Ultraconserved Genomic Regulatory Block: SYNCRIP_cluster
(id = 480)

General information about the entry
Representative name:SYNCRIP_cluster
Position:chr6:85071180-86324122
# UCNEs:8
Assiciated genes:KIAA1009; NT5E; SNX14; SYNCRIP; TBX18;
Possible target genes:SYNCRIP;
UCNEs forming the cluster:SYNCRIP_Amos; SYNCRIP_Bryan; SYNCRIP_Carmen; SYNCRIP_Frankenstein; SYNCRIP_Hector; SYNCRIP_Prometheus; SYNCRIP_Sherlock; SYNCRIP_Wagner;
Paralogous cluster(s):

View cluster image
Conservation in chicken:
Chicken (galGal3): Position: chr3:80150068-79621489
Associated genes: SYNCRIP; TBX18;
Conservation in other species:
Mouse (mm10):
Subcluster #1

Position:

chr9:87376892-88455782
# UCNEs:8
UCNEs:SYNCRIP_Amos; SYNCRIP_Bryan; SYNCRIP_Carmen; SYNCRIP_Frankenstein; SYNCRIP_Hector; SYNCRIP_Prometheus; SYNCRIP_Sherlock; SYNCRIP_Wagner;


Opossum (monDom5):
Subcluster #1

Position:

chr2:340292220-341339822
# UCNEs:6
UCNEs:SYNCRIP_Amos; SYNCRIP_Bryan; SYNCRIP_Carmen; SYNCRIP_Frankenstein; SYNCRIP_Hector; SYNCRIP_Prometheus;
Subcluster #2

Position:

chr2:342039919-342042774
# UCNEs:2
UCNEs:SYNCRIP_Sherlock; SYNCRIP_Wagner;


Platypus (ornAna1):
Subcluster #1

Position:

Ultra42:115560-118415
# UCNEs:2
UCNEs:SYNCRIP_Sherlock; SYNCRIP_Wagner;
Subcluster #2

Position:

Ultra483:5113613-5533765
# UCNEs:6
UCNEs:SYNCRIP_Amos; SYNCRIP_Bryan; SYNCRIP_Carmen; SYNCRIP_Frankenstein; SYNCRIP_Hector; SYNCRIP_Prometheus;


Zebra_finch (taeGut1):
Subcluster #1

Position:

chr3:79238854-79725925
# UCNEs:7
UCNEs:SYNCRIP_Amos; SYNCRIP_Bryan; SYNCRIP_Frankenstein; SYNCRIP_Hector; SYNCRIP_Prometheus; SYNCRIP_Sherlock; SYNCRIP_Wagner;
Subcluster #2

Position:

chr3_random:1155919-1156235
# UCNEs:1
UCNEs:SYNCRIP_Carmen;


Lizard (anoCar2):
Subcluster #1

Position:

chr1:176830217-176832735
# UCNEs:2
UCNEs:SYNCRIP_Sherlock; SYNCRIP_Wagner;
Subcluster #2

Position:

chr1:196653838-197093524
# UCNEs:6
UCNEs:SYNCRIP_Amos; SYNCRIP_Bryan; SYNCRIP_Carmen; SYNCRIP_Frankenstein; SYNCRIP_Hector; SYNCRIP_Prometheus;


Painted_turtle (chrPic1):
Subcluster #1

Position:

JH584702:179663-182521
# UCNEs:2
UCNEs:SYNCRIP_Sherlock; SYNCRIP_Wagner;
Subcluster #2

Position:

JH584952:149980-645899
# UCNEs:6
UCNEs:SYNCRIP_Amos; SYNCRIP_Bryan; SYNCRIP_Carmen; SYNCRIP_Frankenstein; SYNCRIP_Hector; SYNCRIP_Prometheus;


Xenopus (xenTro3):
Subcluster #1

Position:

GL172712:272249-723306
# UCNEs:7
UCNEs:SYNCRIP_Amos; SYNCRIP_Bryan; SYNCRIP_Carmen; SYNCRIP_Frankenstein; SYNCRIP_Hector; SYNCRIP_Prometheus; SYNCRIP_Sherlock;


Fugu (fr2):
Subcluster #1

Position:

chrUn:36311276-36311666
# UCNEs:1
UCNEs:SYNCRIP_Sherlock;


Medaka (oryLat2):
Subcluster #1

Position:

chr22:9763930-9764359
# UCNEs:1
UCNEs:SYNCRIP_Sherlock;
Subcluster #2

Position:

chr24:2671371-2674592
# UCNEs:2
UCNEs:SYNCRIP_Hector; SYNCRIP_Prometheus;


Stickleback (gasAcu1):
Subcluster #1

Position:

chrXV:6915550-6916042
# UCNEs:1
UCNEs:SYNCRIP_Sherlock;
Subcluster #2

Position:

chrXVIII:2752876-2760407
# UCNEs:2
UCNEs:SYNCRIP_Hector; SYNCRIP_Prometheus;


Tetraodon (tetNig2):
Subcluster #1

Position:

chr10:7003551-7003991
# UCNEs:1
UCNEs:SYNCRIP_Sherlock;


Zebrafish (danRer7):
Subcluster #1

Position:

chr17:50815331-50815861
# UCNEs:1
UCNEs:SYNCRIP_Sherlock;
Subcluster #2

Position:

chr23:31315259-31442593
# UCNEs:3
UCNEs:SYNCRIP_Bryan; SYNCRIP_Carmen; SYNCRIP_Hector;