Adult urinary system.

Description

This samples serie was produced as part of the RoadMap Project.

Source

Files downloaded from GEO FTP server: ftp://ftp.ncbi.nlm.nih.gov/pub/geo/DATA/roadmapepigenomics/by_sample/
Input file format: BED

Samples

From H. sapiens (Feb 2009 GRCh37/hg19).

ChIP-seq data:

	Filename	Description	Feature	GEO-ID
1	GSM1112799_BI.Adult_Kidney.H3K27ac.153.sga	Adult Kidney\|H3K27ac\|rep 1	H3K27ac	GSM1112799
2	GSM1112806_BI.Adult_Kidney.H3K27ac.27.sga	Adult Kidney\|H3K27ac\|rep 2	H3K27ac	GSM1112806
3	GSM621634_BI.Adult_Kidney.H3K36me3.27.sga	Adult Kidney\|H3K36me3\|rep 1	H3K36me3	GSM621634
4	GSM773000_BI.Adult_Kidney.H3K36me3.153.sga	Adult Kidney\|H3K36me3\|rep 2	H3K36me3	GSM773000
5	GSM670025_BI.Adult_Kidney.H3K4me1.27.sga	Adult Kidney\|H3K4me1\|rep 1	H3K4me1	GSM670025
6	GSM773001_BI.Adult_Kidney.H3K4me1.153.sga	Adult Kidney\|H3K4me1\|rep 2	H3K4me1	GSM773001
7	GSM621648_BI.Adult_Kidney.H3K4me3.27.sga	Adult Kidney\|H3K4me3\|rep 1	H3K4me3	GSM621648
8	GSM773005_BI.Adult_Kidney.H3K4me3.153.sga	Adult Kidney\|H3K4me3\|rep 2	H3K4me3	GSM773005
9	GSM772811_BI.Adult_Kidney.H3K9ac.27.sga	Adult Kidney\|H3K9ac\|rep 1	H3K9ac	GSM772811
10	GSM773006_BI.Adult_Kidney.H3K9ac.153.sga	Adult Kidney\|H3K9ac\|rep 2	H3K9ac	GSM773006
11	GSM621651_BI.Adult_Kidney.H3K9me3.27.sga	Adult Kidney\|H3K9me3\|rep 1	H3K9me3	GSM621651
12	GSM773026_BI.Adult_Kidney.H3K9me3.153.sga	Adult Kidney\|H3K9me3\|rep 2	H3K9me3	GSM773026
13	GSM621638_BI.Adult_Kidney.Input.27.sga	Adult Kidney\|Input\|rep 1	WCE	GSM621638
14	GSM773025_BI.Adult_Kidney.Input.153.sga	Adult Kidney\|Input\|rep 2	WCE	GSM773025
15	GSM1013133_UCSD.Bladder.H3K27ac.STL003.sga	Bladder\|H3K27ac	H3K27ac	GSM1013133
16	GSM1059441_UCSD.Bladder.H3K36me3.STL003.sga	Bladder\|H3K36me3	H3K36me3	GSM1059441
17	GSM1059450_UCSD.Bladder.H3K4me1.STL003.sga	Bladder\|H3K4me1	H3K4me1	GSM1059450
18	GSM1059457_UCSD.Bladder.Input.STL003.CY49.sga	Bladder\|Input\|rep 1	Input	GSM1059457
19	GSM906414_UCSD.Bladder.Input.STL003.sga	Bladder\|Input\|rep 2	Input	GSM906414

Technical Notes

BED files were downloaded from the FTP and converted in SGA format using bed2sga (ChIP-seq).

References