| NCBI Assembly | https://www.ncbi.nlm.nih.gov/assembly/GCF_000002195.4/ |
| NCBI Version | Amel_4.5 |
| Source | Assembled chromosomes from RefSeq (GCF_000002195.4): https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/195/GCF_000002195.4_Amel_4.5/ |
| UCSC Assembly | none |
| Local Assembly | amel5 |
| Bowtie Idx | a_mellifera_amel5 |
| liftOver | none |
| RepeatMasker | none |
| MGA FTP | https://epd.expasy.org/ftp/mga/amel5/ |
| UCSC Genome Browser | https://genome-euro.ucsc.edu/cgi-bin/hgTracks?hubUrl=https://epd.expasy.org/epd/ucsc/epdHub/epdHub.txt&genome=amel5 |
| Assembly support status | full |
A. thaliana (Feb 2011 TAIR10/araTha1)
| NCBI Assembly | https://www.ncbi.nlm.nih.gov/assembly/GCF_000001735.3/ |
| NCBI Version | TAIR10 |
| Source | Assembled chromosomes from RefSeq (GCF_000001735.3): https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/001/735/GCF_000001735.3_TAIR10/ |
| UCSC Assembly | araTha1 |
| Local Assembly | araTha1 |
| Bowtie Idx | a_thaliana_araTha1 |
| liftOver | none |
| RepeatMasker | rmsk/rmsk_araTha1.SGA.gz |
| MGA FTP | https://epd.expasy.org/ftp/mga/araTha1/ |
| UCSC Genome Browser | https://genome-euro.ucsc.edu/cgi-bin/hgTracks?hubUrl=https://epd.expasy.org/epd/ucsc/epdHub/epdHub.txt&genome=araTha1 |
| Assembly support status | full |
C. familiaris (Sep 2011 CanFam3.1/canFam3)
| NCBI Assembly | https://www.ncbi.nlm.nih.gov/assembly/GCF_000002285.3/ |
| NCBI Version | CanFam3.1 |
| Source | Assembled chromosomes from Refseq (GCF_000002285.3): https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/285/GCF_000002285.3_CanFam3.1/ |
| UCSC Assembly | canFam3 |
| Local Assembly | canFam3 |
| Bowtie Idx | d_rerio_canFam3 |
| liftOver | canFam3ToCanFam2, canFam3ToHg19, canFam3ToHg38, canFam3ToMm10, canFam3ToMm9, canFam3ToRn6, canFam3ToXenTro9, canFam3ToMm39 |
| RepeatMasker | rmsk/rmsk_canFam3.SGA.gz |
| MGA FTP | https://epd.expasy.org/ftp/mga/canFam3/ |
| UCSC Genome Browser | https://genome-euro.ucsc.edu/cgi-bin/hgTracks?hubUrl=https://epd.expasy.org/epd/ucsc/epdHub/epdHub.txt&genome=canFam3 |
| Assembly support status | full |
C. elegans (Oct 2010 WBcel215/ce10)
| NCBI Assembly | https://www.ncbi.nlm.nih.gov/assembly/GCF_000002985.5/ |
| NCBI Version | WBcel215 |
| Source | Assembled chromosomes from Genbank (GCA_000002985.2): https://ftp.ncbi.nlm.nih.gov/genomes/archive/old_genbank/Eukaryotes/invertebrates/Caenorhabditis_elegans/WBcel215/ |
| UCSC Assembly | ce10 |
| Local Assembly | ce10 |
| Bowtie Idx | c_elegans_ce10 |
| liftOver | ce10ToCe4, ce10ToCe6 |
| RepeatMasker | rmsk/rmsk_ce10.SGA.gz |
| MGA FTP | https://epd.expasy.org/ftp/mga/ce10/ |
| UCSC Genome Browser | https://genome.ucsc.edu/cgi-bin/hgTracks?db=ce10 |
| Assembly support status | full |
C. elegans (May 2008 WS190/ce6)
| NCBI Assembly | https://www.ncbi.nlm.nih.gov/assembly/GCF_000002985.1/ |
| NCBI Version | WS190 |
| Source | Assembled chromosomes from RefSeq (GCF_000002985.1_WS190): https://ftp.ncbi.nlm.nih.gov/genomes/refseq/invertebrate/Caenorhabditis_elegans/all_assembly_versions/GCF_000002985.1_WS190/ |
| UCSC Assembly | ce6 |
| Local Assembly | ce6 |
| Bowtie Idx | c_elegans_ce6 |
| liftOver | ce6ToCe4, ce6ToCe10 |
| RepeatMasker | rmsk/rmsk_ce6.SGA.gz |
| MGA FTP | https://epd.expasy.org/ftp/mga/ce6/ |
| UCSC Genome Browser | https://genome-euro.ucsc.edu/cgi-bin/hgTracks?hubUrl=https://epd.expasy.org/epd/ucsc/epdHub/epdHub.txt&genome=ce6 |
| Assembly support status | full |
D. rerio (July 2010 Zv9/danRer7)
| NCBI Assembly | https://www.ncbi.nlm.nih.gov/assembly/GCF_000002035.4/ |
| NCBI Version | Zv9 |
| Source | Assembled chromosomes from Refseq (GCF_000002035.4): https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/035/GCF_000002035.4_Zv9/ |
| UCSC Assembly | danRer7 |
| Local Assembly | danRer7 |
| Bowtie Idx | d_rerio_danRer7 |
| liftOver | danRer7ToHg19, danRer7ToMm9, danRer7ToMm10 |
| RepeatMasker | rmsk/rmsk_danRer7.SGA.gz |
| MGA FTP | https://epd.expasy.org/ftp/mga/danRer7/ |
| UCSC Genome Browser | https://genome-euro.ucsc.edu/cgi-bin/hgTracks?hubUrl=https://epd.expasy.org/epd/ucsc/epdHub/epdHub.txt&genome=danRer7 |
| Assembly support status | full |
D. melanogaster (Apr 2006 BDGP R5/dm3)
| NCBI Assembly | https://www.ncbi.nlm.nih.gov/assembly/GCF_000001215.2/ |
| NCBI Version | Release 5 (R5) |
| Source | Assembled chromosomes from Refseq (RELEASE_5): https://ftp.ncbi.nlm.nih.gov/genomes/archive/old_refseq/Drosophila_melanogaster/RELEASE_5/ |
| UCSC Assembly | dm3 |
| Local Assembly | dm3 |
| Bowtie Idx | d_melanogaster_dm3 |
| liftOver | dm3ToDm6 |
| RepeatMasker | rmsk/rmsk_dm3.SGA.gz |
| MGA FTP | https://epd.expasy.org/ftp/mga/dm3/ |
| UCSC Genome Browser | https://genome.ucsc.edu/cgi-bin/hgTracks?db=dm3 |
| Assembly support status | full |
D. melanogaster (Aug 2014 BDGP Rel6 + ISO1 MT/dm6)
| NCBI Assembly | https://www.ncbi.nlm.nih.gov/assembly/GCF_000001215.4/ |
| NCBI Version | Release 6 plus ISO1 MT |
| Source | Assembled chromosomes from Refseq (GCF_000001215.4): https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/001/215/GCF_000001215.4_Release_6_plus_ISO1_MT |
| UCSC Assembly | dm6 |
| Local Assembly | dm6 |
| Bowtie Idx | d_melanogaster_dm6 |
| liftOver | dm6ToDm3 |
| RepeatMasker | rmsk/rmsk_dm6.SGA.gz |
| MGA FTP | https://epd.expasy.org/ftp/mga/dm6/ |
| UCSC Genome Browser | https://genome-euro.ucsc.edu/cgi-bin/hgTracks?hubUrl=https://epd.expasy.org/epd/ucsc/epdHub/epdHub.txt&genome=dm6 |
| Assembly support status | full |
D. pulex (Sep 2019 PA42 4.1/dpu2)
| NCBI Assembly | https://www.ncbi.nlm.nih.gov/assembly/GCA_900092285.2 |
| NCBI Version | PA42 4.1 |
| Source | Scaffolds from GenBank (GCA_900092285.2) |
| UCSC Assembly | none |
| Local Assembly | dpu2 |
| Bowtie Idx | d_pulex_dpu2 |
| liftOver | none |
| RepeatMasker | none |
| MGA FTP | https://epd.expasy.org/ftp/mga/dpu2/ |
| UCSC Genome Browser | https://genome-euro.ucsc.edu/cgi-bin/hgTracks?hubUrl=https://epd.expasy.org/epd/ucsc/epdHub/epdHub.txt&genome=dpu2 |
| Assembly support status | full |
G. gallus (Dec 2015 Gallus_gallus-5.0/galGal5)
| NCBI Assembly | https://www.ncbi.nlm.nih.gov/assembly/GCF_000002315.4/ |
| NCBI Version | Gallus_gallus-5.0 |
| Source | Assembled chromosomes from RefSeq (GCF_000002315.4): https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/315/GCF_000002315.4_Gallus_gallus-5.0/ |
| UCSC Assembly | galGal5 |
| Local Assembly | galGal5 |
| Bowtie Idx | g_gallus_galGal5 |
| liftOver | galGal5ToDanRer10, galGal5ToHg38, galGal5ToMm10, galGal5ToRn6, galGal5ToXenTro9 |
| RepeatMasker | rmsk/rmsk_galGal5.SGA.gz |
| MGA FTP | https://epd.expasy.org/ftp/mga/galGal5/ |
| UCSC Genome Browser | https://genome-euro.ucsc.edu/cgi-bin/hgTracks?hubUrl=https://epd.expasy.org/epd/ucsc/epdHub/epdHub.txt&genome=galGal5 |
| Assembly support status | full |
H. sapiens (March 2006 NCBI36/hg18)
| NCBI Assembly | https://www.ncbi.nlm.nih.gov/assembly/GCF_000001405.12/ |
| NCBI Version | NCBI36 |
| Source | Assembled chromosomes from RefSeq: ftp://ftp.ncbi.nih.gov/genomes/H_sapiens/ARCHIVE/BUILD.36.2/ |
| UCSC Assembly | hg18 |
| Local Assembly | hg18 |
| Bowtie Idx | h_sapiens_hg18 |
| liftOver | hg18ToHg19, hg18ToHg38, hg18ToMm8, hg18ToMm9, hg18ToBosTau3, hg18ToCanFam2, hg18ToPanTro2 |
| RepeatMasker | rmsk/rmsk_hg18.SGA.gz |
| MGA FTP | https://epd.expasy.org/ftp/mga/hg18/ |
| UCSC Genome Browser | https://genome.ucsc.edu/cgi-bin/hgTracks?db=hg18 |
| Assembly support status | full |
H. sapiens (Feb 2009 GRCh37/hg19)
| NCBI Assembly | https://www.ncbi.nlm.nih.gov/assembly/GCF_000001405.13/ |
| NCBI Version | GRCh37 |
| Source | Assembled chromosomes from RefSeq (GCF_000001405.13): https://ftp.ncbi.nih.gov/genomes/H_sapiens/ARCHIVE/BUILD.37.1/ |
| UCSC Assembly | hg19 |
| Local Assembly | hg19 |
| Bowtie Idx | h_sapiens_hg19 |
| liftOver | hg19ToHg18, hg19ToHg38, hg19ToMm9, hg19ToMm10, hg19ToHg19a, hg19ToCanFam2, hg19ToCanFam3, hg19ToDanRer7, hg19ToDanRer10, hg19ToOviAri3, hg19ToPanTro2, hg19ToRn5, hg19ToRn6, hg19ToSusScr3, hg19ToRheMac8, hg19ToRheMac10 |
| RepeatMasker | rmsk/rmsk_hg19.SGA.gz |
| MGA FTP | https://epd.expasy.org/ftp/mga/hg19/ |
| UCSC Genome Browser | https://genome-euro.ucsc.edu/cgi-bin/hgTracks?hubUrl=https://epd.expasy.org/epd/ucsc/epdHub/epdHub.txt&genome=hg19 |
| Assembly support status | full |
H. sapiens (Feb 2009 Alternate GRCh37/hg19a)
| NCBI Assembly | none |
| NCBI Version | none |
| Source | hg19 alternate assembly |
| UCSC Assembly | none |
| Local Assembly | hg19a |
| Bowtie Idx | h_sapiens_hg19a |
| liftOver | hg19aToHg19 |
| RepeatMasker | none |
| MGA FTP | none |
| UCSC Genome Browser | none |
| Assembly support status | basic |
H. sapiens (Dec 2013 GRCh38/hg38)
| NCBI Assembly | https://www.ncbi.nlm.nih.gov/assembly/GCF_000001405.26/ |
| NCBI Version | GRCh38 |
| Source | Assembled chromosomes from RefSeq (GCF_000001405.26): https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/001/405/GCF_000001405.26_GRCh38/ |
| UCSC Assembly | hg38 |
| Local Assembly | hg38 |
| Bowtie Idx | h_sapiens_hg38 |
| liftOver | hg38ToHg19, hg38ToMm10, hg38ToBosTau8, hg38ToCanFam3, hg38ToDanRer10, hg38ToGalGal5, hg38ToOviAri3, hg38ToPanTro5, hg38ToRn5, hg38ToRn6, hg38ToSusScr3, hg38ToRheMac8, hg38ToMm39 |
| RepeatMasker | rmsk/rmsk_hg38.SGA.gz |
| MGA FTP | none |
| UCSC Genome Browser | https://genome-euro.ucsc.edu/cgi-bin/hgTracks?hubUrl=https://epd.expasy.org/epd/ucsc/epdHub/epdHub.txt&genome=hg38 |
| Assembly support status | full |
H. Sapiens Jan. 2022 T2T-CHM13v2.0/hs1
| NCBI Assembly | https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_009914755.1/ |
| NCBI Version | T2T-CHM13v2.0 |
| Source | https://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Homo_sapiens/latest_assembly_versions/GCF_009914755.1_T2T-CHM13v2.0/ |
| UCSC Assembly | hg38 |
| Local Assembly | hs1 |
| Bowtie Idx | h_sapiens_hs1 |
| liftOver | hs1ToHg19.over.chain.gz, hs1ToHg38.over.chain.gz, hs1ToMm10.over.chain.gz, hs1ToMm39.over.chain.gz |
| RepeatMasker | rmsk/rmsk_hs1.SGA.gz |
| MGA FTP | https://epd.expasy.org/ftp/mga/hs1/ |
| UCSC Genome Browser | https://genome-euro.ucsc.edu/cgi-bin/hgTracks?db=hs1 |
| Assembly support status | full |
M. musculus (March 2012 GRCm38/mm10)
| NCBI Assembly | https://www.ncbi.nlm.nih.gov/assembly/GCF_000001635.20/ |
| NCBI Version | GRCm38 |
| Source | Assembled chromosomes from RefSeq (GCF_000001635.20): https://ftp.ncbi.nlm.nih.gov/genomes/Mus_musculus/ARCHIVE/BUILD.38.1/ |
| UCSC Assembly | mm10 |
| Local Assembly | mm10 |
| Bowtie Idx | m_musculus_mm10 |
| liftOver | mm10ToMm9, mm10ToHg19, mm10ToHg38, mm10ToBosTau8, mm10ToCanFam3, mm10ToGalGal5, mm10ToDanRer10, mm10ToDanRer7, mm10ToOviAri3, mm10ToOreNil2, mm10ToPanTro5, mm10ToRn5, mm10ToRn6, mm10ToSusScr3, mm10ToRheMac8, mm10ToMm39 |
| RepeatMasker | rmsk/rmsk_mm10.SGA.gz |
| MGA FTP | https://epd.expasy.org/ftp/mga/mm10/ |
| UCSC Genome Browser | https://genome-euro.ucsc.edu/cgi-bin/hgTracks?hubUrl=https://epd.expasy.org/epd/ucsc/epdHub/epdHub.txt&genome=mm10 |
| Assembly support status | full |
M. musculus (June 2020 GRCm39/mm39)
| NCBI Assembly | https://www.ncbi.nlm.nih.gov/assembly/GCF_000001635.27/ |
| NCBI Version | GRCm39 |
| Source | https://ftp.ncbi.nlm.nih.gov/genomes/refseq/vertebrate_mammalian/Mus_musculus/reference/GCF_000001635.27_GRCm39/ |
| UCSC Assembly | mm39 |
| Local Assembly | mm39 |
| Bowtie Idx | m_musculus_mm39 |
| liftOver | mm39ToCanFam3, mm39ToCavPor3, mm39ToHg38, mm39ToMm10, mm39ToMm9, mm39ToRheMac10, mm39ToRn6, mm39ToSusScr3, mm39ToXenTro9 |
| RepeatMasker | rmsk/rmsk_mm39.SGA.gz |
| MGA FTP | https://epd.expasy.org/ftp/mga/mm39/ |
| UCSC Genome Browser | https://genome-euro.ucsc.edu/cgi-bin/hgTracks?db=mm39 |
| Assembly support status | full |
M. musculus (July 2007 NCBI37/mm9)
| NCBI Assembly | https://www.ncbi.nlm.nih.gov/assembly/GCF_000001635.18/ |
| NCBI Version | NCBI37 (MGSCv37) |
| Source | Assembled chromosomes from RefSeq (GCF_000001635.18): https://ftp.ncbi.nlm.nih.gov/genomes/Mus_musculus/ARCHIVE/BUILD.37.1/ |
| UCSC Assembly | mm9 |
| Local Assembly | mm9 |
| Bowtie Idx | m_musculus_mm9 |
| liftOver | mm9ToMm8, mm9ToMm10, mm9ToHg18, mm9ToHg19, mm9ToBosTau3, mm9ToCanFam2, mm9ToDanRer7, mm9ToPanTro2, mm9ToRn5, mm9ToMm39 |
| RepeatMasker | rmsk/rmsk_mm9.SGA.gz |
| MGA FTP | https://epd.expasy.org/ftp/mga/mm9/ |
| UCSC Genome Browser | https://genome-euro.ucsc.edu/cgi-bin/hgTracks?hubUrl=https://epd.expasy.org/epd/ucsc/epdHub/epdHub.txt&genome=mm9 |
| Assembly support status | full |
O. aries (Nov 2015 Oar_v4.0/oviAri4)
| NCBI Assembly | https://www.ncbi.nlm.nih.gov/assembly/GCF_000298735.2/ |
| NCBI Version | Oar_v4.1 |
| Source | Assembled chromosomes from GenBank (GCF_000298735.2): https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/298/735/GCA_000298735.2_Oar_v4.0 |
| UCSC Assembly | oviAri4 |
| Local Assembly | oviAri4 |
| Bowtie Idx | o_aries_oviAri4 |
| liftOver | none |
| RepeatMasker | rmsk/rmsk_oviAri4.SGA.gz |
| MGA FTP | https://epd.expasy.org/ftp/mga/oviAri4/ |
| UCSC Genome Browser | https://genome-euro.ucsc.edu/cgi-bin/hgTracks?db=oviAri4 |
| Assembly support status | none |
P. falciparum (Apr 2016 ASM276v2/pfa2)
| NCBI Assembly | https://www.ncbi.nlm.nih.gov/assembly/GCF_000002765.4/ |
| NCBI Version | ASM276v2 |
| Source | Assembled chromosomes from Refseq (GCF_000002765.4) |
| UCSC Assembly | none |
| Local Assembly | pfa2 |
| Bowtie Idx | p_falciparum_pfa2 |
| liftOver | none |
| RepeatMasker | none |
| MGA FTP | https://epd.expasy.org/ftp/mga/pfa2/ |
| UCSC Genome Browser | https://genome-euro.ucsc.edu/cgi-bin/hgTracks?hubUrl=https://epd.expasy.org/epd/ucsc/epdHub/epdHub.txt&genome=pfa2 |
| Assembly support status | full |
M. mulatta (Nov 2015 BCM Mmul_8.0.1/rheMac8)
| NCBI Assembly | https://www.ncbi.nlm.nih.gov/assembly/GCF_000772875.2/ |
| NCBI Version | Mmul_8.0.1 |
| Source | Assembled chromosomes from RefSeq (GCF_000772875.2): https://ftp.ncbi.nlm.nih.gov/genomes/Macaca_mulatta/Assembled_chromosomes |
| UCSC Assembly | rheMac8 |
| Local Assembly | rheMac8 |
| Bowtie Idx | m_mulatta_rheMac8 |
| liftOver | rheMac8ToHg19, rheMac8ToHg38, rheMac8ToMm10, rheMac8ToPanTro5, rheMac8ToRn6 |
| RepeatMasker | rmsk/rmsk_rheMac8.SGA.gz |
| MGA FTP | https://epd.expasy.org/ftp/mga/rheMac8/ |
| UCSC Genome Browser | https://genome-euro.ucsc.edu/cgi-bin/hgTracks?hubUrl=https://epd.expasy.org/epd/ucsc/epdHub/epdHub.txt&genome=rheMac8 |
| Assembly support status | full |
R. norvegicus (Jul 2014 Rnor_6.0/rn6)
| NCBI Assembly | https://www.ncbi.nlm.nih.gov/assembly/GCA_000001895.4/ |
| NCBI Version | Rnor_6.0 |
| Source | Assembled chromosomes from RefSeq (GCF_000001895.4): https://ftp.ncbi.nlm.nih.gov/genomes/R_norvegicus/ARCHIVE/BUILD.5.1 |
| UCSC Assembly | rn6 |
| Local Assembly | rn6 |
| Bowtie Idx | r_norvegicus_rn6 |
| liftOver | rn6ToRn5, rn6ToHg19, rn6ToHg38, rn6ToMm10, rn6ToBosTau8, rn6ToCanFam3, rn6ToPanTro5, rn6ToDanRer10, rn6ToGalGal5, rn6ToRheMac8, rn6ToMm39 |
| RepeatMasker | rmsk/rmsk_rn6.SGA.gz |
| MGA FTP | https://epd.expasy.org/ftp/mga/rn6/ |
| UCSC Genome Browser | https://genome-euro.ucsc.edu/cgi-bin/hgTracks?hubUrl=https://epd.expasy.org/epd/ucsc/epdHub/epdHub.txt&genome=rn6 |
| Assembly support status | full |
S. cerevisiae (Apr 2011 R64/sacCer3)
| NCBI Assembly | https://www.ncbi.nlm.nih.gov/assembly/GCF_000146045.2/ |
| NCBI Version | R64 |
| Source | Assembled chromosomes from RefSeq (GCF_000146045.2): https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/146/045/GCF_000146045.2_R64/ |
| UCSC Assembly | sacCer3 |
| Local Assembly | sacCer3 |
| Bowtie Idx | s_cerevisiae_sacCer3 |
| liftOver | sacCer3ToSacCer2 |
| RepeatMasker | rmsk/rmsk_sacCer3.SGA.gz |
| MGA FTP | https://epd.expasy.org/ftp/mga/sacCer3 |
| UCSC Genome Browser | https://genome-euro.ucsc.edu/cgi-bin/hgTracks?hubUrl=https://epd.expasy.org/epd/ucsc/epdHub/epdHub.txt&genome=sacCer3 |
| Assembly support status | full |
S. pombe (Aug 2015 ASM294v2/spo2)
| NCBI Assembly | https://www.ncbi.nlm.nih.gov/assembly/GCF_000002945.1/ |
| NCBI Version | ASM294v2 |
| Source | Assembled chromosomes from RefSeq (GCF_000002945.1): https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/002/945/GCF_000002945.1_ASM294v2/ |
| UCSC Assembly | none |
| Local Assembly | spo2 |
| Bowtie Idx | s_cerevisiae_sacCer3 |
| liftOver | none |
| RepeatMasker | none |
| MGA FTP | https://epd.expasy.org/ftp/mga/spo2/ |
| UCSC Genome Browser | https://genome-euro.ucsc.edu/cgi-bin/hgTracks?hubUrl=https://epd.expasy.org/epd/ucsc/epdHub/epdHub.txt&genome=spo2 |
| Assembly support status | full |
Z. mays (Oct 2013 B73 RefGen_v3/zm3)
| NCBI Assembly | https://www.ncbi.nlm.nih.gov/assembly/GCF_000005005.1/ |
| NCBI Version | B73 RefGen_v3 |
| Source | Assembled chromosomes from RefSeq (GCF_000005005.1): https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/005/005/GCF_000005005.1_B73_RefGen_v3/ |
| UCSC Assembly | none (zeaMay_b73) |
| Local Assembly | zm3 |
| Bowtie Idx | z_mays_zm3 |
| liftOver | none |
| RepeatMasker | none |
| MGA FTP | https://epd.expasy.org/ftp/mga/zm3/ |
| UCSC Genome Browser | https://genome-euro.ucsc.edu/cgi-bin/hgTracks?hubUrl=https://epd.expasy.org/epd/ucsc/epdHub/epdHub.txt&genome=zm3 |
| Assembly support status | full |