General information about the entry |
Entry location: | intron |
Position: | chr15:68040127-68040888  |
Length: | 734 nt |
Sequence: | SMAD3_Sam.fasta |
Overlapping gene: | MAP2K5 |
Paralogs: | chr18:45213284-45213441: SMAD2_Sam;
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Ultraconserved Genomic Regulatory Block (UGRB): |
SMAD3_cluster: chr15:67199281-68080218  |
External links: |
CONDOR database: | |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | uc.391 http://users.soe.ucsc.edu/~jill/ultra.html |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr10:21194272-21195033        Identity: >95%This UCNE has 1 paralogous region in Chicken
Paralog #1:   chrZ:1369624-1369914   Identity: 62.54%
   E-value: 0.0000075   Bit-score: 56.8 |
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr9:63217045-63217808   Identity: 94.63%
   E-value: 5e-116   Bit-score: 424.1 |
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Armadillo (dasNov1): | Region #1:   scaffold_2572:23873-24705   Identity: 83.47%
   E-value: 2.7e-88   Bit-score: 332.1 |
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Opossum (monDom5): | Region #1:   chr1:154683025-154683786   Identity: 95.8%
   E-value: 1.5e-98   Bit-score: 366.5 |
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Platypus (ornAna1): | Region #1:   Contig102:1167770-1168530   Identity: 95.27%
   E-value: 2e-127   Bit-score: 461.5 |
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Zebra_finch (taeGut1): | Region #1:   chr10:19799677-19800433   Identity: 94.45%
   E-value: 4.4e-119   Bit-score: 433.2 |
This UCNE has 1 paralogous region in Zebra_finch
Paralog #1:   chrZ_random:755442-755598   Identity: 71.34%
   E-value: 0.000088   Bit-score: 53.5 |
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Lizard (anoCar2): | Region #1:   chrUn_GL343467:591253-592044   Identity: 87.88%
   E-value: 1.8e-119   Bit-score: 434.9 |
This UCNE has 1 paralogous region in Lizard
Paralog #1:   chr2:1270318-1270473   Identity: 70.51%
   E-value: 0.000014   Bit-score: 56.6 |
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Painted_turtle (chrPic1): | Region #1:   JH584716:4973052-4973812   Identity: 95.14%
   E-value: 7.5e-117   Bit-score: 426.8 |
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Xenopus (xenTro3): | Region #1:   GL172676:195729-196645   Identity: 69.5%
   E-value: 2.6e-63   Bit-score: 248.2 |
This UCNE has 1 paralogous region in Xenopus
Paralog #1:   GL172853:944360-944522   Identity: 72.39%
   E-value: 0.000021   Bit-score: 55.8 |
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Fugu (fr2): | Region #1:   chrUn:8593448-8594267   Identity: 60.7%
   E-value: 4.9e-37   Bit-score: 155.5 |
Region #2:   chrUn:3448669-3448908   Identity: 76.67%
   E-value: 3.3e-23   Bit-score: 109.5 |
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Medaka (oryLat2): | Region #1:   chr6:11236183-11237018   Identity: 63.78%
   E-value: 1.5e-40   Bit-score: 167.3 |
Region #2:   chr3:11078736-11078972   Identity: 73.22%
   E-value: 6.6e-16   Bit-score: 85.4 |
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Stickleback (gasAcu1): | Region #1:   chrXIX:6700508-6701104   Identity: 68.73%
   E-value: 3.2e-46   Bit-score: 186.2 |
Region #2:   chrII:18656026-18656280   Identity: 71.8%
   E-value: 2.5e-17   Bit-score: 90.2 |
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Tetraodon (tetNig2): | Region #1:   chr13:8177610-8178387   Identity: 61.5%
   E-value: 4.2e-36   Bit-score: 152.4 |
Region #2:   chr5:10336398-10336988   Identity: 62.62%
   E-value: 3.7e-26   Bit-score: 119.3 |
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Zebrafish (danRer7): | Region #1:   chr18:19725110-19725989   Identity: 62.54%
   E-value: 8.2e-32   Bit-score: 139.1 |
Region #2:   chr7:35346785-35347404   Identity: 59.74%
   E-value: 0.00000000041   Bit-score: 67 |
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Lamprey (petMar1): |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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