Ultraconserved Genomic Regulatory Block: PTBP2_cluster
(id = 44)

General information about the entry
Representative name:PTBP2_cluster
Position:chr1:95777325-98303133
# UCNEs:21
Assiciated genes:DPYD; FLJ31662; PTBP2; RWDD3;
Possible target genes:PTBP2;
UCNEs forming the cluster:PTBP2_Achilles; PTBP2_Adela; PTBP2_Agamemnon; PTBP2_Alexander; PTBP2_Brooklyn; PTBP2_Carmen; PTBP2_Dominica; PTBP2_Faust; PTBP2_Flora; PTBP2_Franz; PTBP2_Gabriel; PTBP2_Hamlet; PTBP2_Kazuki; PTBP2_Logan; PTBP2_Mateo; PTBP2_Nemo; PTBP2_Noah; PTBP2_Penelope; PTBP2_Roxane; PTBP2_Ruby; PTBP2_Theodore;
Paralogous cluster(s):

View cluster image
Conservation in chicken:
Chicken (galGal3): Position: chr8:13990697-13297592
Associated genes: HCCS; MIR137;
Conservation in other species:
Mouse (mm10):
Subcluster #1

Position:

chr3:118659230-121102450
# UCNEs:21
UCNEs:PTBP2_Achilles; PTBP2_Adela; PTBP2_Agamemnon; PTBP2_Alexander; PTBP2_Brooklyn; PTBP2_Carmen; PTBP2_Dominica; PTBP2_Faust; PTBP2_Flora; PTBP2_Franz; PTBP2_Gabriel; PTBP2_Hamlet; PTBP2_Kazuki; PTBP2_Logan; PTBP2_Mateo; PTBP2_Nemo; PTBP2_Noah; PTBP2_Penelope; PTBP2_Roxane; PTBP2_Ruby; PTBP2_Theodore;


Opossum (monDom5):
Subcluster #1

Position:

chr2:460488765-460673816
# UCNEs:3
UCNEs:PTBP2_Achilles; PTBP2_Adela; PTBP2_Agamemnon;
Subcluster #2

Position:

chr2:461196916-461499186
# UCNEs:5
UCNEs:PTBP2_Alexander; PTBP2_Brooklyn; PTBP2_Carmen; PTBP2_Dominica; PTBP2_Faust;
Subcluster #3

Position:

chr2:462054852-463665768
# UCNEs:13
UCNEs:PTBP2_Flora; PTBP2_Franz; PTBP2_Gabriel; PTBP2_Hamlet; PTBP2_Kazuki; PTBP2_Logan; PTBP2_Mateo; PTBP2_Nemo; PTBP2_Noah; PTBP2_Penelope; PTBP2_Roxane; PTBP2_Ruby; PTBP2_Theodore;


Platypus (ornAna1):
Subcluster #1

Position:

chr4:50793984-52379481
# UCNEs:15
UCNEs:PTBP2_Alexander; PTBP2_Brooklyn; PTBP2_Carmen; PTBP2_Dominica; PTBP2_Faust; PTBP2_Franz; PTBP2_Gabriel; PTBP2_Hamlet; PTBP2_Kazuki; PTBP2_Logan; PTBP2_Noah; PTBP2_Penelope; PTBP2_Roxane; PTBP2_Ruby; PTBP2_Theodore;
Subcluster #2

Position:

Contig10758:1348-2338
# UCNEs:2
UCNEs:PTBP2_Mateo; PTBP2_Nemo;
Subcluster #3

Position:

Contig1350:48648-108051
# UCNEs:2
UCNEs:PTBP2_Adela; PTBP2_Agamemnon;
Subcluster #4

Position:

Contig17004:2667-2877
# UCNEs:1
UCNEs:PTBP2_Flora;
Subcluster #5

Position:

Contig52810:772-1114
# UCNEs:1
UCNEs:PTBP2_Achilles;


Zebra_finch (taeGut1):
Subcluster #1

Position:

chr8:8882550-9634698
# UCNEs:21
UCNEs:PTBP2_Achilles; PTBP2_Adela; PTBP2_Agamemnon; PTBP2_Alexander; PTBP2_Brooklyn; PTBP2_Carmen; PTBP2_Dominica; PTBP2_Faust; PTBP2_Flora; PTBP2_Franz; PTBP2_Gabriel; PTBP2_Hamlet; PTBP2_Kazuki; PTBP2_Logan; PTBP2_Mateo; PTBP2_Nemo; PTBP2_Noah; PTBP2_Penelope; PTBP2_Roxane; PTBP2_Ruby; PTBP2_Theodore;


Lizard (anoCar2):
Subcluster #1

Position:

chr4:89630213-89913121
# UCNEs:4
UCNEs:PTBP2_Achilles; PTBP2_Adela; PTBP2_Agamemnon; PTBP2_Alexander;
Subcluster #2

Position:

chr4:90785936-92075028
# UCNEs:17
UCNEs:PTBP2_Brooklyn; PTBP2_Carmen; PTBP2_Dominica; PTBP2_Faust; PTBP2_Flora; PTBP2_Franz; PTBP2_Gabriel; PTBP2_Hamlet; PTBP2_Kazuki; PTBP2_Logan; PTBP2_Mateo; PTBP2_Nemo; PTBP2_Noah; PTBP2_Penelope; PTBP2_Roxane; PTBP2_Ruby; PTBP2_Theodore;


Painted_turtle (chrPic1):
Subcluster #1

Position:

JH584718:5967727-6175274
# UCNEs:3
UCNEs:PTBP2_Roxane; PTBP2_Ruby; PTBP2_Theodore;
Subcluster #2

Position:

JH584838:540688-1249404
# UCNEs:11
UCNEs:PTBP2_Achilles; PTBP2_Adela; PTBP2_Agamemnon; PTBP2_Alexander; PTBP2_Brooklyn; PTBP2_Dominica; PTBP2_Faust; PTBP2_Flora; PTBP2_Franz; PTBP2_Gabriel; PTBP2_Hamlet;
Subcluster #3

Position:

JH584953:136272-279371
# UCNEs:5
UCNEs:PTBP2_Kazuki; PTBP2_Logan; PTBP2_Mateo; PTBP2_Nemo; PTBP2_Noah;
Subcluster #4

Position:

JH585618:57521-57736
# UCNEs:1
UCNEs:PTBP2_Penelope;


Xenopus (xenTro3):
Subcluster #1

Position:

GL172706:205104-1029956
# UCNEs:16
UCNEs:PTBP2_Achilles; PTBP2_Agamemnon; PTBP2_Brooklyn; PTBP2_Dominica; PTBP2_Faust; PTBP2_Franz; PTBP2_Gabriel; PTBP2_Hamlet; PTBP2_Kazuki; PTBP2_Logan; PTBP2_Mateo; PTBP2_Nemo; PTBP2_Noah; PTBP2_Penelope; PTBP2_Roxane; PTBP2_Ruby;
Subcluster #2

Position:

GL187055:5301-5594
# UCNEs:1
UCNEs:PTBP2_Theodore;


Fugu (fr2):
Subcluster #1

Position:

chrUn:369815784-369815912
# UCNEs:1
UCNEs:PTBP2_Franz;


Medaka (oryLat2):
Subcluster #1

Position:

ultracontig236:243990-244095
# UCNEs:1
UCNEs:PTBP2_Franz;


Stickleback (gasAcu1):
Subcluster #1

Position:

chrUn:6435441-6529797
# UCNEs:3
UCNEs:PTBP2_Franz; PTBP2_Hamlet; PTBP2_Kazuki;


Tetraodon (tetNig2):
Subcluster #1

Position:

chrUn_random:10080360-10080487
# UCNEs:1
UCNEs:PTBP2_Franz;


Zebrafish (danRer7):
Subcluster #1

Position:

chr2:17989041-18279338
# UCNEs:3
UCNEs:PTBP2_Franz; PTBP2_Hamlet; PTBP2_Ruby;
Subcluster #2

Position:

chr24:31567679-32405289
# UCNEs:6
UCNEs:PTBP2_Brooklyn; PTBP2_Franz; PTBP2_Hamlet; PTBP2_Logan; PTBP2_Mateo; PTBP2_Ruby;