Barski 2007, CD4+ cells, histone marks. LiftOver from hg18.

ChIP-seq against 20 histone lysine and arginine methylations, one histone variant (H2A.Z), RNA polymerase II (Pol II) and the insulator binding protein CTCF in human CD4+ T cells. Chromatin digested with micrococcal nuclease (MNase).
This dataset was lifted over from hg18.

• Raw data was downloaded from: SRA
• Input file format: BED
• Download date: 26-9-2017

From H. sapiens (Feb 2009 GRCh37/hg19).

ChIP-seq data:

	Filename	Description	Feature	GEO-ID
1	CTCF.sga	CD4+ CTCF	CTCF	-
2	H2AZ.sga	CD4+ H2AZ	H2AZ	-
3	H2BK5me1.sga	CD4+ H2BK5me1	H2BK5me1	-
4	H3K27me1.sga	CD4+ H3K27me1	H3K27me1	-
5	H3K27me2.sga	CD4+ H3K27me2	H3K27me2	-
6	H3K27me3.sga	CD4+ H3K27me3	H3K27me3	-
7	H3K36me1.sga	CD4+ H3K36me1	H3K36me1	-
8	H3K36me3.sga	CD4+ H3K36me3	H3K36me3	-
9	H3K4me1.sga	CD4+ H3K4me1	H3K4me1	-
10	H3K4me2.sga	CD4+ H3K4me2	H3K4me2	-
11	H3K4me3.sga	CD4+ H3K4me3	H3K4me3	-
12	H3K79me1.sga	CD4+ H3K79me1	H3K79me1	-
13	H3K79me2.sga	CD4+ H3K79me2	H3K79me2	-
14	H3K79me3.sga	CD4+ H3K79me3	H3K79me3	-
15	H3K9me1.sga	CD4+ H3K9me1	H3K9me1	-
16	H3K9me2.sga	CD4+ H3K9me2	H3K9me2	-
17	H3K9me3.sga	CD4+ H3K9me3	H3K9me3	-
18	H3R2me1.sga	CD4+ H3R2me1	H3R2me1	-
19	H3R2me2.sga	CD4+ H3R2me2	H3R2me2	-
20	H4K20me1.sga	CD4+ H4K20me1	H4K20me1	-
21	H4K20me3.sga	CD4+ H4K20me3	H4K20me3	-
22	H4R3me2.sga	CD4+ H4R3me2	H4R3me2	-
23	PolII.sga	CD4+ PolII	PolII	-

Merged samples:

All samples have been merged except CTCF and PolII to generate the all_histones sample.

Samples were lifted-over from hg18. Data was originally downloaded in BED format from the authors' website.

• Barski A, Cuddapah S, Cui K, Roh TY, Schones DE, Wang Z, Wei G, Chepelev I, Zhao K
  High-resolution profiling of histone methylations in the human genome. Cell. 2007 May 18;129(4):823-37. 17512414