Ultraconserved Genomic Regulatory Block: SOX5_cluster
(id = 113)

General information about the entry
Representative name:SOX5_cluster
Position:chr12:22920003-24691414
# UCNEs:26
Assiciated genes:ETNK1; MIR920; SOX5;
Possible target genes:SOX5;
UCNEs forming the cluster:SOX5_Alice; SOX5_Ava; SOX5_Cameron; SOX5_Chao; SOX5_Eduardo; SOX5_Elvira; SOX5_Flora; SOX5_Hamlet; SOX5_Hana; SOX5_Haruki; SOX5_Hong; SOX5_Jacob; SOX5_Jan; SOX5_Leo; SOX5_Logan; SOX5_Malcolm; SOX5_Mateo; SOX5_Midori; SOX5_Ophelia; SOX5_Ryan; SOX5_Sam; SOX5_Santiago; SOX5_Scheherazade; SOX5_Theodore; SOX5_Virginia; SOX5_Wei;
Paralogous cluster(s):SOX6_cluster;

View cluster image
Conservation in chicken:
Chicken (galGal3): Position: chr1:68592792-67700958
Associated genes: SOX5; ST8SIA1;
Conservation in other species:
Mouse (mm10):
Subcluster #1

Position:
chr6:143260703-144754208
# UCNEs:26
UCNEs:SOX5_Alice; SOX5_Ava; SOX5_Cameron; SOX5_Chao; SOX5_Eduardo; SOX5_Elvira; SOX5_Flora; SOX5_Hamlet; SOX5_Hana; SOX5_Haruki; SOX5_Hong; SOX5_Jacob; SOX5_Jan; SOX5_Leo; SOX5_Logan; SOX5_Malcolm; SOX5_Mateo; SOX5_Midori; SOX5_Ophelia; SOX5_Ryan; SOX5_Sam; SOX5_Santiago; SOX5_Scheherazade; SOX5_Theodore; SOX5_Virginia; SOX5_Wei;
Opossum (monDom5):
Subcluster #1

Position:
chr8:94122967-96281792
# UCNEs:26
UCNEs:SOX5_Alice; SOX5_Ava; SOX5_Cameron; SOX5_Chao; SOX5_Eduardo; SOX5_Elvira; SOX5_Flora; SOX5_Hamlet; SOX5_Hana; SOX5_Haruki; SOX5_Hong; SOX5_Jacob; SOX5_Jan; SOX5_Leo; SOX5_Logan; SOX5_Malcolm; SOX5_Mateo; SOX5_Midori; SOX5_Ophelia; SOX5_Ryan; SOX5_Sam; SOX5_Santiago; SOX5_Scheherazade; SOX5_Theodore; SOX5_Virginia; SOX5_Wei;
Platypus (ornAna1):
Subcluster #1

Position:
Contig10150:16629-16944
# UCNEs:1
UCNEs:SOX5_Chao;
Subcluster #2

Position:
Contig12804:16026-16493
# UCNEs:1
UCNEs:SOX5_Alice;
Subcluster #3

Position:
Contig17553:5397-5707
# UCNEs:1
UCNEs:SOX5_Ava;
Subcluster #4

Position:
Contig3614:20933-21394
# UCNEs:1
UCNEs:SOX5_Ophelia;
Subcluster #5

Position:
Contig7213:3877-4301
# UCNEs:1
UCNEs:SOX5_Eduardo;
Subcluster #6

Position:
Contig72563:2943-3187
# UCNEs:1
UCNEs:SOX5_Hong;
Subcluster #7

Position:
Contig7360:8612-9036
# UCNEs:1
UCNEs:SOX5_Cameron;
Subcluster #8

Position:
Ultra343:20693-507011
# UCNEs:7
UCNEs:SOX5_Ryan; SOX5_Sam; SOX5_Santiago; SOX5_Scheherazade; SOX5_Theodore; SOX5_Virginia; SOX5_Wei;
Subcluster #9

Position:
Ultra90:6042-590302
# UCNEs:12
UCNEs:SOX5_Elvira; SOX5_Flora; SOX5_Hamlet; SOX5_Hana; SOX5_Haruki; SOX5_Jacob; SOX5_Jan; SOX5_Leo; SOX5_Logan; SOX5_Malcolm; SOX5_Mateo; SOX5_Midori;
Zebra_finch (taeGut1):
Subcluster #1

Position:
chr1A:59963322-60786752
# UCNEs:26
UCNEs:SOX5_Alice; SOX5_Ava; SOX5_Cameron; SOX5_Chao; SOX5_Eduardo; SOX5_Elvira; SOX5_Flora; SOX5_Hamlet; SOX5_Hana; SOX5_Haruki; SOX5_Hong; SOX5_Jacob; SOX5_Jan; SOX5_Leo; SOX5_Logan; SOX5_Malcolm; SOX5_Mateo; SOX5_Midori; SOX5_Ophelia; SOX5_Ryan; SOX5_Sam; SOX5_Santiago; SOX5_Scheherazade; SOX5_Theodore; SOX5_Virginia; SOX5_Wei;
Lizard (anoCar2):
Subcluster #1

Position:
chr5:6913132-8004209
# UCNEs:25
UCNEs:SOX5_Alice; SOX5_Ava; SOX5_Cameron; SOX5_Eduardo; SOX5_Elvira; SOX5_Flora; SOX5_Hamlet; SOX5_Hana; SOX5_Haruki; SOX5_Hong; SOX5_Jacob; SOX5_Jan; SOX5_Leo; SOX5_Logan; SOX5_Malcolm; SOX5_Mateo; SOX5_Midori; SOX5_Ophelia; SOX5_Ryan; SOX5_Sam; SOX5_Santiago; SOX5_Scheherazade; SOX5_Theodore; SOX5_Virginia; SOX5_Wei;
Painted_turtle (chrPic1):
Subcluster #1

Position:
JH584680:3017630-4295457
# UCNEs:24
UCNEs:SOX5_Alice; SOX5_Ava; SOX5_Cameron; SOX5_Chao; SOX5_Eduardo; SOX5_Elvira; SOX5_Flora; SOX5_Hamlet; SOX5_Hana; SOX5_Haruki; SOX5_Hong; SOX5_Jacob; SOX5_Leo; SOX5_Logan; SOX5_Malcolm; SOX5_Mateo; SOX5_Midori; SOX5_Ophelia; SOX5_Ryan; SOX5_Sam; SOX5_Santiago; SOX5_Scheherazade; SOX5_Virginia; SOX5_Wei;
Xenopus (xenTro3):
Subcluster #1

Position:
GL173556:130774-131298
# UCNEs:1
UCNEs:SOX5_Ryan;
Subcluster #2

Position:
GL173761:41005-258122
# UCNEs:11
UCNEs:SOX5_Cameron; SOX5_Eduardo; SOX5_Elvira; SOX5_Flora; SOX5_Hamlet; SOX5_Hana; SOX5_Haruki; SOX5_Jacob; SOX5_Jan; SOX5_Mateo; SOX5_Midori;
Subcluster #3

Position:
GL173838:17233-17515
# UCNEs:1
UCNEs:SOX5_Santiago;
Subcluster #4

Position:
GL174605:9017-9281
# UCNEs:1
UCNEs:SOX5_Malcolm;
Subcluster #5

Position:
GL175968:3932-4030
# UCNEs:1
UCNEs:SOX5_Theodore;
Fugu (fr2):
Subcluster #1

Position:
chrUn:280824131-280945605
# UCNEs:6
UCNEs:SOX5_Elvira; SOX5_Hana; SOX5_Jan; SOX5_Mateo; SOX5_Ryan; SOX5_Scheherazade;
Medaka (oryLat2):
Subcluster #1

Position:
chr23:421383-714808
# UCNEs:7
UCNEs:SOX5_Elvira; SOX5_Flora; SOX5_Hana; SOX5_Jan; SOX5_Mateo; SOX5_Ryan; SOX5_Scheherazade;
Stickleback (gasAcu1):
Subcluster #1

Position:
chrIV:21305675-21452248
# UCNEs:6
UCNEs:SOX5_Elvira; SOX5_Flora; SOX5_Hana; SOX5_Mateo; SOX5_Ryan; SOX5_Scheherazade;
Tetraodon (tetNig2):
Subcluster #1

Position:
chr19:6103316-6228708
# UCNEs:7
UCNEs:SOX5_Elvira; SOX5_Flora; SOX5_Hana; SOX5_Jan; SOX5_Mateo; SOX5_Ryan; SOX5_Scheherazade;
Zebrafish (danRer7):
Subcluster #1

Position:
chr4:15983315-16239186
# UCNEs:10
UCNEs:SOX5_Alice; SOX5_Elvira; SOX5_Flora; SOX5_Hana; SOX5_Jan; SOX5_Mateo; SOX5_Midori; SOX5_Ryan; SOX5_Sam; SOX5_Scheherazade;