Zea mays Promoter collection from Gramene.

Transcription start sites (TSS) and CDS start sites annotations derived from Gramene.

• Raw data was downloaded from: Gramene Mart v50
• Input file format: TXT
• Download date: 12-06-2016

From Z. mays (Oct 2013 B73 RefGen_v3/zm3).

Genome Annotation:

	Filename	Description	Feature	GEO-ID
1	zm_gramene_tss.sga	TSS from Gramene	ENSEMBL	-

Text file was converted into SGA format using in-house scripts

• Tello-Ruiz MK, Stein J, Wei S, Preece J, Olson A, Naithani S, Amarasinghe V, Dharmawardhana P, Jiao Y, Mulvaney J, Kumari S, Chougule K, Elser J, Wang B, Thomason J, Bolser DM, Kerhornou A, Walts B, Fonseca NA, Huerta L, Keays M, Tang YA, Parkinson H, Fabregat A, McKay S, Weiser J, D'Eustachio P, Stein L, Petryszak R, Kersey PJ, Jaiswal P, Ware D
  Gramene 2016: comparative plant genomics and pathway resources. Nucleic Acids Res. 2016 Jan 4;44(D1):D1133-40. doi: 10.1093/nar/gkv1179. Epub 2015 Nov 8. 26553803