Ultraconserved Genomic Regulatory Block: SOX1_cluster
(id = 158)

General information about the entry
Representative name:SOX1_cluster
Position:chr13:112631109-112793888
# UCNEs:4
Assiciated genes:SOX1; SPACA7; TEX29;
Possible target genes:SOX1;
UCNEs forming the cluster:SOX1_Julia; SOX1_Mauritius; SOX1_Oberon; SOX1_Victor;
Paralogous cluster(s):

View cluster image
Conservation in chicken:
Chicken (galGal3): Position: chr1:144023730-144115848
Associated genes: ANKRD10; MIR1632; SOX1; TNFSF13B;
Conservation in other species:
Mouse (mm10):
Subcluster #1

Position:

chr8:12327809-12463108
# UCNEs:4
UCNEs:SOX1_Julia; SOX1_Mauritius; SOX1_Oberon; SOX1_Victor;


Opossum (monDom5):
Subcluster #1

Position:

chr7:79508713-79750988
# UCNEs:4
UCNEs:SOX1_Julia; SOX1_Mauritius; SOX1_Oberon; SOX1_Victor;


Platypus (ornAna1):
Subcluster #1

Position:

Ultra336:9127396-9196228
# UCNEs:3
UCNEs:SOX1_Julia; SOX1_Oberon; SOX1_Victor;


Zebra_finch (taeGut1):
Subcluster #1

Position:

chr1:25339054-25438914
# UCNEs:4
UCNEs:SOX1_Julia; SOX1_Mauritius; SOX1_Oberon; SOX1_Victor;


Lizard (anoCar2):
Subcluster #1

Position:

chr3:105223127-105391965
# UCNEs:4
UCNEs:SOX1_Julia; SOX1_Mauritius; SOX1_Oberon; SOX1_Victor;


Painted_turtle (chrPic1):
Subcluster #1

Position:

JH584840:877453-1061050
# UCNEs:4
UCNEs:SOX1_Julia; SOX1_Mauritius; SOX1_Oberon; SOX1_Victor;


Xenopus (xenTro3):
Subcluster #1

Position:

GL172678:580138-683909
# UCNEs:4
UCNEs:SOX1_Julia; SOX1_Mauritius; SOX1_Oberon; SOX1_Victor;


Fugu (fr2):
Subcluster #1

Position:

chrUn:100852894-100858178
# UCNEs:2
UCNEs:SOX1_Mauritius; SOX1_Oberon;
Subcluster #2

Position:

chrUn:293757358-293757649
# UCNEs:1
UCNEs:SOX1_Oberon;


Medaka (oryLat2):
Subcluster #1

Position:

chr21:11387869-11393119
# UCNEs:2
UCNEs:SOX1_Mauritius; SOX1_Oberon;


Stickleback (gasAcu1):
Subcluster #1

Position:

chrI:22999718-23000005
# UCNEs:1
UCNEs:SOX1_Oberon;
Subcluster #2

Position:

chrXVI:7104773-7110377
# UCNEs:2
UCNEs:SOX1_Mauritius; SOX1_Oberon;


Tetraodon (tetNig2):
Subcluster #1

Position:

chr2:11117537-11122849
# UCNEs:2
UCNEs:SOX1_Mauritius; SOX1_Oberon;
Subcluster #2

Position:

chr3:6750700-6750991
# UCNEs:1
UCNEs:SOX1_Oberon;


Zebrafish (danRer7):
Subcluster #1

Position:

chr1:46671857-46695703
# UCNEs:2
UCNEs:SOX1_Julia; SOX1_Oberon;
Subcluster #2

Position:

chr9:22760015-22760336
# UCNEs:1
UCNEs:SOX1_Oberon;