General information about the entry |
Entry location: | intergenic |
Position: | chr16:51732598-51733023  |
Length: | 426 nt |
Sequence: | IRXB_Ariel.fasta |
Upstream gene: | SALL1 |
Downstream gene: | TOX3 |
Paralogs: | chr16:50982359-50982535 chr18:75957201-75957505: SALL3_Ariel; SALL3_Ariana;
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Ultraconserved Genomic Regulatory Block (UGRB): |
IRXB_cluster: chr16:50493248-55425289  |
External links: |
CONDOR database: | CRCNE00001289; |
VISTA Enhancer Browser: | hs70; |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr11:5900371-5900796        Identity: >95%This UCNE has 2 paralogous regions in Chicken
Paralog #1:   chr2:58568921-58569262   Identity: 63.27%
   E-value: 5.6e-17   Bit-score: 93 |
Paralog #2:   chr11:6355287-6355579   Identity: 66.89%
   E-value: 2.6e-16   Bit-score: 90.8 |
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr8:89516059-89516482   Identity: 96.46%
   E-value: 4.1e-98   Bit-score: 363.8 |
This UCNE has 2 paralogous regions in Mouse
Paralog #1:   chr18:81548194-81548535   Identity: 61.11%
   E-value: 0.000000000000008   Bit-score: 87.1 |
Paralog #2:   chr8:88881597-88881770   Identity: 67.05%
   E-value: 0.000000024   Bit-score: 65.6 |
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Armadillo (dasNov1): | This UCNE has 2 paralogous regions in Armadillo
Paralog #1:   scaffold_7824:31599-31940   Identity: 61.7%
   E-value: 0.00000000000002   Bit-score: 86 |
Paralog #2:   scaffold_16127:49599-49774   Identity: 68.18%
   E-value: 0.0000000013   Bit-score: 70 |
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Opossum (monDom5): | Region #1:   chr1:441160013-441160436   Identity: 97.41%
   E-value: 2.3e-92   Bit-score: 345.1 |
This UCNE has 2 paralogous regions in Opossum
Paralog #1:   chr3:308341387-308341728   Identity: 62.97%
   E-value: 0.0000000000000014   Bit-score: 90.1 |
Paralog #2:   chr1:440220691-440220982   Identity: 63.48%
   E-value: 0.00000000002   Bit-score: 76.3 |
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Platypus (ornAna1): | Region #1:   Contig65:977147-977572   Identity: 96.24%
   E-value: 1.2e-93   Bit-score: 348.5 |
This UCNE has 2 paralogous regions in Platypus
Paralog #1:   Contig65:408821-409113   Identity: 63.95%
   E-value: 0.000000000000097   Bit-score: 83.1 |
Paralog #2:   Ultra88:8966-9311   Identity: 60.81%
   E-value: 0.00000000000017   Bit-score: 82.2 |
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Zebra_finch (taeGut1): | Region #1:   chr11:9538083-9538508   Identity: 95.31%
   E-value: 6.9e-92   Bit-score: 342 |
This UCNE has 2 paralogous regions in Zebra_finch
Paralog #1:   chr2:74311605-74311946   Identity: 63.27%
   E-value: 4.6e-17   Bit-score: 93.5 |
Paralog #2:   chr11:9912457-9912748   Identity: 65.53%
   E-value: 2.2e-16   Bit-score: 91.2 |
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Lizard (anoCar2): | Region #1:   chrUn_GL343227:467667-468092   Identity: 90.85%
   E-value: 1.3e-85   Bit-score: 321.7 |
This UCNE has 2 paralogous regions in Lizard
Paralog #1:   chr4:51663384-51663725   Identity: 63.45%
   E-value: 3.6e-18   Bit-score: 97.7 |
Paralog #2:   chrUn_GL343227:1057288-1057580   Identity: 64.29%
   E-value: 0.0000000000026   Bit-score: 78.2 |
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Painted_turtle (chrPic1): | Region #1:   JH584557:5259365-5259789   Identity: 95.76%
   E-value: 1.1e-91   Bit-score: 342.4 |
This UCNE has 2 paralogous regions in Painted_turtle
Paralog #1:   JH584442:6392677-6393018   Identity: 63.56%
   E-value: 3e-17   Bit-score: 95.1 |
Paralog #2:   JH584557:5901512-5901804   Identity: 66.89%
   E-value: 4e-16   Bit-score: 91.4 |
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Xenopus (xenTro3): | Region #1:   GL172748:1665021-1665446   Identity: 89.44%
   E-value: 2e-78   Bit-score: 297.6 |
This UCNE has 2 paralogous regions in Xenopus
Paralog #1:   GL173521:99520-99884   Identity: 60.33%
   E-value: 0.0000000000000045   Bit-score: 87.1 |
Paralog #2:   GL172748:2178656-2178950   Identity: 61.49%
   E-value: 0.00000000034   Bit-score: 70.9 |
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Fugu (fr2): | Region #1:   chrUn:76420974-76421380   Identity: 82.15%
   E-value: 2.1e-74   Bit-score: 278.8 |
This UCNE has 1 paralogous region in Fugu
Paralog #1:   chrUn:76304588-76304761   Identity: 67.24%
   E-value: 0.000000000000037   Bit-score: 78.7 |
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Medaka (oryLat2): | Region #1:   chr3:29206931-29207326   Identity: 83.67%
   E-value: 5.1e-73   Bit-score: 274.4 |
This UCNE has 2 paralogous regions in Medaka
Paralog #1:   chr3:29367017-29367190   Identity: 67.82%
   E-value: 0.000000000000072   Bit-score: 77.9 |
Paralog #2:   ultracontig182:1693874-1694074   Identity: 65.69%
   E-value: 0.00000000001   Bit-score: 70.7 |
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Stickleback (gasAcu1): | Region #1:   chrII:17684845-17685174   Identity: 81.33%
   E-value: 6.7e-57   Bit-score: 220.9 |
This UCNE has 2 paralogous regions in Stickleback
Paralog #1:   chrII:17814490-17814663   Identity: 66.67%
   E-value: 0.00000000000042   Bit-score: 75.4 |
Paralog #2:   chrXX:4310771-4310925   Identity: 71.52%
   E-value: 0.0000000000019   Bit-score: 73.2 |
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Tetraodon (tetNig2): | This UCNE has 2 paralogous regions in Tetraodon
Paralog #1:   chrUn_random:36541948-36542121   Identity: 68.18%
   E-value: 0.00000000000011   Bit-score: 77.2 |
Paralog #2:   chr8:2603880-2604067   Identity: 66.84%
   E-value: 0.000000000037   Bit-score: 68.7 |
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Zebrafish (danRer7): | Region #1:   chr7:38604466-38604827   Identity: 76.98%
   E-value: 8.1e-49   Bit-score: 194.8 |
This UCNE has 2 paralogous regions in Zebrafish
Paralog #1:   chr7:38840522-38840697   Identity: 63.84%
   E-value: 0.000000042   Bit-score: 59.5 |
Paralog #2:   chr16:7734594-7734920   Identity: 58.1%
   E-value: 0.000006   Bit-score: 52.4 |
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Lamprey (petMar1): |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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