Adult gastrointestinal tract.

Description

This samples serie was produced as part of the RoadMap Project.

Source

Files downloaded from GEO FTP server: ftp://ftp.ncbi.nlm.nih.gov/pub/geo/DATA/roadmapepigenomics/by_sample/
Input file format: BED

Samples

From H. sapiens (Feb 2009 GRCh37/hg19).

ChIP-seq data:

	Filename	Description	Feature	GEO-ID
1	GSM1112808_BI.Adult_Liver.H3K27ac.3.sga	Adult Liver\|H3K27ac\|rep 1	H3K27ac	GSM1112808
2	GSM1112809_BI.Adult_Liver.H3K27ac.4.sga	Adult Liver\|H3K27ac\|rep 2	H3K27ac	GSM1112809
3	GSM1112814_BI.Adult_Liver.H3K27me3.4.sga	Adult Liver\|H3K27me3\|rep 1	H3K27me3	GSM1112814
4	GSM537698_BI.Adult_Liver.H3K27me3.3.sga	Adult Liver\|H3K27me3\|rep 2	H3K27me3	GSM537698
5	GSM537707_BI.Adult_Liver.H3K27me3.5.sga	Adult Liver\|H3K27me3\|rep 3	H3K27me3	GSM537707
6	GSM1059442_UCSD.Adult_Liver.H3K36me3.STL011.sga	Adult Liver\|H3K36me3\|rep 1	H3K36me3	GSM1059442
7	GSM537699_BI.Adult_Liver.H3K36me3.3.sga	Adult Liver\|H3K36me3\|rep 2	H3K36me3	GSM537699
8	GSM537708_BI.Adult_Liver.H3K36me3.5.sga	Adult Liver\|H3K36me3\|rep 3	H3K36me3	GSM537708
9	GSM669931_BI.Adult_Liver.H3K36me3.4.sga	Adult Liver\|H3K36me3\|rep 4	H3K36me3	GSM669931
10	GSM1059451_UCSD.Adult_Liver.H3K4me1.STL011.sga	Adult Liver\|H3K4me1\|rep 1	H3K4me1	GSM1059451
11	GSM537706_BI.Adult_Liver.H3K4me1.3.sga	Adult Liver\|H3K4me1\|rep 2	H3K4me1	GSM537706
12	GSM621654_BI.Adult_Liver.H3K4me1.5.sga	Adult Liver\|H3K4me1\|rep 3	H3K4me1	GSM621654
13	GSM669972_BI.Adult_Liver.H3K4me1.4.sga	Adult Liver\|H3K4me1\|rep 4	H3K4me1	GSM669972
14	GSM537697_BI.Adult_Liver.H3K4me3.3.sga	Adult Liver\|H3K4me3\|rep 1	H3K4me3	GSM537697
15	GSM537709_BI.Adult_Liver.H3K4me3.5.sga	Adult Liver\|H3K4me3\|rep 2	H3K4me3	GSM537709
16	GSM621675_BI.Adult_Liver.H3K4me3.4.sga	Adult Liver\|H3K4me3\|rep 3	H3K4me3	GSM621675
17	GSM537705_BI.Adult_Liver.H3K9ac.3.sga	Adult Liver\|H3K9ac\|rep 1	H3K9ac	GSM537705
18	GSM621630_BI.Adult_Liver.H3K9ac.4.sga	Adult Liver\|H3K9ac\|rep 2	H3K9ac	GSM621630
19	GSM1120361_UCSD.Adult_Liver.H3K9me3.STL011.sga	Adult Liver\|H3K9me3\|rep 1	H3K9me3	GSM1120361
20	GSM537695_BI.Adult_Liver.H3K9me3.3.sga	Adult Liver\|H3K9me3\|rep 2	H3K9me3	GSM537695
21	GSM537710_BI.Adult_Liver.H3K9me3.5.sga	Adult Liver\|H3K9me3\|rep 3	H3K9me3	GSM537710
22	GSM669986_BI.Adult_Liver.H3K9me3.4.sga	Adult Liver\|H3K9me3\|rep 4	H3K9me3	GSM669986
23	GSM1059458_UCSD.Adult_Liver.Input.STL011.sga	Adult Liver\|Input\|rep 1	Input	GSM1059458
24	GSM621629_BI.Adult_Liver.Input.4.sga	Adult Liver\|Input\|rep 2	WCE	GSM621629
25	GSM669910_BI.Adult_Liver.Input.5.sga	Adult Liver\|Input\|rep 3	WCE	GSM669910
26	GSM670008_BI.Adult_Liver.Input.3.sga	Adult Liver\|Input\|rep 4	WCE	GSM670008
27	GSM1112780_BI.Colon_Smooth_Muscle.H3K27ac.156.sga	Colon Smooth Muscle\|H3K27ac	H3K27ac	GSM1112780
28	GSM772974_BI.Colon_Smooth_Muscle.H3K27me3.Donor_83_REMC_18.sga	Colon Smooth Muscle\|H3K27me3\|rep 1	H3K27me3	GSM772974
29	GSM997259_BI.Colon_Smooth_Muscle.H3K27me3.156.sga	Colon Smooth Muscle\|H3K27me3\|rep 2	H3K27me3	GSM997259
30	GSM772975_BI.Colon_Smooth_Muscle.H3K36me3.Donor_83_REMC_18.sga	Colon Smooth Muscle\|H3K36me3\|rep 1	H3K36me3	GSM772975
31	GSM916031_BI.Colon_Smooth_Muscle.H3K36me3.156.sga	Colon Smooth Muscle\|H3K36me3\|rep 2	H3K36me3	GSM916031
32	GSM997276_BI.Colon_Smooth_Muscle.H3K36me3.156.DNA_Lib_1851.sga	Colon Smooth Muscle\|H3K36me3\|rep 3	H3K36me3	GSM997276
33	GSM772972_BI.Colon_Smooth_Muscle.H3K4me1.Donor_83_REMC_18.sga	Colon Smooth Muscle\|H3K4me1	H3K4me1	GSM772972
34	GSM772861_BI.Colon_Smooth_Muscle.H3K4me3.Donor_83_REMC_18.sga	Colon Smooth Muscle\|H3K4me3\|rep 1	H3K4me3	GSM772861
35	GSM916029_BI.Colon_Smooth_Muscle.H3K4me3.156.sga	Colon Smooth Muscle\|H3K4me3\|rep 2	H3K4me3	GSM916029
36	GSM772970_BI.Colon_Smooth_Muscle.H3K9ac.Donor_83_REMC_18.sga	Colon Smooth Muscle\|H3K9ac	H3K9ac	GSM772970
37	GSM772858_BI.Colon_Smooth_Muscle.H3K9me3.Donor_83_REMC_18.sga	Colon Smooth Muscle\|H3K9me3\|rep 1	H3K9me3	GSM772858
38	GSM997277_BI.Colon_Smooth_Muscle.H3K9me3.156.sga	Colon Smooth Muscle\|H3K9me3\|rep 2	H3K9me3	GSM997277
39	GSM772968_BI.Colon_Smooth_Muscle.Input.Donor_83_REMC_18.sga	Colon Smooth Muscle\|Input\|rep 1	WCE	GSM772968
40	GSM916030_BI.Colon_Smooth_Muscle.Input.156.sga	Colon Smooth Muscle\|Input\|rep 2	WCE	GSM916030
41	GSM1112779_BI.Colonic_Mucosa.H3K27ac.155.sga	Colonic Mucosa\|H3K27ac\|rep 1	H3K27ac	GSM1112779
42	GSM1112802_BI.Colonic_Mucosa.H3K27ac.32.sga	Colonic Mucosa\|H3K27ac\|rep 2	H3K27ac	GSM1112802
43	GSM621673_BI.Colonic_Mucosa.H3K27me3.32.sga	Colonic Mucosa\|H3K27me3\|rep 1	H3K27me3	GSM621673
44	GSM916043_BI.Colonic_Mucosa.H3K27me3.155.sga	Colonic Mucosa\|H3K27me3\|rep 2	H3K27me3	GSM916043
45	GSM621672_BI.Colonic_Mucosa.H3K36me3.32.sga	Colonic Mucosa\|H3K36me3\|rep 1	H3K36me3	GSM621672
46	GSM916042_BI.Colonic_Mucosa.H3K36me3.155.sga	Colonic Mucosa\|H3K36me3\|rep 2	H3K36me3	GSM916042
47	GSM621670_BI.Colonic_Mucosa.H3K4me1.32.sga	Colonic Mucosa\|H3K4me1\|rep 1	H3K4me1	GSM621670
48	GSM916046_BI.Colonic_Mucosa.H3K4me1.155.sga	Colonic Mucosa\|H3K4me1\|rep 2	H3K4me1	GSM916046
49	GSM621671_BI.Colonic_Mucosa.H3K4me3.32.sga	Colonic Mucosa\|H3K4me3\|rep 1	H3K4me3	GSM621671
50	GSM916045_BI.Colonic_Mucosa.H3K4me3.155.sga	Colonic Mucosa\|H3K4me3\|rep 2	H3K4me3	GSM916045
51	GSM621674_BI.Colonic_Mucosa.H3K9ac.32.sga	Colonic Mucosa\|H3K9ac\|rep 1	H3K9ac	GSM621674
52	GSM916044_BI.Colonic_Mucosa.H3K9ac.155.sga	Colonic Mucosa\|H3K9ac\|rep 2	H3K9ac	GSM916044
53	GSM621668_BI.Colonic_Mucosa.H3K9me3.32.sga	Colonic Mucosa\|H3K9me3\|rep 1	H3K9me3	GSM621668
54	GSM916048_BI.Colonic_Mucosa.H3K9me3.155.sga	Colonic Mucosa\|H3K9me3\|rep 2	H3K9me3	GSM916048
55	GSM621669_BI.Colonic_Mucosa.Input.32.sga	Colonic Mucosa\|Input\|rep 1	WCE	GSM621669
56	GSM916047_BI.Colonic_Mucosa.Input.155.sga	Colonic Mucosa\|Input\|rep 2	WCE	GSM916047
57	GSM1112790_BI.Duodenum_Mucosa.H3K27ac.159.sga	Duodenum Mucosa\|H3K27ac	H3K27ac	GSM1112790
58	GSM621460_BI.Duodenum_Mucosa.H3K27me3.61.sga	Duodenum Mucosa\|H3K27me3\|rep 1	H3K27me3	GSM621460
59	GSM916016_BI.Duodenum_Mucosa.H3K27me3.159.sga	Duodenum Mucosa\|H3K27me3\|rep 2	H3K27me3	GSM916016
60	GSM621421_BI.Duodenum_Mucosa.H3K36me3.61.sga	Duodenum Mucosa\|H3K36me3\|rep 1	H3K36me3	GSM621421
61	GSM916020_BI.Duodenum_Mucosa.H3K36me3.159.sga	Duodenum Mucosa\|H3K36me3\|rep 2	H3K36me3	GSM916020
62	GSM621403_BI.Duodenum_Mucosa.H3K4me1.61.sga	Duodenum Mucosa\|H3K4me1\|rep 1	H3K4me1	GSM621403
63	GSM916017_BI.Duodenum_Mucosa.H3K4me1.159.sga	Duodenum Mucosa\|H3K4me1\|rep 2	H3K4me1	GSM916017
64	GSM621432_BI.Duodenum_Mucosa.H3K4me3.61.sga	Duodenum Mucosa\|H3K4me3\|rep 1	H3K4me3	GSM621432
65	GSM916019_BI.Duodenum_Mucosa.H3K4me3.159.sga	Duodenum Mucosa\|H3K4me3\|rep 2	H3K4me3	GSM916019
66	GSM621445_BI.Duodenum_Mucosa.H3K9ac.61.sga	Duodenum Mucosa\|H3K9ac\|rep 1	H3K9ac	GSM621445
67	GSM916018_BI.Duodenum_Mucosa.H3K9ac.159.sga	Duodenum Mucosa\|H3K9ac\|rep 2	H3K9ac	GSM916018
68	GSM621395_BI.Duodenum_Mucosa.H3K9me3.61.sga	Duodenum Mucosa\|H3K9me3\|rep 1	H3K9me3	GSM621395
69	GSM772889_BI.Duodenum_Mucosa.H3K9me3.159.sga	Duodenum Mucosa\|H3K9me3\|rep 2	H3K9me3	GSM772889
70	GSM621406_BI.Duodenum_Mucosa.Input.61.sga	Duodenum Mucosa\|Input\|rep 1	WCE	GSM621406
71	GSM772890_BI.Duodenum_Mucosa.Input.159.sga	Duodenum Mucosa\|Input\|rep 2	WCE	GSM772890
72	GSM772908_BI.Duodenum_Smooth_Muscle.H3K27ac.160.sga	Duodenum Smooth Muscle\|H3K27ac	H3K27ac	GSM772908
73	GSM772840_BI.Duodenum_Smooth_Muscle.H3K27me3.160.sga	Duodenum Smooth Muscle\|H3K27me3\|rep 1	H3K27me3	GSM772840
74	GSM916032_BI.Duodenum_Smooth_Muscle.H3K27me3.Donor_174_REMC_28.sga	Duodenum Smooth Muscle\|H3K27me3\|rep 2	H3K27me3	GSM916032
75	GSM772838_BI.Duodenum_Smooth_Muscle.H3K36me3.160.sga	Duodenum Smooth Muscle\|H3K36me3\|rep 1	H3K36me3	GSM772838
76	GSM916036_BI.Duodenum_Smooth_Muscle.H3K36me3.Donor_174_REMC_28.sga	Duodenum Smooth Muscle\|H3K36me3\|rep 2	H3K36me3	GSM916036
77	GSM772837_BI.Duodenum_Smooth_Muscle.H3K4me1.160.sga	Duodenum Smooth Muscle\|H3K4me1\|rep 1	H3K4me1	GSM772837
78	GSM916033_BI.Duodenum_Smooth_Muscle.H3K4me1.Donor_174_REMC_28.sga	Duodenum Smooth Muscle\|H3K4me1\|rep 2	H3K4me1	GSM916033
79	GSM772839_BI.Duodenum_Smooth_Muscle.H3K4me3.160.sga	Duodenum Smooth Muscle\|H3K4me3\|rep 1	H3K4me3	GSM772839
80	GSM916014_BI.Duodenum_Smooth_Muscle.H3K4me3.Donor_174_REMC_28.sga	Duodenum Smooth Muscle\|H3K4me3\|rep 2	H3K4me3	GSM916014
81	GSM1112788_BI.Duodenum_Smooth_Muscle.H3K9me3.Donor_174_REMC_28.sga	Duodenum Smooth Muscle\|H3K9me3\|rep 1	H3K9me3	GSM1112788
82	GSM772909_BI.Duodenum_Smooth_Muscle.H3K9me3.160.sga	Duodenum Smooth Muscle\|H3K9me3\|rep 2	H3K9me3	GSM772909
83	GSM1112789_BI.Duodenum_Smooth_Muscle.Input.Donor_174_REMC_28.sga	Duodenum Smooth Muscle\|Input\|rep 1	Input	GSM1112789
84	GSM772910_BI.Duodenum_Smooth_Muscle.Input.160.sga	Duodenum Smooth Muscle\|Input\|rep 2	WCE	GSM772910
85	GSM1013127_UCSD.Esophagus.H3K27ac.STL002.sga	Esophagus\|H3K27ac\|rep 1	H3K27ac	GSM1013127
86	GSM906393_UCSD.Esophagus.H3K27ac.STL003.sga	Esophagus\|H3K27ac\|rep 2	H3K27ac	GSM906393
87	GSM906399_UCSD.Esophagus.H3K27me3.STL003.sga	Esophagus\|H3K27me3	H3K27me3	GSM906399
88	GSM1120346_UCSD.Esophagus.H3K36me3.STL002.sga	Esophagus\|H3K36me3\|rep 1	H3K36me3	GSM1120346
89	GSM910567_UCSD.Esophagus.H3K36me3.STL003.sga	Esophagus\|H3K36me3\|rep 2	H3K36me3	GSM910567
90	GSM1120349_UCSD.Esophagus.H3K4me1.STL002.sga	Esophagus\|H3K4me1\|rep 1	H3K4me1	GSM1120349
91	GSM910573_UCSD.Esophagus.H3K4me1.STL003.sga	Esophagus\|H3K4me1\|rep 2	H3K4me1	GSM910573
92	GSM910578_UCSD.Esophagus.H3K4me3.STL003.sga	Esophagus\|H3K4me3	H3K4me3	GSM910578
93	GSM1120359_UCSD.Esophagus.H3K9me3.STL002.sga	Esophagus\|H3K9me3\|rep 1	H3K9me3	GSM1120359
94	GSM910584_UCSD.Esophagus.H3K9me3.STL003.sga	Esophagus\|H3K9me3\|rep 2	H3K9me3	GSM910584
95	GSM1120363_UCSD.Esophagus.Input.STL002.sga	Esophagus\|Input\|rep 1	Input	GSM1120363
96	GSM1120364_UCSD.Esophagus.Input.STL002.sga	Esophagus\|Input\|rep 2	Input	GSM1120364
97	GSM906415_UCSD.Esophagus.Input.STL003.sga	Esophagus\|Input\|rep 3	Input	GSM906415
98	GSM1013122_UCSD.Gastric.H3K27ac.STL001.sga	Gastric\|H3K27ac\|rep 1	H3K27ac	GSM1013122
99	GSM1013128_UCSD.Gastric.H3K27ac.STL002.sga	Gastric\|H3K27ac\|rep 2	H3K27ac	GSM1013128
100	GSM910555_UCSD.Gastric.H3K27ac.STL003.sga	Gastric\|H3K27ac\|rep 3	H3K27ac	GSM910555
101	GSM910561_UCSD.Gastric.H3K27me3.STL003.sga	Gastric\|H3K27me3	H3K27me3	GSM910561
102	GSM1127180_UCSD.Gastric.H3K36me3.STL001.sga	Gastric\|H3K36me3\|rep 1	H3K36me3	GSM1127180
103	GSM910568_UCSD.Gastric.H3K36me3.STL003.sga	Gastric\|H3K36me3\|rep 2	H3K36me3	GSM910568
104	GSM1013147_UCSD.Gastric.H3K4me1.STL001.sga	Gastric\|H3K4me1\|rep 1	H3K4me1	GSM1013147
105	GSM910574_UCSD.Gastric.H3K4me1.STL003.sga	Gastric\|H3K4me1\|rep 2	H3K4me1	GSM910574
106	GSM910579_UCSD.Gastric.H3K4me3.STL003.sga	Gastric\|H3K4me3	H3K4me3	GSM910579
107	GSM1013159_UCSD.Gastric.H3K9me3.STL001.sga	Gastric\|H3K9me3\|rep 1	H3K9me3	GSM1013159
108	GSM910585_UCSD.Gastric.H3K9me3.STL003.sga	Gastric\|H3K9me3\|rep 2	H3K9me3	GSM910585
109	GSM1013164_UCSD.Gastric.Input.STL001.sga	Gastric\|Input\|rep 1	Input	GSM1013164
110	GSM1013170_UCSD.Gastric.Input.STL002.sga	Gastric\|Input\|rep 2	Input	GSM1013170
111	GSM956032_UCSD.Gastric.Input.STL003.sga	Gastric\|Input\|rep 3	Input	GSM956032
112	GSM1127061_UCSF-UBC.Pancreatic_Islets.H3K27ac.ZGI_213.sga	Pancreatic Islets\|H3K27ac\|rep 1	H3K27ac	GSM1127061
113	GSM1127071_UCSF-UBC.Pancreatic_Islets.H3K27ac.ZD4_273.sga	Pancreatic Islets\|H3K27ac\|rep 2	H3K27ac	GSM1127071
114	GSM1127074_UCSF-UBC.Pancreatic_Islets.H3K27me3.ZGI_213.sga	Pancreatic Islets\|H3K27me3\|rep 1	H3K27me3	GSM1127074
115	GSM537658_BI.Pancreatic_Islets.H3K27me3.pancreatic_islets_normal_3_27_09.sga	Pancreatic Islets\|H3K27me3\|rep 2	H3K27me3	GSM537658
116	GSM1127069_UCSF-UBC.Pancreatic_Islets.H3K36me3.ZGI_213.sga	Pancreatic Islets\|H3K36me3\|rep 1	H3K36me3	GSM1127069
117	GSM537661_BI.Pancreatic_Islets.H3K36me3.pancreatic_islets_normal_3_27_09.sga	Pancreatic Islets\|H3K36me3\|rep 2	H3K36me3	GSM537661
118	GSM1127087_UCSF-UBC.Pancreatic_Islets.H3K4me1.ZGI_213.sga	Pancreatic Islets\|H3K4me1\|rep 1	H3K4me1	GSM1127087
119	GSM537642_BI.Pancreatic_Islets.H3K4me1.pancreatic_islets_normal_3_27_09.sga	Pancreatic Islets\|H3K4me1\|rep 2	H3K4me1	GSM537642
120	GSM1127067_UCSF-UBC.Pancreatic_Islets.H3K4me3.ZD4_273.sga	Pancreatic Islets\|H3K4me3\|rep 1	H3K4me3	GSM1127067
121	GSM1127082_UCSF-UBC.Pancreatic_Islets.H3K4me3.ZGI_213.sga	Pancreatic Islets\|H3K4me3\|rep 2	H3K4me3	GSM1127082
122	GSM537643_BI.Pancreatic_Islets.H3K4me3.pancreatic_islets_normal_3_27_09.sga	Pancreatic Islets\|H3K4me3\|rep 3	H3K4me3	GSM537643
123	GSM537660_BI.Pancreatic_Islets.H3K9ac.pancreatic_islets_normal_3_27_09.sga	Pancreatic Islets\|H3K9ac	H3K9ac	GSM537660
124	GSM1127086_UCSF-UBC.Pancreatic_Islets.H3K9me3.ZGI_213.sga	Pancreatic Islets\|H3K9me3\|rep 1	H3K9me3	GSM1127086
125	GSM537686_BI.Pancreatic_Islets.H3K9me3.pancreatic_islets_normal_0_0_00.sga	Pancreatic Islets\|H3K9me3\|rep 2	H3K9me3	GSM537686
126	GSM1127092_UCSF-UBC.Pancreatic_Islets.Input.ZGI_213.sga	Pancreatic Islets\|Input\|rep 1	Input	GSM1127092
127	GSM537659_BI.Pancreatic_Islets.Input.pancreatic_islets_normal_3_27_09.sga	Pancreatic Islets\|Input\|rep 2	WCE	GSM537659
128	GSM1112795_BI.Rectal_Mucosa.H3K27ac.29.sga	Rectal Mucosa\|H3K27ac\|rep 1	H3K27ac	GSM1112795
129	GSM1112801_BI.Rectal_Mucosa.H3K27ac.31.sga	Rectal Mucosa\|H3K27ac\|rep 2	H3K27ac	GSM1112801
130	GSM621650_BI.Rectal_Mucosa.H3K27me3.29.sga	Rectal Mucosa\|H3K27me3\|rep 1	H3K27me3	GSM621650
131	GSM621676_BI.Rectal_Mucosa.H3K27me3.31.sga	Rectal Mucosa\|H3K27me3\|rep 2	H3K27me3	GSM621676
132	GSM621646_BI.Rectal_Mucosa.H3K36me3.29.sga	Rectal Mucosa\|H3K36me3\|rep 1	H3K36me3	GSM621646
133	GSM621687_BI.Rectal_Mucosa.H3K36me3.31.sga	Rectal Mucosa\|H3K36me3\|rep 2	H3K36me3	GSM621687
134	GSM621639_BI.Rectal_Mucosa.H3K4me1.29.sga	Rectal Mucosa\|H3K4me1\|rep 1	H3K4me1	GSM621639
135	GSM621659_BI.Rectal_Mucosa.H3K4me1.31.sga	Rectal Mucosa\|H3K4me1\|rep 2	H3K4me1	GSM621659
136	GSM621643_BI.Rectal_Mucosa.H3K4me3.29.sga	Rectal Mucosa\|H3K4me3\|rep 1	H3K4me3	GSM621643
137	GSM621658_BI.Rectal_Mucosa.H3K4me3.31.sga	Rectal Mucosa\|H3K4me3\|rep 2	H3K4me3	GSM621658
138	GSM621636_BI.Rectal_Mucosa.H3K9ac.29.sga	Rectal Mucosa\|H3K9ac\|rep 1	H3K9ac	GSM621636
139	GSM669949_BI.Rectal_Mucosa.H3K9ac.31.sga	Rectal Mucosa\|H3K9ac\|rep 2	H3K9ac	GSM669949
140	GSM621633_BI.Rectal_Mucosa.H3K9me3.29.sga	Rectal Mucosa\|H3K9me3\|rep 1	H3K9me3	GSM621633
141	GSM621678_BI.Rectal_Mucosa.H3K9me3.31.sga	Rectal Mucosa\|H3K9me3\|rep 2	H3K9me3	GSM621678
142	GSM621647_BI.Rectal_Mucosa.Input.29.sga	Rectal Mucosa\|Input\|rep 1	WCE	GSM621647
143	GSM621677_BI.Rectal_Mucosa.Input.31.sga	Rectal Mucosa\|Input\|rep 2	WCE	GSM621677
144	GSM1112796_BI.Rectal_Smooth_Muscle.H3K27ac.30.sga	Rectal Smooth Muscle\|H3K27ac	H3K27ac	GSM1112796
145	GSM621655_BI.Rectal_Smooth_Muscle.H3K27me3.30.sga	Rectal Smooth Muscle\|H3K27me3	H3K27me3	GSM621655
146	GSM621656_BI.Rectal_Smooth_Muscle.H3K36me3.30.sga	Rectal Smooth Muscle\|H3K36me3	H3K36me3	GSM621656
147	GSM669964_BI.Rectal_Smooth_Muscle.H3K4me1.30.sga	Rectal Smooth Muscle\|H3K4me1	H3K4me1	GSM669964
148	GSM621662_BI.Rectal_Smooth_Muscle.H3K4me3.30.sga	Rectal Smooth Muscle\|H3K4me3	H3K4me3	GSM621662
149	GSM621661_BI.Rectal_Smooth_Muscle.H3K9ac.30.sga	Rectal Smooth Muscle\|H3K9ac	H3K9ac	GSM621661
150	GSM621660_BI.Rectal_Smooth_Muscle.H3K9me3.30.sga	Rectal Smooth Muscle\|H3K9me3	H3K9me3	GSM621660
151	GSM621657_BI.Rectal_Smooth_Muscle.Input.30.sga	Rectal Smooth Muscle\|Input	WCE	GSM621657
152	GSM910559_UCSD.Sigmoid_Colon.H3K27ac.STL003.sga	Sigmoid Colon\|H3K27ac\|rep 1	H3K27ac	GSM910559
153	GSM915331_UCSD.Sigmoid_Colon.H3K27ac.STL001.sga	Sigmoid Colon\|H3K27ac\|rep 2	H3K27ac	GSM915331
154	GSM910564_UCSD.Sigmoid_Colon.H3K27me3.STL003.sga	Sigmoid Colon\|H3K27me3\|rep 1	H3K27me3	GSM910564
155	GSM915333_UCSD.Sigmoid_Colon.H3K27me3.STL001.sga	Sigmoid Colon\|H3K27me3\|rep 2	H3K27me3	GSM915333
156	GSM956013_UCSD.Sigmoid_Colon.H3K36me3.STL001.sga	Sigmoid Colon\|H3K36me3\|rep 1	H3K36me3	GSM956013
157	GSM956016_UCSD.Sigmoid_Colon.H3K36me3.STL003.sga	Sigmoid Colon\|H3K36me3\|rep 2	H3K36me3	GSM956016
158	GSM956020_UCSD.Sigmoid_Colon.H3K4me1.STL001.sga	Sigmoid Colon\|H3K4me1\|rep 1	H3K4me1	GSM956020
159	GSM956023_UCSD.Sigmoid_Colon.H3K4me1.STL003.sga	Sigmoid Colon\|H3K4me1\|rep 2	H3K4me1	GSM956023
160	GSM956024_UCSD.Sigmoid_Colon.H3K4me3.STL001.sga	Sigmoid Colon\|H3K4me3	H3K4me3	GSM956024
161	GSM1120358_UCSD.Sigmoid_Colon.H3K9me3.STL001.sga	Sigmoid Colon\|H3K9me3\|rep 1	H3K9me3	GSM1120358
162	GSM956027_UCSD.Sigmoid_Colon.H3K9me3.STL003.sga	Sigmoid Colon\|H3K9me3\|rep 2	H3K9me3	GSM956027
163	GSM1059456_UCSD.Sigmoid_Colon.Input.STL001.sga	Sigmoid Colon\|Input\|rep 1	Input	GSM1059456
164	GSM1120362_UCSD.Sigmoid_Colon.Input.STL001.sga	Sigmoid Colon\|Input\|rep 2	Input	GSM1120362
165	GSM906422_UCSD.Sigmoid_Colon.Input.STL003.sga	Sigmoid Colon\|Input\|rep 3	Input	GSM906422
166	GSM1013131_UCSD.Small_Intestine.H3K27ac.STL002.sga	Small Intestine\|H3K27ac\|rep 1	H3K27ac	GSM1013131
167	GSM1127172_UCSD.Small_Intestine.H3K27ac.STL003.sga	Small Intestine\|H3K27ac\|rep 2	H3K27ac	GSM1127172
168	GSM915330_UCSD.Small_Intestine.H3K27ac.STL001.sga	Small Intestine\|H3K27ac\|rep 3	H3K27ac	GSM915330
169	GSM915332_UCSD.Small_Intestine.H3K27me3.STL001.sga	Small Intestine\|H3K27me3	H3K27me3	GSM915332
170	GSM1120347_UCSD.Small_Intestine.H3K36me3.STL002.sga	Small Intestine\|H3K36me3\|rep 1	H3K36me3	GSM1120347
171	GSM910565_UCSD.Small_Intestine.H3K36me3.STL001.sga	Small Intestine\|H3K36me3\|rep 2	H3K36me3	GSM910565
172	GSM1120350_UCSD.Small_Intestine.H3K4me1.STL002.sga	Small Intestine\|H3K4me1\|rep 1	H3K4me1	GSM1120350
173	GSM956019_UCSD.Small_Intestine.H3K4me1.STL001.sga	Small Intestine\|H3K4me1\|rep 2	H3K4me1	GSM956019
174	GSM906407_UCSD.Small_Intestine.H3K4me3.STL003.sga	Small Intestine\|H3K4me3	H3K4me3	GSM906407
175	GSM1013160_UCSD.Small_Intestine.H3K9me3.STL001.sga	Small Intestine\|H3K9me3\|rep 1	H3K9me3	GSM1013160
176	GSM1120360_UCSD.Small_Intestine.H3K9me3.STL002.sga	Small Intestine\|H3K9me3\|rep 2	H3K9me3	GSM1120360
177	GSM1120365_UCSD.Small_Intestine.Input.STL002.sga	Small Intestine\|Input\|rep 1	Input	GSM1120365
178	GSM915337_UCSD.Small_Intestine.Input.STL001.sga	Small Intestine\|Input\|rep 2	Input	GSM915337
179	GSM772969_BI.Stomach_Mucosa.H3K27me3.157.sga	Stomach Mucosa\|H3K27me3	H3K27me3	GSM772969
180	GSM772936_BI.Stomach_Mucosa.H3K36me3.157.sga	Stomach Mucosa\|H3K36me3	H3K36me3	GSM772936
181	GSM772907_BI.Stomach_Mucosa.H3K4me1.157.sga	Stomach Mucosa\|H3K4me1	H3K4me1	GSM772907
182	GSM772942_BI.Stomach_Mucosa.H3K4me3.157.sga	Stomach Mucosa\|H3K4me3	H3K4me3	GSM772942
183	GSM772941_BI.Stomach_Mucosa.H3K9ac.157.sga	Stomach Mucosa\|H3K9ac	H3K9ac	GSM772941
184	GSM772940_BI.Stomach_Mucosa.H3K9me3.157.sga	Stomach Mucosa\|H3K9me3	H3K9me3	GSM772940
185	GSM772939_BI.Stomach_Mucosa.Input.157.sga	Stomach Mucosa\|Input	WCE	GSM772939
186	GSM916065_BI.Stomach_Smooth_Muscle.H3K27ac.28.sga	Stomach Smooth Muscle\|H3K27ac	H3K27ac	GSM916065
187	GSM1112783_BI.Stomach_Smooth_Muscle.H3K27me3.161.sga	Stomach Smooth Muscle\|H3K27me3\|rep 1	H3K27me3	GSM1112783
188	GSM621635_BI.Stomach_Smooth_Muscle.H3K27me3.28.sga	Stomach Smooth Muscle\|H3K27me3\|rep 2	H3K27me3	GSM621635
189	GSM621649_BI.Stomach_Smooth_Muscle.H3K36me3.28.sga	Stomach Smooth Muscle\|H3K36me3\|rep 1	H3K36me3	GSM621649
190	GSM772891_BI.Stomach_Smooth_Muscle.H3K36me3.161.sga	Stomach Smooth Muscle\|H3K36me3\|rep 2	H3K36me3	GSM772891
191	GSM621642_BI.Stomach_Smooth_Muscle.H3K4me1.28.sga	Stomach Smooth Muscle\|H3K4me1	H3K4me1	GSM621642
192	GSM621645_BI.Stomach_Smooth_Muscle.H3K4me3.28.sga	Stomach Smooth Muscle\|H3K4me3\|rep 1	H3K4me3	GSM621645
193	GSM772887_BI.Stomach_Smooth_Muscle.H3K4me3.161.sga	Stomach Smooth Muscle\|H3K4me3\|rep 2	H3K4me3	GSM772887
194	GSM669921_BI.Stomach_Smooth_Muscle.H3K9ac.28.sga	Stomach Smooth Muscle\|H3K9ac\|rep 1	H3K9ac	GSM669921
195	GSM772886_BI.Stomach_Smooth_Muscle.H3K9ac.161.sga	Stomach Smooth Muscle\|H3K9ac\|rep 2	H3K9ac	GSM772886
196	GSM621631_BI.Stomach_Smooth_Muscle.H3K9me3.28.sga	Stomach Smooth Muscle\|H3K9me3\|rep 1	H3K9me3	GSM621631
197	GSM772888_BI.Stomach_Smooth_Muscle.H3K9me3.161.sga	Stomach Smooth Muscle\|H3K9me3\|rep 2	H3K9me3	GSM772888
198	GSM621652_BI.Stomach_Smooth_Muscle.Input.28.sga	Stomach Smooth Muscle\|Input\|rep 1	WCE	GSM621652
199	GSM772883_BI.Stomach_Smooth_Muscle.Input.161.sga	Stomach Smooth Muscle\|Input\|rep 2	WCE	GSM772883

DNase FAIRE data:

	Filename	Description	Feature	GEO-ID
1	GSM1027320_UW.Gastric.ChromatinAccessibility.STL001.DNase.DS20260.sga	Gastric\|DNase-seq\|rep 1	DNase-seq	GSM1027320
2	GSM1027325_UW.Gastric.ChromatinAccessibility.STL003.DNase.DS20748.sga	Gastric\|DNase-seq\|rep 2	DNase-seq	GSM1027325
3	GSM1027327_UW.Small_Intestine.ChromatinAccessibility.STL003.DNase.DS20770.sga	Small Intestine\|DNase-seq	DNase-seq	GSM1027327

Technical Notes

BED files were downloaded from the FTP and converted in SGA format using bed2sga (ChIP-seq).

References