General information about the entry |
Entry location: | intron |
Position: | chr17:46371414-46371616  |
Length: | 203 nt |
Sequence: | HOXB_Kazuki.fasta |
Overlapping gene: | SKAP1 |
Paralogs: | chr7:26880727-26880857: HOXA_Kazuki;
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Ultraconserved Genomic Regulatory Block (UGRB): |
HOXB_cluster: chr17:46255887-46371616  |
External links: |
CONDOR database: | |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr27:3757361-3757563        Identity: >95%This UCNE has 1 paralogous region in Chicken
Paralog #1:   chr2:32410934-32411131   Identity: 63.73%
   E-value: 0.00000081   Bit-score: 58.2 |
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr11:96596155-96596356   Identity: 97.52%
   E-value: 1.9e-48   Bit-score: 197.8 |
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Armadillo (dasNov1): | Region #1:   scaffold_184513:5060-5253   Identity: 98.97%
   E-value: 1.9e-45   Bit-score: 187.9 |
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Opossum (monDom5): | Region #1:   chr2:200793288-200793490   Identity: 99.01%
   E-value: 4.8e-49   Bit-score: 200.2 |
This UCNE has 1 paralogous region in Opossum
Paralog #1:   chr8:297634905-297635065   Identity: 64.67%
   E-value: 0.000041   Bit-score: 54.2 |
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Platypus (ornAna1): | Region #1:   Ultra133:170020-170222   Identity: 96.55%
   E-value: 1.3e-47   Bit-score: 194.5 |
This UCNE has 1 paralogous region in Platypus
Paralog #1:   Ultra231:2022069-2022255   Identity: 64.25%
   E-value: 0.00000071   Bit-score: 59.2 |
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Zebra_finch (taeGut1): | Region #1:   chr27:4444608-4444747   Identity: 90.71%
   E-value: 7.8e-26   Bit-score: 121.5 |
This UCNE has 2 paralogous regions in Zebra_finch
Paralog #1:   chr27:4444882-4445112   Identity: 67.97%
   E-value: 1.7e-16   Bit-score: 90.5 |
Paralog #2:   chr2:52441083-52441280   Identity: 63.24%
   E-value: 0.0000026   Bit-score: 56.7 |
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Lizard (anoCar2): | Region #1:   chr6:75279872-75280077   Identity: 88.35%
   E-value: 2.5e-39   Bit-score: 166.9 |
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Painted_turtle (chrPic1): | Region #1:   JH584731:2209321-2209523   Identity: 95.57%
   E-value: 1.4e-46   Bit-score: 191.5 |
This UCNE has 1 paralogous region in Painted_turtle
Paralog #1:   JH584682:417907-418104   Identity: 63.73%
   E-value: 0.0000013   Bit-score: 58.7 |
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Xenopus (xenTro3): | Region #1:   GL182583:9846-10042   Identity: 62.93%
   E-value: 0.00000041   Bit-score: 59.6 |
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Fugu (fr2): | Region #1:   chrUn:201267926-201268071   Identity: 63.01%
   E-value: 0.0000068   Bit-score: 50.2 |
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Medaka (oryLat2): | Region #1:   chr19:17561617-17561747   Identity: 66.41%
   E-value: 0.00000034   Bit-score: 54.6 |
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Stickleback (gasAcu1): | Region #1:   chrV:4581667-4581832   Identity: 61.9%
   E-value: 0.000014   Bit-score: 49.3 |
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Tetraodon (tetNig2): |
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Zebrafish (danRer7): | Region #1:   chr12:28735705-28735842   Identity: 67.63%
   E-value: 0.0000002   Bit-score: 56.2 |
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Lamprey (petMar1): |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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