Ultraconserved Genomic Regulatory Block: PTPRD_cluster
(id = 576)

General information about the entry
Representative name:PTPRD_cluster
Position:chr9:8095704-8526809
# UCNEs:3
Assiciated genes:C9orf123; PTPRD;
Possible target genes:PTPRD;
UCNEs forming the cluster:PTPRD_Aladdin; PTPRD_Hana; PTPRD_Leopold;
Paralogous cluster(s):

View cluster image
Conservation in chicken:
Chicken (galGal3): Position: chrZ:29211697-29421186
Associated genes: GLDC; TYRP1;
Conservation in other species:
Mouse (mm10):
Subcluster #1

Position:

chr4:75700943-76138737
# UCNEs:3
UCNEs:PTPRD_Aladdin; PTPRD_Hana; PTPRD_Leopold;


Opossum (monDom5):
Subcluster #1

Position:

chr6:170029057-170029318
# UCNEs:1
UCNEs:PTPRD_Aladdin;
Subcluster #2

Position:

chr6:170576886-170580308
# UCNEs:2
UCNEs:PTPRD_Hana; PTPRD_Leopold;


Platypus (ornAna1):
Subcluster #1

Position:

chrX5:12138614-12425261
# UCNEs:3
UCNEs:PTPRD_Aladdin; PTPRD_Hana; PTPRD_Leopold;


Zebra_finch (taeGut1):
Subcluster #1

Position:

chrZ:62706873-62937113
# UCNEs:3
UCNEs:PTPRD_Aladdin; PTPRD_Hana; PTPRD_Leopold;


Lizard (anoCar2):
Subcluster #1

Position:

chr2:53542363-53850526
# UCNEs:3
UCNEs:PTPRD_Aladdin; PTPRD_Hana; PTPRD_Leopold;


Painted_turtle (chrPic1):
Subcluster #1

Position:

JH584653:6139943-6479172
# UCNEs:3
UCNEs:PTPRD_Aladdin; PTPRD_Hana; PTPRD_Leopold;


Xenopus (xenTro3):
Subcluster #1

Position:

GL172722:1282396-1406191
# UCNEs:3
UCNEs:PTPRD_Aladdin; PTPRD_Hana; PTPRD_Leopold;


Fugu (fr2):
Subcluster #1

Position:

chrUn:102839115-102839326
# UCNEs:1
UCNEs:PTPRD_Hana;
Subcluster #2

Position:

chrUn:209437959-209438166
# UCNEs:1
UCNEs:PTPRD_Leopold;
Subcluster #3

Position:

chrUn:247954850-247954938
# UCNEs:1
UCNEs:PTPRD_Hana;


Medaka (oryLat2):
Subcluster #1

Position:

chr18:9386929-9390877
# UCNEs:2
UCNEs:PTPRD_Hana; PTPRD_Leopold;


Stickleback (gasAcu1):
Subcluster #1

Position:

chrVII:5897835-5901138
# UCNEs:2
UCNEs:PTPRD_Hana; PTPRD_Leopold;


Tetraodon (tetNig2):
Subcluster #1

Position:

chr15:4585053-4585239
# UCNEs:1
UCNEs:PTPRD_Hana;
Subcluster #2

Position:

chrUn_random:11786736-11797803
# UCNEs:2
UCNEs:PTPRD_Hana; PTPRD_Leopold;


Zebrafish (danRer7):
Subcluster #1

Position:

chr22:3479574-3479770
# UCNEs:1
UCNEs:PTPRD_Hana;
Subcluster #2

Position:

chr7:76959895-76964764
# UCNEs:2
UCNEs:PTPRD_Hana; PTPRD_Leopold;