Stromal and connective tissues.

Description

This samples serie was produced as part of the RoadMap Project.

Source

Files downloaded from GEO FTP server: ftp://ftp.ncbi.nlm.nih.gov/pub/geo/DATA/roadmapepigenomics/by_sample/
Input file format: BED

Samples

From H. sapiens (Feb 2009 GRCh37/hg19).

ChIP-seq data:

	Filename	Description	Feature	GEO-ID
1	GSM1112792_BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27ac.57.sga	Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|H3K27ac\|rep 1	H3K27ac	GSM1112792
2	GSM1112793_BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27ac.58.sga	Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|H3K27ac\|rep 2	H3K27ac	GSM1112793
3	GSM1112797_BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27ac.59.sga	Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|H3K27ac\|rep 3	H3K27ac	GSM1112797
4	GSM1112798_BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27ac.60.sga	Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|H3K27ac\|rep 4	H3K27ac	GSM1112798
5	GSM621454_BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27me3.57.sga	Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|H3K27me3\|rep 1	H3K27me3	GSM621454
6	GSM669957_BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27me3.60.sga	Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|H3K27me3\|rep 2	H3K27me3	GSM669957
7	GSM670007_BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27me3.59.sga	Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|H3K27me3\|rep 3	H3K27me3	GSM670007
8	GSM670009_BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27me3.58.sga	Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|H3K27me3\|rep 4	H3K27me3	GSM670009
9	GSM621419_BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K36me3.57.sga	Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|H3K36me3\|rep 1	H3K36me3	GSM621419
10	GSM669951_BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K36me3.60.sga	Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|H3K36me3\|rep 2	H3K36me3	GSM669951
11	GSM669996_BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K36me3.59.sga	Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|H3K36me3\|rep 3	H3K36me3	GSM669996
12	GSM670037_BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K36me3.58.sga	Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|H3K36me3\|rep 4	H3K36me3	GSM670037
13	GSM621402_BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me1.57.sga	Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|H3K4me1\|rep 1	H3K4me1	GSM621402
14	GSM669911_BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me1.58.sga	Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|H3K4me1\|rep 2	H3K4me1	GSM669911
15	GSM669920_BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me1.59.sga	Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|H3K4me1\|rep 3	H3K4me1	GSM669920
16	GSM669980_BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me1.60.sga	Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|H3K4me1\|rep 4	H3K4me1	GSM669980
17	GSM621422_BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me3.57.sga	Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|H3K4me3\|rep 1	H3K4me3	GSM621422
18	GSM669924_BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me3.58.sga	Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|H3K4me3\|rep 2	H3K4me3	GSM669924
19	GSM669991_BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me3.59.sga	Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|H3K4me3\|rep 3	H3K4me3	GSM669991
20	GSM670019_BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K4me3.60.sga	Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|H3K4me3\|rep 4	H3K4me3	GSM670019
21	GSM621442_BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K9ac.57.sga	Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|H3K9ac\|rep 1	H3K9ac	GSM621442
22	GSM669937_BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K9ac.58.sga	Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|H3K9ac\|rep 2	H3K9ac	GSM669937
23	GSM669983_BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K9ac.60.sga	Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|H3K9ac\|rep 3	H3K9ac	GSM669983
24	GSM669999_BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K9ac.59.sga	Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|H3K9ac\|rep 4	H3K9ac	GSM669999
25	GSM621426_BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K9me3.57.sga	Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|H3K9me3\|rep 1	H3K9me3	GSM621426
26	GSM669989_BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K9me3.59.sga	Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|H3K9me3\|rep 2	H3K9me3	GSM669989
27	GSM670018_BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K9me3.58.sga	Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|H3K9me3\|rep 3	H3K9me3	GSM670018
28	GSM670028_BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K9me3.60.sga	Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|H3K9me3\|rep 4	H3K9me3	GSM670028
29	GSM669946_BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.Input.57.sga	Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|Input\|rep 1	WCE	GSM669946
30	GSM669958_BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.Input.58.sga	Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|Input\|rep 2	WCE	GSM669958
31	GSM669987_BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.Input.59.sga	Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|Input\|rep 3	WCE	GSM669987
32	GSM670006_BI.Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.Input.60.sga	Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|Input\|rep 4	WCE	GSM670006
33	GSM1127064_UCSF-UBC.Breast_Fibroblast_Primary_Cells.H3K27ac.RM071.sga	Breast Fibroblast Primary Cells\|H3K27ac	H3K27ac	GSM1127064
34	GSM1127134_UCSF-UBC.Breast_Fibroblast_Primary_Cells.H3K27me3.RM071.sga	Breast Fibroblast Primary Cells\|H3K27me3	H3K27me3	GSM1127134
35	GSM1127068_UCSF-UBC.Breast_Fibroblast_Primary_Cells.H3K36me3.RM071.sga	Breast Fibroblast Primary Cells\|H3K36me3	H3K36me3	GSM1127068
36	GSM1127065_UCSF-UBC.Breast_Fibroblast_Primary_Cells.H3K4me1.RM071.sga	Breast Fibroblast Primary Cells\|H3K4me1	H3K4me1	GSM1127065
37	GSM1127085_UCSF-UBC.Breast_Fibroblast_Primary_Cells.H3K4me3.RM071.sga	Breast Fibroblast Primary Cells\|H3K4me3	H3K4me3	GSM1127085
38	GSM1112786_BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27ac.60.sga	Chondrocytes from Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|H3K27ac\|rep 1	H3K27ac	GSM1112786
39	GSM1112787_BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27ac.59.sga	Chondrocytes from Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|H3K27ac\|rep 2	H3K27ac	GSM1112787
40	GSM1112794_BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.H3K27ac.58.sga	Chondrocytes from Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|H3K27ac\|rep 3	H3K27ac	GSM1112794
41	GSM1112777_BI.Chondrocytes_from_Bone_Marrow_Derived_Mesenchymal_Stem_Cell_Cultured_Cells.Input.57.sga	Chondrocytes from Bone Marrow Derived Mesenchymal Stem Cell Cultured Cells\|Input	Input	GSM1112777
42	GSM1127060_UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K27ac.skin02.sga	Penis Foreskin Fibroblast Primary Cells\|H3K27ac\|rep 1	H3K27ac	GSM1127060
43	GSM1127076_UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K27ac.skin01.sga	Penis Foreskin Fibroblast Primary Cells\|H3K27ac\|rep 2	H3K27ac	GSM1127076
44	GSM958163_UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K27ac.skin03.sga	Penis Foreskin Fibroblast Primary Cells\|H3K27ac\|rep 3	H3K27ac	GSM958163
45	GSM817237_UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K27me3.skin01.sga	Penis Foreskin Fibroblast Primary Cells\|H3K27me3\|rep 1	H3K27me3	GSM817237
46	GSM817240_UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K27me3.skin02.sga	Penis Foreskin Fibroblast Primary Cells\|H3K27me3\|rep 2	H3K27me3	GSM817240
47	GSM958154_UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K27me3.skin03.sga	Penis Foreskin Fibroblast Primary Cells\|H3K27me3\|rep 3	H3K27me3	GSM958154
48	GSM817238_UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K36me3.skin01.sga	Penis Foreskin Fibroblast Primary Cells\|H3K36me3\|rep 1	H3K36me3	GSM817238
49	GSM817241_UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K36me3.skin02.sga	Penis Foreskin Fibroblast Primary Cells\|H3K36me3\|rep 2	H3K36me3	GSM817241
50	GSM958149_UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K36me3.skin03.sga	Penis Foreskin Fibroblast Primary Cells\|H3K36me3\|rep 3	H3K36me3	GSM958149
51	GSM817234_UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K4me1.skin01.sga	Penis Foreskin Fibroblast Primary Cells\|H3K4me1\|rep 1	H3K4me1	GSM817234
52	GSM941717_UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K4me1.skin02.sga	Penis Foreskin Fibroblast Primary Cells\|H3K4me1\|rep 2	H3K4me1	GSM941717
53	GSM958164_UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K4me1.skin03.sga	Penis Foreskin Fibroblast Primary Cells\|H3K4me1\|rep 3	H3K4me1	GSM958164
54	GSM817235_UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K4me3.skin01.sga	Penis Foreskin Fibroblast Primary Cells\|H3K4me3\|rep 1	H3K4me3	GSM817235
55	GSM941718_UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K4me3.skin02.sga	Penis Foreskin Fibroblast Primary Cells\|H3K4me3\|rep 2	H3K4me3	GSM941718
56	GSM958158_UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K4me3.skin03.sga	Penis Foreskin Fibroblast Primary Cells\|H3K4me3\|rep 3	H3K4me3	GSM958158
57	GSM817236_UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K9me3.skin01.sga	Penis Foreskin Fibroblast Primary Cells\|H3K9me3\|rep 1	H3K9me3	GSM817236
58	GSM817239_UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.H3K9me3.skin02.sga	Penis Foreskin Fibroblast Primary Cells\|H3K9me3\|rep 2	H3K9me3	GSM817239
59	GSM817246_UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.Input.skin01.sga	Penis Foreskin Fibroblast Primary Cells\|Input\|rep 1	Input	GSM817246
60	GSM817247_UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.Input.skin02.sga	Penis Foreskin Fibroblast Primary Cells\|Input\|rep 2	Input	GSM817247
61	GSM958168_UCSF-UBC.Penis_Foreskin_Fibroblast_Primary_Cells.Input.skin03.sga	Penis Foreskin Fibroblast Primary Cells\|Input\|rep 3	Input	GSM958168
62	GSM1127077_UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K27ac.skin03.sga	Penis Foreskin Keratinocyte Primary Cells\|H3K27ac\|rep 1	H3K27ac	GSM1127077
63	GSM958156_UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K27ac.skin03.sga	Penis Foreskin Keratinocyte Primary Cells\|H3K27ac\|rep 2	H3K27ac	GSM958156
64	GSM669592_UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K27me3.skin01.sga	Penis Foreskin Keratinocyte Primary Cells\|H3K27me3\|rep 1	H3K27me3	GSM669592
65	GSM817229_UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K27me3.skin01.A05937.sga	Penis Foreskin Keratinocyte Primary Cells\|H3K27me3\|rep 2	H3K27me3	GSM817229
66	GSM941738_UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K27me3.skin02.sga	Penis Foreskin Keratinocyte Primary Cells\|H3K27me3\|rep 3	H3K27me3	GSM941738
67	GSM958162_UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K27me3.skin03.sga	Penis Foreskin Keratinocyte Primary Cells\|H3K27me3\|rep 4	H3K27me3	GSM958162
68	GSM817225_UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K36me3.skin01.sga	Penis Foreskin Keratinocyte Primary Cells\|H3K36me3\|rep 1	H3K36me3	GSM817225
69	GSM941739_UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K36me3.skin02.sga	Penis Foreskin Keratinocyte Primary Cells\|H3K36me3\|rep 2	H3K36me3	GSM941739
70	GSM958159_UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K36me3.skin03.sga	Penis Foreskin Keratinocyte Primary Cells\|H3K36me3\|rep 3	H3K36me3	GSM958159
71	GSM669591_UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K4me1.skin01.sga	Penis Foreskin Keratinocyte Primary Cells\|H3K4me1\|rep 1	H3K4me1	GSM669591
72	GSM941736_UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K4me1.skin02.sga	Penis Foreskin Keratinocyte Primary Cells\|H3K4me1\|rep 2	H3K4me1	GSM941736
73	GSM958161_UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K4me1.skin03.sga	Penis Foreskin Keratinocyte Primary Cells\|H3K4me1\|rep 3	H3K4me1	GSM958161
74	GSM669589_UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K4me3.skin01.sga	Penis Foreskin Keratinocyte Primary Cells\|H3K4me3\|rep 1	H3K4me3	GSM669589
75	GSM941735_UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K4me3.skin02.sga	Penis Foreskin Keratinocyte Primary Cells\|H3K4me3\|rep 2	H3K4me3	GSM941735
76	GSM958155_UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K4me3.skin03.sga	Penis Foreskin Keratinocyte Primary Cells\|H3K4me3\|rep 3	H3K4me3	GSM958155
77	GSM669590_UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K9ac.skin01.sga	Penis Foreskin Keratinocyte Primary Cells\|H3K9ac	H3K9ac	GSM669590
78	GSM941737_UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K9me3.skin02.sga	Penis Foreskin Keratinocyte Primary Cells\|H3K9me3\|rep 1	H3K9me3	GSM941737
79	GSM958153_UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.H3K9me3.skin03.sga	Penis Foreskin Keratinocyte Primary Cells\|H3K9me3\|rep 2	H3K9me3	GSM958153
80	GSM817242_UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.Input.skin01.sga	Penis Foreskin Keratinocyte Primary Cells\|Input\|rep 1	Input	GSM817242
81	GSM941742_UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.Input.skin02.sga	Penis Foreskin Keratinocyte Primary Cells\|Input\|rep 2	Input	GSM941742
82	GSM958167_UCSF-UBC.Penis_Foreskin_Keratinocyte_Primary_Cells.Input.skin03.sga	Penis Foreskin Keratinocyte Primary Cells\|Input\|rep 3	Input	GSM958167
83	GSM1127072_UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K27ac.skin01.sga	Penis Foreskin Melanocyte Primary Cells\|H3K27ac\|rep 1	H3K27ac	GSM1127072
84	GSM1127073_UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K27ac.skin03.sga	Penis Foreskin Melanocyte Primary Cells\|H3K27ac\|rep 2	H3K27ac	GSM1127073
85	GSM958157_UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K27ac.skin03.sga	Penis Foreskin Melanocyte Primary Cells\|H3K27ac\|rep 3	H3K27ac	GSM958157
86	GSM941721_UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K27me3.skin01.sga	Penis Foreskin Melanocyte Primary Cells\|H3K27me3\|rep 1	H3K27me3	GSM941721
87	GSM941733_UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K27me3.skin02.sga	Penis Foreskin Melanocyte Primary Cells\|H3K27me3\|rep 2	H3K27me3	GSM941733
88	GSM958150_UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K27me3.skin03.sga	Penis Foreskin Melanocyte Primary Cells\|H3K27me3\|rep 3	H3K27me3	GSM958150
89	GSM941729_UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K36me3.skin01.sga	Penis Foreskin Melanocyte Primary Cells\|H3K36me3\|rep 1	H3K36me3	GSM941729
90	GSM941734_UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K36me3.skin02.sga	Penis Foreskin Melanocyte Primary Cells\|H3K36me3\|rep 2	H3K36me3	GSM941734
91	GSM958160_UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K36me3.skin03.sga	Penis Foreskin Melanocyte Primary Cells\|H3K36me3\|rep 3	H3K36me3	GSM958160
92	GSM941728_UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K4me1.skin01.sga	Penis Foreskin Melanocyte Primary Cells\|H3K4me1\|rep 1	H3K4me1	GSM941728
93	GSM941730_UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K4me1.skin02.sga	Penis Foreskin Melanocyte Primary Cells\|H3K4me1\|rep 2	H3K4me1	GSM941730
94	GSM958152_UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K4me1.skin03.sga	Penis Foreskin Melanocyte Primary Cells\|H3K4me1\|rep 3	H3K4me1	GSM958152
95	GSM941719_UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K4me3.skin01.sga	Penis Foreskin Melanocyte Primary Cells\|H3K4me3\|rep 1	H3K4me3	GSM941719
96	GSM941731_UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K4me3.skin02.sga	Penis Foreskin Melanocyte Primary Cells\|H3K4me3\|rep 2	H3K4me3	GSM941731
97	GSM958151_UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K4me3.skin03.sga	Penis Foreskin Melanocyte Primary Cells\|H3K4me3\|rep 3	H3K4me3	GSM958151
98	GSM941720_UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K9me3.skin01.sga	Penis Foreskin Melanocyte Primary Cells\|H3K9me3\|rep 1	H3K9me3	GSM941720
99	GSM941732_UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K9me3.skin02.sga	Penis Foreskin Melanocyte Primary Cells\|H3K9me3\|rep 2	H3K9me3	GSM941732
100	GSM958165_UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.H3K9me3.skin03.sga	Penis Foreskin Melanocyte Primary Cells\|H3K9me3\|rep 3	H3K9me3	GSM958165
101	GSM941740_UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.Input.skin01.sga	Penis Foreskin Melanocyte Primary Cells\|Input\|rep 1	Input	GSM941740
102	GSM941741_UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.Input.skin02.sga	Penis Foreskin Melanocyte Primary Cells\|Input\|rep 2	Input	GSM941741
103	GSM958166_UCSF-UBC.Penis_Foreskin_Melanocyte_Primary_Cells.Input.skin03.sga	Penis Foreskin Melanocyte Primary Cells\|Input\|rep 3	Input	GSM958166

DNase FAIRE data:

	Filename	Description	Feature	GEO-ID
1	GSM909312_UW.Penis_Foreskin_Fibroblast_Primary_Cells.Digital_Genomic_Footprinting.skin01.DGF.DS18224.sga	Penis Foreskin Fibroblast Primary Cells\|DNase-HS	DNase-HS	GSM909312
2	GSM774240_UW.Penis_Foreskin_Fibroblast_Primary_Cells.ChromatinAccessibility.skin01.DS18224.sga	Penis Foreskin Fibroblast Primary Cells\|DNase-seq\|rep 1	DNase-seq	GSM774240
3	GSM774241_UW.Penis_Foreskin_Fibroblast_Primary_Cells.ChromatinAccessibility.skin01.DS18229.sga	Penis Foreskin Fibroblast Primary Cells\|DNase-seq\|rep 2	DNase-seq	GSM774241
4	GSM817169_UW.Penis_Foreskin_Fibroblast_Primary_Cells.ChromatinAccessibility.skin02.DS18252.sga	Penis Foreskin Fibroblast Primary Cells\|DNase-seq\|rep 3	DNase-seq	GSM817169
5	GSM817170_UW.Penis_Foreskin_Fibroblast_Primary_Cells.ChromatinAccessibility.skin02.DS18256.sga	Penis Foreskin Fibroblast Primary Cells\|DNase-seq\|rep 4	DNase-seq	GSM817170
6	GSM1027350_UW.Penis_Foreskin_Keratinocyte_Primary_Cells.Digital_Genomic_Footprinting.skin01.DGF.DS18692.sga	Penis Foreskin Keratinocyte Primary Cells\|DNase-HS	DNase-HS	GSM1027350
7	GSM817194_UW.Penis_Foreskin_Keratinocyte_Primary_Cells.ChromatinAccessibility.skin01.DS18692.sga	Penis Foreskin Keratinocyte Primary Cells\|DNase-seq\|rep 1	DNase-seq	GSM817194
8	GSM817195_UW.Penis_Foreskin_Keratinocyte_Primary_Cells.ChromatinAccessibility.skin01.DS18695.sga	Penis Foreskin Keratinocyte Primary Cells\|DNase-seq\|rep 2	DNase-seq	GSM817195
9	GSM817196_UW.Penis_Foreskin_Keratinocyte_Primary_Cells.ChromatinAccessibility.skin02.DS18714.sga	Penis Foreskin Keratinocyte Primary Cells\|DNase-seq\|rep 3	DNase-seq	GSM817196
10	GSM817197_UW.Penis_Foreskin_Keratinocyte_Primary_Cells.ChromatinAccessibility.skin02.DS18718.sga	Penis Foreskin Keratinocyte Primary Cells\|DNase-seq\|rep 4	DNase-seq	GSM817197
11	GSM1024610_UW.Penis_Foreskin_Melanocyte_Primary_Cells.Digital_Genomic_Footprinting.skin01.DGF.DS18590.sga	Penis Foreskin Melanocyte Primary Cells\|DNase-HS	DNase-HS	GSM1024610
12	GSM1027307_UW.Penis_Foreskin_Melanocyte_Primary_Cells.ChromatinAccessibility.skin02.DNase.DS18668.sga	Penis Foreskin Melanocyte Primary Cells\|DNase-seq\|rep 1	DNase-seq	GSM1027307
13	GSM1027312_UW.Penis_Foreskin_Melanocyte_Primary_Cells.ChromatinAccessibility.skin02.DNase.DS19662.sga	Penis Foreskin Melanocyte Primary Cells\|DNase-seq\|rep 2	DNase-seq	GSM1027312
14	GSM774243_UW.Penis_Foreskin_Melanocyte_Primary_Cells.ChromatinAccessibility.skin01.DS18590.sga	Penis Foreskin Melanocyte Primary Cells\|DNase-seq\|rep 3	DNase-seq	GSM774243
15	GSM774244_UW.Penis_Foreskin_Melanocyte_Primary_Cells.ChromatinAccessibility.skin01.DS18601.sga	Penis Foreskin Melanocyte Primary Cells\|DNase-seq\|rep 4	DNase-seq	GSM774244

Technical Notes

BED files were downloaded from the FTP and converted in SGA format using bed2sga (ChIP-seq).

References