General information about the entry |
Entry location: | intron |
Position: | chr18:53089797-53090170  |
Length: | 374 nt |
Sequence: | TCF4_Hannibal.fasta |
Overlapping gene: | TCF4 |
Paralogs: | chr15:57426400-57426588: TCF12_Hannibal;
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Ultraconserved Genomic Regulatory Block (UGRB): |
TCF4_cluster: chr18:53004012-53963879  |
External links: |
CONDOR database: | |
VISTA Enhancer Browser: | hs376; |
UCE (Bejerano et al. 2004): | uc.435 http://users.soe.ucsc.edu/~jill/ultra.html |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chrUn_random:33004333-33004758        Identity: >95%This UCNE has 1 paralogous region in Chicken
Paralog #1:   chr10:8497697-8497912   Identity: 72.15%
   E-value: 0.0000000000000086   Bit-score: 85.5 |
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr18:69500227-69500604   Identity: 98.15%
   E-value: 2.5e-81   Bit-score: 307.8 |
This UCNE has 1 paralogous region in Mouse
Paralog #1:   chr9:71975330-71975528   Identity: 72.14%
   E-value: 0.000000000000027   Bit-score: 85.2 |
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Armadillo (dasNov1): |
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Opossum (monDom5): | Region #1:   chr3:251646533-251646904   Identity: 99.73%
   E-value: 1.4e-73   Bit-score: 282.5 |
This UCNE has 1 paralogous region in Opossum
Paralog #1:   chr1:164245665-164245880   Identity: 72.15%
   E-value: 0.00000000000019   Bit-score: 82.8 |
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Platypus (ornAna1): | Region #1:   chr3:26386826-26387222   Identity: 92.95%
   E-value: 1.1e-73   Bit-score: 282 |
This UCNE has 1 paralogous region in Platypus
Paralog #1:   Ultra366:194616-194831   Identity: 71.69%
   E-value: 0.0000000000000046   Bit-score: 87.3 |
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Zebra_finch (taeGut1): | Region #1:   chrUn:107099288-107099551   Identity: 73.48%
   E-value: 9.6e-23   Bit-score: 112.2 |
This UCNE has 1 paralogous region in Zebra_finch
Paralog #1:   chr10:7169344-7169559   Identity: 72.15%
   E-value: 0.0000000000000035   Bit-score: 87 |
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Lizard (anoCar2): | Region #1:   chrUn_GL343213:843835-844206   Identity: 98.12%
   E-value: 2.9e-80   Bit-score: 303.7 |
This UCNE has 1 paralogous region in Lizard
Paralog #1:   chrUn_GL343573:415721-415932   Identity: 70.78%
   E-value: 0.000000000000046   Bit-score: 83.8 |
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Painted_turtle (chrPic1): | This UCNE has 1 paralogous region in Painted_turtle
Paralog #1:   JH584895:1395288-1395503   Identity: 72.15%
   E-value: 0.0000000000000077   Bit-score: 86.9 |
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Xenopus (xenTro3): | Region #1:   GL172733:894387-894756   Identity: 91.94%
   E-value: 7.3e-62   Bit-score: 242.4 |
This UCNE has 1 paralogous region in Xenopus
Paralog #1:   GL173225:564120-564336   Identity: 70.91%
   E-value: 0.00000000000017   Bit-score: 81.7 |
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Fugu (fr2): | Region #1:   chrUn:256360876-256361170   Identity: 78.55%
   E-value: 2.7e-36   Bit-score: 152 |
This UCNE has 2 paralogous regions in Fugu
Paralog #1:   chrUn:47241446-47241668   Identity: 66.96%
   E-value: 0.000000000013   Bit-score: 70.1 |
Paralog #2:   chrUn:247055677-247055877   Identity: 63.68%
   E-value: 0.00000000021   Bit-score: 66 |
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Medaka (oryLat2): | Region #1:   chr12:28790695-28790786   Identity: 88.17%
   E-value: 0.00000000015   Bit-score: 66.7 |
This UCNE has 2 paralogous regions in Medaka
Paralog #1:   chr3:20203747-20203961   Identity: 67.12%
   E-value: 0.00000000000018   Bit-score: 76.4 |
Paralog #2:   chr6:10224540-10224727   Identity: 60.53%
   E-value: 0.000013   Bit-score: 50.2 |
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Stickleback (gasAcu1): | Region #1:   chrUn:21014813-21015031   Identity: 85.45%
   E-value: 1.4e-31   Bit-score: 136.6 |
This UCNE has 2 paralogous regions in Stickleback
Paralog #1:   chrII:11456838-11457042   Identity: 69.23%
   E-value: 0.00000000000002   Bit-score: 79.6 |
Paralog #2:   chrXIX:7474905-7475102   Identity: 63.82%
   E-value: 0.0000000073   Bit-score: 61.1 |
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Tetraodon (tetNig2): | This UCNE has 2 paralogous regions in Tetraodon
Paralog #1:   chr5:5386468-5386695   Identity: 66.11%
   E-value: 0.000000000031   Bit-score: 68.8 |
Paralog #2:   chr13:11751060-11751247   Identity: 63.83%
   E-value: 0.0000000057   Bit-score: 61.3 |
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Zebrafish (danRer7): | Region #1:   chr21:1502702-1503058   Identity: 84.31%
   E-value: 1.3e-46   Bit-score: 187.3 |
This UCNE has 1 paralogous region in Zebrafish
Paralog #1:   chr7:54058879-54059087   Identity: 71.43%
   E-value: 0.0000000000003   Bit-score: 76.4 |
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Lamprey (petMar1): | This UCNE has 1 paralogous region in Lamprey
Paralog #1:   Contig685:19813-20031   Identity: 65.33%
   E-value: 0.0000017   Bit-score: 57.8 |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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