Ultraconserved Genomic Regulatory Block: SHOX2_cluster
(id = 368)

General information about the entry
Representative name:SHOX2_cluster
Position:chr3:157574121-158246256
# UCNEs:19
Assiciated genes:C3orf55; RSRC1; SHOX2;
Possible target genes:SHOX2;
UCNEs forming the cluster:SHOX2_Aida; SHOX2_Alice; SHOX2_Amos; SHOX2_Andrew; SHOX2_Aphrodite; SHOX2_Ariel; SHOX2_Aurore; SHOX2_Dominica; SHOX2_Emi; SHOX2_Faust; SHOX2_Franz; SHOX2_Harper; SHOX2_Joshua_1; SHOX2_Joshua_2; SHOX2_Ryan; SHOX2_Ursula; SHOX2_Vanessa; SHOX2_Veronica; SHOX2_Vincent;
Paralogous cluster(s):

View cluster image
Conservation in chicken:
Chicken (galGal3): Position: chr9:24208255-24056110
Associated genes: PTX3; RARRES1;
Conservation in other species:
Mouse (mm10):
Subcluster #1

Position:
chr3:66683972-67341053
# UCNEs:19
UCNEs:SHOX2_Aida; SHOX2_Alice; SHOX2_Amos; SHOX2_Andrew; SHOX2_Aphrodite; SHOX2_Ariel; SHOX2_Aurore; SHOX2_Dominica; SHOX2_Emi; SHOX2_Faust; SHOX2_Franz; SHOX2_Harper; SHOX2_Joshua_1; SHOX2_Joshua_2; SHOX2_Ryan; SHOX2_Ursula; SHOX2_Vanessa; SHOX2_Veronica; SHOX2_Vincent;
Opossum (monDom5):
Subcluster #1

Position:
chr7:243353216-244037495
# UCNEs:19
UCNEs:SHOX2_Aida; SHOX2_Alice; SHOX2_Amos; SHOX2_Andrew; SHOX2_Aphrodite; SHOX2_Ariel; SHOX2_Aurore; SHOX2_Dominica; SHOX2_Emi; SHOX2_Faust; SHOX2_Franz; SHOX2_Harper; SHOX2_Joshua_1; SHOX2_Joshua_2; SHOX2_Ryan; SHOX2_Ursula; SHOX2_Vanessa; SHOX2_Veronica; SHOX2_Vincent;
Platypus (ornAna1):
Subcluster #1

Position:
Contig1000:9714-183949
# UCNEs:7
UCNEs:SHOX2_Franz; SHOX2_Harper; SHOX2_Joshua_1; SHOX2_Joshua_2; SHOX2_Ryan; SHOX2_Veronica; SHOX2_Vincent;
Subcluster #2

Position:
Contig10656:19010-19377
# UCNEs:1
UCNEs:SHOX2_Ursula;
Subcluster #3

Position:
Contig12861:9466-10341
# UCNEs:2
UCNEs:SHOX2_Aurore; SHOX2_Dominica;
Subcluster #4

Position:
Contig13647:13531-17122
# UCNEs:2
UCNEs:SHOX2_Andrew; SHOX2_Aphrodite;
Subcluster #5

Position:
Contig15558:5338-5606
# UCNEs:1
UCNEs:SHOX2_Vanessa;
Subcluster #6

Position:
Contig24661:2989-3219
# UCNEs:1
UCNEs:SHOX2_Faust;
Subcluster #7

Position:
Contig4460:11349-11931
# UCNEs:1
UCNEs:SHOX2_Emi;
Subcluster #8

Position:
Contig6669:12252-12960
# UCNEs:1
UCNEs:SHOX2_Ariel;
Subcluster #9

Position:
Ultra381:18441-62711
# UCNEs:3
UCNEs:SHOX2_Aida; SHOX2_Alice; SHOX2_Amos;
Zebra_finch (taeGut1):
Subcluster #1

Position:
chr9:25825345-25978438
# UCNEs:18
UCNEs:SHOX2_Aida; SHOX2_Alice; SHOX2_Amos; SHOX2_Andrew; SHOX2_Aphrodite; SHOX2_Ariel; SHOX2_Aurore; SHOX2_Emi; SHOX2_Faust; SHOX2_Franz; SHOX2_Harper; SHOX2_Joshua_1; SHOX2_Joshua_2; SHOX2_Ryan; SHOX2_Ursula; SHOX2_Vanessa; SHOX2_Veronica; SHOX2_Vincent;
Lizard (anoCar2):
Subcluster #1

Position:
chr3:14197893-14627566
# UCNEs:19
UCNEs:SHOX2_Aida; SHOX2_Alice; SHOX2_Amos; SHOX2_Andrew; SHOX2_Aphrodite; SHOX2_Ariel; SHOX2_Aurore; SHOX2_Dominica; SHOX2_Emi; SHOX2_Faust; SHOX2_Franz; SHOX2_Harper; SHOX2_Joshua_1; SHOX2_Joshua_2; SHOX2_Ryan; SHOX2_Ursula; SHOX2_Vanessa; SHOX2_Veronica; SHOX2_Vincent;
Painted_turtle (chrPic1):
Subcluster #1

Position:
JH584515:4813935-5325999
# UCNEs:17
UCNEs:SHOX2_Aida; SHOX2_Alice; SHOX2_Amos; SHOX2_Andrew; SHOX2_Aphrodite; SHOX2_Ariel; SHOX2_Aurore; SHOX2_Dominica; SHOX2_Emi; SHOX2_Faust; SHOX2_Franz; SHOX2_Harper; SHOX2_Ryan; SHOX2_Ursula; SHOX2_Vanessa; SHOX2_Veronica; SHOX2_Vincent;
Xenopus (xenTro3):
Subcluster #1

Position:
GL172686:1770358-2014496
# UCNEs:19
UCNEs:SHOX2_Aida; SHOX2_Alice; SHOX2_Amos; SHOX2_Andrew; SHOX2_Aphrodite; SHOX2_Ariel; SHOX2_Aurore; SHOX2_Dominica; SHOX2_Emi; SHOX2_Faust; SHOX2_Franz; SHOX2_Harper; SHOX2_Joshua_1; SHOX2_Joshua_2; SHOX2_Ryan; SHOX2_Ursula; SHOX2_Vanessa; SHOX2_Veronica; SHOX2_Vincent;
Fugu (fr2):
Subcluster #1

Position:
chrUn:34476079-34592974
# UCNEs:16
UCNEs:SHOX2_Aida; SHOX2_Amos; SHOX2_Andrew; SHOX2_Aphrodite; SHOX2_Aurore; SHOX2_Emi; SHOX2_Faust; SHOX2_Franz; SHOX2_Harper; SHOX2_Joshua_1; SHOX2_Joshua_2; SHOX2_Ryan; SHOX2_Ursula; SHOX2_Vanessa; SHOX2_Veronica; SHOX2_Vincent;
Subcluster #2

Position:
chrUn:82107102-82174348
# UCNEs:2
UCNEs:SHOX2_Andrew; SHOX2_Harper;
Medaka (oryLat2):
Subcluster #1

Position:
chr13:14718420-14895588
# UCNEs:16
UCNEs:SHOX2_Aida; SHOX2_Amos; SHOX2_Andrew; SHOX2_Aphrodite; SHOX2_Aurore; SHOX2_Emi; SHOX2_Faust; SHOX2_Franz; SHOX2_Harper; SHOX2_Joshua_1; SHOX2_Joshua_2; SHOX2_Ryan; SHOX2_Ursula; SHOX2_Vanessa; SHOX2_Veronica; SHOX2_Vincent;
Stickleback (gasAcu1):
Subcluster #1

Position:
chrI:8712795-8844719
# UCNEs:14
UCNEs:SHOX2_Aida; SHOX2_Alice; SHOX2_Amos; SHOX2_Andrew; SHOX2_Aphrodite; SHOX2_Aurore; SHOX2_Emi; SHOX2_Faust; SHOX2_Harper; SHOX2_Joshua_1; SHOX2_Ryan; SHOX2_Ursula; SHOX2_Vanessa; SHOX2_Vincent;
Tetraodon (tetNig2):
Subcluster #1

Position:
chr16:1081856-1134392
# UCNEs:6
UCNEs:SHOX2_Aida; SHOX2_Amos; SHOX2_Andrew; SHOX2_Aphrodite; SHOX2_Aurore; SHOX2_Emi;
Subcluster #2

Position:
chr2:9797286-9797438
# UCNEs:1
UCNEs:SHOX2_Andrew;
Subcluster #3

Position:
chrUn_random:53124525-53129210
# UCNEs:2
UCNEs:SHOX2_Veronica; SHOX2_Vincent;
Subcluster #4

Position:
chrUn_random:74129383-74170992
# UCNEs:9
UCNEs:SHOX2_Aurore; SHOX2_Emi; SHOX2_Faust; SHOX2_Franz; SHOX2_Harper; SHOX2_Joshua_1; SHOX2_Joshua_2; SHOX2_Ryan; SHOX2_Ursula;
Zebrafish (danRer7):
Subcluster #1

Position:
chr15:2074843-2373175
# UCNEs:13
UCNEs:SHOX2_Aida; SHOX2_Amos; SHOX2_Andrew; SHOX2_Aphrodite; SHOX2_Ariel; SHOX2_Aurore; SHOX2_Harper; SHOX2_Joshua_1; SHOX2_Joshua_2; SHOX2_Ryan; SHOX2_Ursula; SHOX2_Vanessa; SHOX2_Vincent;
Subcluster #2

Position:
chr9:35531966-35679719
# UCNEs:2
UCNEs:SHOX2_Andrew; SHOX2_Harper;