Gan 2010, histone modifications in S2 and testis cells.

Profiling chromatin modifications using antibodies against 3 histone modifications and RNA Pol II in S2 and bam testis cells.

• Raw data was downloaded from: GEO
• Input file format: BED
• Download date: n/a

From D. melanogaster (Apr 2006 BDGP R5/dm3).

ChIP-seq data:

	Filename	Description	Feature	GEO-ID
1	GSM480156_dm3-S2-H3K4me3.sga	S2 cell, H3K4me3	H3K4me3	GSM480156
2	GSM480157_dm3-S2-H3K27me3.sga	S2 cell, H3K27me3	H3K27me3	GSM480157
3	GSM480158_dm3-S2-H3K36me3.sga	S2 cell, H3K36me3	H3K36me3	GSM480158
4	GSM480159_dm3-S2-PolII.sga	S2 cell, PolII	PolII	GSM480159
5	GSM480446_dm3-bam-H3K4me3.sga	Testis cell, H3K4me3	H3K4me3	GSM480446
6	GSM480447_dm3-bam-H3K27me3.sga	Testis cell, H3K27me3	H3K27me3	GSM480447
7	GSM480448_dm3-bam-H3K36me3.sga	Testis cell, H3K36me3	H3K36me3	GSM480448
8	GSM480449_dm3-bam-PolII.sga	Testis cell, PolII	PolII	GSM480449

BED to SGA conversion was carried out using bed2sga.pl (ChIP-Seq v. 1.5.3).

• Gan Q, Schones DE, Ho Eun S, Wei G, Cui K, Zhao K, Chen X
  Monovalent and unpoised status of most genes in undifferentiated cell-enriched Drosophila testis. Genome Biol. 2010;11(4):R42. doi: 10.1186/gb-2010-11-4-r42. Epub 2010 Apr 15. 20398323
• GEO series GSE19325: Monovalent and unpoised status of most genes in undifferentiated cell-enriched Drosophila testis