General information about the entry |
Entry location: | UTR |
Position: | chr17:48939588-48939853  |
Length: | 266 nt |
Sequence: | LUC7L3_Jeremy_1.fasta |
Overlapping gene: | TOB1 |
Paralogs: | |
Ultraconserved Genomic Regulatory Block (UGRB): |
LUC7L3_cluster: chr17:48827816-48940085  |
External links: |
CONDOR database: | |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
|
Conservation in chicken: |
Chicken (galGal3): | Region: chr18:10034425-10034698        Identity: >95%
|
Conservation in other species: |
Mouse (mm10): | Region #1:   chr11:94215229-94215492   Identity: 98.12%
   E-value: 2.8e-31   Bit-score: 141.1 |
|
Armadillo (dasNov1): | Region #1:   scaffold_158123:4448-4712   Identity: 94.74%
   E-value: 2.7e-26   Bit-score: 124.7 |
Region #2:   scaffold_35908:4158-4454   Identity: 72.76%
   E-value: 0.00000000000028   Bit-score: 81.5 |
|
Opossum (monDom5): | Region #1:   chr2:184624979-184625248   Identity: 94.89%
   E-value: 1e-22   Bit-score: 113.1 |
This UCNE has 4 paralogous regions in Opossum
Paralog #1:   chr3:283253421-283253683   Identity: 94.38%
   E-value: 1.3e-21   Bit-score: 109.4 |
Paralog #2:   chr3:356370032-356370293   Identity: 89.93%
   E-value: 5.8e-19   Bit-score: 100.6 |
Paralog #3:   chr7:220135825-220136092   Identity: 88.24%
   E-value: 2.5e-18   Bit-score: 98.5 |
Paralog #4:   chr1:116505587-116505759   Identity: 78.65%
   E-value: 0.000065   Bit-score: 54 |
|
|
Platypus (ornAna1): | Region #1:   Contig8660:17062-17339   Identity: 91.07%
   E-value: 1.5e-31   Bit-score: 141.6 |
|
Zebra_finch (taeGut1): | Region #1:   chr18:9543004-9543274   Identity: 93.09%
   E-value: 5.7e-29   Bit-score: 132.4 |
|
Lizard (anoCar2): | Region #1:   chr2:117453074-117453344   Identity: 85.71%
   E-value: 1.4e-19   Bit-score: 101.6 |
|
Painted_turtle (chrPic1): | Region #1:   JH584792:3205281-3205555   Identity: 91.4%
   E-value: 5.1e-26   Bit-score: 123.6 |
|
Xenopus (xenTro3): | Region #1:   GL172814:552405-552624   Identity: 69.96%
   E-value: 0.00000038   Bit-score: 60.1 |
|
Fugu (fr2): | Region #1:   chrUn:273474919-273475198   Identity: 82.01%
   E-value: 7.4e-33   Bit-score: 140.1 |
Region #2:   chrUn:266940728-266941002   Identity: 80.07%
   E-value: 1.7e-29   Bit-score: 129 |
|
Medaka (oryLat2): | Region #1:   ultracontig221:351747-351975   Identity: 79.41%
   E-value: 3.6e-18   Bit-score: 91.5 |
Region #2:   chr8:13863932-13864146   Identity: 78.95%
   E-value: 1.3e-16   Bit-score: 86.3 |
|
Stickleback (gasAcu1): | Region #1:   chrV:6088743-6089023   Identity: 82.29%
   E-value: 4.4e-29   Bit-score: 127.8 |
Region #2:   chrXI:11894963-11895228   Identity: 79.51%
   E-value: 2.5e-25   Bit-score: 115.3 |
|
Tetraodon (tetNig2): | Region #1:   chr2:4267786-4268060   Identity: 82.39%
   E-value: 3.9e-32   Bit-score: 137.7 |
Region #2:   chr3:8879306-8879580   Identity: 77.97%
   E-value: 3.5e-26   Bit-score: 118 |
|
Zebrafish (danRer7): | Region #1:   chr12:1044320-1044592   Identity: 81.79%
   E-value: 7.1e-17   Bit-score: 88 |
Region #2:   chr3:17914558-17914833   Identity: 75.96%
   E-value: 0.0000000000021   Bit-score: 73.1 |
|
Lamprey (petMar1): |
|
Ciona_intestinalis (ci2): |
|
Sea_urchin (strPur2): |
|
Lancelet (braFlo1): |
|