACAACC GAGATAATCT GAGTGATACA GGAAGCAGAG AAGTCGCTCC TGATCAGCAA ACTTGATCGC ATAGAGTAAT ACTATTGGAA AAGGCAAGAG TCGGAGTGGT GTTAGTGAGT CTGGGCGGTA CGTATGTCTG CTGCGCCAGT TCATTCGATA AGGCACTGGT ATGAGCTAGA TAGATAGCAA TATGCAGACC GAGTATCTCT CGTGCACAGC ATCAAATAGT GAATTTACAG ACTC // ID R25_0_0000307 standard; DNA; UNC; 590 BP. XX AC R25_0_0000307 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000307 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009b12.f1; XX FH Key Location/Qualifiers FH FT source 1..590 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000307_A FT misc_binding 129..162 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000307_1" FT /note="Base quality score is 3.6114e-02" FT misc_binding 162..195 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000307_2" FT /note="Base quality score is 1.0345e-02" FT misc_binding 195..228 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000307_3" FT /note="Base quality score is 6.4475e-03" FT misc_binding 228..261 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000307_4" FT /note="Base quality score is 3.1978e-02" FT misc_binding 261..294 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000307_5" FT /note="Base quality score is 1.1384e-02" FT misc_binding 294..327 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000307_6" FT /note="Base quality score is 3.6866e-02" XX SQ Sequence 590 BP; 171 A; 154 C; 134 G; 131 T; 0 other; TCACGACGTC ACCCGCAGTG ATGTATACGA GTCACTATAG GGCGAATTGG GCCCTCTAGA TGCATGTCAG CGAGCGCAGT GTGATGGATA TCTGCAGAAT TCCAGCACAC TGGCGGCGTT ACTAGTGGAT CTAGTCCTAG CCCTTGTACA TAAATACTTA GATCTAAAGA CTAAGGTGCG GGGATGTTTA GTAGATCTAA GTATGCTTTA TTACCAGACG AGTGTAGATC TATCGAGTCA AGAAGGGCAC GGACGGTTAG ATCTACAGTT GGAGTGGTTC GCTCTTAGCC TAGATCTAAA TGTAAGAATC GGACGCGAGT ACATAGATCC GAGCTCGGTA CCAAGCTTGA TGCATAGCTT GAGTATTCTA TAGTGTCACC TTAAATAGCT TGGCTTAATC CTGGTCCTAG CTTTTTCCTG GTGTAAAAGT CGCGACGGCA TAACACCAGA CACCACCGAC GGGTCATAAC CCCACCCCGG GCACGTTTCC ACCCACCGGA CGACCCATAC CTCACAAACT ACACAGACCA CAAGAAACAC CCCCACCCAA CCCAACTATA AGCAAACCAG CAAACAGGCC GAAACAACGA // ID R25_0_0000308 standard; DNA; UNC; 754 BP. XX AC R25_0_0000308 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000308 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009c04.f1; XX FH Key Location/Qualifiers FH FT source 1..754 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000308_A FT misc_binding 119..152 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000308_1" FT /note="Base quality score is 1.7115e-03" FT misc_binding 152..185 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000308_2" FT /note="Base quality score is 4.3582e-03" FT misc_binding 185..218 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000308_3" FT /note="Base quality score is 3.4976e-04" FT misc_binding 218..251 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000308_4" FT /note="Base quality score is 4.9405e-03" FT misc_binding 251..284 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000308_5" FT /note="Base quality score is 3.4303e-02" FT misc_binding 284..318 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000308_6" FT /note="Base quality score is 8.7249e-02" FT misc_binding 318..351 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000308_7" FT /note="Base quality score is 1.3055e-02" FT misc_binding 351..384 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000308_8" FT /note="Base quality score is 1.1156e-02" XX SQ Sequence 754 BP; 284 A; 161 C; 167 G; 142 T; 0 other; AGGCGTGAAT GTATACGACT CACTATAGGG CGAATTGGGC CCTCTAGATG CATGCCGAGC GGCGCAGTTG TGATGGATAT CTGCAGAATT CCAGCACACT GGCGGCCGTT ACTAGTGGAT CTACGGGGCC TGGTGAGGGG AAATGACTTA GATCTAGCGA GCTTGGGATA CCGCGCACTA ATAGATCTAC CGCGTATTAA GGCACGACTT TATATAGATC TATTAGTGCG CGGTATCCCA AGCTCGCTAG ATCTAAATCA ATATCCCGCT ATGCTCGCTC AAGATCTAAC TTCATTTAAC GCGGGGCGGG AGTTAAGATC TAGGACTCGA GCTCATCTAG CACGTCATAG ATCTATATTG TAGATGCTCG AAGATATACT TAGATCCGAG CTCGGTACCA AGCTTGATGC ATTAGCTTGA GTATTCTATA GTGTCACCTA AATAGCTTGG CGTAATCATG GTCATAGCTG TTTCCTGGTT GAAAAGATAC AAAAAAAAAC ACAAGACACA AGGCACAAGA CCTACACAAG CGACGAGGAA CAAGGAAGAA AACAAAAAGA GAAGAAAACC ACAAAGACAT ACGCAATCAC AAACAAACAA ACAAACACAC ACAAAGCAAG AACACAGAGG ACCAAAGAGT AACAACAGAC AGAGGGAAAA AAAGAGACAA ACATAAAAGC GAACTAGACG AATAATACAC CAAAGAACGA CGAAAAAACA ACAAACCATC AAAAGCTGAA AAGAAACGAG AAAC // ID R25_0_0000309 standard; DNA; UNC; 766 BP. XX AC R25_0_0000309 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000309 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009c05.f1; XX FH Key Location/Qualifiers FH FT source 1..766 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000309_A FT misc_binding 113..146 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000309_1" FT /note="Base quality score is 1.8182e-02" FT misc_binding 146..179 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000309_2" FT /note="Base quality score is 3.1189e-03" FT misc_binding 179..212 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000309_3" FT /note="Base quality score is 1.6854e-03" FT misc_binding 212..245 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000309_4" FT /note="Base quality score is 9.2869e-03" FT misc_binding 245..278 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000309_5" FT /note="Base quality score is 1.2081e-02" FT misc_binding 278..311 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000309_6" FT /note="Base quality score is 3.6089e-03" FT misc_binding 311..344 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000309_7" FT /note="Base quality score is 2.4611e-02" FT misc_binding 344..377 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000309_8" FT /note="Base quality score is 4.5209e-02" FT misc_binding 377..410 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000309_9" FT /note="Base quality score is 6.5897e-02" FT misc_binding 410..443 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000309_10" FT /note="Base quality score is 7.6578e-02" XX SQ Sequence 766 BP; 220 A; 197 C; 192 G; 157 T; 0 other; TTGTATACGA TTCACTATAG GGCGAATTGG GCCCTCTAGA TGCATGCTCG AGCGGCGCCA GTGTGATGGA TATCTAGCAG AATTCCAGCA CACTGGCGGC CGTTACTAGT GGATCTAAGC CACTTCTAAG AGAAGAAACT CCTAGATCTA TCCACCCGGA GCAGAGACCC GGAAGTAGAT CTAATGAATG GACCGGGGTT CGATGAGGTA GATCTATTTA GGACGCGAGG ATAACTTTTC GTAGATCTAA GTCGGTTATC AGTGGCAAGC AGCGTAGATC TATCTAATGA GCGGAGCGGG TAATTCTTAG ATCTAAAGGA GTCTCTCCCG GCCCACTGAA TAGATCTAGG GAGCAGGCCG CTGGACATCA GGGTAGATCT ACCTTGGGGT AGGCTTATGT CTCTTTAAGA TCTATCCGCG AATAATGATG GGAGATGAGT AGATCTAGTA AGAGTGAGTG ACGACCTAGT ATCTAAGATC CGAGCTCGGT ACCAAGCTTG ATGCATAGCT GGAGTTTTCT ATAGTTGTCC CTAAATAGCT GGGGGTAATC ATGGTCATAG CTTTCCTGTG TAAACAACGC AGCGGGACCA CCCCCCAAGC AACGAGAACA AGACAACCGC ATATCACACC CCGAACCAAG AGACAAAACG CACACGCACA CGACAGCGAG GGCCAACGCC ACACACCACC GACCGACCAC CTAGACCACC GCTGCGAGCA ACCTGACAGC CAGACCACCC CCCGAATCAC AGCCTCCCCA TAAGAA // ID R25_0_0000310 standard; DNA; UNC; 861 BP. XX AC R25_0_0000310 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000310 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009c09.f1; XX FH Key Location/Qualifiers FH FT source 1..861 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000310_A FT misc_binding 127..160 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000310_1" FT /note="Base quality score is 2.3753e-02" FT misc_binding 160..193 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000310_2" FT /note="Base quality score is 1.4373e-02" FT misc_binding 193..226 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000310_3" FT /note="Base quality score is 5.3012e-02" FT misc_binding 226..259 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000310_4" FT /note="Base quality score is 5.4046e-02" FT misc_binding 259..292 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000310_5" FT /note="Base quality score is 3.0200e-02" FT misc_binding 292..325 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000310_6" FT /note="Base quality score is 3.8195e-02" FT misc_binding 325..360 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000310_7" FT /note="Base quality score is 9.1857e-02" FT misc_binding 360..393 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000310_8" FT /note="Base quality score is 3.6604e-02" FT misc_binding 393..428 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000310_9" FT /note="Base quality score is 1.1019e-01" FT misc_binding 428..461 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000310_10" FT /note="Base quality score is 8.9181e-02" FT misc_binding 461..495 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000310_11" FT /note="Base quality score is 5.9225e-02" FT misc_binding 495..528 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000310_12" FT /note="Base quality score is 1.0767e-01" XX SQ Sequence 861 BP; 240 A; 227 C; 201 G; 192 T; 1 other; CTAATCGCAG TGATTGTATA CGACTCACTA TAGGGCGAAT TGGGCCCTCT AGATGCATGT CGAGCGGCCG CCAGTGTGAT GGATATCTAG CAGAATTCCA GCACACTGGC GGCCGTATAC TAGTGGATCT TCTAAGAGAG GGGCGGGATG TGTATTTAGA TCTAATTTCG GAGGGAAAAT CTCAAGCGCT AGATCTAGTC GCGAGGCCTG GCCGGGATCA TATAGATCTA GGTCCCCCCC ATGTCGGAGA AGCGTTAGAT CTAAGGGATA CCAGATGAAG ACGCGGGGTA GATCTACAGG ACGGTAGGGC GTGATGTAGC CTAGATCTAA GGTGACCCGA GAATGGTGCT TTAGGCTAGA TCTAGCACCT AGGTAAACCG GTCGCACGTT AGATCTAAGC TTGTCGAGCA ATCCCCGCTC GATTAAGATC TAAGTAAATG CTGGCGGTCC CCCCTCCTAG ATCTATTTAC AAGTAGGCTT CGCGTAGTCT TTAGATCTAC GAGGATTGAG CGTCACATTC TGCGCTAAAT CTTACGGATC GAGCGGGTGA TCACCTATAT TAGATCCGAG CTCGGTACCA AGCTTGATGC ATACGCTGGA GTCTCTATAG AGTCACCTAA ACTTGCTTGG CGCTATCCAT GGTCCATGCC TGTGTCTGTG ANACAAGCCT CAGTGAGCTT CTCAACCGCA TCACCACCAC AACAACATAA CACACAACCA AACACACGAC CACACACAAG AATAATCTCT TCTATCATCA CTACCCAGCA GCAGTTCCCG CTCAACACAA CACGACATCT CACGTCACAT CAGAGGCGCC GAACCACACC CACACCGAAA AGATAAAACA CAACACACCA T // ID R25_0_0000311 standard; DNA; UNC; 921 BP. XX AC R25_0_0000311 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000311 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009c12.f1; XX FH Key Location/Qualifiers FH FT source 1..921 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000311_A FT misc_binding 135..168 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000311_1" FT /note="Base quality score is 2.0934e-02" FT misc_binding 168..201 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000311_2" FT /note="Base quality score is 2.3575e-03" FT misc_binding 201..234 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000311_3" FT /note="Base quality score is 8.0775e-04" FT misc_binding 234..267 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000311_4" FT /note="Base quality score is 2.3553e-02" FT misc_binding 267..300 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000311_5" FT /note="Base quality score is 3.8173e-02" XX SQ Sequence 921 BP; 269 A; 222 C; 239 G; 191 T; 0 other; ACCCCCACGG AAAAAAAACG CAGGAATGAT ACGATCACTA TAGGGCGAAT TGGGCCCTCT ACGATGCATG CTCGAGCTGG CGCAGTGTGA TGGATATCTG CAGAATTCCA GCACACTGGC GGCGTTACTA GTGGATCTAC TCCACATGAC GACATTAGTA ACTATAGATC TAGTATTGGC AGTTGCTAGG CATGGGATAG ATCTAGGCTT TATGCGTTTT GAATTCGATG TAGATCTATC CCTTAGACGA CTTGTTGCCA CCTTAGATCT ATTAAATTCC GGCAGTCGCT TATCGCTAGA TCCGAGCTCG GTACCAAGCT TGATGCATAG CTTGAGTATT CTATAGTGTC ACCTAAATAG CTTGGGTAAT CCTGGTCCTA GCTGTTTCCT GGTGAGAAGT CCCAGACGGA TCCAACGCGC CACACGACCA ACGGAGCAAA TACCAGAGCT GCATAACCGT ACGCAGTGCG CGAATAACTG CCGAGGCACA GCGACTTGAG ACAGTAAATA GCATAGCAGC ACTAAAGAGA TAACCAGCAG CAACCAATAG CGCGCACGCG CCGACAAGAC AAGGCACGCG ACCAGAGCCG GCGGTGCCCA CAGGCACGAA TCATCTCTCC ACACCATACA GATAGGAAAC GAATCATGGG AAAAAAGACA GATCATTGAA GCGGAATATA TCCTGGAGCA GCTCAAGTCA CGGAGATGCC ATCTGCGTCA GGCGTAGTGC TGGGGTGACG GCGTAGTCAC GATACTTAGT ACGGTTCATT CGTAGCAGTC ATTCAATGCA TCGTCAAGAA CACAATAAGT AGCAATCACT GCGAGATCTC CTTGTAAGAA GAGCAAAGTG AGAGAGGGGG GTGCTCATGT GAGAGCAGGA CGTACCGCCA AGTCAGCTGA TGCGTAGCGG AACGAGCCGA A // ID R25_0_0000312 standard; DNA; UNC; 707 BP. XX AC R25_0_0000312 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000312 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009d05.f1; XX FH Key Location/Qualifiers FH FT source 1..707 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000312_A FT misc_binding 118..151 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000312_1" FT /note="Base quality score is 1.8552e-04" FT misc_binding 151..184 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000312_2" FT /note="Base quality score is 1.4959e-04" FT misc_binding 184..217 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000312_3" FT /note="Base quality score is 1.1001e-03" FT misc_binding 217..250 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000312_4" FT /note="Base quality score is 3.7643e-03" FT misc_binding 250..283 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000312_5" FT /note="Base quality score is 1.0318e-03" FT misc_binding 283..316 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000312_6" FT /note="Base quality score is 2.5622e-03" FT misc_binding 316..349 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000312_7" FT /note="Base quality score is 1.7628e-04" FT misc_binding 349..382 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000312_8" FT /note="Base quality score is 4.2636e-04" FT misc_binding 382..415 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000312_9" FT /note="Base quality score is 3.0854e-03" FT misc_binding 415..448 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000312_10" FT /note="Base quality score is 1.1379e-03" FT misc_binding 448..481 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000312_11" FT /note="Base quality score is 1.3779e-02" FT misc_binding 481..514 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000312_12" FT /note="Base quality score is 2.6360e-02" XX SQ Sequence 707 BP; 229 A; 147 C; 167 G; 164 T; 0 other; CAGTGAATTG TATACGACTC ACTATAGGGC GAATTGGGCC CCTAGATGCA TGCTCGAGCG GCGCCAGTGT GATGGATATC TGCAGAATTC CAGCACACTG GCGGCCGTTA CTAGTGGATC TATGAATCGA AGAAGGGGGC ATATATTTAG ATCTAAGTGA TCGGGGCGGG ATCGTCTTCA TAGATCTAAA AATTTCCTCT GCTTTCGTCG CCGTAGATCT AATAAACGCA AAAATTCGAA CCACTGTAGA TCTAGGCCAA ATTCCGCGTT GACAAGATGT AGATCTAGTG GGTCTTCTGA GGAGTGATGT TGTAGATCTA GGCGCGAGCG GGAAATGGTG TGAAGTAGAT CTAACAGGCT AGTGGTCTGT CCTCCGAATA GATCTAAAGG GTGGTGGGAT ATCGAGGGGC GTAGATCTAT ACGACGCATC CTTACCCACC AGCCTAGATC TAGGATAGAG ACGTCTAGCT GAATTCTTAG ATCTATACAA CATATGATAG GGTCAGCGCT TAGATCCGAG CTCGGTACCA AGCTTGATGC ATAGCTTGAG TATTCTATAG TGTCACCTAA ATAGCTTGGG GTAATCCCTG TCCTAGCTGT TCGTTGAAAC AAAACAGATA ACAACAAAAA AAAAACCAAC AAAAAAACAA ACAAACAATA AACAACAACG AAACACAAAC AAAAAAAGAC CACGAAGACA CAACCAC // ID R25_0_0000313 standard; DNA; UNC; 873 BP. XX AC R25_0_0000313 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000313 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009d08.f1; XX FH Key Location/Qualifiers FH FT source 1..873 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000313_A FT misc_binding 130..163 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000313_1" FT /note="Base quality score is 1.5087e-03" FT misc_binding 163..196 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000313_2" FT /note="Base quality score is 3.8422e-03" FT misc_binding 196..229 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000313_3" FT /note="Base quality score is 5.9905e-03" FT misc_binding 229..262 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000313_4" FT /note="Base quality score is 3.5473e-03" XX SQ Sequence 873 BP; 347 A; 180 C; 234 G; 112 T; 0 other; CCCGGGCTCA CACCGCAGTG AATGTATCGA CTCACTATAG GGCGAATTGG GCCCTCTAGA TGCATGTCGA GCGGCGCAGT GTGATGGATA TCTGCAGAAT TCCAGCACAC TGGCGGCCGT TACTAGTGGA TCTAACTATT AACGTTATTT ATATACGCCT AGATCTACGG CGCTGCACCA TGATACAAGT TGTAGATCTA CAAGTATATG CCCGGACCGG TGATCTAGAT CTAGTCCCCA ACTCTATACG CCCCGTAATA GATCCGAGCT CGGTACCAAG CTTGATGCAT AGCTTGAGTA TTCTATAGTG TCACCTAAAT AGCTTGGCGT AATCATGGTC ATAGCTGTTT CCTGTGTGAA AAGGCCAAAG AGAACACACA ACACAAAACA AAAACAGAAG AAAAACAAAC AAAAAAAAAA CAACAAGAAT GATAAGACAC AGGACAGCGA AAGAACAGCA CTACGAGCCT CACGGGGAGA CAGACGACAA GACAGACAGG AGACGGAGGA AGGAGAAAGA AGCAGAGGAG GCGAGACCCA GTGCGGGAGC AGAACCGACA GACACCGAGA CAGAGAGAAA CAGAAAAAGG CAAACACAGA AAGAAGCAGG AAGAGACGAG AATAGTAGGA AGGGCAGGAC AGGACGACTG ACAAAGACAG AAAGAGAGCA GAGCGGAAGA AAAAAGGAAG AGAGGAACAG AGAGCAAGAT GGGACGAAGG AGAAGTAAAA GTAAAAGGAG AGACAAGAAC TGAAAGCAGA CCAACGAGAG AGAGAGAAAG CGAGAGACAC AGAACTGACG ACGTCAACAA CCACAAGAAG GCACAGCAAG AGGAGGAAAA CGAACCACAA GAACAAGATA AGCAAACCAC CGG // ID R25_0_0000314 standard; DNA; UNC; 827 BP. XX AC R25_0_0000314 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000314 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009d09.f1; XX FH Key Location/Qualifiers FH FT source 1..827 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000314_A FT misc_binding 142..175 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000314_1" FT /note="Base quality score is 2.1072e-03" FT misc_binding 175..208 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000314_2" FT /note="Base quality score is 1.0384e-03" FT misc_binding 208..241 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000314_3" FT /note="Base quality score is 1.6803e-03" FT misc_binding 241..274 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000314_4" FT /note="Base quality score is 2.0176e-02" FT misc_binding 274..307 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000314_5" FT /note="Base quality score is 4.1811e-02" XX SQ Sequence 827 BP; 285 A; 192 C; 190 G; 160 T; 0 other; CACACCCGAC ACACGGCTGT AACGCAGTGA ATTGTATACG ACTCACTATA GGGCGAATTG GGCCCTCTAG ATGCATGCCG AGCGGCGCCA GTGTGATGGA TATCTGCAGA ATTCCAGCAC ACTGGCGGCC GTTACTAGTG GATCTAATGA CTTAACGAAT AACAGAAAAT ATAGATCTAG GGCAGCGTGC TGTTAGTCCT AGCTTAGATC TATAGCATGG TTCCTTTTGT CGCACACTAG ATCTAGGGTA GGATTCTGTA GATAGCGAAT TAGATCTATG CGAATCCAGT AGCAGGGCTC TATTAGATCC GAGCTCGGTA CCAAGCTTGA TGCATAGCTT GAGTATTCTA TAGTGTCACC TAAATAGCTT GGCGTAATCA TGGTCATAGC TGTTTTCCTG TGTGAAAATA CTCATGGTCA TAAGCTCTAA CATGTGTGAC ACAGCTCTAC ACATATACAA CACACGCAAA GCCACAAATA GCATCATCCA ACACAACACC ACGAACACCA CCACACAACA TCACACACCA ACGTCAGACA CACTCTACAC TACAAACAAC GCAACAACCA CCCAACTAAG AGCAGAATAG AGAGTAGGAG AATACAGCGA GCGAGCAGCA ACAAAAGAAT GCTAAAAGAC GCACTAGGAG AAAGTAAGAC GGTAAGAAGC GTAGAAGGCG CGTATCGAAA CATAAGTAGA GAAAATAGGA CAAGAGTAAG GGAGCCACAC TGTCGCAGCT AACAGAGAAT TAACGAGAGA CGAAGAGGGA AGCTAGTAAC GGAAGACCGA CCATGGCGGA CAGGCCACAA CAGCACTGGA GTAAACT // ID R25_0_0000315 standard; DNA; UNC; 822 BP. XX AC R25_0_0000315 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000315 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009d10.f1; XX FH Key Location/Qualifiers FH FT source 1..822 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000315_A FT misc_binding 134..167 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000315_1" FT /note="Base quality score is 5.8461e-02" FT misc_binding 167..200 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000315_2" FT /note="Base quality score is 1.0690e-04" FT misc_binding 200..233 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000315_3" FT /note="Base quality score is 2.8617e-04" FT misc_binding 233..266 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000315_4" FT /note="Base quality score is 1.1952e-04" FT misc_binding 266..299 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000315_5" FT /note="Base quality score is 1.0600e-03" FT misc_binding 299..332 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000315_6" FT /note="Base quality score is 4.4263e-03" FT misc_binding 332..364 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000315_7" FT /note="Base quality score is 3.2096e-02" FT misc_binding 364..397 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000315_8" FT /note="Base quality score is 5.2012e-02" FT misc_binding 397..430 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000315_9" FT /note="Base quality score is 1.2655e-02" XX SQ Sequence 822 BP; 254 A; 259 C; 148 G; 159 T; 2 other; CCCCCCGGCG TCACCGCACT GAATGTATAC GACTCACTAT AGGGCGAATT GGGCCCTCTA GATGCATCTC GAGCGGCCGC CAGTGTGATG GATATCTGCA GAATTCCAGC ACACTGGCGG CCGTTACTAG TGGATCTACT GGTGCGATGC GATTTGGATG GTCTAGATCT ATCCGAAAAC CACATTAGCC CGCTAATAGA TCTACGCCCC TATCCACAAG AGCTAACTCT AGATCTAAGC CGGTGTCCTC GCTATAACCT CATAGATCTA GTATCAAACA GTTCGCCAGC GATTTTAGAT CTAAGATCCT CGCATGAAAT CACCCGCATA GATCTAAGAC GGTTCGGGAT TGGTAATCCC TAGATCTAGG TACCGTACCA TTGATCAATT GGATAGATCT AATCGAAATA TCAGGTTCTC ACCCAGTAGA TCCGAGCTCG GTACCAAGCT TGATGCATAG CTTGAGTATT CTATAGTGTC ACCTAAATAG CTTGGNGTAA TCATGGTCAT AGCTTGTTTC TGTTGAAAAC GGNCTCACCA AACAACCACC ACACCCCTCG CACCACCCCC CACACCCACC CTCCCCCAGC CACCCACTGC ACACAACAAA GACTATCGCA GAGAACCATA CATCCACACC AAACACCTAA ACCAAACATA AACCACACCC CGCCGACAAA ACTAGTTCCA CACTCGAGAA CAACGAGACA TCACACGCAC ACAAAGCATC ACCAGCAACC ACACTCCGAC AGAGACCAGC GGCACACAAC AATACAAGAG CACACAAAAA CACAGCACGA CGCAATCAGC ACGCCCCAAC CA // ID R25_0_0000316 standard; DNA; UNC; 799 BP. XX AC R25_0_0000316 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000316 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009d11.f1; XX FH Key Location/Qualifiers FH FT source 1..799 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000316_A FT misc_binding 136..169 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000316_1" FT /note="Base quality score is 3.2499e-03" FT misc_binding 169..202 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000316_2" FT /note="Base quality score is 4.2673e-03" FT misc_binding 202..235 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000316_3" FT /note="Base quality score is 5.5000e-03" FT misc_binding 235..268 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000316_4" FT /note="Base quality score is 1.2682e-02" FT misc_binding 268..301 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000316_5" FT /note="Base quality score is 2.2177e-02" FT misc_binding 301..334 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000316_6" FT /note="Base quality score is 7.9003e-03" FT misc_binding 334..367 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000316_7" FT /note="Base quality score is 3.1335e-02" XX SQ Sequence 799 BP; 318 A; 197 C; 125 G; 158 T; 1 other; CAACACGGCC AAAAACGCAG TGATTGTANA CGAGTCACTA TAGGGCGAAT TGGGCCCTCT AGACTGCATG CTCGAGCGGC GCCAGTGTGA TGGATATCTG CAGAATTCCA GCACACTGGC GGCCGTTACT AGTGGATCTA TCCTTTTATA TTATCGCATG ACACCTAGAT CTAAGCGGCT GTGCGCGAAC ATCGTCGATA GATCTACGGA TGGAACGTAG CATGCGTGAG TTAGATCTAG ATGACGCGTG GTCGGGGCTT TAAATAGATC TAGTGAACGG TTAGAACGAT AAATGGTTAG ATCTAGGAGC CCCACCGTAG CCCAAACAAT TAGATCTAAT CATCACTATT GAGACAGCTC CCCTAGATCC GAGCTCGGTA CCAAGCTTGA TGCATAGCTT GAGTATTCTA TAGTGTCACC TAAATAGCTT GGCGTAATCA TGGTCATAGC TTGTTCCTGG TGTTGAAACA CACCACCACA TAACACAAAG CACACACACA AAGACAGAAC AAAACAACAC ACAACCACAC CAAACAACAA GAATACCACA ACACAATAAC ACACACACAA TCACACAAAA CAAACAACAA AAACAATACA CCACCACCGC CCAAATACCA CCATTTAGAA TCATAAACAA TAATAAAATA ACATATAACA AACAACAAAT ACCAAAAACA AACCAAAATC ACCAGACATT ATCACCAATT TTAAATAAAT ATATAAACAA AACAAAACAA CAAAAAAAAC TCCAACAATT TCAAAAAATC AAAACACTAC TAACATCACA GAAAATCAA // ID R25_0_0000317 standard; DNA; UNC; 429 BP. XX AC R25_0_0000317 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000317 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009e01.f1; XX FH Key Location/Qualifiers FH FT source 1..429 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000317_A FT misc_binding 130..163 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000317_1" FT /note="Base quality score is 2.8485e-03" FT misc_binding 163..196 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000317_2" FT /note="Base quality score is 3.3614e-03" FT misc_binding 196..229 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000317_3" FT /note="Base quality score is 5.8809e-03" FT misc_binding 229..262 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000317_4" FT /note="Base quality score is 1.0861e-03" XX SQ Sequence 429 BP; 142 A; 81 C; 102 G; 102 T; 2 other; AACGGTGTAA AGGCAGTGAT TGTATACGAT TCACTATAGG GCGAATTGGG CCCTCTAGAT GCATGTCGAG CGTGCGCAGT GTGATGGATA TCTAGCAGAA TTCCAGCACA CTGGCGGCGT TACTAGTGGA TCTACACTAG AACCAACCCC TCCGATCGCT AGATCTAATG GTTAATGCCG GGTCGACTAT TTTAGATCTA TACGGGGTTA GGTTGGGCCG AGGGTTAGAT CTACTCAAAG TAATGCCTAT CGCGGCTTTA GATCCGAGCT CGGTACCAAG CTTGATGCAT AGCTTGAGTA TTCTATAGTG TCACCTAAAT AGCTTGGTGT AATCATGGTC ATAGCTGTTT CCTGTGTGAA AAGNAAAAAA CAAGCACAAG AAAACAAACA AGACAAAAAA AAGAAAAAAA AAAGACAGAA AAAAAAAAN // ID R25_0_0000318 standard; DNA; UNC; 887 BP. XX AC R25_0_0000318 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000318 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009e05.f1; XX FH Key Location/Qualifiers FH FT source 1..887 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000318_A XX SQ Sequence 887 BP; 454 A; 196 C; 71 G; 166 T; 0 other; TAATACACGA AGAGCTGGTG TATAATCGCA GTGATTGTAT ACGTTTCACT ATAGGGCGAA TTGGGACCCT CTAGATCATG TCGAGCGGCA GCCAGTGTGA TGGATATCTT GCAGAATTCC AGCACACTGG CGGCCGTTAC TAGTCGAGCT CGGTACCAAG CTTGATGCAT AGCTTGAGTA TTCTATAGTG TCACCTAAAT AGCTTGGCGT AATCATGGTC ATAGCTTCTT CCGTGTGTAA ACGCACGATA TAAAAATCAA CAAAATTAAT TATGAAATAA CAACACCACC AACTTTAATA TAATCTACAT TAAAACCCTT ACCTACATCA AAACAAATAC TACACTATTA TTCATCAACA TAAACTAAAA ACTTAAACAA TAAAACATCA GAAAATAACA TCACACAAAA CTTCCATACC AATAACACAC TACACAATAT AACACACAGA ATATAAATAC TAAACTACAC TATCATAATT AATACAGTCA CATACACACA CACAAAAACA CGAACCACAA CAAAACTCAA AAAATCTAAA ACAAAAACAA ATCACAAAAA AAAAACATAA AACAAACACC CACAAACAAC TATAAAGAAA AAACATAAAC TAATAAAAAT AATAATAAAT ACTCATTATA AATCAACTAA AAAACAACAC ACAAAACAAA AATACACAAA CACCACCACA AAACACCCAC AAAAAAAAAA CATCCAAAAT CTACTACACA GAAACAACAT AACACATACA AAACACAAAC CTAACAAAAA ACAAGAAAAT AAATAAACAC CAAAAAAAAA ACAAATAAAC AACAAAAAAT AACTACACAT AAAAAAATCA TAATAAAAAA ACATAAAAAA ACACAAAAAC CACATAAACA CAACAAA // ID R25_0_0000319 standard; DNA; UNC; 789 BP. XX AC R25_0_0000319 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000319 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009e06.f1; XX FH Key Location/Qualifiers FH FT source 1..789 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000319_A XX SQ Sequence 789 BP; 418 A; 167 C; 114 G; 90 T; 0 other; CGGGTTTTAA CGACATGATT GTATACGATT CACTATAGGG CGAATTGGGC CCTCTAGATG CATTCGAGCG GCGCCAGTGT GATGGATATC TGCAGAATTC CAGCACACTG GCGGCCGTTA CTAGTGGATC GAGCTCGGTA CCAAGCTTGA TGCATAGCTT GAGTATTCTA TAGTGTCACC TAAATAGCTT GGCGTAATCA TGGTCATAGC TGTTTCCTGT GTGAAAAGGC CGCCAGATAT AATAGAGATA ACGATGCAAG TATAAACAAA AACAAGAACA GCAAATAACC CAAAATAAAA AAAAAAAACA AAAAAAACCA ACACAAAAAA CAAAAAAAAA CCACACCAAA CTACACTAAT AAGACAAACA AACAACAACA ATAAAAAAAC AAAAAACACA AAAAACAAAA AAAACAAAAA AAAAAAAAAC AAAAAAACAA ACAAACCCTC ATAAAACAAA AAAGAAAACA GCACATAAAA CACCATATCA AACAAAACAA AACAAAAACT CACAAAATAC ACAATACCAA AAAAAACAAC AAAACAAAAA AAACCACCAA AACACAAACA ACAAACAACA TCAAAAAAAG ACAGAAGAAA GAACAAGAAA GAAACCGGGC AGCGAAAAAA AAGCAAGGCG GCACGCGTAC GTAGACCCAC ACAAAAAAAA AGCACAGGAA ACGGACAACG CAGAAAGAGA CAAACGAACA AAACCAAAAA ACAAGAGCCA CAACTCGACG ACAGAAACAA GAACAACAAA GAAAACACAC AAAACCAAAA AGAGAAAAG // ID R25_0_0000320 standard; DNA; UNC; 817 BP. XX AC R25_0_0000320 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000320 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009e07.f1; XX FH Key Location/Qualifiers FH FT source 1..817 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000320_A FT misc_binding 120..153 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000320_1" FT /note="Base quality score is 3.3353e-04" FT misc_binding 153..186 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000320_2" FT /note="Base quality score is 2.5430e-04" FT misc_binding 186..219 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000320_3" FT /note="Base quality score is 7.8681e-05" FT misc_binding 219..252 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000320_4" FT /note="Base quality score is 1.8098e-04" FT misc_binding 252..284 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000320_5" FT /note="Base quality score is 3.7858e-04" FT misc_binding 284..317 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000320_6" FT /note="Base quality score is 6.1218e-04" FT misc_binding 317..350 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000320_7" FT /note="Base quality score is 1.1248e-02" FT misc_binding 350..383 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000320_8" FT /note="Base quality score is 4.8191e-04" FT misc_binding 383..416 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000320_9" FT /note="Base quality score is 1.0318e-03" XX SQ Sequence 817 BP; 339 A; 185 C; 149 G; 143 T; 1 other; AGACGAGAAT GTATANTACT CACTATAGGG CGAATTGGGC CCTCTAGATG CATGCTCGAG CGGCGCCAGT GTGATGGATA TCTGCAGAAT TCCAGCACAC TGGCGGCCGT TACTAGTGGA TCTATTAATA TAGGTGCCTA GCAAATGCCT AGATCTAATT TCTGAAAACT ACCTGTCGCT GATAGATCTA TATTGGCACA CCAACCCCTC TTCCCTAGAT CTACTCGAAC AATATCGCGC AAACTTTCTA GATCTAGCCA AAAGTTGCTT CTGTGATCAC GAGATCTATG TGCGAAGATT TGCCAGCGTT GTGTAGATCT AGTGAGTCAT ACGATGCAGG GGGGGATAGA TCTACGGGGA ACGAGAAAGA ACGAGAAATT AGATCTAACC TCCTAATCAT ACCTCCTCCT AATAGATCCG AGCTCGGTAC CAAGCTTGAT GCATAGCTTG AGTATTCTAT AGTGTCACCT AAATAGCTTG GCGTAATCAT GGTCATAGCT TGTTTCCTGG TTGAAAAAGG GACAAGAAGA CAAAAAAAGA CACAGACAAA AACAAAAACA CTAAACAAAA CACCGAAACA CAACAAGAAC GAAAGAAGAC ACAAACACAA CAAAAAGAAA ACACCAAGAA CAAAAAAAAG AAAACGGCAC GATACACACA CAGAGCAAAG ACACACAAAA AGGACCACAA AAAAACAACA AAAAGAGCAA AACACACACC AACAAAAGCA CAACAAAAAG AAAACAAACA ACAAAAAAAA AAACGAGAGA ACAGTACCAA CACAACAACC AAAACGAACA CAACAAAACA ACCCAAA // ID R25_0_0000321 standard; DNA; UNC; 848 BP. XX AC R25_0_0000321 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000321 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009e08.f1; XX FH Key Location/Qualifiers FH FT source 1..848 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000321_A FT misc_binding 132..165 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000321_1" FT /note="Base quality score is 2.9660e-03" FT misc_binding 165..198 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000321_2" FT /note="Base quality score is 3.4381e-03" FT misc_binding 198..231 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000321_3" FT /note="Base quality score is 4.3111e-02" FT misc_binding 231..264 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000321_4" FT /note="Base quality score is 3.1360e-02" FT misc_binding 264..297 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000321_5" FT /note="Base quality score is 3.2299e-03" FT misc_binding 297..330 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000321_6" FT /note="Base quality score is 1.0985e-02" FT misc_binding 330..363 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000321_7" FT /note="Base quality score is 1.1854e-02" XX SQ Sequence 848 BP; 314 A; 185 C; 202 G; 147 T; 0 other; ACAGACGAAC ACGCAGGAAT GTAATACGTC TCAACTATAG GGCGAATTGG GACCTCTAGA TAGCATGTCG AGCGGCGCCA GTGTGATGGA TATCTAGCAG AATACCAGCA CACTGGCGGC GTTACTAGTG GATCTATTTA TATCATAAGA GCCTAGTCCA GTAGATCTAA TAGATGATGG AGAGGATGTC CCTCTAGATC TAGGAGGGCG GGATTTGTTA GTACAGTTAG ATCTACTCGG TGTTAGGGGG GATTGGTGCA TAGATCTAAA CATAAGCAGC CAAAAACACA TGTTAGATCT AGGAGGTCAT AAAGTTTGGC TACTTATAGA TCTACATATA TCCAACATCC CATTGACACT AGATCCGAGC TCGGTACCAA GCTTGATGCA TAGCTTGAGT ATACTATAGT GTCACCTAAA TTGCTTGGCG TAATCCATGG TCATAGCTGT TTCCTGTGTT GACACAGCCA CAAAACACTA CCACAACTAA TCACCAACAC AAACCAACCA CATACAAAAC AAAACACAAA ACACACACAA TAATCTAAAC AAACAACATA TACACAACAC ACCACACAAC AATCACCACA CACACACACA CGAGACAGAC GGGTCAGGCA TAGAGTCACA AAGACAGCGG AGGGAGAGCT ATAGAAGAAA TAGAAGGACG CGGCAGCACA GATACAAGGG AAAAGAGAAA AGGCGAAAGG AAGACGTAGA CATCCAAAAA ACATGAAGAG CGAGAGGCAA GGCGGACGGA AGGGCCGGCG AAGGAGAAGA CAGGCAGAGG AGGTACCACA AGCAGGACTA GCAGGGACGG AAGCCAGAAA CCAGAACGAC AAGACAGA // ID R25_0_0000322 standard; DNA; UNC; 1032 BP. XX AC R25_0_0000322 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000322 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009e10.f1; XX FH Key Location/Qualifiers FH FT source 1..1032 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000322_A XX SQ Sequence 1032 BP; 401 A; 345 C; 106 G; 180 T; 0 other; ACAAAACCAG AGGAAAAAAA AATACGTATG TATACGACTC TACTATAGGG CGAATTGGGC CCTCTAGATG CATGCTCGAG CGGCGCCAGT GTGATGGATA TTAGCAGAAT TCCAGCACAC TGGCGGCGTT ACTAGTGGAT CCGAGCTCGG TACAAGCTTG ATGCATAGCT TGAGTATTCT ATAGTGTCAC CTAAATAGCT TGGCGTAATC ATGGTCATAG CTGTTTCCTG TGTGAAAAGG CCGGTGAGTA TGTCCTCCCA CATAAGATTT AGCACGTACC ACTCACACAG ACCCTGAGCA CTACGAGCGA TCACCTAATC GCAGCCCACG CACACAACTA CACTCTATCC ACATCTCCCC TATCACATCC CTATGCTAAC TAACAACAGC CTCATCCTAC CCACCACCCC CGCCGCCACA GACATACACC TCCCAATCTA CTACATCCCA TCCACACCAC CCACGCCACA CTTCCTACCA CTACCATCTC ACACCTATTC CACATCCTCT CACTAAACAA CAACTAACAT ATACAACCAT CATCTAACCA TTACACACAA TTACATAAAA CATCATAACA ACCAACATCA CACATGATCA TACAACCCAT AAACAATACA TAAACATAAC ACCAGACACC TATCAAATAC ACCACCTACA CACATCCACC ACAAAGAATC AACCCACAAA AGATCAAAAG CAACAATACC AACATATCAA GACACAGAAA CTCAACACCA ACACCTCACC CTAAATCACT ACCAACTCAC AACTACTCAC TACCAATGTA GACACAAACA CACCAACAAT CCAAATATAT ACCTAATACA ACTAAACTAA TCCAACAACG CAAAACCAGC ACAACTTAAC ACTCAGAACA TACAACATAC ACTACACGAA ACTCACAAGA ACCCTACACC ACCCACACAA AAGCAAACAC CCGAACCACC TCCAAACGCA GCCAAAACAC AACAAAGACA CAATCCACAG ACAAAATCAC ACAACAACAC AAAACCTCAC TAAATAGATC CT // ID R25_0_0000323 standard; DNA; UNC; 752 BP. XX AC R25_0_0000323 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000323 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009e11.f1; XX FH Key Location/Qualifiers FH FT source 1..752 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000323_A FT misc_binding 113..146 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000323_1" FT /note="Base quality score is 4.1311e-02" FT misc_binding 146..179 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000323_2" FT /note="Base quality score is 6.7222e-02" FT misc_binding 179..212 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000323_3" FT /note="Base quality score is 9.7237e-02" FT misc_binding 212..245 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000323_4" FT /note="Base quality score is 1.7201e-01" FT misc_binding 245..278 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000323_5" FT /note="Base quality score is 1.9616e-01" FT misc_binding 278..311 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000323_6" FT /note="Base quality score is 1.9828e-01" FT misc_binding 311..344 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000323_7" FT /note="Base quality score is 1.4567e-01" FT misc_binding 344..376 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000323_8" FT /note="Base quality score is 1.5189e-01" XX SQ Sequence 752 BP; 254 A; 170 C; 183 G; 145 T; 0 other; TGTACTACGT TCACTATAGG GCGAATGGGC CCTCTAGCAT CATGTCGAGC GGCAGCCAAG TGTAGATGGC TCTCTCGCAG AATTCCAGCA CACTGGCGGC CGTTACTAGT GGATCTAGTT ATACAGGGGG GAGCATCTCT CATAGATCTA CAAAATCCCC TGAGCCAAGA CACTATAGAT CTAATAGAAC TGGCAATGTG AGAACCGCTA GATCTATCTC ACGTGTCGAC CCCCAGGGAC CTAGATCTAT CTTTCGTCAA AGGGACGGGG ATACTAGATA TAGGTAGCCA ACTGATATAT AAAAATTAAG ATATAAGTAT TGCTAGATAG GGGCCGAGCT TAGATCTCAC TGGAGGTGAT CCTCCACCAT CAATAGCATC ACCAAAATAC ACATACCATA GCCACATAAA TCCGAGCACG ATACCAAGCT TGCAGATAGC ATGACATATA TAGTGTCACC TCACACAGTT GGGGTAATAA TGGTCATAGC TTGCACATGA GTGAAACTCA TGAAGGGTCC CACACACAAA CCAAAAAATA TCAACACTCA TAAATAGAAT CAGCGTACAG TCGAAGAGAG GAAAGAGGAG AGAAAGTCGA GGGAGAGATG CGGGTCAGAG GTGATTGGGC GGCGACAAGA GCACGTCAAC TGACGGTGAA CAAAAGAAGA CTAAAATCAG GGACAGAGCC GCCCCCACAG AGGCCCAGCA TGGCACAAGA CACGTGAAAC GCAAAATGTA ACAGAGAATG GG // ID R25_0_0000324 standard; DNA; UNC; 412 BP. XX AC R25_0_0000324 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000324 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009f01.f1; XX FH Key Location/Qualifiers FH FT source 1..412 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000324_A FT misc_binding 130..163 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000324_1" FT /note="Base quality score is 2.1863e-04" FT misc_binding 163..196 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000324_2" FT /note="Base quality score is 1.7798e-04" FT misc_binding 196..229 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000324_3" FT /note="Base quality score is 1.1018e-04" FT misc_binding 229..262 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000324_4" FT /note="Base quality score is 8.1456e-05" FT misc_binding 262..295 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000324_5" FT /note="Base quality score is 9.8574e-04" XX SQ Sequence 412 BP; 114 A; 80 C; 104 G; 114 T; 0 other; AGAGGGTGTA TACGCAGGAA TGTATACGAT TCACTATAGG GCGAATTGGG CCCTCTAGAT GCATGTCGAG CGGCGCCAGT GTGATGGATA TCTGCAGAAT TCCAGCACAC TGGCGGCCGT TACTAGTGGA TCTACAAGAA CAACCTTATC TCACAGACCT AGATCTATGG CGCATAGGGG AAAACAACAG TTTAGATCTA CTAAAATGTT TATGTACGTG TACTCTAGAT CTATAAAGTT TTGAGGGTGG CATGATCGTA GATCTAAGGG TTGGTAATTA TCGCATGTGG ATAGATCCGA GCTCGGTACC AAGCTTGATG CATAGCTTGA GTATTCTATA GTGTCACCTA AATAGCTTGG CGTAATCATG GTCATAGCTG TTTCCTGTGT GAAAAGCCCA CCAGGTTACC AT // ID R25_0_0000325 standard; DNA; UNC; 724 BP. XX AC R25_0_0000325 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000325 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009f02.f1; XX FH Key Location/Qualifiers FH FT source 1..724 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000325_A FT misc_binding 111..146 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000325_1" FT /note="Base quality score is 6.5629e-02" FT misc_binding 146..179 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000325_2" FT /note="Base quality score is 2.7018e-03" FT misc_binding 179..212 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000325_3" FT /note="Base quality score is 2.9499e-04" FT misc_binding 212..245 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000325_4" FT /note="Base quality score is 1.1182e-03" FT misc_binding 245..278 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000325_5" FT /note="Base quality score is 2.6428e-02" FT misc_binding 278..311 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000325_6" FT /note="Base quality score is 1.6577e-03" FT misc_binding 311..344 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000325_7" FT /note="Base quality score is 8.4417e-03" FT misc_binding 344..377 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000325_8" FT /note="Base quality score is 6.1867e-03" FT misc_binding 377..410 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000325_9" FT /note="Base quality score is 1.9159e-02" FT misc_binding 410..443 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000325_10" FT /note="Base quality score is 1.9223e-02" XX SQ Sequence 724 BP; 186 A; 187 C; 192 G; 159 T; 0 other; TGATGTATAC GATTCACTAT AGGGCGAATG GGCCTCTAGA TGCATGCTCG AGCGGCGCCA GTGTGATGGA TATCTGCAGA ATTCCAGCAC ACTGGCGGCG TTACTAGTGG ATCTAGTAAC TACAGACCCG CCCTTGGACA AATAGATCTA TTTTTCTTCG GTGAGGGTGT GGCGTTAGAT CTATAGATTG CGGGGGAGTG ATGTGCCCTA GATCTAACCA GATTCCGTTT CTAGCCCAAC GTAGATCTAG GTGCATTTCG TGGACGCTTC GGGATAGATC TATATAAGCC GTCTCTTCGC GTTGATTTAG ATCTACGATA AAGGATTTGA AACGGTTCCA TAGATCTAGG TAGAGGATGA TGGGCGGGCG GTGTAGATCT ATGCTAAGGG TCTATTACAG GTGTTGTAGA TCTAGGTCAT GTTGTGGCAA GAGAATAATT AGATCCGAGC TCGGTACCAA GCTTGATGCA TAGCTTGAGT ATTCTATAGT GTCACCTAAA TAGCTTGGCG TAATCATGGT CATAGCTGTT TCCTGATGAA AACGGCCGCG CACCGCACCC GCAGCCCAGA CCCGACCACA CAGCGAGCGC GCACCACAGC GCGCGGGGCA GAGCCAGCGC GGCCAGGACA CCTGCGACGG ACCACAACAC AAGCCAGCGA CCACACCCAC ACACCCACCC GCACACCACC AACACGCCGC CCGCACAAGC GCACCAAAAA CGGA // ID R25_0_0000326 standard; DNA; UNC; 807 BP. XX AC R25_0_0000326 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000326 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009f05.f1; XX FH Key Location/Qualifiers FH FT source 1..807 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000326_A XX SQ Sequence 807 BP; 441 A; 143 C; 87 G; 136 T; 0 other; TGGGGGAAAA TCGCAGTGAT GTATACGTTC ACTATAGGGC GAATTGGGCC CTCTAGCATC ATGCCGAGCG GCGCCAGTGT GATGGATATC TAGCAGAATT CCAGCACACT GGCGGCCGTT ACTAGTGGAT CCGAGCTCGG TACCAAGCTT GATGCATAGC TTGAGTATTC TATAGTGTCA CCTAAATTGC TTGGCGTAAT CATGGTCATA GCTGTTTCCT GTGTGAAAAG CGCGAGGTGT TAACCCAGAC ATAACGAGCG TAATAATACA CAGAAACACG ACCAGAAATT TTTAAACAAA AACTAAAAAT AACAAAAATC CAAAAAAACA ATACTATCAA AAAATAACAA ACAAATAATG CAAATAACAC TCAAAAACAC AAAATATAAA AGAATAAAAT AATAAAACCA TCACTCAAAA ATAAATAAAT AAAAAAATCA TAATAAAAAA AATCAATGAT AAAAACATAC AATTACAACA AACAAAAAAA AAAAAAAAAA AAAAAAAACA AAATAAAACA AAACAAAAAT AACAAAAACA AACAAAAAAA TAAAAAAACA TAAAAAAAAA TATATAAATA CAACAAAAAA AAAAAAAAAA AAAGCCACTC AAACAATCAT AACATAATGA CAAAAACAAA AACAATAATA AAACAAAAAT TTCATAACAA GAAATACACA AACAAAACAA CAACAAAACA AAAAAAACAA AAAAACAATT ACAAAGTCCA CTCATACTAA CACACAACAA CTATCAGAGA CAAAACCAAC GAGACAATAA CCAACAAAAC ATTTAAAAAA AAAAAAA // ID R25_0_0000327 standard; DNA; UNC; 291 BP. XX AC R25_0_0000327 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000327 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009f07.f1; XX FH Key Location/Qualifiers FH FT source 1..291 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000327_A XX SQ Sequence 291 BP; 79 A; 70 C; 70 G; 68 T; 4 other; TATTATACGG ATCATATAGG GCGATGGGCC TCTAGATGCA TGCTNCGAGC GGCGCAGTGT GATGGATATC TGCAGAATTC CCATGGGNCA ANCCACGTTG GCGGGGCCGG GTTAACGTAA AGTTGGGACN TCCTTAAGGC TTTAATGTAA CAGGAGGCGT TCAATTCTTT AACGCTACGG AAAGTCGTAA ATCGCGCCAC CTCCCCCGTC AAGTCGACAT CTAGACTCTA CACAACTTAA TGCGCTTGTA TCGACCATAG ATCTTAACCG TTCAAAGGGA AAAACAACCA C // ID R25_0_0000328 standard; DNA; UNC; 850 BP. XX AC R25_0_0000328 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000328 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009f08.f1; XX FH Key Location/Qualifiers FH FT source 1..850 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000328_A XX SQ Sequence 850 BP; 419 A; 218 C; 79 G; 133 T; 1 other; AGCACAGGAC TAACCCAGCA GTGAATTGTA TACGACTCAC TATAGGGCGA ATTGGGCCCT CTAGATGCAT GCCGAGCGGC TGCAGTGTGA TGGATATCTT GCAGAATTCC AGCACACTGG CGGCCGTAAC TAGTGGATCG AGCTCGGTAC CAAGCTTGAT GCATAGCTTG AGTATTCTAT AGTGTCACCT AAATAGCTTG GTGTAATCAT GGTCATAGCT GTTTCCTGTG TGAAAATCCC TGCAGAATAC ACCCCAATCA ATCCACGAAA AATATTACTA CACACCCAAG CATCAGACAC ACAAAACAAA ACATAACAAA AAACCAACAT ACAAATCAAT CAAACAAAAA ATAAAAAACA CACACAACAA AACACACAAC ACAAAACAAA AAAAACATAC AAACAACAAA AACAACAAAA CAACACAACA ACAACAAAAA AAAAAACATA TATAATTACT CAAATAAAAC GACGTGCCAA ACGACTAAAC AATAAACAAC CACAAAATAA AATAAAACTA AAAAACAAAA AAAAACACAA CTCATACTAA ACATCAACGA AGACAACAAA ACAGAATATA CAGAAAATAC GCGCAAATAA CAACACATCT CACCCATCCA AAACTAATAA ATAACAAAAC TACCAAACAA CCCAAACCTA AACAACAACA ATACCAATCT AAACCACTAA ATCTCTATCA CAATCACACA ACAAACCTAC ACAACACACA ATAATAAAAT AACAACACCC AACAAAATCA CGAATAACAC AACACACACA AAAAATAACT ATAAGACACT ACAATAAATA CACCACCACT CACAACAACT CTACAATACA CTAACACAAN // ID R25_0_0000329 standard; DNA; UNC; 997 BP. XX AC R25_0_0000329 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000329 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009f09.f1; XX FH Key Location/Qualifiers FH FT source 1..997 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000329_A XX SQ Sequence 997 BP; 433 A; 282 C; 152 G; 130 T; 0 other; CACACACACG CATAATAATA GCAGTGAATG TATACGTCTC ACTATAGGGC GAATTGGGCC CTCTAGATAC ATGTCGAGCG GCCGCAGTGT GATGGATATC TGCAGAATTC CAGCACACTG GCGGCCGTTA CTAGTGGATC CGAGCTCGGT ACCAAGCTTG ATGCATAGCT TGAGTATTCT ATAGTGTCAC CTAAATAGCT TGGCGTAATC ATGGTCATAG CTGTTTCCTG TGTGAAAAGG CACGCGACAC CACCAAGTCG CCACACCCGC GGCCCCGCCC CACCCATCAC CCCGAGAGCG GACACACAAG CCGACCAGCG ACAACAACAA ACAACAAAAA GTGCCCCAAT AATAAACACA AGACCGCACA AAACACACAG TACCACCGCC AACAACCAGC GACCGCCACA CTACGCGCCA ACCCACACCG ACTTACAATA AAGCAACAAC AATCACTACA CTCAAAAGCT AACAGCACAC AGAAAAGCCA CGACAAAGAC GCGGAGACAC AGTAGTCGAG GGAGACCCCC ACGCGAAAAA ACAGACACAC AAAAACCAGA CACACAAAAG ATGCAGAAAG AAACACAAAG CGAAGAAACA CAAACAACAC AAAAACGACA CACAAGAAAC AGGAAAGAAT CAGATCATAC ACAAGCACCA CAATATGACA ACATCAAAAC GAAGCACAGA GAAAACGATA GCAAGAACCA AAAAACAGAA AAGACATAAC ACACAAGAAA TCAACAACAC CACACACATA GACTAAATAC AAACATAACT CACCGTCAGT AACATCATAA TCACTGACAA CAAATCTACC ACACATACTA ACTATAACAA AAATATCAGT CAAACCACAG ACGTACAAAC AACGATACAC TATCAATAAA CATAACACCA AATGTAACAT AACACAGAAA ACATGACCAC TGACTACAAT AGTAACAAAT ATACAAAAAC ACACACACAA AAATAATCAT AACACATGAC GAACAAT // ID R25_0_0000330 standard; DNA; UNC; 625 BP. XX AC R25_0_0000330 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000330 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009f10.f1; XX FH Key Location/Qualifiers FH FT source 1..625 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000330_A FT misc_binding 140..174 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000330_1" FT /note="Base quality score is 6.3139e-02" FT misc_binding 174..208 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000330_2" FT /note="Base quality score is 2.0917e-02" FT misc_binding 208..241 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000330_3" FT /note="Base quality score is 4.1497e-02" FT misc_binding 241..274 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000330_4" FT /note="Base quality score is 7.0047e-02" FT misc_binding 274..309 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000330_5" FT /note="Base quality score is 5.9865e-02" FT misc_binding 309..342 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000330_6" FT /note="Base quality score is 8.2153e-02" FT misc_binding 342..377 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000330_7" FT /note="Base quality score is 6.8468e-02" FT misc_binding 377..410 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000330_8" FT /note="Base quality score is 5.1460e-02" FT misc_binding 410..445 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000330_9" FT /note="Base quality score is 5.2597e-02" FT misc_binding 445..478 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000330_10" FT /note="Base quality score is 6.2964e-02" XX SQ Sequence 625 BP; 175 A; 167 C; 136 G; 147 T; 0 other; CCGCGCCCGC CCATACTCGC AGTGAATGTC ATCGCGTGAC ACTATAGGGC GAATCGGGCC TCTAGATACA TGTCGAGCGG CGCACAGTGT GATGGATATC TGCACGAATT CCAGCACACT GGCGGCCGCT ACTAGATGGA TCTAATACTA CACTGATAAC TACCATAACT TAGATCTAAG GACCGAGCGT CCCAACATAA CGCCTAGATC TACGGCTCCG CTGCAGGTCT AACATTCTAG ATCTAGCAGT GCCACGCTCG CAAAAAAACA TAGATCTATT TGTCTATGTG TATCGCGGTT GAAGCTCGAT CTATCCCGGT TTCTCACTCC ACGGCTTGTA GATCTAATCT AGGACAGGCC CGTGCTACAC AACTAGATCT AATGAGCGCG ATATACGCCT CTTCGCTAGA TCTAAACAAT CGGAAGCACT ACCGCGGATG TAAGATCTAT GGCCCCAGAT ACTCGGAAGT CATCTAGATC CGAGCTCGGT ACCAAGCTTG ATGCATAGCT TGAGTATTCT ATAGTGTCAC CTAAATTGCT AGGCGTAATC ATGGTCATAG CTGTTTCCTG TGTGAAAATC CCGCCAGGGT AACCCCAAAC AAAAGCGACA AGATAACCAC AATAA // ID R25_0_0000331 standard; DNA; UNC; 757 BP. XX AC R25_0_0000331 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000331 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009f11.f1; XX FH Key Location/Qualifiers FH FT source 1..757 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000331_A XX SQ Sequence 757 BP; 387 A; 146 C; 85 G; 139 T; 0 other; TGCACGCGGC GTTCAACCCG CCTGATGTAT ACGAGTCACT ATAGGGCGAA TTGGGCCCTC TAGAATCATG CTCGAGCGGC GCCAGTGTGA TGGATATCTG CAGAATTCCA GCACACTGGC GGCCGTTACT AGTGGATCCG AGCTCGGTAC CAAGCTTGAT GCATAGCTTG AGTATTCTAT AGTGTCACCT AAATAGCTTG GTGTAATCAT GGTCATAGCT GTTTCCTGTG TGAAAAGCGC GACAGAGTTT CTCCAGATAA GAGCGACAGT TAATCCCAAC TAAAATCGTA AACAAAAACA CAATATAGAA ATAAAACAAA ACACAAACTC AAACAACTCA CACAAATCAT AATAATATAT AAAATAACTA AAAACAAAAA TAAACACATA TTCATCAAAC AAAAAACAAA TATAAAAAAT AATCAATACT CAATTCAAAA CCAGATAACC ACCCCAAGAT ACAACAAAAA ACAACACACA ATACAAAAAA AATAAATAAT TAAAAAAGAA TAAATAATAT AAATACTTCT CACATCAAAA AAAAAAAAAC ATAACAAAAA AAAAACATAT TAATCACACA CACAAACACA CAAAATACAA AATAAAACAA TATAAAAAGA AACACAAAAA AAGAACAACA AAAACTAAAA AACAAACATA AATACATATA AATAACAATA AAAAAACAAA ACAAAAAAAC AAAAATAAAA AAAAAGAAAA AAGCAATAAA AAATAGTCTA ATTCGAACGC CCAAAAA // ID R25_0_0000332 standard; DNA; UNC; 246 BP. XX AC R25_0_0000332 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000332 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009f12.f1; XX FH Key Location/Qualifiers FH FT source 1..246 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000332_A XX SQ Sequence 246 BP; 57 A; 56 C; 72 G; 61 T; 0 other; GCTCGCGCGC CGGCAAACTC AGTGAGTGTA TACGAGTCAC TATAGGGCGA ATAGGGCCCT CTAGCATCAT GCTCGAGCGG CGCCAGTGTG ATGGATATCT GCAGAATTCC AGCACACTGG CGGCGTTACT AGTGGATCGA GCTCGGTACC AAGCTTGATG CATAGCTTGA GTATTCTATA GTGTCACCTA AATAGCTTGG CGTAATCCTG GTCATAGCTG TTTCCTGTGT GAAAATGGCG AGAGGG // ID R25_0_0000333 standard; DNA; UNC; 788 BP. XX AC R25_0_0000333 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000333 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009g03.f1; XX FH Key Location/Qualifiers FH FT source 1..788 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000333_A FT misc_binding 113..146 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000333_1" FT /note="Base quality score is 6.0982e-04" FT misc_binding 146..179 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000333_2" FT /note="Base quality score is 2.5103e-04" FT misc_binding 179..212 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000333_3" FT /note="Base quality score is 5.7124e-04" FT misc_binding 212..245 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000333_4" FT /note="Base quality score is 3.3072e-04" FT misc_binding 245..278 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000333_5" FT /note="Base quality score is 5.2978e-03" FT misc_binding 278..311 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000333_6" FT /note="Base quality score is 1.5228e-02" FT misc_binding 311..344 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000333_7" FT /note="Base quality score is 6.7322e-03" XX SQ Sequence 788 BP; 324 A; 184 C; 137 G; 143 T; 0 other; GAATGTATAC GATTAACTAT AGGGCGAATT GGGCCCTCTA GATGCATGCT CGAGCGGCGC CAGTGTGATG GATATCTGCA GAATTCCAGC ACACTGGCGG CGTAACTAGT GGATCTACTT AATTGACTAC CGACCTCCGC TATAGATCTA TACACAACCC GCGCTCTTAT CATCTTAGAT CTAGTGTGCT GAGTTCGGTC TTTTAGTTTA GATCTAAAAA GACTTATCAA GCGAAACAAA ATAGATCTAA CCACCCAATC CTAATGCCAA GCGTTAGATC TAGGCCGATC AGTGCGGTAC ATGCGTGTAG ATCTAGCCAA CAACTAGACT AACAGAGTCC TAGATCCGAG CTCGGTACCA AGCTTGATGC ATAGCTTGAG TATTCTATAG TGTCACCTAA ATAGCTTGGC GTAATCATGG TCATAGCTGT TTCCCTGTGT TGCAAAGGCC GCACGGATAA AAACAAAAAG AAAAGAAACA GGCCGAACAC CCATAAAAAT CAAAACAGGA AAACAACAAA CCGAGTAGCA GACAAATCCA AAACATTAAA TAAGGACGCT AACGACACCA ACGCCATCTC AAACAAAGTA AAAACAACCA GGTAAAGACA GCGAAAAGAA TAGGGAACAA GAAACCAAAA CTAAAAACAC AACAAAACAC CAAAAAACAC AAACACCAAA ACAAAAACAA AAAAAAACAA AGAACAGAAA AACAGAAACT GACACTCAAG ACATAACACA CACCAACCCA CAACTTAAAT ACATACACAA GACCAAAGAC AAAAAAAG // ID R25_0_0000334 standard; DNA; UNC; 856 BP. XX AC R25_0_0000334 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000334 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x010b02.f1; XX FH Key Location/Qualifiers FH FT source 1..856 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000334_A FT misc_binding 121..154 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000334_1" FT /note="Base quality score is 3.5201e-03" FT misc_binding 154..187 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000334_2" FT /note="Base quality score is 2.5642e-03" FT misc_binding 187..220 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000334_3" FT /note="Base quality score is 1.0777e-03" FT misc_binding 220..252 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000334_4" FT /note="Base quality score is 8.4628e-05" FT misc_binding 252..285 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000334_5" FT /note="Base quality score is 7.8553e-04" FT misc_binding 285..318 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000334_6" FT /note="Base quality score is 5.4429e-03" FT misc_binding 318..351 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000334_7" FT /note="Base quality score is 2.6393e-03" XX SQ Sequence 856 BP; 354 A; 198 C; 173 G; 130 T; 1 other; AAATCGCATG AATGTATACG ATCACTATAG GGCGAATTGG GCCCTCTAGA TGCATGCTCG AGCGGCGCCA GTGTGATGGA TATCTGCAGA ATTCCAGCAC ACTGGCGGCG TTACTAGTGG ATCTAGGTGG CTATAGTCGC GTTGGTATGT TAGATCTACC TACGTTGCCA CCGAGAAACC GGCTAGATCT AACAGGCGAA GTAAAGACGA AACAAGTAGA TCTACAACTT ACGAATGTCG CCGCCAATTA GATCTATCTG TTGCAGCCAT TCACTCGCCC TTAGATCTAA ATAATAACCA ACTTCACTCT GGTATAGATC TAGGAAAAGG TGATACGAAA ACGAATATAG ATCCGAGCTC GGTACCAAGC TTGATGCATA GCTTGAGTAT TCTATAGTGT CACCTAAATA GCTTGGCGTA ATCATGGTCA TAGCTGTTTC CCTGTGTGAN AGCTGACGAA GCACATCAAC ACACACACAA CACACGAAGA CACCAAAAAC AATAAAAAAA AAACAAAACA ACCACAAACA AAACCAAAAA AAACACAAAA CACACACACA AAAAAGAAAA ACAAAACAAC AAACAAACAA CCAAAAAAAA AACAAAAAAA AAAAAAAAAA AACAACACTG CTGACGCAGC ACCGTAAGCA CAGACAACGA AGACAGAAAA AAGAAACAAA AAGCGCCGCA GGCAAGTAGC GGCATAGCCC AAAGGAGACA GGTACAGAAA CAGAAGAAGC GAGCAGAAAC AAGGCGACGA CAACAATGCA GCGGTAGAAA CAAATGAAGT GAGAGGCACG CGAGAGAGCG AAGAAGACAC GAACACACAA CCACGAAACC CGCAGCAGCC ACACCA // ID R25_0_0000335 standard; DNA; UNC; 405 BP. XX AC R25_0_0000335 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000335 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x010h03.f1; XX FH Key Location/Qualifiers FH FT source 1..405 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000335_A FT misc_binding 125..159 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000335_1" FT /note="Base quality score is 5.4926e-02" FT misc_binding 159..192 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000335_2" FT /note="Base quality score is 8.0238e-04" FT misc_binding 192..225 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000335_3" FT /note="Base quality score is 1.5077e-02" FT misc_binding 225..258 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000335_4" FT /note="Base quality score is 6.3330e-02" FT misc_binding 258..292 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000335_5" FT /note="Base quality score is 3.0895e-02" XX SQ Sequence 405 BP; 107 A; 82 C; 106 G; 110 T; 0 other; AGGTTTAACG GCAGGAATGT ATACGACTCA CTATAGGCGA ATTGGGCCCT CTAGATGCAT GTCGAGCGGC GCCAGTGTGA TGGATATTAG CAGAATTCCA GCACACTGGC GGCGTTACTA GTGGATCTAT ACGGGCAGTG CTTATTTCGA ATAGTTAGAT CTTAATCGGC GGTGTGAGCT ATAGGCCGTA GATCTATGAG TCCTCCTCAC CCACGCGAAT GTAGATCTAC GTAGCGTGAA GTGGCGAATA TAGGTAGATC TACTTTAGAG GTCTCCGTTC TCCGATAATA GATCCGAGCT CGGTACCAAG CTTGATGCAT AGCTTGAGTA TTCTATAGTG TCACCTAAAT AGCTTGGCGT AATCATGGTC ATAGCTGTTT CCTGTGTGAA AAGGGCAACA AAAAA // ID R25_0_0000336 standard; DNA; UNC; 857 BP. XX AC R25_0_0000336 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000336 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x009g08.f1; XX FH Key Location/Qualifiers FH FT source 1..857 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000336_A FT misc_binding 125..158 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000336_1" FT /note="Base quality score is 2.6856e-03" FT misc_binding 158..191 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000336_2" FT /note="Base quality score is 4.6294e-03" FT misc_binding 191..224 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000336_3" FT /note="Base quality score is 1.2514e-03" FT misc_binding 224..257 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000336_4" FT /note="Base quality score is 1.7557e-03" FT misc_binding 257..290 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000336_5" FT /note="Base quality score is 7.7569e-03" FT misc_binding 290..323 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000336_6" FT /note="Base quality score is 9.2058e-03" FT misc_binding 323..356 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000336_7" FT /note="Base quality score is 4.4594e-02" FT misc_binding 356..389 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000336_8" FT /note="Base quality score is 2.1066e-02" FT misc_binding 389..423 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000336_9" FT /note="Base quality score is 7.3272e-02" FT misc_binding 423..456 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000336_10" FT /note="Base quality score is 6.9773e-02" FT misc_binding 456..488 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000336_11" FT /note="Base quality score is 2.8507e-02" XX SQ Sequence 857 BP; 235 A; 222 C; 204 G; 196 T; 0 other; ACAACTGCAG TGAATTGTAT ACGATTCACT AATAGGGCGA ATTGGGCCCT CTAGATGCAT GTCGAGCGGC GCCAGTGTGA TGGATATCTG CAGAATTCCA GCACACTGGC GGCGTTACTA GTGGATCTAA TTATGCCAAT CATCTCTGTA GCCGTAGATC TAGCACGACT CAGCCTACCC TCTTCTGTAG ATCTAGGTTC GGCCGTGAGC TCAAATTTCA TAGATCTATC GACGAATCAG CAAGGTGGCG CTATAGATCT ATAGACTAGG TAGAGTGCGT CTGCCCTAGA TCTAAGGGTC CGGGGATGAG AGGGGTTGGT AGATCTAAAT CCGAGCTAAG GGATATGGTT GGTAGATCTA AAAAAACTGC TTACCCCCTC ATGGCTAGAT CTAGTGAGTG CCGCGGACTC GCGGCCTGTA GAATCTAAGA TGGGGCTTAC CTCGTGGAGC TCTAGATCTA CTAATGCGGT TGGTCGCTTT GGGGATAGGA TCCGAGCTCG GTACCAAGCT TGATGCATAG CTTGAGTATT CTATAGTGTC ACTAAATTGC TTGCGTAATC ATGGTCATAG CTGTTTCCTG TGTGAAAACG CCGCCAGTGA TCCACCAGAG ATACGCGCGT CGTGTACTCA CACACTTAAA GATCAGATGA CCTCCCTCAG CAACCAGGAT ACCATCACAT CACTGCACAC ACAGACCGAC ATCTACCACT CACGCATCTT TACACTAAAC ACACCACCCG ACGCACCCAG CCAGCACATA ATCGAGACTA GCACAACAGA ACAGAGACTT ACTACGGAGA CGCAAACGGA CGCACTAAGA ACCAACATGC ATCGCACGCC GACGACTATC GACCGCA // ID R25_0_0000337 standard; DNA; UNC; 908 BP. XX AC R25_0_0000337 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000337 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x010h06.f1; XX FH Key Location/Qualifiers FH FT source 1..908 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000337_A FT misc_binding 164..196 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000337_1" FT /note="Base quality score is 1.8280e-02" FT misc_binding 196..229 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000337_2" FT /note="Base quality score is 1.8691e-04" FT misc_binding 229..262 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000337_3" FT /note="Base quality score is 1.1502e-04" FT misc_binding 262..295 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000337_4" FT /note="Base quality score is 2.4954e-04" FT misc_binding 295..328 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000337_5" FT /note="Base quality score is 9.0353e-03" FT misc_binding 328..361 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000337_6" FT /note="Base quality score is 3.8751e-03" XX SQ Sequence 908 BP; 285 A; 207 C; 242 G; 174 T; 0 other; ACAACACCAC CCTACCCAGT CAACCTGCAT AGATAGTGTT GTTATATCGC AGTGATGTCT ACGTGTCACT ATAGGGCGAA TTGGGCCTCT AGAGTACATG CTCAGCGGCG CCAGTGTGAT GGATATCTGC AGAATTCCAG CACACTGGCG GCGTTACTAG TGGATCTAAG ATAAAATAGG CGCTGGCGCA CGTAGATCTA GATAACGGAA CCTTTTTTTA ATTTATAGAT CTACGGTGAT GTAGCCCGCA GGCTTAGCTA GATCTACATG CTGTTCCTTA CGTTCAGGCC CTAGATCTAG GGAGGGGTGG GGTGCAGGTG AATATAGATC TATTTCTTAC AAAATCACTC TTAATACTAG ATCCGAGCTC GGTACCAAGC TTGATGCATA GCTTGAGTAT TCTATAGTGT CACCTAAATA GCTTGGCGTA ATCATGGTCA TAGCTGTTCC TGTTTGAACA GCCACCGGCA TCCCCGTGAA AAAATTCGGG ACTCCCCAAA CACACAAACA CACACAACCC CTTCCACCCT ACACCACACC CAACGCCAAC CCCCCAACCC GAGATAATAC GTACACTCGC AAGAACATAA GAAACATTGG GCACATATCT CACGAATACA TCGTAAGATG AAGCGGCGAT AAGAAGAGTA AGGATGCAGC AGAAGGTCGG AGAGGGTCAG GCGGATGATG AGGTAGGAAG AGGAGTGAGA AAAACCAACG TAAACAAAGA GAGAAGGGGT AGCCGTAGAA GGATCCAGCG ACTGAGGGAC GAGATAAGGA GAGGCGAGCA GAAGAGGATC GGAGGAGGAG GAGGAGAGCT ACGAGAGAGG CACAGACGGC AGAGGAGACG CGAGAGAGCG AAGCAGAGTA GGCACAGACG TGCAGCCCCA CGTCACTACA AGAAACGA // ID R25_0_0000338 standard; DNA; UNC; 864 BP. XX AC R25_0_0000338 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000338 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x010h10.f1; XX FH Key Location/Qualifiers FH FT source 1..864 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000338_A FT misc_binding 126..159 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000338_1" FT /note="Base quality score is 2.1916e-03" FT misc_binding 159..192 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000338_2" FT /note="Base quality score is 2.0742e-02" FT misc_binding 192..225 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000338_3" FT /note="Base quality score is 1.4894e-02" FT misc_binding 225..258 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000338_4" FT /note="Base quality score is 1.7094e-03" FT misc_binding 258..291 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000338_5" FT /note="Base quality score is 3.5043e-02" FT misc_binding 291..324 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000338_6" FT /note="Base quality score is 1.4172e-02" FT misc_binding 324..357 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000338_7" FT /note="Base quality score is 1.1279e-02" FT misc_binding 357..390 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000338_8" FT /note="Base quality score is 1.6147e-03" FT misc_binding 390..423 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000338_9" FT /note="Base quality score is 1.0786e-02" FT misc_binding 423..456 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000338_10" FT /note="Base quality score is 1.0645e-02" XX SQ Sequence 864 BP; 274 A; 273 C; 128 G; 187 T; 2 other; TGGAAAAATG CGTGAATGTA TACGATTCAC TATAGGGCGA ATTGGGCCCT CTAGATGCAT GCTCGAGCGG CGCAGTGTGA TGGATATCTG CAGAATTCCA GCACACTGGC GGCCGTTACT AGTGGATCTA AATTTAATTA ATTATATATG CGCGCTAGAT CTATTACTTG AAAAGTTGTT TGTCAATGTA GATCTAGCGC TTGCCACTCC ATGTATTTTA TTAGATCTAA CGCCCACGCT GAACGTCACG ATCCTAGATC TAACAAACAC TCTTCCGAGG CGCGCCCTAG ATCTACGTAA TGGACCCACG TACACGCCAT TAGATCTAAT TACAGGAGCA TAACGTCAGA CGGTAGATCT AAACGCGCCT CTCCGAACAG AATCCATAGA TCTATGCCGA CCACTCACAA AAGCATACTT AGATCTATCT TCCGCTAGGT TAAGGCCATA ATTAGATCCG AGCTCGGTAC CAAGCTTGAT GCATAGCTTG AGTATTCTAT AGTGTCACCT AAATAGCTTG GCGTAATCAT GGTCCTAGCT GTTTCCTGGT GAAAAGCCCC ACACCTTCAC CACCACCCAC CACCCCACAC CTCCCCCCCC CCCACCACAC GCAACTCCCA TCGACCACTA CCTCCACCAC TAAACCATCT AAAACCAACC CTACGACCAC ACAAACCACC AACTAATACC GAAACACACA ACCCACCCAC AACACTAACA ACTATAACTA ACACACCACA CTAACAGTAA CTCGACGTAA CAAACCGACG TACAAAAACA TACCTAACTA ATACCAACCA AACTCACCCA CGACATCTAC ATCCCTTACA CCAACACACA TACCCACCAT CTATCACACC CNCN // ID R25_0_0000339 standard; DNA; UNC; 646 BP. XX AC R25_0_0000339 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000339 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x012f09.f1; XX FH Key Location/Qualifiers FH FT source 1..646 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000339_A FT misc_binding 117..150 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000339_1" FT /note="Base quality score is 6.6406e-02" FT misc_binding 150..182 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000339_2" FT /note="Base quality score is 9.2124e-03" FT misc_binding 182..215 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000339_3" FT /note="Base quality score is 4.4603e-03" FT misc_binding 215..248 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000339_4" FT /note="Base quality score is 3.1305e-03" FT misc_binding 248..281 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000339_5" FT /note="Base quality score is 4.5993e-02" FT misc_binding 281..315 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000339_6" FT /note="Base quality score is 3.7142e-02" FT misc_binding 315..349 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000339_7" FT /note="Base quality score is 2.5765e-02" FT misc_binding 349..382 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000339_8" FT /note="Base quality score is 4.2157e-02" FT misc_binding 382..415 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000339_9" FT /note="Base quality score is 5.1959e-02" FT misc_binding 415..448 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000339_10" FT /note="Base quality score is 3.4480e-02" FT misc_binding 448..481 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000339_11" FT /note="Base quality score is 6.4642e-02" FT misc_binding 481..514 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000339_12" FT /note="Base quality score is 1.4802e-01" FT misc_binding 514..547 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000339_13" FT /note="Base quality score is 2.1554e-01" FT misc_binding 547..580 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000339_14" FT /note="Base quality score is 1.7313e-01" XX SQ Sequence 646 BP; 176 A; 128 C; 175 G; 167 T; 0 other; ATGATGTCAT ACGTATCACT ATAGGGCGAA TTGGGCCCTC TAGACTCATG CTCGAGCGGA CGCCAGTGTG ATGGATATCT GCAGAATTCC AGCACACTGG CGGTCGTTAC TAGTGGATCT AGGGCACGGA ACCGTCATAA TCTCAATAGA TCTAATCTCG GCAGTGAGGG GTCGTTAATA GATCTACGTT AGACTGGAGG GTGGGGTTGG GTAGATCTAG TCGGCTGCGG AAGGTCGGCA GTCATAGATC TAGCTCGGGC AGGTGGATTA ATAGTTGTAG ATACTATGAT TGGAACGGAC TTGAAGCTAT GTAGATCTAA TTGGATTTGC GACGTCTTCT AGGACTAGAT CTAGCAGTCC AACGGATATT GGCGTCAGTA GATCTAGTAG AAGCGTAAGG AACCAGGGTA TTAGATCTAT TCGAGCGGGA GTGGCAATAC CCTGTAGATC TATTCTGAAT TTCTGGGTAG CGTATACTAG ATCTAGGCAC CAAGCCATTC TTTTGACACA TAGATTTACA AAAATCGACA CACCGTCTCG AAATAGATCT ACCTGGACCA GGCACGATAA ACAGACTAGA TCCGAGCTCG GTACCAAGCT TGATGCACAG CTTGAGTATT CTATAGTGGG ACCACAATAG CTTGGG // ID R25_0_0000340 standard; DNA; UNC; 632 BP. XX AC R25_0_0000340 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000340 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x012f08.f1; XX FH Key Location/Qualifiers FH FT source 1..632 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000340_A FT misc_binding 114..147 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000340_1" FT /note="Base quality score is 1.0900e-03" FT misc_binding 147..180 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000340_2" FT /note="Base quality score is 6.9951e-04" FT misc_binding 180..213 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000340_3" FT /note="Base quality score is 4.5558e-03" FT misc_binding 213..246 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000340_4" FT /note="Base quality score is 4.9637e-03" FT misc_binding 246..279 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000340_5" FT /note="Base quality score is 1.6301e-03" FT misc_binding 279..312 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000340_6" FT /note="Base quality score is 1.4302e-02" FT misc_binding 312..345 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000340_7" FT /note="Base quality score is 2.4810e-02" FT misc_binding 345..378 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000340_8" FT /note="Base quality score is 4.1500e-02" XX SQ Sequence 632 BP; 186 A; 169 C; 128 G; 149 T; 0 other; TGATTGTAAC GATTCACTAT AGGGCGAATT GGGCCCTCTA GATGCATGCC GAGCGGCCGC CAGTGTGATG GATATCTGCA GAATTCCAGC ACACTGGCGG CCGTTACTAG TGGATCTAGA CACACGTACA GGAACCGTAA ATTTAGATCT ACAGGGTACC GCGGCATCAA CCGGTATAGA TCTACGCCGT CGCGATGACG AAGAAGTATT AGATCTATCC CGATGGGAAG CCAGTATTAC AGTAGATCTA CCGCGGCCAT GAAACGGTAT GCTCTTAGAT CTACACCCAG CCTTCCCCTG CGCGACGTTA GATCTACTAC TAGCCTCATA CAATCACTTT TTAGATCTAG TTGTTTCGTG AGTATAAGTA GCGGTAGATC CGAGCTCGGT ACCAAAGCTT GATGCATAGC TTGAGTATTC TATAGTGTCA CCTAAATAGC TTGGCGTAAT CATGGTCATA GCTATTTCCT GTGTGAAAAT CGCGAGAGTT TACCACGAAT AAACGGCAGG TTCACCCAGT CACCATGACA AAATAACAAA CATCACACAC CCGCTTATCC CCTAATACCA CAACGAAACC CCAAACCACA CATCAACAAC AAACCTCCTT ACACCAATCG CCCACATTCA CA // ID R25_0_0000341 standard; DNA; UNC; 582 BP. XX AC R25_0_0000341 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000341 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x012f04.f1; XX FH Key Location/Qualifiers FH FT source 1..582 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000341_A FT misc_binding 116..149 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000341_1" FT /note="Base quality score is 4.6132e-02" FT misc_binding 149..182 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000341_2" FT /note="Base quality score is 2.2176e-02" FT misc_binding 182..215 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000341_3" FT /note="Base quality score is 3.5759e-02" FT misc_binding 215..248 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000341_4" FT /note="Base quality score is 6.5655e-03" FT misc_binding 248..281 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000341_5" FT /note="Base quality score is 1.2419e-02" FT misc_binding 281..314 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000341_6" FT /note="Base quality score is 6.2326e-02" FT misc_binding 314..347 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000341_7" FT /note="Base quality score is 4.2292e-02" FT misc_binding 347..380 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000341_8" FT /note="Base quality score is 2.0976e-02" FT misc_binding 380..413 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000341_9" FT /note="Base quality score is 6.8964e-03" FT misc_binding 413..446 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000341_10" FT /note="Base quality score is 8.6807e-03" XX SQ Sequence 582 BP; 164 A; 112 C; 157 G; 149 T; 0 other; AATTGTATAC GTCTCACTAT AGGGCGAATT GGGCCCTCTA GAATACATGC TCGAGCGCGC GCAGTGTGAT GGATATCTGC AGAATATCCA GCACACTGGC GGCCGTTACT AGTGGATCTA AAGTGGCGTG ACGTACCTTA GTTTATAGAT CTAGCCAGAG CTATGCAGGG CGACTTCTTA GATCTAATGT TAATCGGGGC ACAGGCAGGG ATAGATCTCT TGGGCGGTAA CTGCTCGAGA GAAATAGATC TAATAGGGGG AGGAGGGGCT GTTCGGATAG ATCTACATAC TTAAAGTGTC GTTATGGTCC TAGATCTAAT ACAACGGCCC GCTGAAGGCT CAATAGATCT AAGTTAGTCG TTAGTTATAC TTGCGCTAGA TCTACAGAAC GGCATCCGCC GATAGAGTCT AGATCTAGGC TTGTGGGGCT GGGATTCGAG TATAGATCCG AGCTCGGTAC CAAGCTTGAT GCATAGCTTG AGTATTCTAT AGTGTCACCT AAATAGCTTG GCGTAATCAT GGTCATAGCT GTTTCCTGTG TGAAAAGCAA GAGAGAATAC ACAGAGAAAA AAACACAAGG AA // ID R25_0_0000342 standard; DNA; UNC; 594 BP. XX AC R25_0_0000342 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000342 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x012f02.f1; XX FH Key Location/Qualifiers FH FT source 1..594 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000342_A FT misc_binding 93..126 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000342_1" FT /note="Base quality score is 4.5651e-03" FT misc_binding 126..159 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000342_2" FT /note="Base quality score is 1.6796e-04" FT misc_binding 159..192 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000342_3" FT /note="Base quality score is 1.7523e-04" FT misc_binding 192..225 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000342_4" FT /note="Base quality score is 2.3537e-04" FT misc_binding 225..258 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000342_5" FT /note="Base quality score is 4.4921e-02" FT misc_binding 258..291 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000342_6" FT /note="Base quality score is 1.3446e-02" FT misc_binding 291..323 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000342_7" FT /note="Base quality score is 4.6125e-04" FT misc_binding 323..356 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000342_8" FT /note="Base quality score is 5.8180e-04" XX SQ Sequence 594 BP; 171 A; 149 C; 126 G; 148 T; 0 other; TAGGGCGAAT GGGCCCCGTA GATACATGCT CGAGCGGCGC CAGTGTGATG GATATCTGCA GAATTCCAGC ACACTGGCGG CGTTACTAGT GGATCTATGC AGATATGGTA GAGGCTAGTA TTTAGATCTA GACAATCCCT AGACGGCACA AAACTTAGAT CTAGGGGTCT GTAATCACGG GTCAGTGGTA GATCTATCTC TACCAGTCTC GAATGTCGAA CTAGATCTAC TCAGCCCGTT GTCTTTCAGG ATTCTAGATC TATTCTCCCT GTGCCCGCAC GCCGCTCTAG ATCTAAGTTA CTAACGGAGG CTAGGAGGGT AGATCTAAAA TACACCCTGC AAAATTTCTA TCTAGATCCG AGCTCGGTAC CAAGCTTGAT GCATAGCTTG AGTATTCTAT AGTGTCACCT AAATCGCTTG GCGTACTCAT GGTCATAGCT GTTTCCTGTG TGAAAATCGC GCCGGGTTAC CCCCAGTAAA GACCGCCAGG TTCCACACAA GTAAGAACGC AACGTTTTTC ACCAATAACC ACACCACCTA TACCAAAACA CAAAACGATC AAACTATATT ACAACACAAT AACCCAGAAT ATCA // ID R25_0_0000343 standard; DNA; UNC; 635 BP. XX AC R25_0_0000343 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000343 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x012d09.f1; XX FH Key Location/Qualifiers FH FT source 1..635 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000343_A FT misc_binding 121..154 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000343_1" FT /note="Base quality score is 4.9423e-03" FT misc_binding 154..187 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000343_2" FT /note="Base quality score is 2.7535e-03" FT misc_binding 187..221 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000343_3" FT /note="Base quality score is 1.9011e-02" FT misc_binding 221..254 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000343_4" FT /note="Base quality score is 6.4449e-03" FT misc_binding 254..287 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000343_5" FT /note="Base quality score is 5.6900e-04" FT misc_binding 287..320 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000343_6" FT /note="Base quality score is 5.6464e-03" FT misc_binding 320..353 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000343_7" FT /note="Base quality score is 2.7508e-03" FT misc_binding 353..386 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000343_8" FT /note="Base quality score is 3.6411e-03" FT misc_binding 386..419 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000343_9" FT /note="Base quality score is 4.7494e-04" XX SQ Sequence 635 BP; 194 A; 148 C; 134 G; 159 T; 0 other; TGACGCGGAA TTGTATACGT ACTCACTATA GGGCGAATCG GGCCCTCTAG ATGCATGCCG AGCGGCGCCA GTGTGATGGA TATCTGCAGA ATTCCAGCAC ACTGGCGGCG TTACTAGTGG ATCTAGGACG GTTTAGGATT CTATGTGTAA TAGATCTAAG CGGCGAAGAG CGTACAGGTT TATTAGATCT ATGTGATCGC GTGACGATTG GCAAAAATAG ATCTACCGTC CGGGGATGGT ATCGGTAAAC TAGATCTAGG TAAAGCCCTT CTCACGATTC GCTTAGATCT ATAATACACC TCTATACACC TGAAGGTAGA TCTAACGAAG AACCAATGCG CGCATCCCTT AGATCTACAT ACTAAACCTG CCGCCTCCCC TTTAGATCTA CACTCCATCC TGTCTCTACC AGTTTTAGAT CCGAGCTCGG TACCAAGCTT GATGCATAGC TTGAGTATTC TATAGTGTCA CCTAAATAGC TTGGCGTAAT CATGGTCATA GCTATTTCCT GTGTGACAAT CTCGCCAGGG TTCACCAAGA CAAGAGCGAC AGGAATCACA CAATATAAGA AAGACATGTG TCAACAACTC AACAACACAC AACTTACAAA TATCAAAAAT AGAAACAATA AAAAC // ID R25_0_0000344 standard; DNA; UNC; 633 BP. XX AC R25_0_0000344 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000344 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x012d08.f1; XX FH Key Location/Qualifiers FH FT source 1..633 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000344_A FT misc_binding 110..143 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000344_1" FT /note="Base quality score is 7.1248e-03" FT misc_binding 143..176 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000344_2" FT /note="Base quality score is 1.3418e-03" FT misc_binding 176..209 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000344_3" FT /note="Base quality score is 2.2824e-03" FT misc_binding 209..242 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000344_4" FT /note="Base quality score is 2.3015e-03" FT misc_binding 242..275 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000344_5" FT /note="Base quality score is 2.5665e-03" FT misc_binding 275..308 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000344_6" FT /note="Base quality score is 2.7586e-02" FT misc_binding 308..341 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000344_7" FT /note="Base quality score is 9.4242e-03" FT misc_binding 341..374 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000344_8" FT /note="Base quality score is 8.8513e-03" XX SQ Sequence 633 BP; 197 A; 153 C; 127 G; 156 T; 0 other; TGATGTATAC GATTCACTAT AGGGCGAATT GGGCCCTCTA GATCATTCGA GCGGCGCCAG TGTGATGGAT ATCTGCAGAA TTCCAGCACA CTGGCGGCGT TACTAGTGGA TCTAGTCAAC GGTAGTGTAG AAGGCCTCGT AGATCTATAA TCCATATTAG TCGAACAGCA CCTAGATCTA TAAGGCGGCG GCAGTAGGGT TGTTTTAGAT CTATTGAGGC GGGCGAATTT GGGGGTCGTA GATCTAAGAT ATAAGCCGGA CAGACCCAGG ATAGATCTAA CATCGCATCG TGTTTGCGCC CTAATAGATC TATAACTTCC CGTCTAGCCG TATGCACTAG ATCTATTGAC AACACCATTC ATCTATCCTT TAGATCCGAG CTCGGTACCA AGCTTGATGC ATAGCTTGAG TATTCTATAG TGTCACCCTA AATTGCTTGG CGTAATCATG GTCATAGCTA TTTCCTGTGT GAAAAACGCA GACAGGTTCC ACCCATGACA AGACCGACAG TTTTTTCCCA CCATTACAGC ATACAAGCGT ACCCCATAAC ACAGCCACTA CTTCCACCAA CACAAAAACA CAAACTACAA CACATAACAA ACACAATAAA TAAATACAAA ACACCCAAAA AAA // ID R25_0_0000345 standard; DNA; UNC; 602 BP. XX AC R25_0_0000345 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000345 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x012d03.f1; XX FH Key Location/Qualifiers FH FT source 1..602 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000345_A FT misc_binding 109..142 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000345_1" FT /note="Base quality score is 6.5769e-02" FT misc_binding 142..175 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000345_2" FT /note="Base quality score is 6.9608e-02" FT misc_binding 175..208 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000345_3" FT /note="Base quality score is 5.6208e-03" FT misc_binding 208..241 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000345_4" FT /note="Base quality score is 8.2620e-03" FT misc_binding 241..274 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000345_5" FT /note="Base quality score is 2.5880e-03" FT misc_binding 274..307 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000345_6" FT /note="Base quality score is 4.3903e-02" FT misc_binding 307..340 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000345_7" FT /note="Base quality score is 5.9689e-02" XX SQ Sequence 602 BP; 189 A; 135 C; 140 G; 138 T; 0 other; TTGTATACGT GTCACTATAG GGCGAATTGG GCCTCTAGAT CATGCCGAGC GGCGCCAGTG TGATGGATAT CTAGCAGAAT TCCAGCACAC TGGCGGCGTT ACTAGTGGAT CTATCTATGC TTCTTTCAGA AGCGGATGTA GATCTACTAA TTAGAGTATG GCTGGTTGGT CTAGATCTAA ATTGCGCAAC TCTGGCCTAT TGGGTAGATC TAATATTGCG GCTATGGCTG GCCTAGTTAG ATCTAGAAGC GGCGAGATCA CGAAACATAG TAGATCTAGT CACACGATGC GCATCTAGAC GATTAGATCT ATAGGAATAT GACAGGCAGT GTGGAGTAGA TCCGAGCTCG GTACCAAGCT TGATGCATAG CTTGAGTATT CTATAGTGTC ACCTAAATAG CTTGGCGTAC TCCATGGTCA TAGGCTGTTT CCTTGTGTGA AATCGCGGCC AGGGATCCCC CAGCACGACC GCAAAGATAA CACCAACAAA CACCGCAACG GTATACAAAA GACAAACAAA GCACAGAACA CACATAAGAA CAAGTAAAAA CTACCACATC ACAAGCAAAC CAACACAGAA ACAACTACAC GCATGTAGAA CA // ID R25_0_0000346 standard; DNA; UNC; 645 BP. XX AC R25_0_0000346 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000346 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x012d02.f1; XX FH Key Location/Qualifiers FH FT source 1..645 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000346_A FT misc_binding 110..145 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000346_1" FT /note="Base quality score is 9.5517e-02" FT misc_binding 145..180 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000346_2" FT /note="Base quality score is 7.8875e-02" FT misc_binding 180..213 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000346_3" FT /note="Base quality score is 6.1257e-02" FT misc_binding 213..247 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000346_4" FT /note="Base quality score is 7.8417e-02" XX SQ Sequence 645 BP; 225 A; 137 C; 125 G; 157 T; 1 other; AATACGGTTC ACTATAGGGC GAATAGGGCC CTCTAGATAC ATTCCGAGCG GTCGCCAGTA GTGATGGATA TCTGCAGAAT TCCAGCACAC TGGCGGCCGT TACTAGTGGA TCTAATTGAG CCCTCCCACC TAAATATCCT TANGATCTAG ATCGAGGTCT AGCCCGGTTT GCTGCGTAGA TCTATTTGAG AAAGGGTATA GGTATAATGT AGATCTAACG CTGGGCCGGA AGCAGTCAAA CCTAAGATAC TAATAGCATA ACAGCGTAAT AAACTAGGGT ACTAGATCTA GTATAGCAAA ATAGCAGAGT ACGCAATAGA TACTTCAGAC GGGCGGGATG GTACATCACT AGATCTAACG GGGAAATAAG GTCCTGGCTA GAGTATAGAT CAAGTCCTGA GTAACGGGTA AGATCTATAG ATTACATTTA TATGAGAACA GGAGCTATCA TAGATCCACG CTCGATACCA AGCTATAATG CATAGCTTGA GTAAATCTAT AGTAGACACC TAAATAGCTA GCAGTAATAC TATTCATAAC TATTTCCCTT GTTAAAATCA TCCCAACAAC CCTCCAATCA TAACAAAAAA AACACACATA ACTACTCACT AATTATCAAC ACAAAAAACC ATCAAACCTA ACTTA // ID R25_0_0000347 standard; DNA; UNC; 698 BP. XX AC R25_0_0000347 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000347 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x012c12.f1; XX FH Key Location/Qualifiers FH FT source 1..698 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000347_A FT misc_binding 114..148 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000347_1" FT /note="Base quality score is 8.5629e-02" FT misc_binding 148..181 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000347_2" FT /note="Base quality score is 5.0496e-02" FT misc_binding 181..214 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000347_3" FT /note="Base quality score is 6.5687e-02" FT misc_binding 214..247 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000347_4" FT /note="Base quality score is 4.8010e-02" FT misc_binding 247..281 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000347_5" FT /note="Base quality score is 8.2869e-02" FT misc_binding 281..314 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000347_6" FT /note="Base quality score is 7.1106e-02" FT misc_binding 314..347 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000347_7" FT /note="Base quality score is 7.1111e-02" FT misc_binding 347..382 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000347_8" FT /note="Base quality score is 1.3434e-01" FT misc_binding 382..415 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000347_9" FT /note="Base quality score is 1.2441e-01" XX SQ Sequence 698 BP; 214 A; 168 C; 158 G; 158 T; 0 other; ATGTATAGTA TTCACTATAG GGCGAATTGG GCCCTCTAGA TACATCACGA GCGGCCGACA GTGTAGATAG GATATCTAGC AGAATTCCAG CACACTGGCG GCGTTACTAG TGGATCTATG TGATAGTAGA CCAGTAATTT GAAGTAGATC TAGTCCAATG TCCTCCCCGC GATCCAATAG ATCTAAAGCG TAGCAGTCGT CAAGGGGGCC TAGATCTACC ATAACCCGTG ATGCTCAGGA GAATAGATCT AAACAACAAG CATGACGTAC GCTGCGCTAG ATCTACTGAC AATAATCTAT GCTGGGGCGT AAGATCTAAC AGCAACGCTC CGTATACCTA CACTAGATCT ATACAGAGTT CCGGCTGTCT CGTTTCATAA GATCTAGGCA ACAAGTGTCA GCCGAGGTAA TTAGATACTA GCCCCCGCCC CGATATACTT AACGTACACT AAAGACATCA TCGCGCAGGG AACCGTGTAG AACTAGAGCC CACAAGGGTA CATTCTTAGG ATAGATCTAT TGAGCATTAG ACGGGCTTGA TCCCGTTAGC TCATACGCCT TGCCGCGGTA GAATGTGGAG TAAAACTCAT GACGGGGCCA ACCCAGATAA AATTACTAAA AGAAAATCAC CCCACGGGCA CTCTGTGGAC TTTTATTAAC ACAAACGAGG AATTAGTGCA CCCAAGAGCC GCCAACTA // ID R25_0_0000348 standard; DNA; UNC; 749 BP. XX AC R25_0_0000348 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000348 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x012c03.f1; XX FH Key Location/Qualifiers FH FT source 1..749 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000348_A FT misc_binding 117..150 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000348_1" FT /note="Base quality score is 1.0383e-01" FT misc_binding 150..184 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000348_2" FT /note="Base quality score is 8.1989e-02" FT misc_binding 184..217 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000348_3" FT /note="Base quality score is 8.1444e-02" FT misc_binding 217..251 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000348_4" FT /note="Base quality score is 1.5980e-01" XX SQ Sequence 749 BP; 252 A; 195 C; 136 G; 165 T; 1 other; TAATGTCATA GATCTCTATA GGGCGAATAG CGCCCTCTAG ACTACTGTCG AGCGGACGCC AGTATGACTA GGATATACTA GCCGAATTCC AGCACACTGG ACGGCCGTTA CTAGTGCTCT AAGCAAAACA TAGCGTCCGT CATCAGTAGA TCTACCGAGC GTAGACCGTT GTCCGGCAAT TAGATCTAGG TAAGCGGAGC CCCGTCCACC TCTAAGATCT AGGCCACGAG AGCATAGTGA ATTACTTAAG ATCTATAAGA GAGATAGTAG ATAAGTGCCA GACAAGGAGA TCTAAGTACA CGATACAGAG AGCCTCACTA AACTCGATAT AGATTCTTAT CGCGCAAACA TAATCCTTCA TACATACTTC TATTAGAATT CCGGCAGGCT CGGGTAACCC AAAGGCTATT AGACTAGCCA TCAGTCTTAC TGGAGTTACT TACCGTATAA CGGTCGNTCC ACCTCTAAAC AGTAGGCCTA TGGGACAGTA AACTACAAAT CGGTTCCAAT AGGACTTGTT TCGTCCCTTG ATGTTTGACA AACATCACTA CCGCGAGTAT AGACACGCGA CAAAACACAC GAATAGAACC AGGATTCTAA CCTCACAGAA ACACAAACAC ACAAAACAGA TTATCGCAGC AGCAACACCT CTACATCGAC AATACTTATC ACTATCATCA CAAACAACAC TACAATTATA TACACGCGCT CCATCACACA ACCACATGTC CAACAACACA CATAACATG // ID R25_0_0000349 standard; DNA; UNC; 251 BP. XX AC R25_0_0000349 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000349 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x010b05.f1; XX FH Key Location/Qualifiers FH FT source 1..251 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000349_A XX SQ Sequence 251 BP; 72 A; 53 C; 65 G; 61 T; 0 other; CGGAAACGCA GTGAATTGTA TACGACTCAC TATAGGGCGA ATTGGGCCCT CTAGATGCAT GCTCGAGCGG CGCCAGTGTG ATGGATATCT GCAGAATTCC AGCACACTGG CGGCGTTACT AGTGGATCCG AGCTCGGTAC CAAGCTTGAT GCATAGCTTG AGTATTCTAT AGTCACCTAA ATAGCTTGGC GTAATCATGG TCATAGCTGT TTCCTGTGTG AAAAGGCCAT GACAATGAAA AAACAAAGAA A // ID R25_0_0000350 standard; DNA; UNC; 1049 BP. XX AC R25_0_0000350 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000350 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x010b06.f1; XX FH Key Location/Qualifiers FH FT source 1..1049 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000350_A XX SQ Sequence 1049 BP; 512 A; 293 C; 113 G; 131 T; 0 other; AGCAGTGATT GTAATACGAT CACTATAGGG CGAATTGGGC CCTCTAGATG CATGCTCGAG CGGCGCCAGT GTGATGGATA TCTGCAGAAT TCCAGCACAG GCGGCGTTAC TAGTGGATCC GAGCTCGGTA CCAAGCTTGA TGCATAGCTT GAGTATTCTA TAGTGTCACC TAAATAGCTT GGCGTAATCA TGGTCATAGC TGTTTCCTGT GTGAAAAGCC CACCAGTATA CCAAAAAAAC AACACGCACG AGAAAACAAC CACCAAAATA AACCACACCG ACGCCTGTCC AAGACGGAAA AAGACACATA GAAAGACCCA AACCCAGACG GACACGGCAG GCAGCACACC AATTCGACAA CAATACACAA ACACAAAAGG AGACCACACC ACACACGCCA CCACCACTCA CCGACAGCCA AAACATCACA GCCATCATCA GAACACACAC ACTACAAAAA CACAGACAGC ACCACACCAC AAACACCAAA ACAACCAACA CAACACCACT CCAACAAACA ATACAACAAC AAAAAAACAA ACAAAAAACA AAACAAAAAA CAAAACAAAC AACAAAGAAA CACACACGTA CAAGACTCAA GCAAAAAAAA AATAAACACA ACAATAACAT CACACAGAAA TAAACAGACA AACAACTAAT ATTCACTACT AGAACAACTA AATCATCAAA TCAAAATCCA CATACCAAAT CATAAAATAA TAACATAATC AATATCAATC ACATTAAACA CGAAGACAGA CACATAAATA CACACAAACA AATAGCGAGA AAACACAACA ACACAAACAA CAAAAACACA CAAAAAAACA AACATCATAA TACCACAACA TGCAAAACGC AATCAAAACG ACACATACAC AACTACGATA CACAACGCCA TAACTAAACT TAGAACACAC ACTATAAATA AAAAAAACAA CATCCACACA TGTACAACCC ATAAACAAAC CACATCAGCA AATCCAAAAA AAATACAAAA CAACAACAAC AAAACAAACA AAACAAACCC TACACCACTA AACACACCC // ID R25_0_0000351 standard; DNA; UNC; 401 BP. XX AC R25_0_0000351 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000351 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x010b07.f1; XX FH Key Location/Qualifiers FH FT source 1..401 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000351_A XX SQ Sequence 401 BP; 136 A; 84 C; 109 G; 72 T; 0 other; TCCATTGGAC TAGCGTAGTG TGTATTCCTC ATGATCACTA TGCGACTGGA GGTCAGTAGC GTTTGGTGGA AGGACTCTTA TACGGATAGC GAGACGCGAG TGGAGATGCT AGCCAGTAAC GCGTAAGAGA CACGCTACGA ATGGCCCTAG CCAGCACGCT GAGAATGTCG ATGGAGCTGG ATCTGATGGC ACTAGTCACA TCACGTAAGA AACAGACACG ACTACAACGA CGATTAACAG TAAGAGCTCC TAAGGATAGT ACAGCGACAA GTATATCACA GGACAGAGAG ACAACAGATG AGTGAGATAC ATACCACACT GATATCGAGT ATAGAGCAGA GAGAAAGAAA GAGAACAGAA CAACCTGTAG TCACGACAGC CGATAGGCAC CGAATGCAGA G // ID R25_0_0000352 standard; DNA; UNC; 869 BP. XX AC R25_0_0000352 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000352 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x010b10.f1; XX FH Key Location/Qualifiers FH FT source 1..869 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000352_A FT misc_binding 124..157 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000352_1" FT /note="Base quality score is 2.8002e-03" FT misc_binding 157..190 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000352_2" FT /note="Base quality score is 4.9446e-02" FT misc_binding 190..223 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000352_3" FT /note="Base quality score is 3.8929e-03" FT misc_binding 223..256 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000352_4" FT /note="Base quality score is 1.4979e-02" FT misc_binding 256..289 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000352_5" FT /note="Base quality score is 2.4666e-03" FT misc_binding 289..322 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000352_6" FT /note="Base quality score is 3.5412e-03" FT misc_binding 322..355 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000352_7" FT /note="Base quality score is 5.8089e-03" FT misc_binding 355..388 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000352_8" FT /note="Base quality score is 8.3147e-03" FT misc_binding 388..421 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000352_9" FT /note="Base quality score is 5.2311e-02" FT misc_binding 421..453 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000352_10" FT /note="Base quality score is 4.5550e-02" FT misc_binding 453..486 FT /bound_moiety ="CTF/NF1" FT /label="R25_0_0000352_11" FT /note="Base quality score is 2.9194e-02" XX SQ Sequence 869 BP; 272 A; 195 C; 213 G; 187 T; 2 other; AGCGCAGTGA TTGTAATACG ACTCACTATA GGGCGAATTG GGCCCTCATA GATGCATGCT CGAGCGGCGC CAGTGTGATG GATATCTGCA GAATTCCAGC ACACTGGCGG CCGTTACTAG TGGATCTACC AGCTACAGCA CAATCAATCA ATCTAGATCT ATGCGTTTTA AGGGGCTTGG CTGGAGTAGA TCTAGGGATC TGTACCCATG GGCCCCTATT AGATCTATGT CTTGATACCG CGCTAGGGGG GTTAGATCTA TGATTTGTGC GAACTGTGAT ATCGATAGAT CTAGGCCACA CATTTCGAGT CCTATGCTTA GATCTATCTT GCCGGTTCAA GGGATAACCC CTAGATCTAA TGATCCTCCA ATCCCCTCTG CAGCTAGATC TATGATTTTT TCGGTAGGGC TCGCGCTTAG ATCTAGGTGG ATCGATGGGG AGGGAGTATA AGATCTATGG TAGGGGCGGT GTTGAGGGCG TATAGATCCG AGCTCGGTAC CAAGCTTGAT GCATAGCTTG AGTATTCTAT AGTGTCACCT AAATAGCTTG GCGTAATCCT TGGCCTAGCT TTTTCCTTGG TGAAAATGCA GATTACAAAC AAAAGACACA AGAGACACAA GAAAAAAAGA GGGACTAAAG AGAAGAAGTA GAAGCACACA GTAGCGGAAC GGAACACAAC ACAACGACGA GCTACACGAA CAACAACATA GAGACAACAG CAACACCTAG AAAACGACAA TGTAAAGACA ATAAGGACGA CAAGATAAAG AAGAACGAAC GAGCAACGAC CCAAGACCGA CCTCAGCCTA GCAACCCGAC AGCATACAGG ACTGGAACTA ACAGTCACAA TCGCCCAACC NANCAGAGC // ID R25_0_0000353 standard; DNA; UNC; 961 BP. XX AC R25_0_0000353 XX DT 3-JUN-2005 XX DE 5' Sequence of SELEX/SAGE Clone :R25_0_0000353 of cycle 0 XX KW HTP SELEX/SAGE, invitro transcription factor binding sites XX OS unidentified OC unidentified XX RN [1] RC This Contig sequence is obtained by assembly of forward and reverse RC sequence of the clone R25_0_000001 of SELEX cycle 0. Duplicate Clones RC containing the same set of binding sites are labelled as colony B of the RC same clone. RA Emmanuelle Roulet, Stephane Busso, Anamaria A.Camargo, Andrew J.G Simpson, RA Nicolas Mermod, and Philipp Bucher. RT High-throughput SELEX-SAGE method for quantitative modelling of RT transcription-factor binding sites. RL Nature Biotechnology 20:831-835(2000) XX DR TRACES; x010b12.f1; XX FH Key Location/Qualifiers FH FT source 1..961 FT /mol_type="unassigned DNA" FT /organism="unidentified" FT /tissue_type="SELEX" FT /note=Contig sequence of colony/colonies R25_0_0000353_A FT misc_binding 174..207 FT /bound_m