Ultraconserved Genomic Regulatory Block: NKX6-1_cluster
(id = 392)

General information about the entry
Representative name:NKX6-1_cluster
Position:chr4:84597991-85364995
# UCNEs:19
Assiciated genes:AGPAT9; NKX6-1;
Possible target genes:NKX6-1;
UCNEs forming the cluster:NKX6-1_Achilles; NKX6-1_Apollo; NKX6-1_Ava; NKX6-1_Bryan; NKX6-1_Chen; NKX6-1_Delphina; NKX6-1_Franz; NKX6-1_Hector; NKX6-1_Joshua; NKX6-1_Laura; NKX6-1_Leo; NKX6-1_Lucifer; NKX6-1_Mateo; NKX6-1_Ophelia; NKX6-1_Prometheus; NKX6-1_Siddhartha; NKX6-1_Tarzan; NKX6-1_Traviata; NKX6-1_Vivien;
Paralogous cluster(s):NKX6-2_cluster;

View cluster image
Conservation in chicken:
Chicken (galGal3): Position: chr4:48001052-48252495
Associated genes: AGPAT9; MIR1730;
Conservation in other species:
Mouse (mm10):
Subcluster #1

Position:
chr5:100947210-101603531
# UCNEs:19
UCNEs:NKX6-1_Achilles; NKX6-1_Apollo; NKX6-1_Ava; NKX6-1_Bryan; NKX6-1_Chen; NKX6-1_Delphina; NKX6-1_Franz; NKX6-1_Hector; NKX6-1_Joshua; NKX6-1_Laura; NKX6-1_Leo; NKX6-1_Lucifer; NKX6-1_Mateo; NKX6-1_Ophelia; NKX6-1_Prometheus; NKX6-1_Siddhartha; NKX6-1_Tarzan; NKX6-1_Traviata; NKX6-1_Vivien;
Opossum (monDom5):
Subcluster #1

Position:
chr5:55380042-56558199
# UCNEs:18
UCNEs:NKX6-1_Achilles; NKX6-1_Apollo; NKX6-1_Ava; NKX6-1_Chen; NKX6-1_Delphina; NKX6-1_Franz; NKX6-1_Hector; NKX6-1_Joshua; NKX6-1_Laura; NKX6-1_Leo; NKX6-1_Lucifer; NKX6-1_Mateo; NKX6-1_Ophelia; NKX6-1_Prometheus; NKX6-1_Siddhartha; NKX6-1_Tarzan; NKX6-1_Traviata; NKX6-1_Vivien;
Platypus (ornAna1):
Subcluster #1

Position:
Contig13009:13236-13837
# UCNEs:1
UCNEs:NKX6-1_Ava;
Subcluster #2

Position:
Contig1806:3932-77083
# UCNEs:7
UCNEs:NKX6-1_Joshua; NKX6-1_Laura; NKX6-1_Lucifer; NKX6-1_Mateo; NKX6-1_Ophelia; NKX6-1_Prometheus; NKX6-1_Siddhartha;
Subcluster #3

Position:
Contig1996:27125-56565
# UCNEs:2
UCNEs:NKX6-1_Delphina; NKX6-1_Franz;
Subcluster #4

Position:
Contig3908:16247-27247
# UCNEs:3
UCNEs:NKX6-1_Tarzan; NKX6-1_Traviata; NKX6-1_Vivien;
Subcluster #5

Position:
Contig578:256126-256225
# UCNEs:1
UCNEs:NKX6-1_Hector;
Subcluster #6

Position:
Contig7201:12270-12496
# UCNEs:1
UCNEs:NKX6-1_Achilles;
Subcluster #7

Position:
Contig8204:18780-19006
# UCNEs:1
UCNEs:NKX6-1_Apollo;
Zebra_finch (taeGut1):
Subcluster #1

Position:
chr4:7662070-7928840
# UCNEs:19
UCNEs:NKX6-1_Achilles; NKX6-1_Apollo; NKX6-1_Ava; NKX6-1_Bryan; NKX6-1_Chen; NKX6-1_Delphina; NKX6-1_Franz; NKX6-1_Hector; NKX6-1_Joshua; NKX6-1_Laura; NKX6-1_Leo; NKX6-1_Lucifer; NKX6-1_Mateo; NKX6-1_Ophelia; NKX6-1_Prometheus; NKX6-1_Siddhartha; NKX6-1_Tarzan; NKX6-1_Traviata; NKX6-1_Vivien;
Lizard (anoCar2):
Subcluster #1

Position:
chr5:43442018-43799310
# UCNEs:18
UCNEs:NKX6-1_Achilles; NKX6-1_Apollo; NKX6-1_Ava; NKX6-1_Chen; NKX6-1_Delphina; NKX6-1_Franz; NKX6-1_Hector; NKX6-1_Joshua; NKX6-1_Laura; NKX6-1_Leo; NKX6-1_Lucifer; NKX6-1_Mateo; NKX6-1_Ophelia; NKX6-1_Prometheus; NKX6-1_Siddhartha; NKX6-1_Tarzan; NKX6-1_Traviata; NKX6-1_Vivien;
Painted_turtle (chrPic1):
Subcluster #1

Position:
JH584595:4090284-4500084
# UCNEs:19
UCNEs:NKX6-1_Achilles; NKX6-1_Apollo; NKX6-1_Ava; NKX6-1_Bryan; NKX6-1_Chen; NKX6-1_Delphina; NKX6-1_Franz; NKX6-1_Hector; NKX6-1_Joshua; NKX6-1_Laura; NKX6-1_Leo; NKX6-1_Lucifer; NKX6-1_Mateo; NKX6-1_Ophelia; NKX6-1_Prometheus; NKX6-1_Siddhartha; NKX6-1_Tarzan; NKX6-1_Traviata; NKX6-1_Vivien;
Xenopus (xenTro3):
Subcluster #1

Position:
GL172959:302386-587726
# UCNEs:12
UCNEs:NKX6-1_Hector; NKX6-1_Joshua; NKX6-1_Laura; NKX6-1_Leo; NKX6-1_Lucifer; NKX6-1_Mateo; NKX6-1_Ophelia; NKX6-1_Prometheus; NKX6-1_Siddhartha; NKX6-1_Tarzan; NKX6-1_Traviata; NKX6-1_Vivien;
Subcluster #2

Position:
GL173141:489975-669044
# UCNEs:7
UCNEs:NKX6-1_Achilles; NKX6-1_Apollo; NKX6-1_Ava; NKX6-1_Bryan; NKX6-1_Chen; NKX6-1_Delphina; NKX6-1_Franz;
Fugu (fr2):
Subcluster #1

Position:
chrUn:75303588-75372205
# UCNEs:15
UCNEs:NKX6-1_Achilles; NKX6-1_Apollo; NKX6-1_Ava; NKX6-1_Bryan; NKX6-1_Chen; NKX6-1_Delphina; NKX6-1_Franz; NKX6-1_Joshua; NKX6-1_Laura; NKX6-1_Lucifer; NKX6-1_Mateo; NKX6-1_Prometheus; NKX6-1_Siddhartha; NKX6-1_Tarzan; NKX6-1_Vivien;
Medaka (oryLat2):
Subcluster #1

Position:
chr12:24653171-24653311
# UCNEs:1
UCNEs:NKX6-1_Ava;
Subcluster #2

Position:
scaffold1704:305-514
# UCNEs:1
UCNEs:NKX6-1_Delphina;
Subcluster #3

Position:
scaffold2315:6222-6325
# UCNEs:1
UCNEs:NKX6-1_Joshua;
Subcluster #4

Position:
scaffold3168:2539-2747
# UCNEs:1
UCNEs:NKX6-1_Mateo;
Subcluster #5

Position:
scaffold3981:245-3160
# UCNEs:2
UCNEs:NKX6-1_Achilles; NKX6-1_Apollo;
Subcluster #6

Position:
scaffold5154:4332-4473
# UCNEs:1
UCNEs:NKX6-1_Tarzan;
Stickleback (gasAcu1):
Subcluster #1

Position:
chrUn:45244108-45244226
# UCNEs:1
UCNEs:NKX6-1_Achilles;
Tetraodon (tetNig2):
Subcluster #1

Position:
chr4:2955483-3010116
# UCNEs:14
UCNEs:NKX6-1_Achilles; NKX6-1_Apollo; NKX6-1_Ava; NKX6-1_Bryan; NKX6-1_Chen; NKX6-1_Delphina; NKX6-1_Joshua; NKX6-1_Laura; NKX6-1_Lucifer; NKX6-1_Mateo; NKX6-1_Prometheus; NKX6-1_Siddhartha; NKX6-1_Tarzan; NKX6-1_Vivien;
Zebrafish (danRer7):
Subcluster #1

Position:
chr21:17918334-18106326
# UCNEs:17
UCNEs:NKX6-1_Achilles; NKX6-1_Apollo; NKX6-1_Ava; NKX6-1_Bryan; NKX6-1_Chen; NKX6-1_Delphina; NKX6-1_Hector; NKX6-1_Joshua; NKX6-1_Laura; NKX6-1_Leo; NKX6-1_Lucifer; NKX6-1_Mateo; NKX6-1_Prometheus; NKX6-1_Siddhartha; NKX6-1_Tarzan; NKX6-1_Traviata; NKX6-1_Vivien;