Ultraconserved Genomic Regulatory Block: GSX1_cluster
(id = 139)

General information about the entry
Representative name:GSX1_cluster
Position:chr13:28079232-28868654
# UCNEs:8
Assiciated genes:ATP5EP2; CDX2; FLT3; GSX1; LNX2; MTIF3; PAN3; PAN3-AS1; PDX1; POLR1D; PRHOXNB;
Possible target genes:GSX1;
UCNEs forming the cluster:GSX1_Abraham; GSX1_Andrew; GSX1_Felix; GSX1_Frederica; GSX1_Leopold; GSX1_Othell; GSX1_Quentin; GSX1_Victor;
Paralogous cluster(s):GSX2_cluster;

View cluster image
Conservation in chicken:
Chicken (galGal3): Position: chr1:180530975-180227805
Associated genes: CDX2; GTF3A;
Conservation in other species:
Mouse (mm10):
Subcluster #1

Position:

chr5:146994099-147547626
# UCNEs:8
UCNEs:GSX1_Abraham; GSX1_Andrew; GSX1_Felix; GSX1_Frederica; GSX1_Leopold; GSX1_Othell; GSX1_Quentin; GSX1_Victor;


Opossum (monDom5):
Subcluster #1

Position:

chr4:297965850-298340595
# UCNEs:7
UCNEs:GSX1_Abraham; GSX1_Andrew; GSX1_Felix; GSX1_Frederica; GSX1_Leopold; GSX1_Othell; GSX1_Quentin;
Subcluster #2

Position:

chr4:298903432-298903637
# UCNEs:1
UCNEs:GSX1_Victor;


Platypus (ornAna1):
Subcluster #1

Position:

Contig59:2232896-2621824
# UCNEs:8
UCNEs:GSX1_Abraham; GSX1_Andrew; GSX1_Felix; GSX1_Frederica; GSX1_Leopold; GSX1_Othell; GSX1_Quentin; GSX1_Victor;


Zebra_finch (taeGut1):
Subcluster #1

Position:

chr1:49021302-49381620
# UCNEs:8
UCNEs:GSX1_Abraham; GSX1_Andrew; GSX1_Felix; GSX1_Frederica; GSX1_Leopold; GSX1_Othell; GSX1_Quentin; GSX1_Victor;


Lizard (anoCar2):
Subcluster #1

Position:

chr3:185773666-185773885
# UCNEs:1
UCNEs:GSX1_Victor;
Subcluster #2

Position:

chrUn_GL343306:1202661-1437859
# UCNEs:7
UCNEs:GSX1_Abraham; GSX1_Andrew; GSX1_Felix; GSX1_Frederica; GSX1_Leopold; GSX1_Othell; GSX1_Quentin;


Painted_turtle (chrPic1):
Subcluster #1

Position:

JH584512:7185867-7830640
# UCNEs:8
UCNEs:GSX1_Abraham; GSX1_Andrew; GSX1_Felix; GSX1_Frederica; GSX1_Leopold; GSX1_Othell; GSX1_Quentin; GSX1_Victor;


Xenopus (xenTro3):
Subcluster #1

Position:

GL172716:2744967-3043372
# UCNEs:7
UCNEs:GSX1_Andrew; GSX1_Felix; GSX1_Frederica; GSX1_Leopold; GSX1_Othell; GSX1_Quentin; GSX1_Victor;
Subcluster #2

Position:

GL173431:370963-371473
# UCNEs:1
UCNEs:GSX1_Abraham;


Fugu (fr2):
Subcluster #1

Position:

chrUn:25984175-25999914
# UCNEs:4
UCNEs:GSX1_Abraham; GSX1_Leopold; GSX1_Othell; GSX1_Quentin;


Medaka (oryLat2):
Subcluster #1

Position:

chr14:14305125-14330579
# UCNEs:4
UCNEs:GSX1_Abraham; GSX1_Leopold; GSX1_Othell; GSX1_Quentin;


Stickleback (gasAcu1):
Subcluster #1

Position:

chrVII:22275217-22293273
# UCNEs:4
UCNEs:GSX1_Abraham; GSX1_Leopold; GSX1_Othell; GSX1_Quentin;


Tetraodon (tetNig2):
Subcluster #1

Position:

chr7:4962199-4976325
# UCNEs:4
UCNEs:GSX1_Abraham; GSX1_Leopold; GSX1_Othell; GSX1_Quentin;


Zebrafish (danRer7):
Subcluster #1

Position:

chr5:71011744-71061422
# UCNEs:4
UCNEs:GSX1_Abraham; GSX1_Leopold; GSX1_Othell; GSX1_Quentin;