ENSEMBL, gene feature annotations.

Transcription Start Sites from ENSEMBL gene annotation

• Raw data was downloaded from: BioMart
• Input file format: TXT
• Download date: 11-7-2018

From M. mulatta (Nov 2015 BCM Mmul_8.0.1/rheMac8).

Genome Annotation:

	Filename	Description	Feature	GEO-ID
1	Rm_ensembl92_tss_rheMac8.sga	Transcript (cDNA) starts	TSS	-

Genes were restricted to protein coding genes and that mapped on full chromosomes.

• Zerbino DR, Achuthan P, Akanni W, Amode MR, Barrell D, Bhai J, Billis K, Cummins C, Gall A, Girón CG, Gil L, Gordon L, Haggerty L, Haskell E, Hourlier T, Izuogu OG, Janacek SH, Juettemann T, To JK, Laird MR, Lavidas I, Liu Z, Loveland JE, Maurel T, McLaren W, Moore B, Mudge J, Murphy DN, Newman V, Nuhn M, Ogeh D, Ong CK, Parker A, Patricio M, Riat HS, Schuilenburg H, Sheppard D, Sparrow H, Taylor K, Thormann A, Vullo A, Walts B, Zadissa A, Frankish A, Hunt SE, Kostadima M, Langridge N, Martin FJ, Muffato M, Perry E, Ruffier M, Staines DM, Trevanion SJ, Aken BL, Cunningham F, Yates A, Flicek P
  Ensembl 2018. Nucleic Acids Res. 2018 Jan 4;46(D1):D754-D761. doi: 10.1093/nar/gkx1098. 29155950