General information about the entry |
Entry location: | UTR |
Position: | chr14:33299680-33300002  |
Length: | 323 nt |
Sequence: | NPAS3_Claudia.fasta |
Overlapping gene: | AKAP6 |
Paralogs: | |
Ultraconserved Genomic Regulatory Block (UGRB): |
NPAS3_cluster: chr14:33068679-34779105  |
External links: |
CONDOR database: | |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
|
Conservation in chicken: |
Chicken (galGal3): | Region: chr5:37401861-37402185        Identity: >95%
|
Conservation in other species: |
Mouse (mm10): | Region #1:   chr12:53148428-53148740   Identity: 88.92%
   E-value: 1.5e-35   Bit-score: 155.6 |
|
Armadillo (dasNov1): |
|
Opossum (monDom5): | Region #1:   chr1:206090042-206090374   Identity: 93.69%
   E-value: 5.8e-36   Bit-score: 157.4 |
|
Platypus (ornAna1): | Region #1:   chr4:24945634-24945957   Identity: 95.37%
   E-value: 1.2e-50   Bit-score: 205.3 |
|
Zebra_finch (taeGut1): | Region #1:   chr5:34919582-34919906   Identity: 94.15%
   E-value: 3.1e-45   Bit-score: 186.7 |
This UCNE has 2 paralogous regions in Zebra_finch
Paralog #1:   chrUn:55564347-55564671   Identity: 94.15%
   E-value: 3.1e-45   Bit-score: 186.7 |
Paralog #2:   chr2:498537-498837   Identity: 71.76%
   E-value: 0.000000000000075   Bit-score: 82.4 |
|
|
Lizard (anoCar2): | Region #1:   chr2:56030770-56031097   Identity: 84.23%
   E-value: 1.1e-39   Bit-score: 168.7 |
|
Painted_turtle (chrPic1): | Region #1:   JH584491:1182806-1183122   Identity: 94.69%
   E-value: 1.5e-44   Bit-score: 185.5 |
|
Xenopus (xenTro3): |
|
Fugu (fr2): |
|
Medaka (oryLat2): |
|
Stickleback (gasAcu1): |
|
Tetraodon (tetNig2): |
|
Zebrafish (danRer7): |
|
Lamprey (petMar1): |
|
Ciona_intestinalis (ci2): |
|
Sea_urchin (strPur2): |
|
Lancelet (braFlo1): |
|