UCNE: VRK1_Jasmine
(id = 12869)

General information about the entry
Entry location:intergenic
Position:chr14:97431162-97431766
Length:605 nt
Sequence:VRK1_Jasmine.fasta
Upstream gene:VRK1
Downstream gene:C14orf64
Paralogs:chr2:58858122-58858390: BCL11A_Daniel;
Ultraconserved Genomic Regulatory Block (UGRB): VRK1_cluster: chr14:97033186-98101307
External links:
CONDOR database:CRCNE00004497; CRCNE00004496;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):uc.379 http://users.soe.ucsc.edu/~jill/ultra.html
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr5:49163407-49164012        Identity: >95%
This UCNE has 1 paralogous region in Chicken

Conservation in other species:
Mouse (mm10):
Region #1:   chr12:106129056-106129655   Identity: 97.67%    E-value: 4.6e-131   Bit-score: 473.8
This UCNE has 1 paralogous region in Mouse

Armadillo (dasNov1):
Region #1:   scaffold_271617:348-926   Identity: 98.1%    E-value: 4e-120   Bit-score: 437.6
This UCNE has 1 paralogous region in Armadillo

Opossum (monDom5):
Region #1:   chr1:324513610-324514211   Identity: 97.84%    E-value: 2.9e-123   Bit-score: 448.3
This UCNE has 1 paralogous region in Opossum

Platypus (ornAna1):
Region #1:   Ultra378:2894122-2894724   Identity: 97.51%    E-value: 1.8e-144   Bit-score: 517.9
This UCNE has 1 paralogous region in Platypus

Zebra_finch (taeGut1):
Region #1:   chr5:47833902-47834503   Identity: 98.67%    E-value: 2.5e-135   Bit-score: 486.9
This UCNE has 1 paralogous region in Zebra_finch

Lizard (anoCar2):
Region #1:   chr1:8197364-8197990   Identity: 93.78%    E-value: 4.8e-136   Bit-score: 489.7
This UCNE has 1 paralogous region in Lizard

Painted_turtle (chrPic1):
Region #1:   JH584822:1620543-1621144   Identity: 98.34%    E-value: 3.8e-137   Bit-score: 493.9

Xenopus (xenTro3):
Region #1:   GL172821:882612-883207   Identity: 91.5%    E-value: 2.9e-107   Bit-score: 393.9
This UCNE has 1 paralogous region in Xenopus

Fugu (fr2):
Region #1:   chrUn:316205658-316206270   Identity: 76.1%    E-value: 2.3e-91   Bit-score: 335.7
Region #2:   chrUn:240033330-240033617   Identity: 66.11%    E-value: 2.9e-21   Bit-score: 102.8
This UCNE has 2 paralogous regions in Fugu

Medaka (oryLat2):
Region #1:   chr22:3148800-3149433   Identity: 77.34%    E-value: 3e-93   Bit-score: 342.1
Region #2:   chr24:2756609-2756866   Identity: 66.92%    E-value: 8e-17   Bit-score: 88.2
This UCNE has 2 paralogous regions in Medaka

Stickleback (gasAcu1):
Region #1:   chrXV:14979469-14980092   Identity: 79.01%    E-value: 1.8e-101   Bit-score: 369.4
Region #2:   chrXVIII:2685382-2685668   Identity: 65.44%    E-value: 3.7e-18   Bit-score: 92.7
This UCNE has 2 paralogous regions in Stickleback

Tetraodon (tetNig2):
Region #1:   chrUn_random:59842318-59842913   Identity: 76.29%    E-value: 1.2e-90   Bit-score: 333.3
Region #2:   chr14:8194735-8195023   Identity: 65.89%    E-value: 5.1e-20   Bit-score: 98.7
This UCNE has 2 paralogous regions in Tetraodon

Zebrafish (danRer7):
Region #1:   chr17:18571704-18572314   Identity: 86.3%    E-value: 1.6e-100   Bit-score: 367
Region #2:   chr20:4728097-4728438   Identity: 71.59%    E-value: 7.3e-29   Bit-score: 129
This UCNE has 2 paralogous regions in Zebrafish

Lamprey (petMar1):
This UCNE has 2 paralogous regions in Lamprey

Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):