Ultraconserved Genomic Regulatory Block: LHX1_cluster
(id = 229)

General information about the entry
Representative name:LHX1_cluster
Position:chr17:35012232-35590289
# UCNEs:17
Assiciated genes:AATF; ACACA; LHX1; MIR2909; MRM1;
Possible target genes:LHX1;
UCNEs forming the cluster:LHX1_Alice; LHX1_Ariel; LHX1_Arthur; LHX1_Claudia; LHX1_Frederica; LHX1_Juan; LHX1_Kazuki; LHX1_Laura; LHX1_Lolita; LHX1_Lucia; LHX1_Lukas; LHX1_Ming; LHX1_Roxane; LHX1_Trevor; LHX1_Victor; LHX1_Violet; LHX1_Vivien;
Paralogous cluster(s):LHX2_cluster;

View cluster image
Conservation in chicken:
Chicken (galGal3): Position: chr19:8170720-8472683
Associated genes: AATF; ACACA; DHRS11; LHX1;
Conservation in other species:
Mouse (mm10):
Subcluster #1

Position:
chr11:84271978-84766400
# UCNEs:17
UCNEs:LHX1_Alice; LHX1_Ariel; LHX1_Arthur; LHX1_Claudia; LHX1_Frederica; LHX1_Juan; LHX1_Kazuki; LHX1_Laura; LHX1_Lolita; LHX1_Lucia; LHX1_Lukas; LHX1_Ming; LHX1_Roxane; LHX1_Trevor; LHX1_Victor; LHX1_Violet; LHX1_Vivien;
Opossum (monDom5):
Subcluster #1

Position:
chr2:185325405-186115926
# UCNEs:17
UCNEs:LHX1_Alice; LHX1_Ariel; LHX1_Arthur; LHX1_Claudia; LHX1_Frederica; LHX1_Juan; LHX1_Kazuki; LHX1_Laura; LHX1_Lolita; LHX1_Lucia; LHX1_Lukas; LHX1_Ming; LHX1_Roxane; LHX1_Trevor; LHX1_Victor; LHX1_Violet; LHX1_Vivien;
Platypus (ornAna1):
Subcluster #1

Position:
Contig17672:8472-8712
# UCNEs:1
UCNEs:LHX1_Ariel;
Subcluster #2

Position:
Ultra9:692039-1235854
# UCNEs:16
UCNEs:LHX1_Alice; LHX1_Arthur; LHX1_Claudia; LHX1_Frederica; LHX1_Juan; LHX1_Kazuki; LHX1_Laura; LHX1_Lolita; LHX1_Lucia; LHX1_Lukas; LHX1_Ming; LHX1_Roxane; LHX1_Trevor; LHX1_Victor; LHX1_Violet; LHX1_Vivien;
Zebra_finch (taeGut1):
Subcluster #1

Position:
chr19:9932644-10230212
# UCNEs:14
UCNEs:LHX1_Alice; LHX1_Ariel; LHX1_Claudia; LHX1_Frederica; LHX1_Juan; LHX1_Kazuki; LHX1_Lucia; LHX1_Lukas; LHX1_Ming; LHX1_Roxane; LHX1_Trevor; LHX1_Victor; LHX1_Violet; LHX1_Vivien;
Subcluster #2

Position:
chr19_random:126665-126942
# UCNEs:1
UCNEs:LHX1_Arthur;
Subcluster #3

Position:
chrZ:67897149-67902473
# UCNEs:2
UCNEs:LHX1_Laura; LHX1_Lolita;
Lizard (anoCar2):
Subcluster #1

Position:
chrUn_GL343439:135651-717498
# UCNEs:17
UCNEs:LHX1_Alice; LHX1_Ariel; LHX1_Arthur; LHX1_Claudia; LHX1_Frederica; LHX1_Juan; LHX1_Kazuki; LHX1_Laura; LHX1_Lolita; LHX1_Lucia; LHX1_Lukas; LHX1_Ming; LHX1_Roxane; LHX1_Trevor; LHX1_Victor; LHX1_Violet; LHX1_Vivien;
Painted_turtle (chrPic1):
Subcluster #1

Position:
JH584693:2515282-3283485
# UCNEs:14
UCNEs:LHX1_Alice; LHX1_Ariel; LHX1_Claudia; LHX1_Juan; LHX1_Kazuki; LHX1_Lolita; LHX1_Lucia; LHX1_Lukas; LHX1_Ming; LHX1_Roxane; LHX1_Trevor; LHX1_Victor; LHX1_Violet; LHX1_Vivien;
Xenopus (xenTro3):
Subcluster #1

Position:
GL173148:38182-38413
# UCNEs:1
UCNEs:LHX1_Ariel;
Subcluster #2

Position:
GL173152:245929-842808
# UCNEs:13
UCNEs:LHX1_Arthur; LHX1_Claudia; LHX1_Frederica; LHX1_Juan; LHX1_Kazuki; LHX1_Laura; LHX1_Lolita; LHX1_Lukas; LHX1_Ming; LHX1_Roxane; LHX1_Trevor; LHX1_Violet; LHX1_Vivien;
Fugu (fr2):
Subcluster #1

Position:
chrUn:24074558-24082901
# UCNEs:2
UCNEs:LHX1_Juan; LHX1_Lolita;
Subcluster #2

Position:
chrUn:308860884-308957652
# UCNEs:6
UCNEs:LHX1_Ariel; LHX1_Arthur; LHX1_Frederica; LHX1_Juan; LHX1_Kazuki; LHX1_Laura;
Subcluster #3

Position:
chrUn:358323463-358323671
# UCNEs:1
UCNEs:LHX1_Ming;
Medaka (oryLat2):
Subcluster #1

Position:
chr13:29107967-29306684
# UCNEs:5
UCNEs:LHX1_Claudia; LHX1_Frederica; LHX1_Juan; LHX1_Kazuki; LHX1_Laura;
Subcluster #2

Position:
chr14:18214999-18223356
# UCNEs:2
UCNEs:LHX1_Juan; LHX1_Lolita;
Subcluster #3

Position:
scaffold2961:4749-4948
# UCNEs:1
UCNEs:LHX1_Ming;
Subcluster #4

Position:
scaffold3713:5965-6240
# UCNEs:1
UCNEs:LHX1_Arthur;
Subcluster #5

Position:
scaffold4407:4062-4203
# UCNEs:1
UCNEs:LHX1_Lolita;
Stickleback (gasAcu1):
Subcluster #1

Position:
chrI:18947689-19266814
# UCNEs:8
UCNEs:LHX1_Arthur; LHX1_Claudia; LHX1_Frederica; LHX1_Juan; LHX1_Kazuki; LHX1_Laura; LHX1_Lolita; LHX1_Ming;
Subcluster #2

Position:
chrVII:16325142-16336099
# UCNEs:2
UCNEs:LHX1_Juan; LHX1_Lolita;
Tetraodon (tetNig2):
Subcluster #1

Position:
chr16:8741544-8852412
# UCNEs:9
UCNEs:LHX1_Ariel; LHX1_Arthur; LHX1_Claudia; LHX1_Frederica; LHX1_Juan; LHX1_Kazuki; LHX1_Laura; LHX1_Lolita; LHX1_Ming;
Subcluster #2

Position:
chr7:6903769-6912069
# UCNEs:2
UCNEs:LHX1_Juan; LHX1_Lolita;
Zebrafish (danRer7):
Subcluster #1

Position:
chr15:26882303-27301709
# UCNEs:11
UCNEs:LHX1_Ariel; LHX1_Arthur; LHX1_Claudia; LHX1_Frederica; LHX1_Juan; LHX1_Kazuki; LHX1_Laura; LHX1_Lolita; LHX1_Lucia; LHX1_Ming; LHX1_Vivien;
Subcluster #2

Position:
chr5:57694230-57694418
# UCNEs:1
UCNEs:LHX1_Lolita;