UCNE: PAX9_Charlie
(id = 12117)

General information about the entry
Entry location:intron
Position:chr14:36169319-36169609
Length:291 nt
Sequence:PAX9_Charlie.fasta
Overlapping gene:RALGAPA1
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): PAX9_cluster: chr14:35978979-37985423
External links:
CONDOR database:
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr5:38692941-38693230        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr12:55734986-55735272   Identity: 97.25%    E-value: 1e-49   Bit-score: 202.5

Armadillo (dasNov1):
Opossum (monDom5):
Region #1:   chr1:286225500-286225788   Identity: 96.89%    E-value: 5.5e-50   Bit-score: 203.8

Platypus (ornAna1):
Region #1:   chr4:23472653-23472940   Identity: 97.24%    E-value: 9.9e-57   Bit-score: 225.3

Zebra_finch (taeGut1):
Region #1:   chr5:36294750-36295036   Identity: 97.57%    E-value: 1.6e-56   Bit-score: 224

Lizard (anoCar2):
Region #1:   chr1:24116746-24117030   Identity: 97.57%    E-value: 8e-57   Bit-score: 225.5

Painted_turtle (chrPic1):
Region #1:   JH584837:2025930-2026222   Identity: 96.59%    E-value: 3.9e-59   Bit-score: 233.7

Xenopus (xenTro3):
Region #1:   GL172781:2011973-2012228   Identity: 73.66%    E-value: 9.5e-24   Bit-score: 115.4

Fugu (fr2):
Region #1:   chrUn:65872494-65872685   Identity: 61%    E-value: 0.00000076   Bit-score: 53.9

Medaka (oryLat2):
Region #1:   chr22:19318418-19318646   Identity: 61.6%    E-value: 0.00000017   Bit-score: 56.2
Region #2:   chr22:16399386-16399570   Identity: 61.58%    E-value: 0.00002   Bit-score: 49.3

Stickleback (gasAcu1):
Region #1:   chrXV:4027971-4028167   Identity: 61.31%    E-value: 0.00000071   Bit-score: 54.1
Region #2:   chrXV:13081083-13081245   Identity: 63.69%    E-value: 0.0000013   Bit-score: 53.3

Tetraodon (tetNig2):
Region #1:   chr10:3459082-3459247   Identity: 61.68%    E-value: 0.000034   Bit-score: 48.4

Zebrafish (danRer7):
Region #1:   chr17:12679929-12680125   Identity: 66.5%    E-value: 0.0000000000034   Bit-score: 72.6

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):