General information about the entry |
Entry location: | intergenic |
Position: | chr16:50848986-50849204  |
Length: | 219 nt |
Sequence: | IRXB_Adam.fasta |
Upstream gene: | CYLD |
Downstream gene: | SALL1 |
Paralogs: | chr16:51934961-51935092
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Ultraconserved Genomic Regulatory Block (UGRB): |
IRXB_cluster: chr16:50493248-55425289  |
External links: |
CONDOR database: | |
VISTA Enhancer Browser: | hs85; |
UCE (Bejerano et al. 2004): | uc.399 http://users.soe.ucsc.edu/~jill/ultra.html |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr11:6449028-6449246        Identity: >95%This UCNE has 1 paralogous region in Chicken
Paralog #1:   chr11:5783703-5783895   Identity: 67.18%
   E-value: 0.0000029   Bit-score: 56.4 |
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr8:88758518-88758736   Identity: 99.09%
   E-value: 1.3e-34   Bit-score: 151.9 |
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Armadillo (dasNov1): | Region #1:   scaffold_79709:8334-8551   Identity: 98.62%
   E-value: 1.3e-29   Bit-score: 135.4 |
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Opossum (monDom5): | Region #1:   chr1:440039292-440039507   Identity: 98.61%
   E-value: 5.5e-28   Bit-score: 130.3 |
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Platypus (ornAna1): | Region #1:   Contig65:303219-303434   Identity: 98.61%
   E-value: 6.2e-36   Bit-score: 155.8 |
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Zebra_finch (taeGut1): | Region #1:   chr11:9991037-9991255   Identity: 97.26%
   E-value: 7.8e-34   Bit-score: 148.2 |
This UCNE has 2 paralogous regions in Zebra_finch
Paralog #1:   chrUn:159495797-159496014   Identity: 95.89%
   E-value: 3e-32   Bit-score: 143 |
Paralog #2:   chr11:9438564-9438756   Identity: 67.01%
   E-value: 0.000011   Bit-score: 54.7 |
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Lizard (anoCar2): |
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Painted_turtle (chrPic1): | Region #1:   JH584557:6070061-6070279   Identity: 96.35%
   E-value: 5.9e-31   Bit-score: 139.7 |
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Xenopus (xenTro3): | Region #1:   GL172748:2259591-2259801   Identity: 84.36%
   E-value: 4.9e-21   Bit-score: 106 |
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Fugu (fr2): | Region #1:   chrUn:76279382-76279570   Identity: 68.97%
   E-value: 0.0000000000011   Bit-score: 72.8 |
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Medaka (oryLat2): | Region #1:   chr3:29410970-29411157   Identity: 69.15%
   E-value: 0.000000000021   Bit-score: 68.7 |
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Stickleback (gasAcu1): | Region #1:   chrII:17841755-17841941   Identity: 69.35%
   E-value: 0.00000000000048   Bit-score: 74.2 |
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Tetraodon (tetNig2): | Region #1:   chrUn_random:36500078-36500265   Identity: 65.84%
   E-value: 0.0000000015   Bit-score: 62.4 |
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Zebrafish (danRer7): | Region #1:   chr7:38895233-38895394   Identity: 71.43%
   E-value: 0.0000089   Bit-score: 50.9 |
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Lamprey (petMar1): |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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