General information about the entry |
Entry location: | UTR |
Position: | chr15:57580145-57580603  |
Length: | 459 nt |
Sequence: | TCF12_Aurore.fasta |
Overlapping gene: | TCF12 |
Paralogs: | chr18:52891127-52891274
|
Ultraconserved Genomic Regulatory Block (UGRB): |
TCF12_cluster: chr15:57426321-57580603  |
External links: |
CONDOR database: | |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
|
Conservation in chicken: |
Chicken (galGal3): | Region: chr10:8405092-8405551        Identity: >95%This UCNE has 1 paralogous region in Chicken
Paralog #1:   chrUn_random:6972361-6972609   Identity: 96.02%
   E-value: 7.4e-27   Bit-score: 125.9 |
|
|
Conservation in other species: |
Mouse (mm10): | Region #1:   chr9:71844385-71844844   Identity: 96.54%
   E-value: 1.4e-56   Bit-score: 225.9 |
This UCNE has 1 paralogous region in Mouse
Paralog #1:   chr10:103727227-103727464   Identity: 71.97%
   E-value: 0.000000059   Bit-score: 64.4 |
|
|
Armadillo (dasNov1): | Region #1:   scaffold_17615:63036-63496   Identity: 98.05%
   E-value: 2.4e-53   Bit-score: 215.4 |
|
Opossum (monDom5): | Region #1:   chr1:164092612-164093072   Identity: 96.96%
   E-value: 2.4e-42   Bit-score: 179.1 |
|
Platypus (ornAna1): | Region #1:   Ultra366:65770-66237   Identity: 94.03%
   E-value: 6.9e-63   Bit-score: 246.4 |
This UCNE has 1 paralogous region in Platypus
Paralog #1:   chr3:26160407-26160678   Identity: 67.23%
   E-value: 0.00000099   Bit-score: 59.9 |
|
|
Zebra_finch (taeGut1): | Region #1:   chr10:7085568-7086028   Identity: 96.75%
   E-value: 1.2e-60   Bit-score: 238.4 |
|
Lizard (anoCar2): | Region #1:   chrUn_GL343573:385929-386337   Identity: 85.85%
   E-value: 7.6e-33   Bit-score: 146.5 |
|
Painted_turtle (chrPic1): | Region #1:   JH584895:1263929-1264389   Identity: 96.1%
   E-value: 5.8e-56   Bit-score: 223.8 |
|
Xenopus (xenTro3): | Region #1:   GL173225:624294-624744   Identity: 93.38%
   E-value: 1.4e-55   Bit-score: 221.7 |
|
Fugu (fr2): | Region #1:   chrUn:47214042-47214403   Identity: 75.66%
   E-value: 1.9e-38   Bit-score: 159.5 |
|
Medaka (oryLat2): | Region #1:   chr3:20167318-20167771   Identity: 70.17%
   E-value: 6.2e-28   Bit-score: 124.7 |
|
Stickleback (gasAcu1): | Region #1:   chrII:11419855-11420329   Identity: 69.17%
   E-value: 3e-33   Bit-score: 142.4 |
|
Tetraodon (tetNig2): | Region #1:   chr5:5411527-5411887   Identity: 75.66%
   E-value: 1.8e-37   Bit-score: 156.3 |
|
Zebrafish (danRer7): | Region #1:   chr7:53971903-53972394   Identity: 77.33%
   E-value: 1.8e-30   Bit-score: 134 |
|
Lamprey (petMar1): | Region #1:   Contig1130:5006-5269   Identity: 74.07%
   E-value: 0.0000000000018   Bit-score: 77.9 |
|
Ciona_intestinalis (ci2): |
|
Sea_urchin (strPur2): |
|
Lancelet (braFlo1): |
|