General information about the entry |
Entry location: | UTR |
Position: | chr17:56081107-56081424  |
Length: | 318 nt |
Sequence: | MSI2_Noah.fasta |
Overlapping gene: | SFRS1 |
Paralogs: | chr10:106200034-106200314 chr13:69980162-69980563 chr7:49713107-49713280
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Ultraconserved Genomic Regulatory Block (UGRB): |
MSI2_cluster: chr17:55483958-56082438  |
External links: |
CONDOR database: | |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr19:8670554-8670872        Identity: >95%
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr11:88050916-88051238   Identity: 96%
   E-value: 1e-72   Bit-score: 279 |
This UCNE has 1 paralogous region in Mouse
Paralog #1:   chr19:48019107-48019354   Identity: 62.85%
   E-value: 0.00000003   Bit-score: 64.9 |
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Armadillo (dasNov1): | Region #1:   scaffold_66835:1065-1300   Identity: 84.58%
   E-value: 7.2e-35   Bit-score: 153.5 |
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Opossum (monDom5): | Region #1:   chr2:174832620-174832937   Identity: 97.51%
   E-value: 2.8e-73   Bit-score: 281.3 |
This UCNE has 5 paralogous regions in Opossum
Paralog #1:   chr4:131982135-131982450   Identity: 96.87%
   E-value: 1e-71   Bit-score: 276.2 |
Paralog #2:   chr1:302224376-302224688   Identity: 91.51%
   E-value: 2.5e-62   Bit-score: 245 |
Paralog #3:   chr1:530106156-530106465   Identity: 82.76%
   E-value: 1.1e-48   Bit-score: 199.7 |
Paralog #4:   chr3:202950696-202951015   Identity: 73.99%
   E-value: 2.2e-33   Bit-score: 148.8 |
Paralog #5:   chr3:139193461-139193724   Identity: 75.66%
   E-value: 1e-26   Bit-score: 126.6 |
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Platypus (ornAna1): | Region #1:   Contig6226:4350-4667   Identity: 98.12%
   E-value: 1e-78   Bit-score: 298.5 |
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Zebra_finch (taeGut1): | Region #1:   chr19:10448194-10448508   Identity: 97.47%
   E-value: 3.5e-79   Bit-score: 299.4 |
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Lizard (anoCar2): | Region #1:   chrUn_GL344193:32981-33289   Identity: 93.06%
   E-value: 5.7e-72   Bit-score: 275.9 |
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Painted_turtle (chrPic1): | Region #1:   JH584693:3798594-3798906   Identity: 97.15%
   E-value: 6e-78   Bit-score: 296.4 |
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Xenopus (xenTro3): | Region #1:   GL173152:127874-128186   Identity: 85.98%
   E-value: 5.1e-54   Bit-score: 216.1 |
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Fugu (fr2): | Region #1:   chrUn:280226211-280226338   Identity: 74.81%
   E-value: 0.00000000016   Bit-score: 66.2 |
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Medaka (oryLat2): | Region #1:   chr13:9500037-9500205   Identity: 67.37%
   E-value: 0.00000000065   Bit-score: 64.3 |
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Stickleback (gasAcu1): | Region #1:   chrI:12141227-12141437   Identity: 64.94%
   E-value: 0.000000000025   Bit-score: 69.1 |
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Tetraodon (tetNig2): | Region #1:   chr16:3851695-3851945   Identity: 62.82%
   E-value: 0.000000000007   Bit-score: 70.7 |
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Zebrafish (danRer7): | Region #1:   chr21:38404226-38404434   Identity: 74.21%
   E-value: 1.1e-16   Bit-score: 87.6 |
Region #2:   chr15:15091427-15091590   Identity: 71.89%
   E-value: 0.000000000017   Bit-score: 70.4 |
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Lamprey (petMar1): |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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