Lo 2011, TFs and H3K56ac in human adipocytes

ChIP-seq against H3K56 acetylation, E2F4, CEBPA (C/EBP alpha, CCAAT/enhancer-binding protein alpha) and HSF-1 in human mesenchymal stem cells-derived adipocytes. IgG is used as control.

• Raw data was downloaded from GEO series: GSE24326
• Input file format: BED

From H. sapiens (March 2006 NCBI36/hg18).

ChIP-seq data:

	Filename	Description	Feature	GEO-ID
1	GSM599836_H3K56ac.sga	Adipocytes|H3K56ac	H3K56ac	GSM599836
2	GSM599837_E2F4.sga	Adipocytes|E2F4	E2F4	GSM599837
3	GSM599838_CEBPa.sga	Adipocytes|CEBPa	CEBPa	GSM599838
4	GSM599839_HSF1.sga	Adipocytes|HSF1	HSF1	GSM599839
5	GSM599840_IgG.sga	Adipocytes|Control	IgG	GSM599840

BED files were converted to SGA using bed2sga.pl (ChIP-Seq v. 1.5.2).

• Lo KA, Bauchmann MK, Baumann AP, Donahue CJ, Thiede MA, Hayes LS, des Etages SA, Fraenkel E
  Genome-wide profiling of H3K56 acetylation and transcription factor binding sites in human adipocytes. PLoS One. 2011;6(6):e19778. doi: 10.1371/journal.pone.0019778. Epub 2011 Jun 2. 21655096
• GEO series GSE24326: Genome-wide profiling of H3K56 acetylation and transcription factor binding sites in human adipocytes