General information about the entry |
Entry location: | intron |
Position: | chr18:53090771-53090980  |
Length: | 210 nt |
Sequence: | TCF4_Nick.fasta |
Overlapping gene: | TCF4 |
Paralogs: | chr15:57425693-57425842
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Ultraconserved Genomic Regulatory Block (UGRB): |
TCF4_cluster: chr18:53004012-53963879  |
External links: |
CONDOR database: | |
VISTA Enhancer Browser: | hs376; |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chrUn_random:33003668-33003877        Identity: >95%This UCNE has 1 paralogous region in Chicken
Paralog #1:   chr10:8498443-8498589   Identity: 78.91%
   E-value: 0.0000000000000012   Bit-score: 87.6 |
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr18:69499262-69499471   Identity: 99.52%
   E-value: 4.1e-47   Bit-score: 193.4 |
This UCNE has 1 paralogous region in Mouse
Paralog #1:   chr9:71976120-71976271   Identity: 78.29%
   E-value: 0.0000000000000071   Bit-score: 86.3 |
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Armadillo (dasNov1): | This UCNE has 1 paralogous region in Armadillo
Paralog #1:   scaffold_395:14737-14888   Identity: 76.32%
   E-value: 0.0000000000011   Bit-score: 79.1 |
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Opossum (monDom5): | Region #1:   chr3:251645713-251645922   Identity: 98.1%
   E-value: 2e-49   Bit-score: 201.5 |
This UCNE has 1 paralogous region in Opossum
Paralog #1:   chr1:164246447-164246587   Identity: 80.85%
   E-value: 2.5e-16   Bit-score: 91.6 |
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Platypus (ornAna1): | Region #1:   chr3:26387765-26387974   Identity: 97.62%
   E-value: 1.3e-50   Bit-score: 204.6 |
This UCNE has 1 paralogous region in Platypus
Paralog #1:   Ultra366:195400-195541   Identity: 78.87%
   E-value: 8.4e-17   Bit-score: 92.2 |
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Zebra_finch (taeGut1): | This UCNE has 1 paralogous region in Zebra_finch
Paralog #1:   chr10:7170057-7170198   Identity: 80.28%
   E-value: 4.1e-16   Bit-score: 89.3 |
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Lizard (anoCar2): | Region #1:   chrUn_GL343213:844779-844988   Identity: 97.14%
   E-value: 2.2e-50   Bit-score: 203.6 |
This UCNE has 1 paralogous region in Lizard
Paralog #1:   chrUn_GL343573:416417-416536   Identity: 74.17%
   E-value: 0.0000000073   Bit-score: 65.7 |
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Painted_turtle (chrPic1): | Region #1:   JH584680:16606973-16607182   Identity: 98.1%
   E-value: 1.5e-50   Bit-score: 204.7 |
This UCNE has 1 paralogous region in Painted_turtle
Paralog #1:   JH584895:1395978-1396121   Identity: 79.86%
   E-value: 7.5e-17   Bit-score: 92.8 |
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Xenopus (xenTro3): | Region #1:   GL172733:893609-893755   Identity: 91.84%
   E-value: 7.3e-26   Bit-score: 121.9 |
This UCNE has 1 paralogous region in Xenopus
Paralog #1:   GL173225:563609-563758   Identity: 80.67%
   E-value: 5.7e-18   Bit-score: 95.7 |
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Fugu (fr2): | Region #1:   chrUn:256354284-256354381   Identity: 76.58%
   E-value: 0.000000000035   Bit-score: 67.8 |
This UCNE has 2 paralogous regions in Fugu
Paralog #1:   chrUn:47242088-47242229   Identity: 76.39%
   E-value: 8.2e-17   Bit-score: 86.5 |
Paralog #2:   chrUn:247055232-247055353   Identity: 68.85%
   E-value: 0.000000081   Bit-score: 56.6 |
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Medaka (oryLat2): | Region #1:   chr12:28786872-28786969   Identity: 76.58%
   E-value: 0.000000000081   Bit-score: 66.7 |
This UCNE has 2 paralogous regions in Medaka
Paralog #1:   chr3:20204362-20204545   Identity: 71.2%
   E-value: 3.6e-18   Bit-score: 91.1 |
Paralog #2:   chr6:10225054-10225175   Identity: 73.17%
   E-value: 0.0000000039   Bit-score: 61.1 |
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Stickleback (gasAcu1): | Region #1:   chrUn:21017639-21017736   Identity: 72.97%
   E-value: 0.000000015   Bit-score: 59.2 |
This UCNE has 2 paralogous regions in Stickleback
Paralog #1:   chrII:11457507-11457651   Identity: 78.62%
   E-value: 3.1e-18   Bit-score: 91.4 |
Paralog #2:   chrXIX:7474371-7474492   Identity: 71.54%
   E-value: 0.000000057   Bit-score: 57.3 |
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Tetraodon (tetNig2): | Region #1:   chrUn_random:23690450-23690547   Identity: 77.48%
   E-value: 0.000000000022   Bit-score: 68.5 |
This UCNE has 2 paralogous regions in Tetraodon
Paralog #1:   chr5:5385900-5386037   Identity: 78.99%
   E-value: 2.9e-17   Bit-score: 88 |
Paralog #2:   chr13:11751540-11751661   Identity: 70.49%
   E-value: 0.000000012   Bit-score: 59.4 |
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Zebrafish (danRer7): | Region #1:   chr21:1502103-1502293   Identity: 81.35%
   E-value: 3.1e-26   Bit-score: 118.8 |
This UCNE has 1 paralogous region in Zebrafish
Paralog #1:   chr7:54061111-54061251   Identity: 78.01%
   E-value: 0.0000000000000064   Bit-score: 81.2 |
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Lamprey (petMar1): | This UCNE has 1 paralogous region in Lamprey
Paralog #1:   Contig685:18888-19031   Identity: 79.86%
   E-value: 0.00000000000012   Bit-score: 80.7 |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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