Sikora 2014, ChIP-seq of ER in Invasive Lobular Carcinoma.


Breast cancer cell line MDA-MB-134 was subject to ChIP-seq for the Estrogen Receptor protein (ER). Four samples were used: Estrogen-treated (in the form of 17β-Estradiol) cells followed by ER (ER-α) IP, estrogen treated cells followed by IgG (rabbit origin) IP, EtOH treated cells followed by ER IP and Input (MCF7 genomic DNA). Note that the data for this serie was automatically lifted over from hg18.



From H. sapiens (Feb 2009 GRCh37/hg19).

ChIP-seq data:

Filename Description Feature GEO-ID
1 GSM1235008.sga MDA-MB-134|ER|Estrogen| E-ER GSM1235008
2 GSM1235010.sga MDA-MB-134|ER|EtOH| V-ER GSM1235010
3 GSM1235009.sga MDA-MB-134|IgG|Estrogen| E-IgG GSM1235009
4 GSM1235011.sga MDA-MB-134|Input|None| Input GSM1235011

Technical Notes

Serie lifted over form the corresponding serie mapped on hg18 assembly.


Last update: 1 Oct 2018