ChIP-seq data:
Filename | Description | Feature | GEO-ID | |
1 | GSM1263527.sga | ZKY428|Esa1|t1 | Esa1 | GSM1263527 |
2 | GSM1263528.sga | ZKY428|Esa1|t2 | Esa1 | GSM1263528 |
3 | GSM1263529.sga | ZKY428|Esa1|t3 | Esa1 | GSM1263529 |
4 | GSM1263530.sga | ZKY428|Esa1|t4 | Esa1 | GSM1263530 |
5 | GSM1263531.sga | ZKY428|Esa1|t5 | Esa1 | GSM1263531 |
6 | GSM1263532.sga | ZKY428|Esa1|t6 | Esa1 | GSM1263532 |
7 | GSM1263533.sga | ZKY428|Esa1|t7 | Esa1 | GSM1263533 |
8 | GSM1263534.sga | ZKY428|Esa1|t8 | Esa1 | GSM1263534 |
9 | GSM1263535.sga | ZKY428|Esa1|t9 | Esa1 | GSM1263535 |
10 | GSM1263536.sga | ZKY428|Esa1|t10 | Esa1 | GSM1263536 |
11 | GSM1263537.sga | ZKY428|Esa1|t11 | Esa1 | GSM1263537 |
12 | GSM1263538.sga | ZKY428|Esa1|t12 | Esa1 | GSM1263538 |
13 | GSM1263539.sga | ZKY428|Esa1|t13 | Esa1 | GSM1263539 |
14 | GSM1263540.sga | ZKY428|Esa1|t14 | Esa1 | GSM1263540 |
15 | GSM1263499.sga | ZKY428|Gcn5|t1 | Gcn5 | GSM1263499 |
16 | GSM1263500.sga | ZKY428|Gcn5|t2 | Gcn5 | GSM1263500 |
17 | GSM1263501.sga | ZKY428|Gcn5|t3 | Gcn5 | GSM1263501 |
18 | GSM1263502.sga | ZKY428|Gcn5|t4 | Gcn5 | GSM1263502 |
19 | GSM1263503.sga | ZKY428|Gcn5|t5 | Gcn5 | GSM1263503 |
20 | GSM1263504.sga | ZKY428|Gcn5|t6 | Gcn5 | GSM1263504 |
21 | GSM1263505.sga | ZKY428|Gcn5|t7 | Gcn5 | GSM1263505 |
22 | GSM1263506.sga | ZKY428|Gcn5|t8 | Gcn5 | GSM1263506 |
23 | GSM1263507.sga | ZKY428|Gcn5|t9 | Gcn5 | GSM1263507 |
24 | GSM1263508.sga | ZKY428|Gcn5|t10 | Gcn5 | GSM1263508 |
25 | GSM1263509.sga | ZKY428|Gcn5|t11 | Gcn5 | GSM1263509 |
26 | GSM1263510.sga | ZKY428|Gcn5|t12 | Gcn5 | GSM1263510 |
27 | GSM1263511.sga | ZKY428|Gcn5|t13 | Gcn5 | GSM1263511 |
28 | GSM1263512.sga | ZKY428|Gcn5|t14 | Gcn5 | GSM1263512 |
29 | GSM1263435.sga | ZKY329|H3|t1 | H3 | GSM1263435 |
30 | GSM1263436.sga | ZKY329|H3|t2 | H3 | GSM1263436 |
31 | GSM1263437.sga | ZKY329|H3|t3 | H3 | GSM1263437 |
32 | GSM1263438.sga | ZKY329|H3|t4 | H3 | GSM1263438 |
33 | GSM1263439.sga | ZKY329|H3|t5 | H3 | GSM1263439 |
34 | GSM1263440.sga | ZKY329|H3|t6 | H3 | GSM1263440 |
35 | GSM1263441.sga | ZKY329|H3|t7 | H3 | GSM1263441 |
36 | GSM1263442.sga | ZKY329|H3|t8 | H3 | GSM1263442 |
37 | GSM1263443.sga | ZKY329|H3|t9 | H3 | GSM1263443 |
38 | GSM1263444.sga | ZKY329|H3|t10 | H3 | GSM1263444 |
39 | GSM1263445.sga | ZKY329|H3|t11 | H3 | GSM1263445 |
40 | GSM1263446.sga | ZKY329|H3|t12 | H3 | GSM1263446 |
41 | GSM1263447.sga | ZKY329|H3|t13 | H3 | GSM1263447 |
42 | GSM1263448.sga | ZKY329|H3|t14 | H3 | GSM1263448 |
43 | GSM1263449.sga | ZKY329|H3|t15 | H3 | GSM1263449 |
44 | GSM1263450.sga | ZKY329|H3|t16 | H3 | GSM1263450 |
45 | GSM1263387.sga | ZKY329|H3K14ac|t1 | H3K14ac | GSM1263387 |
46 | GSM1263388.sga | ZKY329|H3K14ac|t2 | H3K14ac | GSM1263388 |
47 | GSM1263389.sga | ZKY329|H3K14ac|t3 | H3K14ac | GSM1263389 |
48 | GSM1263390.sga | ZKY329|H3K14ac|t4 | H3K14ac | GSM1263390 |
49 | GSM1263391.sga | ZKY329|H3K14ac|t5 | H3K14ac | GSM1263391 |
50 | GSM1263392.sga | ZKY329|H3K14ac|t6 | H3K14ac | GSM1263392 |
51 | GSM1263393.sga | ZKY329|H3K14ac|t7 | H3K14ac | GSM1263393 |
52 | GSM1263394.sga | ZKY329|H3K14ac|t8 | H3K14ac | GSM1263394 |
53 | GSM1263395.sga | ZKY329|H3K14ac|t9 | H3K14ac | GSM1263395 |
54 | GSM1263396.sga | ZKY329|H3K14ac|t10 | H3K14ac | GSM1263396 |
55 | GSM1263397.sga | ZKY329|H3K14ac|t11 | H3K14ac | GSM1263397 |
56 | GSM1263398.sga | ZKY329|H3K14ac|t12 | H3K14ac | GSM1263398 |
57 | GSM1263399.sga | ZKY329|H3K14ac|t13 | H3K14ac | GSM1263399 |
58 | GSM1263400.sga | ZKY329|H3K14ac|t14 | H3K14ac | GSM1263400 |
59 | GSM1263401.sga | ZKY329|H3K14ac|t15 | H3K14ac | GSM1263401 |
60 | GSM1263402.sga | ZKY329|H3K14ac|t16 | H3K14ac | GSM1263402 |
61 | GSM1263467.sga | ZKY329|H3K36me3|t1 | H3K36me3 | GSM1263467 |
62 | GSM1263468.sga | ZKY329|H3K36me3|t2 | H3K36me3 | GSM1263468 |
63 | GSM1263469.sga | ZKY329|H3K36me3|t3 | H3K36me3 | GSM1263469 |
64 | GSM1263470.sga | ZKY329|H3K36me3|t4 | H3K36me3 | GSM1263470 |
65 | GSM1263471.sga | ZKY329|H3K36me3|t5 | H3K36me3 | GSM1263471 |
66 | GSM1263472.sga | ZKY329|H3K36me3|t6 | H3K36me3 | GSM1263472 |
67 | GSM1263473.sga | ZKY329|H3K36me3|t7 | H3K36me3 | GSM1263473 |
68 | GSM1263474.sga | ZKY329|H3K36me3|t8 | H3K36me3 | GSM1263474 |
69 | GSM1263475.sga | ZKY329|H3K36me3|t9 | H3K36me3 | GSM1263475 |
70 | GSM1263476.sga | ZKY329|H3K36me3|t10 | H3K36me3 | GSM1263476 |
71 | GSM1263477.sga | ZKY329|H3K36me3|t11 | H3K36me3 | GSM1263477 |
72 | GSM1263478.sga | ZKY329|H3K36me3|t12 | H3K36me3 | GSM1263478 |
73 | GSM1263479.sga | ZKY329|H3K36me3|t13 | H3K36me3 | GSM1263479 |
74 | GSM1263480.sga | ZKY329|H3K36me3|t14 | H3K36me3 | GSM1263480 |
75 | GSM1263481.sga | ZKY329|H3K36me3|t15 | H3K36me3 | GSM1263481 |
76 | GSM1263482.sga | ZKY329|H3K36me3|t16 | H3K36me3 | GSM1263482 |
77 | GSM1263451.sga | ZKY329|H3K4me3|t1 | H3K4me3 | GSM1263451 |
78 | GSM1263452.sga | ZKY329|H3K4me3|t2 | H3K4me3 | GSM1263452 |
79 | GSM1263453.sga | ZKY329|H3K4me3|t3 | H3K4me3 | GSM1263453 |
80 | GSM1263454.sga | ZKY329|H3K4me3|t4 | H3K4me3 | GSM1263454 |
81 | GSM1263455.sga | ZKY329|H3K4me3|t5 | H3K4me3 | GSM1263455 |
82 | GSM1263456.sga | ZKY329|H3K4me3|t6 | H3K4me3 | GSM1263456 |
83 | GSM1263457.sga | ZKY329|H3K4me3|t7 | H3K4me3 | GSM1263457 |
84 | GSM1263458.sga | ZKY329|H3K4me3|t8 | H3K4me3 | GSM1263458 |
85 | GSM1263459.sga | ZKY329|H3K4me3|t9 | H3K4me3 | GSM1263459 |
86 | GSM1263460.sga | ZKY329|H3K4me3|t10 | H3K4me3 | GSM1263460 |
87 | GSM1263461.sga | ZKY329|H3K4me3|t11 | H3K4me3 | GSM1263461 |
88 | GSM1263462.sga | ZKY329|H3K4me3|t12 | H3K4me3 | GSM1263462 |
89 | GSM1263463.sga | ZKY329|H3K4me3|t13 | H3K4me3 | GSM1263463 |
90 | GSM1263464.sga | ZKY329|H3K4me3|t14 | H3K4me3 | GSM1263464 |
91 | GSM1263465.sga | ZKY329|H3K4me3|t15 | H3K4me3 | GSM1263465 |
92 | GSM1263466.sga | ZKY329|H3K4me3|t16 | H3K4me3 | GSM1263466 |
93 | GSM1263403.sga | ZKY329|H3K56ac|t1 | H3K56ac | GSM1263403 |
94 | GSM1263404.sga | ZKY329|H3K56ac|t2 | H3K56ac | GSM1263404 |
95 | GSM1263405.sga | ZKY329|H3K56ac|t3 | H3K56ac | GSM1263405 |
96 | GSM1263406.sga | ZKY329|H3K56ac|t4 | H3K56ac | GSM1263406 |
97 | GSM1263407.sga | ZKY329|H3K56ac|t5 | H3K56ac | GSM1263407 |
98 | GSM1263408.sga | ZKY329|H3K56ac|t6 | H3K56ac | GSM1263408 |
99 | GSM1263409.sga | ZKY329|H3K56ac|t7 | H3K56ac | GSM1263409 |
100 | GSM1263410.sga | ZKY329|H3K56ac|t8 | H3K56ac | GSM1263410 |
101 | GSM1263411.sga | ZKY329|H3K56ac|t9 | H3K56ac | GSM1263411 |
102 | GSM1263412.sga | ZKY329|H3K56ac|t10 | H3K56ac | GSM1263412 |
103 | GSM1263413.sga | ZKY329|H3K56ac|t11 | H3K56ac | GSM1263413 |
104 | GSM1263414.sga | ZKY329|H3K56ac|t12 | H3K56ac | GSM1263414 |
105 | GSM1263415.sga | ZKY329|H3K56ac|t13 | H3K56ac | GSM1263415 |
106 | GSM1263416.sga | ZKY329|H3K56ac|t14 | H3K56ac | GSM1263416 |
107 | GSM1263417.sga | ZKY329|H3K56ac|t15 | H3K56ac | GSM1263417 |
108 | GSM1263418.sga | ZKY329|H3K56ac|t16 | H3K56ac | GSM1263418 |
109 | GSM1263355.sga | BY5765|H3K9ac|t1 | H3K9ac | GSM1263355 |
110 | GSM1263356.sga | BY5765|H3K9ac|t2 | H3K9ac | GSM1263356 |
111 | GSM1263357.sga | BY5765|H3K9ac|t3 | H3K9ac | GSM1263357 |
112 | GSM1263358.sga | BY5765|H3K9ac|t4 | H3K9ac | GSM1263358 |
113 | GSM1263359.sga | BY5765|H3K9ac|t5 | H3K9ac | GSM1263359 |
114 | GSM1263360.sga | BY5765|H3K9ac|t6 | H3K9ac | GSM1263360 |
115 | GSM1263361.sga | BY5765|H3K9ac|t7 | H3K9ac | GSM1263361 |
116 | GSM1263362.sga | BY5765|H3K9ac|t8 | H3K9ac | GSM1263362 |
117 | GSM1263363.sga | BY5765|H3K9ac|t9 | H3K9ac | GSM1263363 |
118 | GSM1263364.sga | BY5765|H3K9ac|t10 | H3K9ac | GSM1263364 |
119 | GSM1263365.sga | BY5765|H3K9ac|t11 | H3K9ac | GSM1263365 |
120 | GSM1263366.sga | BY5765|H3K9ac|t12 | H3K9ac | GSM1263366 |
121 | GSM1263367.sga | BY5765|H3K9ac|t13 | H3K9ac | GSM1263367 |
122 | GSM1263368.sga | BY5765|H3K9ac|t14 | H3K9ac | GSM1263368 |
123 | GSM1263369.sga | BY5765|H3K9ac|t15 | H3K9ac | GSM1263369 |
124 | GSM1263370.sga | BY5765|H3K9ac|t16 | H3K9ac | GSM1263370 |
125 | GSM1263371.sga | ZKY329|H3K9ac|t1 | H3K9ac | GSM1263371 |
126 | GSM1263372.sga | ZKY329|H3K9ac|t2 | H3K9ac | GSM1263372 |
127 | GSM1263373.sga | ZKY329|H3K9ac|t3 | H3K9ac | GSM1263373 |
128 | GSM1263374.sga | ZKY329|H3K9ac|t4 | H3K9ac | GSM1263374 |
129 | GSM1263375.sga | ZKY329|H3K9ac|t5 | H3K9ac | GSM1263375 |
130 | GSM1263376.sga | ZKY329|H3K9ac|t6 | H3K9ac | GSM1263376 |
131 | GSM1263377.sga | ZKY329|H3K9ac|t7 | H3K9ac | GSM1263377 |
132 | GSM1263378.sga | ZKY329|H3K9ac|t8 | H3K9ac | GSM1263378 |
133 | GSM1263379.sga | ZKY329|H3K9ac|t9 | H3K9ac | GSM1263379 |
134 | GSM1263380.sga | ZKY329|H3K9ac|t10 | H3K9ac | GSM1263380 |
135 | GSM1263381.sga | ZKY329|H3K9ac|t11 | H3K9ac | GSM1263381 |
136 | GSM1263382.sga | ZKY329|H3K9ac|t12 | H3K9ac | GSM1263382 |
137 | GSM1263383.sga | ZKY329|H3K9ac|t13 | H3K9ac | GSM1263383 |
138 | GSM1263384.sga | ZKY329|H3K9ac|t14 | H3K9ac | GSM1263384 |
139 | GSM1263385.sga | ZKY329|H3K9ac|t15 | H3K9ac | GSM1263385 |
140 | GSM1263386.sga | ZKY329|H3K9ac|t16 | H3K9ac | GSM1263386 |
141 | GSM1263483.sga | ZKY329|H4K16ac|t1 | H4K16ac | GSM1263483 |
142 | GSM1263484.sga | ZKY329|H4K16ac|t2 | H4K16ac | GSM1263484 |
143 | GSM1263485.sga | ZKY329|H4K16ac|t3 | H4K16ac | GSM1263485 |
144 | GSM1263486.sga | ZKY329|H4K16ac|t4 | H4K16ac | GSM1263486 |
145 | GSM1263487.sga | ZKY329|H4K16ac|t5 | H4K16ac | GSM1263487 |
146 | GSM1263488.sga | ZKY329|H4K16ac|t6 | H4K16ac | GSM1263488 |
147 | GSM1263489.sga | ZKY329|H4K16ac|t7 | H4K16ac | GSM1263489 |
148 | GSM1263490.sga | ZKY329|H4K16ac|t8 | H4K16ac | GSM1263490 |
149 | GSM1263491.sga | ZKY329|H4K16ac|t9 | H4K16ac | GSM1263491 |
150 | GSM1263492.sga | ZKY329|H4K16ac|t10 | H4K16ac | GSM1263492 |
151 | GSM1263493.sga | ZKY329|H4K16ac|t11 | H4K16ac | GSM1263493 |
152 | GSM1263494.sga | ZKY329|H4K16ac|t12 | H4K16ac | GSM1263494 |
153 | GSM1263495.sga | ZKY329|H4K16ac|t13 | H4K16ac | GSM1263495 |
154 | GSM1263496.sga | ZKY329|H4K16ac|t14 | H4K16ac | GSM1263496 |
155 | GSM1263497.sga | ZKY329|H4K16ac|t15 | H4K16ac | GSM1263497 |
156 | GSM1263498.sga | ZKY329|H4K16ac|t16 | H4K16ac | GSM1263498 |
157 | GSM1263419.sga | ZKY329|H4K5ac|t1 | H4K5ac | GSM1263419 |
158 | GSM1263420.sga | ZKY329|H4K5ac|t2 | H4K5ac | GSM1263420 |
159 | GSM1263421.sga | ZKY329|H4K5ac|t3 | H4K5ac | GSM1263421 |
160 | GSM1263422.sga | ZKY329|H4K5ac|t4 | H4K5ac | GSM1263422 |
161 | GSM1263423.sga | ZKY329|H4K5ac|t5 | H4K5ac | GSM1263423 |
162 | GSM1263424.sga | ZKY329|H4K5ac|t6 | H4K5ac | GSM1263424 |
163 | GSM1263425.sga | ZKY329|H4K5ac|t7 | H4K5ac | GSM1263425 |
164 | GSM1263426.sga | ZKY329|H4K5ac|t8 | H4K5ac | GSM1263426 |
165 | GSM1263427.sga | ZKY329|H4K5ac|t9 | H4K5ac | GSM1263427 |
166 | GSM1263428.sga | ZKY329|H4K5ac|t10 | H4K5ac | GSM1263428 |
167 | GSM1263429.sga | ZKY329|H4K5ac|t11 | H4K5ac | GSM1263429 |
168 | GSM1263430.sga | ZKY329|H4K5ac|t12 | H4K5ac | GSM1263430 |
169 | GSM1263431.sga | ZKY329|H4K5ac|t13 | H4K5ac | GSM1263431 |
170 | GSM1263432.sga | ZKY329|H4K5ac|t14 | H4K5ac | GSM1263432 |
171 | GSM1263433.sga | ZKY329|H4K5ac|t15 | H4K5ac | GSM1263433 |
172 | GSM1263434.sga | ZKY329|H4K5ac|t16 | H4K5ac | GSM1263434 |
173 | GSM1263513.sga | ZKY428|Set1|t1 | HA | GSM1263513 |
174 | GSM1263514.sga | ZKY428|Set1|t2 | HA | GSM1263514 |
175 | GSM1263515.sga | ZKY428|Set1|t3 | HA | GSM1263515 |
176 | GSM1263516.sga | ZKY428|Set1|t4 | HA | GSM1263516 |
177 | GSM1263517.sga | ZKY428|Set1|t5 | HA | GSM1263517 |
178 | GSM1263518.sga | ZKY428|Set1|t6 | HA | GSM1263518 |
179 | GSM1263519.sga | ZKY428|Set1|t7 | HA | GSM1263519 |
180 | GSM1263520.sga | ZKY428|Set1|t8 | HA | GSM1263520 |
181 | GSM1263521.sga | ZKY428|Set1|t9 | HA | GSM1263521 |
182 | GSM1263522.sga | ZKY428|Set1|t10 | HA | GSM1263522 |
183 | GSM1263523.sga | ZKY428|Set1|t11 | HA | GSM1263523 |
184 | GSM1263524.sga | ZKY428|Set1|t12 | HA | GSM1263524 |
185 | GSM1263525.sga | ZKY428|Set1|t13 | HA | GSM1263525 |
186 | GSM1263526.sga | ZKY428|Set1|t14 | HA | GSM1263526 |
All yeast strains were generated from the previously described strain CEN.PK with the following modifications:
FASTQ files were extracted from SRA files using fastq-dump (SRA toolkit v2.5.0) and mapped to the genome using Bowtie v0.12.8. SAM files were then converted into bam using samtools v0.1.14 and to bed using bamToBed v2.12.0 (bedtools). SGA conversion was carried out using bed2sga.pl (ChIP-Seq v. 1.5.3).