Hoskins 2011, Drosophila embryo cap analysis of gene expression (CAGE). LiftOver from dm3.

This series contains only the CAGE data from the paper cited below. The RLM-RACE and cap-trapped ESTs are not included.

• Raw data for dm3 was downloaded from: Publication @ Genome Research
• Input file format: TXT
• Download date: 4-10-2014

From D. melanogaster (Aug 2014 BDGP Rel6 + ISO1 MT/dm6).

Transcription Profiling data:

	Filename	Description	Feature	GEO-ID
1	embryo_cage.sga	Embryo CAGE	TSS	-

This dataset was lifted over from dm3.

• Hoskins RA, Landolin JM, Brown JB, Sandler JE, Takahashi H, Lassmann T, Yu C, Booth BW, Zhang D, Wan KH, Yang L, Boley N, Andrews J, Kaufman TC, Graveley BR, Bickel PJ, Carninci P, Carlson JW, Celniker SE
  Genome-wide analysis of promoter architecture in Drosophila melanogaster. Genome Res. 2011 Feb;21(2):182-92. doi: 10.1101/gr.112466.110. Epub 2010 Dec 22. 21177961