General information about the entry |
Entry location: | intergenic |
Position: | chr16:80423831-80424161  |
Length: | 331 nt |
Sequence: | chr16_Wagner.fasta |
Upstream gene: | MAF |
Downstream gene: | DYNLRB2 |
Paralogs: | chr3:19028490-19028604: SATB1_Wagner;
|
External links: |
CONDOR database: | CRCNE00006501; CRCNE00011474; |
VISTA Enhancer Browser: | hs3; |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
|
Conservation in chicken: |
Chicken (galGal3): | Region: chr11:16574132-16574462        Identity: >95%
|
Conservation in other species: |
Mouse (mm10): | Region #1:   chr8:116384613-116384944   Identity: 95.78%
   E-value: 8.1e-56   Bit-score: 222.9 |
|
Armadillo (dasNov1): | Region #1:   scaffold_6420:29416-29746   Identity: 99.4%
   E-value: 8.7e-55   Bit-score: 219.7 |
|
Opossum (monDom5): | Region #1:   chr1:665119997-665120327   Identity: 99.4%
   E-value: 3e-53   Bit-score: 214.8 |
|
Platypus (ornAna1): | Region #1:   chr1:20090580-20090911   Identity: 91.27%
   E-value: 1.1e-52   Bit-score: 212.1 |
|
Zebra_finch (taeGut1): | Region #1:   chr11:2960798-2961127   Identity: 98.18%
   E-value: 1.2e-59   Bit-score: 234.6 |
|
Lizard (anoCar2): | Region #1:   chrLGc:5434429-5434721   Identity: 93.9%
   E-value: 1.3e-51   Bit-score: 208.4 |
|
Painted_turtle (chrPic1): | Region #1:   JH584599:9682020-9682349   Identity: 97.58%
   E-value: 1.2e-57   Bit-score: 229 |
|
Xenopus (xenTro3): | Region #1:   GL172982:793504-793799   Identity: 95.95%
   E-value: 2.6e-49   Bit-score: 200.5 |
|
Fugu (fr2): | Region #1:   chrUn:80188251-80188560   Identity: 76.13%
   E-value: 1.8e-40   Bit-score: 165.8 |
Region #2:   chrUn:48150706-48151010   Identity: 69.9%
   E-value: 2.8e-27   Bit-score: 121.9 |
This UCNE has 1 paralogous region in Fugu
Paralog #1:   chrUn:230844404-230844518   Identity: 71.79%
   E-value: 0.000000082   Bit-score: 57.2 |
|
|
Medaka (oryLat2): | Region #1:   chr6:15738017-15738348   Identity: 74.55%
   E-value: 2.7e-35   Bit-score: 148.7 |
Region #2:   chr3:21668634-21668893   Identity: 67.56%
   E-value: 2.2e-16   Bit-score: 85.8 |
This UCNE has 1 paralogous region in Medaka
Paralog #1:   scaffold6244:2750-2847   Identity: 75%
   E-value: 0.000014   Bit-score: 50 |
|
|
Stickleback (gasAcu1): | Region #1:   chrXIX:15655035-15655366   Identity: 73.35%
   E-value: 4.4e-36   Bit-score: 151.4 |
Region #2:   chrII:12570865-12571174   Identity: 70.19%
   E-value: 5.9e-26   Bit-score: 117.7 |
This UCNE has 1 paralogous region in Stickleback
Paralog #1:   chrXX:15121827-15121941   Identity: 75.21%
   E-value: 0.000000007   Bit-score: 61 |
|
|
Tetraodon (tetNig2): | Region #1:   chr13:4610910-4611235   Identity: 73.78%
   E-value: 7.3e-38   Bit-score: 157.1 |
Region #2:   chr5:4491498-4491793   Identity: 73.33%
   E-value: 6.8e-30   Bit-score: 130.6 |
This UCNE has 1 paralogous region in Tetraodon
Paralog #1:   chrUn_random:29561196-29561310   Identity: 72.65%
   E-value: 0.000000042   Bit-score: 58.2 |
|
|
Zebrafish (danRer7): | Region #1:   chr25:37561683-37561994   Identity: 74.36%
   E-value: 2.1e-23   Bit-score: 110 |
Region #2:   chr18:29175536-29175747   Identity: 66.2%
   E-value: 0.00000026   Bit-score: 56.6 |
|
Lamprey (petMar1): |
|
Ciona_intestinalis (ci2): |
|
Sea_urchin (strPur2): |
|
Lancelet (braFlo1): |
|