Below is a list of Ultraconserved Non-Coding Elements (UCNEs) that reside on the chromosome chrX in the Human genome (hg19 assembly).

UCNE nameUCNE IDPositionTypeLength Overlapping geneUpstream geneDownstream geneParalogs
chrX_Amanda 35632 chrX:17753770-17754111 UTR3 342NHS
ARX_Alexander 35672 chrX:24823349-24823926 intron 578POLA1
ARX_Amadeus 35674 chrX:24864783-24865249 intron 467POLA1
ARX_Ava 35676 chrX:24884208-24884424 intron 217POLA1
ARX_Chao 35677 chrX:24884656-24884921 intron 266POLA1
ARX_Clara 35678 chrX:24894826-24895492 intron 667POLA1
ARX_Eden 35682 chrX:24915877-24916940 intron 1064POLA1
ARX_Felix 35683 chrX:24917465-24917896 intron 432POLA1
ARX_Figaro 35686 chrX:24946385-24946893 intron 509POLA1
ARX_Griselda 35690 chrX:24984854-24985103 intron 250POLA1
ARX_Harper 35691 chrX:24998587-24998786 intron 200POLA1
ARX_Jun 35692 chrX:24999585-24999825 intron 241POLA1
ARX_Napoleon 35699 chrX:25008264-25009281 intron 1018POLA1
ARX_Nemo 35702 chrX:25017644-25017964 intergenic 321POLA1ARX
ARX_Nick 35703 chrX:25068256-25068681 intergenic 426ARXMAGEB18
ARX_Scheherazade 35706 chrX:25401312-25401711 intergenic 400ARXMAGEB18
ARX_Tarzan 35708 chrX:25668567-25668782 intergenic 216ARXMAGEB18
chrX_Andrew 35728 chrX:31139585-31139931 UTR5 347DMD
chrX_Aphrodite 35751 chrX:33357383-33357668 UTR3 286DMD
chrX_Atsuko 35752 chrX:34645473-34645704 UTR5 232TMEM47
DDX3X_Alice 35802 chrX:41091778-41092093 UTR3 316USP9XchrY:14971348-14971659; chrX:22499862-22500017; chr1:81802035-81802148; chrY:14969677-14969761;
DDX3X_Antonio 35803 chrX:41092240-41092467 UTR3 228USP9XchrY:14971793-14971999; chrY:20993848-20993920; chrY:20650254-20650326; chrY:26088714-26088785; chrY:27873621-27873692;
DDX3X_Atsuko 35805 chrX:41093067-41093276 UTR3 210USP9XchrY:14972591-14972794;
DDX3X_Hector 35808 chrX:41207219-41207447 UTR3 229DDX3XchrY:15030283-15030508; chrX:73359134-73359360; chr4:104495487-104495690;
DDX3X_Lincoln 35809 chrX:41207523-41207725 UTR3 203DDX3Xchr4:104495773-104495975; chrX:73359439-73359645; chrY:15030586-15030784;
DDX3X_Sherlock 35813 chrX:41208369-41208591 UTR3 223DDX3Xchr8:26922360-26922582; chr10:118782918-118783138; chrY:15031382-15031597; chr4:104496602-104496832; chrX:73364448-73364667;
DDX3X_Theodore 35814 chrX:41208660-41209003 UTR3 344DDX3Xchr8:26921949-26922291; chr10:118782509-118782849; chr4:104496901-104497230; chrY:15031657-15031989; chrX:73364727-73365061; chr2:55333956-55334186; chrX:74898535-74898712;
DDX3X_Zhong 35821 chrX:41379235-41379583 UTR5 349CASKchrY:15041657-15041989;
chrX_Beata 35867 chrX:44971125-44971560 UTR3 436KDM6AchrY:15360861-15361287;
chrX_Bryan 35951 chrX:70766096-70766436 intron 341OGT
chrX_Lukas 35985 chrX:76761391-76761620 UTR5 230ATRXchr8:19016629-19016855;
POU3F4_Aurore 36000 chrX:81464503-81464841 intergenic 339SH3BGRLPOU3F4
POU3F4_Benjamin 36002 chrX:81697749-81698113 intergenic 365SH3BGRLPOU3F4
POU3F4_Griselda 36005 chrX:81789604-81789840 intergenic 237SH3BGRLPOU3F4
POU3F4_Helen 36009 chrX:81979173-81979745 intergenic 573SH3BGRLPOU3F4
POU3F4_Nagasawa 36010 chrX:82082717-82082988 intergenic 272SH3BGRLPOU3F4
POU3F4_Poseidon 36011 chrX:82400995-82401211 intergenic 217SH3BGRLPOU3F4
POU3F4_Roman 36013 chrX:82591525-82591724 intergenic 200SH3BGRLPOU3F4
POU3F4_Santiago 36016 chrX:82751000-82751365 intergenic 366SH3BGRLPOU3F4
POU3F4_Vincent 36017 chrX:82754222-82754433 intergenic 212SH3BGRLPOU3F4chr8:116869740-116869932;
POU3F4_Zeus 36020 chrX:82766765-82766968 intergenic 204POU3F4CYLC1
DACH2_Wei 36035 chrX:85131497-85131736 intron 240CHM
DACH2_Virginia 36036 chrX:85156846-85157060 intron 215CHM
DACH2_Vincent 36037 chrX:85165668-85165924 intron 257CHMchr13:73087858-73088048;
DACH2_Ruby 36047 chrX:85409544-85409871 intron 328DACH2
DACH2_Patricia 36048 chrX:85412425-85412697 intron 273DACH2
DACH2_Oskar 36054 chrX:85465778-85466134 intron 357DACH2
DACH2_Napoleon 36056 chrX:85514063-85514423 intron 361DACH2
DACH2_Mignon 36066 chrX:85638655-85638911 intron 257DACH2
DACH2_Midori 36072 chrX:85716526-85716738 intron 213DACH2
DACH2_Frodo 36076 chrX:85802940-85803174 intron 235DACH2chr13:72234254-72234437;
DACH2_Flora 36079 chrX:85819320-85819609 intron 290DACH2
DACH2_Figaro 36086 chrX:85923430-85923684 intron 255DACH2chr13:72199306-72199388;
DACH2_Hana 36087 chrX:85932736-85933047 intron 312DACH2chr13:72198899-72199043;
DACH2_Clara 36092 chrX:86064605-86065182 intron 578DACH2
DACH2_Ariane 36093 chrX:86074479-86074940 intron 462DACH2
chrX_Mateo 36118 chrX:96737676-96737919 intron 244DIAPH2
chrX_Maxwell 36217 chrX:122599250-122599677 intron 312GRIA3
chrX_Nora 36238 chrX:123235351-123235698 UTR3 348STAG2
chrX_Prometheus 36241 chrX:123236165-123236369 UTR3 205STAG2chr1:56524996-56525175;
DCAF12L2_Aurore 36248 chrX:123903067-123903386 intron 320ODZ1
DCAF12L2_Emi 36251 chrX:124260030-124260253 intergenic 224ODZ1DCAF12L2
DCAF12L2_Larisa 36255 chrX:124512709-124512942 intergenic 234ODZ1DCAF12L2
DCAF12L2_Mauritius 36256 chrX:124653780-124654156 intergenic 377ODZ1DCAF12L2
ZIC3_Beatrice 36330 chrX:136317153-136317665 intergenic 513GPR101ZIC3chr13:100395407-100395604;
ZIC3_Frederica 36334 chrX:136353629-136353907 intergenic 279GPR101ZIC3chr13:100506670-100506832;
ZIC3_Hana 36342 chrX:136652754-136652976 UTR3 223ZIC3
ZIC3_Jacob 36347 chrX:136829401-136829639 intergenic 239ZIC3LOC158696chr13:100909731-100909915;
ZIC3_Lincoln 36354 chrX:137064672-137065062 intergenic 391ZIC3LOC158696
SOX3_Adela 36373 chrX:139381246-139381510 intergenic 265CXorf66SOX3
SOX3_Scout 36376 chrX:139594110-139594310 intergenic 201SOX3RP1-177G6.2
SOX3_Vanessa 36378 chrX:139614652-139614913 intergenic 262SOX3RP1-177G6.2
SOX3_Zoltan 36381 chrX:139674962-139675267 intergenic 306SOX3RP1-177G6.2
chrX_Vera 36395 chrX:147031884-147032193 UTR3 310FMR1
chrX_Violet 36415 chrX:147829436-147829728 intron 293AFF2
chrX_Whitney 36421 chrX:147881083-147881365 intron 283AFF2
chrX_Yves 36439 chrX:148395153-148395547 intergenic 395AFF2IDS