General information about the entry |
Entry location: | UTR |
Position: | chr18:72925594-72925980  |
Length: | 387 nt |
Sequence: | TSHZ1_Oskar.fasta |
Overlapping gene: | TSHZ1 |
Paralogs: | chr19:31837812-31837996 chr20:51620049-51620259: TSHZ2_Oskar;
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Ultraconserved Genomic Regulatory Block (UGRB): |
TSHZ1_cluster: chr18:72348362-73931585  |
External links: |
CONDOR database: | |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr2:93735375-93735764        Identity: >95%This UCNE has 2 paralogous regions in Chicken
Paralog #1:   chr20:12775836-12776039   Identity: 80.1%
   E-value: 2.9e-23   Bit-score: 113.8 |
Paralog #2:   chr11:9960570-9960804   Identity: 72.13%
   E-value: 3.9e-18   Bit-score: 96.7 |
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr18:84083363-84083753   Identity: 93.86%
   E-value: 5.7e-84   Bit-score: 316.7 |
This UCNE has 2 paralogous regions in Mouse
Paralog #1:   chr2:169666408-169666625   Identity: 78.28%
   E-value: 5.6e-25   Bit-score: 120.7 |
Paralog #2:   chr7:36700272-36700451   Identity: 73.37%
   E-value: 0.000000000000023   Bit-score: 85.5 |
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Armadillo (dasNov1): | Region #1:   scaffold_9921:17437-17823   Identity: 96.64%
   E-value: 9.8e-80   Bit-score: 302.8 |
This UCNE has 2 paralogous regions in Armadillo
Paralog #1:   scaffold_37:148976-149226   Identity: 74.32%
   E-value: 1.3e-21   Bit-score: 109.7 |
Paralog #2:   scaffold_5847:9642-9886   Identity: 70.12%
   E-value: 0.00000000000032   Bit-score: 81.8 |
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Opossum (monDom5): | Region #1:   chr3:303536576-303536964   Identity: 98.97%
   E-value: 2.8e-88   Bit-score: 331.5 |
This UCNE has 2 paralogous regions in Opossum
Paralog #1:   chr1:492324883-492325100   Identity: 77.83%
   E-value: 1.3e-22   Bit-score: 113.2 |
Paralog #2:   chr1:430110111-430110393   Identity: 66.55%
   E-value: 3.1e-16   Bit-score: 92.1 |
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Platypus (ornAna1): | Region #1:   Ultra88:598268-598561   Identity: 98.3%
   E-value: 1.3e-64   Bit-score: 251.9 |
This UCNE has 2 paralogous regions in Platypus
Paralog #1:   Ultra516:4159028-4159245   Identity: 78.73%
   E-value: 1.6e-24   Bit-score: 118.7 |
Paralog #2:   Ultra88:597848-597945   Identity: 83.67%
   E-value: 0.00000014   Bit-score: 62.5 |
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Zebra_finch (taeGut1): | Region #1:   chr2:96797653-96798042   Identity: 98.21%
   E-value: 4.5e-87   Bit-score: 325.9 |
This UCNE has 2 paralogous regions in Zebra_finch
Paralog #1:   chr20:13990610-13990827   Identity: 78.73%
   E-value: 5.7e-24   Bit-score: 116.3 |
Paralog #2:   chr11:15547014-15547248   Identity: 72.13%
   E-value: 2.5e-18   Bit-score: 97.5 |
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Lizard (anoCar2): | Region #1:   chr4:49805257-49805656   Identity: 90.5%
   E-value: 1.1e-78   Bit-score: 298.5 |
This UCNE has 2 paralogous regions in Lizard
Paralog #1:   chrUn_GL343226:681136-681353   Identity: 78.73%
   E-value: 1.7e-25   Bit-score: 121.8 |
Paralog #2:   chrUn_GL343299:156590-156778   Identity: 74.61%
   E-value: 7.1e-17   Bit-score: 93.2 |
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Painted_turtle (chrPic1): | Region #1:   JH584442:8879306-8879693   Identity: 98.2%
   E-value: 2.1e-86   Bit-score: 324.7 |
This UCNE has 2 paralogous regions in Painted_turtle
Paralog #1:   JH584481:896915-897132   Identity: 78.73%
   E-value: 8.5e-24   Bit-score: 116.7 |
Paralog #2:   JH584557:12951393-12951641   Identity: 72.16%
   E-value: 1.4e-19   Bit-score: 102.8 |
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Xenopus (xenTro3): | This UCNE has 2 paralogous regions in Xenopus
Paralog #1:   GL172784:2011670-2011887   Identity: 78.28%
   E-value: 1.5e-22   Bit-score: 111.8 |
Paralog #2:   GL172730:1737901-1738168   Identity: 68.23%
   E-value: 0.0000000000000014   Bit-score: 88.7 |
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Fugu (fr2): | This UCNE has 2 paralogous regions in Fugu
Paralog #1:   chrUn:247682402-247682619   Identity: 78.73%
   E-value: 2.8e-31   Bit-score: 135.4 |
Paralog #2:   chrUn:7498722-7498890   Identity: 67.46%
   E-value: 0.000000000011   Bit-score: 70.4 |
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Medaka (oryLat2): | This UCNE has 3 paralogous regions in Medaka
Paralog #1:   chr7:24992294-24992511   Identity: 78.28%
   E-value: 6.3e-29   Bit-score: 127.8 |
Paralog #2:   chr6:25924587-25924761   Identity: 67.43%
   E-value: 0.000000000018   Bit-score: 69.8 |
Paralog #3:   chr3:35606901-35606996   Identity: 76.04%
   E-value: 0.000000097   Bit-score: 57.4 |
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Stickleback (gasAcu1): | Region #1:   chrX:5440762-5440884   Identity: 71.54%
   E-value: 0.000000023   Bit-score: 59.5 |
This UCNE has 3 paralogous regions in Stickleback
Paralog #1:   chrXII:14619706-14619923   Identity: 77.83%
   E-value: 3.7e-29   Bit-score: 128.6 |
Paralog #2:   chrXIX:17678780-17678946   Identity: 68.26%
   E-value: 0.0000000000095   Bit-score: 70.7 |
Paralog #3:   chrII:1624771-1624864   Identity: 78.72%
   E-value: 0.0000000037   Bit-score: 62.1 |
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Tetraodon (tetNig2): | This UCNE has 2 paralogous regions in Tetraodon
Paralog #1:   chr9:9853903-9854106   Identity: 78.64%
   E-value: 4.9e-29   Bit-score: 128 |
Paralog #2:   chr13:7069017-7069185   Identity: 67.46%
   E-value: 0.0000000000092   Bit-score: 70.6 |
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Zebrafish (danRer7): | Region #1:   chr19:21851911-21852132   Identity: 73.09%
   E-value: 2e-20   Bit-score: 100.3 |
This UCNE has 3 paralogous regions in Zebrafish
Paralog #1:   chr23:38597081-38597298   Identity: 79.19%
   E-value: 2.7e-27   Bit-score: 123.2 |
Paralog #2:   chr7:48389038-48389154   Identity: 78.63%
   E-value: 0.000000000033   Bit-score: 69.7 |
Paralog #3:   chr18:14327219-14327385   Identity: 63.47%
   E-value: 0.000026   Bit-score: 50.1 |
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Lamprey (petMar1): | This UCNE has 1 paralogous region in Lamprey
Paralog #1:   Contig2517:1221-1374   Identity: 73.55%
   E-value: 0.000000000045   Bit-score: 73.1 |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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