General information about the entry |
Entry location: | intron |
Position: | chr14:33194425-33194677  |
Length: | 253 nt |
Sequence: | NPAS3_Apollo.fasta |
Overlapping gene: | AKAP6 |
Paralogs: | |
Ultraconserved Genomic Regulatory Block (UGRB): |
NPAS3_cluster: chr14:33068679-34779105  |
External links: |
CONDOR database: | |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
|
Conservation in chicken: |
Chicken (galGal3): | Region: chr5:37344921-37345186        Identity: >95%
|
Conservation in other species: |
Mouse (mm10): | Region #1:   chr12:53061792-53062049   Identity: 97.29%
   E-value: 5.4e-66   Bit-score: 256.4 |
|
Armadillo (dasNov1): | Region #1:   scaffold_21628:38239-38487   Identity: 99.2%
   E-value: 9.1e-61   Bit-score: 239.2 |
|
Opossum (monDom5): | Region #1:   chr1:206214573-206214827   Identity: 97.25%
   E-value: 2e-57   Bit-score: 228.3 |
|
Platypus (ornAna1): | Region #1:   chr4:25015394-25015652   Identity: 94.98%
   E-value: 1.3e-60   Bit-score: 238 |
|
Zebra_finch (taeGut1): | Region #1:   chr5:34863408-34863656   Identity: 95.58%
   E-value: 9.4e-59   Bit-score: 231.2 |
This UCNE has 1 paralogous region in Zebra_finch
Paralog #1:   chrUn:70207746-70207994   Identity: 95.58%
   E-value: 9.4e-59   Bit-score: 231.2 |
|
|
Lizard (anoCar2): | Region #1:   chr2:56095244-56095483   Identity: 97.92%
   E-value: 4.9e-62   Bit-score: 242.6 |
|
Painted_turtle (chrPic1): | Region #1:   JH584491:1115844-1116090   Identity: 97.58%
   E-value: 5.8e-60   Bit-score: 236.3 |
|
Xenopus (xenTro3): |
|
Fugu (fr2): |
|
Medaka (oryLat2): |
|
Stickleback (gasAcu1): |
|
Tetraodon (tetNig2): |
|
Zebrafish (danRer7): |
|
Lamprey (petMar1): |
|
Ciona_intestinalis (ci2): |
|
Sea_urchin (strPur2): |
|
Lancelet (braFlo1): |
|