UCNE: IRXB_Vivien
(id = 15197)

General information about the entry
Entry location:intergenic
Position:chr16:55223332-55223889
Length:558 nt
Sequence:IRXB_Vivien.fasta
Upstream gene:IRX5
Downstream gene:IRX6
Paralogs:chr16:54323658-54324032: IRXB_Ruby;
chr5:2112603-2113140: IRXA_Vivien_1; IRXA_Vivien_2;
chr5:3512720-3513141: IRXA_Ruby;
Ultraconserved Genomic Regulatory Block (UGRB): IRXB_cluster: chr16:50493248-55425289
External links:
CONDOR database:CRCNE00007395;
VISTA Enhancer Browser:hs26;
UCE (Bejerano et al. 2004):uc.404 http://users.soe.ucsc.edu/~jill/ultra.html
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr11:3909296-3909853        Identity: >95%
This UCNE has 3 paralogous regions in Chicken

Conservation in other species:
Mouse (mm10):
Region #1:   chr8:92545531-92546088   Identity: 99.1%    E-value: 9.9e-134   Bit-score: 482.5
This UCNE has 3 paralogous regions in Mouse

Armadillo (dasNov1):
Region #1:   scaffold_52790:8963-9520   Identity: 99.82%    E-value: 2.8e-119   Bit-score: 434.7
This UCNE has 3 paralogous regions in Armadillo

Opossum (monDom5):
Region #1:   chr1:445527793-445528347   Identity: 97.13%    E-value: 5.6e-123   Bit-score: 447.2
This UCNE has 3 paralogous regions in Opossum

Platypus (ornAna1):
Region #1:   Ultra380:3486711-3487263   Identity: 96.94%    E-value: 1.4e-127   Bit-score: 461.6
This UCNE has 3 paralogous regions in Platypus

Zebra_finch (taeGut1):
Region #1:   chr11:7715947-7716503   Identity: 98.03%    E-value: 1.1e-131   Bit-score: 474.7
This UCNE has 3 paralogous regions in Zebra_finch

Lizard (anoCar2):
Region #1:   chrLGc:1995130-1995690   Identity: 95.37%    E-value: 4.5e-132   Bit-score: 476.4
This UCNE has 3 paralogous regions in Lizard

Painted_turtle (chrPic1):
Region #1:   JH584557:2038450-2038642   Identity: 95.85%    E-value: 9.7e-37   Bit-score: 160.3
This UCNE has 1 paralogous region in Painted_turtle

Xenopus (xenTro3):
Region #1:   GL173094:443094-443620   Identity: 88.85%    E-value: 6.8e-95   Bit-score: 352.7
This UCNE has 3 paralogous regions in Xenopus

Fugu (fr2):
Region #1:   chrUn:77130141-77130642   Identity: 81.07%    E-value: 7.6e-90   Bit-score: 330.5
This UCNE has 4 paralogous regions in Fugu

Medaka (oryLat2):
Region #1:   chr3:28084615-28085103   Identity: 82.86%    E-value: 2.9e-86   Bit-score: 318.7
This UCNE has 4 paralogous regions in Medaka

Stickleback (gasAcu1):
Region #1:   chrII:16907641-16908119   Identity: 84.97%    E-value: 4.2e-92   Bit-score: 338.2
This UCNE has 3 paralogous regions in Stickleback

Tetraodon (tetNig2):
Region #1:   chr5:1187479-1187995   Identity: 80.08%    E-value: 2.9e-87   Bit-score: 321.9
This UCNE has 1 paralogous region in Tetraodon

Zebrafish (danRer7):
Region #1:   chr7:37004705-37005184   Identity: 85.24%    E-value: 2.9e-81   Bit-score: 303
Region #2:   chr25:37226713-37227137   Identity: 67.51%    E-value: 3.1e-32   Bit-score: 140.1
This UCNE has 5 paralogous regions in Zebrafish

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):