ChIP-seq data:
| Filename | Description | Feature | GEO-ID | |
| 1 | GSM881048_Ahr_0-min.sga | Ahr 0-min post LPS stimulation | Ahr | GSM881048 |
| 2 | GSM881050_Ahr_30-min.sga | Ahr 30-min post LPS stimulation | Ahr | GSM881050 |
| 3 | GSM881051_Ahr_60-min.sga | Ahr 60-min post LPS stimulation | Ahr | GSM881051 |
| 4 | GSM881049_Ahr_120-min.sga | Ahr 120-min post LPS stimulation | Ahr | GSM881049 |
| 5 | GSM881126_Atf3_0-min.sga | Atf3 0-min post LPS stimulation | Atf3 | GSM881126 |
| 6 | GSM881128_Atf3_30-min.sga | Atf3 30-min post LPS stimulation | Atf3 | GSM881128 |
| 7 | GSM881129_Atf3_60-min.sga | Atf3 60-min post LPS stimulation | Atf3 | GSM881129 |
| 8 | GSM881127_Atf3_120-min.sga | Atf3 120-min post LPS stimulation | Atf3 | GSM881127 |
| 9 | GSM881130_Atf4_120-min.sga | Atf4 120-min post LPS stimulation | Atf4 | GSM881130 |
| 10 | GSM881135_Cebpb_0-min.sga | Cebpb 0-min post LPS stimulation | Cebpb | GSM881135 |
| 11 | GSM881137_Cebpb_30-min.sga | Cebpb 30-min post LPS stimulation | Cebpb | GSM881137 |
| 12 | GSM881138_Cebpb_60-min.sga | Cebpb 60-min post LPS stimulation | Cebpb | GSM881138 |
| 13 | GSM881136_Cebpb_120-min.sga | Cebpb 120-min post LPS stimulation | Cebpb | GSM881136 |
| 14 | GSM881052_Ctcf_0-min.sga | Ctcf 0-min post LPS stimulation | Ctcf | GSM881052 |
| 15 | GSM881054_Ctcf_30-min.sga | Ctcf 30-min post LPS stimulation | Ctcf | GSM881054 |
| 16 | GSM881055_Ctcf_60-min.sga | Ctcf 60-min post LPS stimulation | Ctcf | GSM881055 |
| 17 | GSM881053_Ctcf_120-min.sga | Ctcf 120-min post LPS stimulation | Ctcf | GSM881053 |
| 18 | GSM881056_E2f1_0-min.sga | E2f1 0-min post LPS stimulation | E2f1 | GSM881056 |
| 19 | GSM881058_E2f1_30-min.sga | E2f1 30-min post LPS stimulation | E2f1 | GSM881058 |
| 20 | GSM881059_E2f1_60-min.sga | E2f1 60-min post LPS stimulation | E2f1 | GSM881059 |
| 21 | GSM881057_E2f1_120-min.sga | E2f1 120-min post LPS stimulation | E2f1 | GSM881057 |
| 22 | GSM881060_E2f4_0-min.sga | E2f4 0-min post LPS stimulation | E2f4 | GSM881060 |
| 23 | GSM881062_E2f4_30-min.sga | E2f4 30-min post LPS stimulation | E2f4 | GSM881062 |
| 24 | GSM881063_E2f4_60-min.sga | E2f4 60-min post LPS stimulation | E2f4 | GSM881063 |
| 25 | GSM881061_E2f4_120-min.sga | E2f4 120-min post LPS stimulation | E2f4 | GSM881061 |
| 26 | GSM881139_Egr1_0-min.sga | Egr1 0-min post LPS stimulation | Egr1 | GSM881139 |
| 27 | GSM881141_Egr1_30-min.sga | Egr1 30-min post LPS stimulation | Egr1 | GSM881141 |
| 28 | GSM881142_Egr1_60-min.sga | Egr1 60-min post LPS stimulation | Egr1 | GSM881142 |
| 29 | GSM881140_Egr1_120-min.sga | Egr1 120-min post LPS stimulation | Egr1 | GSM881140 |
| 30 | GSM881091_Egr2_0-min.sga | Egr2 0-min post LPS stimulation | Egr2 | GSM881091 |
| 31 | GSM881093_Egr2_30-min.sga | Egr2 30-min post LPS stimulation | Egr2 | GSM881093 |
| 32 | GSM881094_Egr2_60-min.sga | Egr2 60-min post LPS stimulation | Egr2 | GSM881094 |
| 33 | GSM881092_Egr2_120-min.sga | Egr2 120-min post LPS stimulation | Egr2 | GSM881092 |
| 34 | GSM881064_Ets2_0-min.sga | Ets2 0-min post LPS stimulation | Ets2 | GSM881064 |
| 35 | GSM881066_Ets2_30-min.sga | Ets2 30-min post LPS stimulation | Ets2 | GSM881066 |
| 36 | GSM881067_Ets2_60-min.sga | Ets2 60-min post LPS stimulation | Ets2 | GSM881067 |
| 37 | GSM881065_Ets2_120-min.sga | Ets2 120-min post LPS stimulation | Ets2 | GSM881065 |
| 38 | GSM881068_Hif1a_0-min.sga | Hif1a 0-min post LPS stimulation | Hif1a | GSM881068 |
| 39 | GSM881070_Hif1a_30-min.sga | Hif1a 30-min post LPS stimulation | Hif1a | GSM881070 |
| 40 | GSM881071_Hif1a_60-min.sga | Hif1a 60-min post LPS stimulation | Hif1a | GSM881071 |
| 41 | GSM881069_Hif1a_120-min.sga | Hif1a 120-min post LPS stimulation | Hif1a | GSM881069 |
| 42 | GSM881072_Irf1_0-min.sga | Irf1 0-min post LPS stimulation | Irf1 | GSM881072 |
| 43 | GSM881074_Irf1_30-min.sga | Irf1 30-min post LPS stimulation | Irf1 | GSM881074 |
| 44 | GSM881075_Irf1_60-min.sga | Irf1 60-min post LPS stimulation | Irf1 | GSM881075 |
| 45 | GSM881073_Irf1_120-min.sga | Irf1 120-min post LPS stimulation | Irf1 | GSM881073 |
| 46 | GSM881143_Irf2_0-min.sga | Irf2 0-min post LPS stimulation | Irf2 | GSM881143 |
| 47 | GSM881145_Irf2_30-min.sga | Irf2 30-min post LPS stimulation | Irf2 | GSM881145 |
| 48 | GSM881146_Irf2_60-min.sga | Irf2 60-min post LPS stimulation | Irf2 | GSM881146 |
| 49 | GSM881144_Irf2_120-min.sga | Irf2 120-min post LPS stimulation | Irf2 | GSM881144 |
| 50 | GSM881147_Irf4_0-min.sga | Irf4 0-min post LPS stimulation | Irf4 | GSM881147 |
| 51 | GSM881149_Irf4_30-min.sga | Irf4 30-min post LPS stimulation | Irf4 | GSM881149 |
| 52 | GSM881150_Irf4_60-min.sga | Irf4 60-min post LPS stimulation | Irf4 | GSM881150 |
| 53 | GSM881148_Irf4_120-min.sga | Irf4 120-min post LPS stimulation | Irf4 | GSM881148 |
| 54 | GSM881076_Junb_0-min.sga | Junb 0-min post LPS stimulation | Junb | GSM881076 |
| 55 | GSM881078_Junb_30-min.sga | Junb 30-min post LPS stimulation | Junb | GSM881078 |
| 56 | GSM881079_Junb_60-min.sga | Junb 60-min post LPS stimulation | Junb | GSM881079 |
| 57 | GSM881077_Junb_120-min.sga | Junb 120-min post LPS stimulation | Junb | GSM881077 |
| 58 | GSM881080_K27Ac_0-min.sga | K27Ac 0-min post LPS stimulation | K27Ac | GSM881080 |
| 59 | GSM881082_K27Ac_30-min.sga | K27Ac 30-min post LPS stimulation | K27Ac | GSM881082 |
| 60 | GSM881083_K27Ac_60-min.sga | K27Ac 60-min post LPS stimulation | K27Ac | GSM881083 |
| 61 | GSM881081_K27Ac_120-min.sga | K27Ac 120-min post LPS stimulation | K27Ac | GSM881081 |
| 62 | GSM881084_K4me1_0-min.sga | K4me1 0-min post LPS stimulation | K4me1 | GSM881084 |
| 63 | GSM881085_K4me1_120-min.sga | K4me1 120-min post LPS stimulation | K4me1 | GSM881085 |
| 64 | GSM881086_K4me1_240-min.sga | K4me1 240-min post LPS stimulation | K4me1 | GSM881086 |
| 65 | GSM881087_K4me3_0-min.sga | K4me3 0-min post LPS stimulation | K4me3 | GSM881087 |
| 66 | GSM881089_K4me3_30-min.sga | K4me3 30-min post LPS stimulation | K4me3 | GSM881089 |
| 67 | GSM881090_K4me3_60-min.sga | K4me3 60-min post LPS stimulation | K4me3 | GSM881090 |
| 68 | GSM881088_K4me3_120-min.sga | K4me3 120-min post LPS stimulation | K4me3 | GSM881088 |
| 69 | GSM881095_Maff_0-min.sga | Maff 0-min post LPS stimulation | Maff | GSM881095 |
| 70 | GSM881097_Maff_30-min.sga | Maff 30-min post LPS stimulation | Maff | GSM881097 |
| 71 | GSM881098_Maff_60-min.sga | Maff 60-min post LPS stimulation | Maff | GSM881098 |
| 72 | GSM881096_Maff_120-min.sga | Maff 120-min post LPS stimulation | Maff | GSM881096 |
| 73 | GSM881151_Nfkb1_0-min.sga | Nfkb1 0-min post LPS stimulation | Nfkb1 | GSM881151 |
| 74 | GSM881153_Nfkb1_30-min.sga | Nfkb1 30-min post LPS stimulation | Nfkb1 | GSM881153 |
| 75 | GSM881154_Nfkb1_60-min.sga | Nfkb1 60-min post LPS stimulation | Nfkb1 | GSM881154 |
| 76 | GSM881152_Nfkb1_120-min.sga | Nfkb1 120-min post LPS stimulation | Nfkb1 | GSM881152 |
| 77 | GSM881099_PU1_0-min.sga | PU1 0-min post LPS stimulation | PU1 | GSM881099 |
| 78 | GSM881101_PU1_30-min.sga | PU1 30-min post LPS stimulation | PU1 | GSM881101 |
| 79 | GSM881102_PU1_60-min.sga | PU1 60-min post LPS stimulation | PU1 | GSM881102 |
| 80 | GSM881100_PU1_120-min.sga | PU1 120-min post LPS stimulation | PU1 | GSM881100 |
| 81 | GSM881103_Pol-II_0-min.sga | Pol-II 0-min post LPS stimulation | Pol-II | GSM881103 |
| 82 | GSM881104_Pol-II_15-min.sga | Pol-II 15-min post LPS stimulation | Pol-II | GSM881104 |
| 83 | GSM881105_Pol-II_30-min.sga | Pol-II 30-min post LPS stimulation | Pol-II | GSM881105 |
| 84 | GSM881106_Pol-II_60-min.sga | Pol-II 60-min post LPS stimulation | Pol-II | GSM881106 |
| 85 | GSM881131_Rel_0-min.sga | Rel 0-min post LPS stimulation | Rel | GSM881131 |
| 86 | GSM881133_Rel_30-min.sga | Rel 30-min post LPS stimulation | Rel | GSM881133 |
| 87 | GSM881134_Rel_60-min.sga | Rel 60-min post LPS stimulation | Rel | GSM881134 |
| 88 | GSM881132_Rel_120-min.sga | Rel 120-min post LPS stimulation | Rel | GSM881132 |
| 89 | GSM881163_Rel_120-min.sga | Rel 120-min post LPS stimulation | Rel | GSM881163 |
| 90 | GSM881111_Rela_0-min.sga | Rela 0-min post LPS stimulation | Rela | GSM881111 |
| 91 | GSM881113_Rela_30-min.sga | Rela 30-min post LPS stimulation | Rela | GSM881113 |
| 92 | GSM881114_Rela_60-min.sga | Rela 60-min post LPS stimulation | Rela | GSM881114 |
| 93 | GSM881112_Rela_120-min.sga | Rela 120-min post LPS stimulation | Rela | GSM881112 |
| 94 | GSM881107_Relb_0-min.sga | Relb 0-min post LPS stimulation | Relb | GSM881107 |
| 95 | GSM881109_Relb_30-min.sga | Relb 30-min post LPS stimulation | Relb | GSM881109 |
| 96 | GSM881110_Relb_60-min.sga | Relb 60-min post LPS stimulation | Relb | GSM881110 |
| 97 | GSM881108_Relb_120-min.sga | Relb 120-min post LPS stimulation | Relb | GSM881108 |
| 98 | GSM881164_Relb_120-min.sga | Relb 120-min post LPS stimulation | Relb | GSM881164 |
| 99 | GSM881115_Runx1_0-min.sga | Runx1 0-min post LPS stimulation | Runx1 | GSM881115 |
| 100 | GSM881117_Runx1_60-min.sga | Runx1 60-min post LPS stimulation | Runx1 | GSM881117 |
| 101 | GSM881116_Runx1_120-min.sga | Runx1 120-min post LPS stimulation | Runx1 | GSM881116 |
| 102 | GSM881155_Stat1_0-min.sga | Stat1 0-min post LPS stimulation | Stat1 | GSM881155 |
| 103 | GSM881157_Stat1_30-min.sga | Stat1 30-min post LPS stimulation | Stat1 | GSM881157 |
| 104 | GSM881158_Stat1_60-min.sga | Stat1 60-min post LPS stimulation | Stat1 | GSM881158 |
| 105 | GSM881156_Stat1_120-min.sga | Stat1 120-min post LPS stimulation | Stat1 | GSM881156 |
| 106 | GSM881159_Stat2_0-min.sga | Stat2 0-min post LPS stimulation | Stat2 | GSM881159 |
| 107 | GSM881161_Stat2_30-min.sga | Stat2 30-min post LPS stimulation | Stat2 | GSM881161 |
| 108 | GSM881162_Stat2_60-min.sga | Stat2 60-min post LPS stimulation | Stat2 | GSM881162 |
| 109 | GSM881160_Stat2_120-min.sga | Stat2 120-min post LPS stimulation | Stat2 | GSM881160 |
| 110 | GSM881118_Stat3_0-min.sga | Stat3 0-min post LPS stimulation | Stat3 | GSM881118 |
| 111 | GSM881120_Stat3_30-min.sga | Stat3 30-min post LPS stimulation | Stat3 | GSM881120 |
| 112 | GSM881121_Stat3_60-min.sga | Stat3 60-min post LPS stimulation | Stat3 | GSM881121 |
| 113 | GSM881119_Stat3_120-min.sga | Stat3 120-min post LPS stimulation | Stat3 | GSM881119 |
| 114 | GSM881122_WCE_0-min.sga | WCE 0-min post LPS stimulation | WCE | GSM881122 |
| 115 | GSM881124_WCE_30-min.sga | WCE 30-min post LPS stimulation | WCE | GSM881124 |
| 116 | GSM881125_WCE_60-min.sga | WCE 60-min post LPS stimulation | WCE | GSM881125 |
| 117 | GSM881123_WCE_120-min.sga | WCE 120-min post LPS stimulation | WCE | GSM881123 |
FASTQ files were extracted from SRA files using fastq-dump (SRA toolkit v2.5.0) and mapped to the genome using Bowtie v0.12.8. SAM files were then converted into bam using samtools v0.1.14 and to bed using bamToBed v2.12.0 (bedtools). SGA conversion was carried out using bed2sga.pl (ChIP-Seq v. 1.5.3).