UCNE: TSHZ1_Urania
(id = 17701)

General information about the entry
Entry location:intron
Position:chr18:72592608-72592990
Length:383 nt
Sequence:TSHZ1_Urania.fasta
Overlapping gene:ZNF407
Paralogs:chr20:51058414-51058547: TSHZ2_Urania;
Ultraconserved Genomic Regulatory Block (UGRB): TSHZ1_cluster: chr18:72348362-73931585
External links:
CONDOR database:CRCNE00011555; CRCNE00008783;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):uc.442 http://users.soe.ucsc.edu/~jill/ultra.html
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr2:93951791-93952176        Identity: >95%
This UCNE has 1 paralogous region in Chicken

Conservation in other species:
Mouse (mm10):
Region #1:   chr18:84350986-84351367   Identity: 98.17%    E-value: 5.2e-65   Bit-score: 253.7

Armadillo (dasNov1):
Region #1:   scaffold_1419:1012-1394   Identity: 98.17%    E-value: 1.6e-66   Bit-score: 258.9

Opossum (monDom5):
Region #1:   chr3:303037216-303037598   Identity: 97.91%    E-value: 4.3e-69   Bit-score: 267.7

Platypus (ornAna1):
Region #1:   Ultra88:699588-699966   Identity: 95.25%    E-value: 1.2e-74   Bit-score: 285.2
This UCNE has 1 paralogous region in Platypus

Zebra_finch (taeGut1):
Region #1:   chr2:97021879-97022265   Identity: 97.42%    E-value: 1.9e-73   Bit-score: 280.6
This UCNE has 2 paralogous regions in Zebra_finch

Lizard (anoCar2):
Region #1:   chr4:49516764-49517146   Identity: 97.39%    E-value: 1.8e-82   Bit-score: 311.1
This UCNE has 1 paralogous region in Lizard

Painted_turtle (chrPic1):
Region #1:   JH584442:9210710-9211092   Identity: 98.43%    E-value: 1e-71   Bit-score: 275.9

Xenopus (xenTro3):
Fugu (fr2):
Region #1:   chrUn:207640893-207641198   Identity: 85.95%    E-value: 8.4e-57   Bit-score: 220.2
Region #2:   chrUn:203632146-203632411   Identity: 84.33%    E-value: 1.1e-46   Bit-score: 186.6

Medaka (oryLat2):
Region #1:   chr11:6695829-6696162   Identity: 83.28%    E-value: 9.1e-51   Bit-score: 200.3
Region #2:   ultracontig182:2764980-2765246   Identity: 84.76%    E-value: 2.5e-43   Bit-score: 175.6
Region #3:   chr15:4924675-4924817   Identity: 81.25%    E-value: 3.2e-17   Bit-score: 88.8

Stickleback (gasAcu1):
Region #1:   chrX:5497649-5497954   Identity: 87.25%    E-value: 1e-55   Bit-score: 216.8
Region #2:   chrXX:4757895-4758163   Identity: 84.5%    E-value: 3e-44   Bit-score: 178.7

Tetraodon (tetNig2):
Region #1:   chr21:2105333-2105640   Identity: 84.74%    E-value: 3.9e-54   Bit-score: 211.3
Region #2:   chr8:2997352-2997659   Identity: 78.06%    E-value: 7.9e-46   Bit-score: 183.7

Zebrafish (danRer7):
Region #1:   chr19:21554759-21555084   Identity: 86.87%    E-value: 3.2e-49   Bit-score: 196

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):