General information about the entry |
Entry location: | intergenic |
Position: | chr18:75957090-75957347  |
Length: | 258 nt |
Sequence: | SALL3_Ariel.fasta |
Upstream gene: | GALR1 |
Downstream gene: | SALL3 |
Paralogs: | chr16:51732833-51733031: IRXB_Ariel;
|
Ultraconserved Genomic Regulatory Block (UGRB): |
SALL3_cluster: chr18:75544796-77044092  |
External links: |
CONDOR database: | |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
|
Conservation in chicken: |
Chicken (galGal3): | Region: chr2:58569071-58569328        Identity: >95%This UCNE has 2 paralogous regions in Chicken
Paralog #1:   chr11:5900332-5900563   Identity: 66.94%
   E-value: 0.000000000093   Bit-score: 71.6 |
Paralog #2:   chr11:6355433-6355628   Identity: 65.48%
   E-value: 0.000000041   Bit-score: 62.8 |
|
|
Conservation in other species: |
Mouse (mm10): | Region #1:   chr18:81548347-81548603   Identity: 95.72%
   E-value: 1.3e-47   Bit-score: 195.4 |
This UCNE has 1 paralogous region in Mouse
Paralog #1:   chr8:89516292-89516493   Identity: 67.48%
   E-value: 0.0000000018   Bit-score: 68.7 |
|
|
Armadillo (dasNov1): | Region #1:   scaffold_7824:31752-32007   Identity: 96.89%
   E-value: 1.5e-43   Bit-score: 182 |
|
Opossum (monDom5): | Region #1:   chr3:308341319-308341575   Identity: 98.83%
   E-value: 4.8e-46   Bit-score: 190.5 |
This UCNE has 1 paralogous region in Opossum
Paralog #1:   chr1:441160248-441160440   Identity: 68.21%
   E-value: 0.000000045   Bit-score: 64.4 |
|
|
Platypus (ornAna1): | Region #1:   Ultra88:8902-9155   Identity: 96.46%
   E-value: 1.8e-49   Bit-score: 201.1 |
This UCNE has 2 paralogous regions in Platypus
Paralog #1:   Contig65:977382-977525   Identity: 74.66%
   E-value: 0.00000000036   Bit-score: 70.5 |
Paralog #2:   Contig65:408762-408967   Identity: 62.68%
   E-value: 0.0000026   Bit-score: 57.7 |
|
|
Zebra_finch (taeGut1): | Region #1:   chr2:74311537-74311793   Identity: 98.44%
   E-value: 3.4e-50   Bit-score: 202.8 |
This UCNE has 2 paralogous regions in Zebra_finch
Paralog #1:   chr11:9538050-9538273   Identity: 66.81%
   E-value: 0.000000000016   Bit-score: 74.3 |
Paralog #2:   chr11:9912602-9912785   Identity: 66.49%
   E-value: 0.000000064   Bit-score: 62.4 |
|
|
Lizard (anoCar2): | Region #1:   chr4:51663316-51663572   Identity: 95.72%
   E-value: 4.9e-51   Bit-score: 206.1 |
This UCNE has 2 paralogous regions in Lizard
Paralog #1:   chrUn_GL343227:467658-467856   Identity: 67.33%
   E-value: 0.00000000059   Bit-score: 69.6 |
Paralog #2:   chrUn_GL343227:1057435-1057637   Identity: 62.56%
   E-value: 0.0000031   Bit-score: 57.3 |
|
|
Painted_turtle (chrPic1): | Region #1:   JH584442:6392830-6393084   Identity: 97.67%
   E-value: 5.8e-49   Bit-score: 199.7 |
This UCNE has 2 paralogous regions in Painted_turtle
Paralog #1:   JH584557:5259354-5259554   Identity: 67.96%
   E-value: 0.00000000048   Bit-score: 70.5 |
Paralog #2:   JH584557:5901658-5901866   Identity: 66.98%
   E-value: 0.000000013   Bit-score: 65.7 |
|
|
Xenopus (xenTro3): | Region #1:   GL173521:99455-99708   Identity: 93%
   E-value: 8.2e-43   Bit-score: 178.5 |
This UCNE has 2 paralogous regions in Xenopus
Paralog #1:   GL172748:1665011-1665211   Identity: 67.94%
   E-value: 0.0000000058   Bit-score: 66.1 |
Paralog #2:   GL172748:2178804-2178983   Identity: 65.38%
   E-value: 0.000018   Bit-score: 54.5 |
|
|
Fugu (fr2): | Region #1:   chrUn:203276065-203276213   Identity: 85.23%
   E-value: 4.4e-24   Bit-score: 110.9 |
This UCNE has 2 paralogous regions in Fugu
Paralog #1:   chrUn:76421193-76421338   Identity: 69.59%
   E-value: 0.00000000054   Bit-score: 64.1 |
Paralog #2:   chrUn:76304588-76304736   Identity: 64.47%
   E-value: 0.0000024   Bit-score: 52 |
|
|
Medaka (oryLat2): | This UCNE has 2 paralogous regions in Medaka
Paralog #1:   chr3:29206977-29207121   Identity: 70.75%
   E-value: 0.00000000097   Bit-score: 63.4 |
Paralog #2:   chr3:29367042-29367190   Identity: 65.13%
   E-value: 0.0000046   Bit-score: 51.2 |
|
|
Stickleback (gasAcu1): | Region #1:   chrXX:4310805-4310991   Identity: 87.17%
   E-value: 1.7e-32   Bit-score: 139.1 |
This UCNE has 2 paralogous regions in Stickleback
Paralog #1:   chrII:17684888-17685032   Identity: 69.39%
   E-value: 0.0000000049   Bit-score: 61.2 |
Paralog #2:   chrII:17814515-17814663   Identity: 64.47%
   E-value: 0.0000075   Bit-score: 50.6 |
|
|
Tetraodon (tetNig2): | Region #1:   chr8:2603914-2604184   Identity: 74.54%
   E-value: 1e-33   Bit-score: 143 |
This UCNE has 2 paralogous regions in Tetraodon
Paralog #1:   chrUn_random:36659840-36659985   Identity: 67.57%
   E-value: 0.000000004   Bit-score: 61.3 |
Paralog #2:   chrUn_random:36541948-36542096   Identity: 64.47%
   E-value: 0.0000021   Bit-score: 52.2 |
|
|
Zebrafish (danRer7): | Region #1:   chr16:7734544-7734746   Identity: 71.84%
   E-value: 0.00000000000011   Bit-score: 77.3 |
This UCNE has 1 paralogous region in Zebrafish
Paralog #1:   chr7:38604502-38604648   Identity: 67.35%
   E-value: 0.0000034   Bit-score: 52.5 |
|
|
Lamprey (petMar1): | Region #1:   Contig806:6871-7051   Identity: 72.83%
   E-value: 0.000000000069   Bit-score: 71.8 |
Region #2:   Contig8401:15835-16018   Identity: 67.91%
   E-value: 0.00000062   Bit-score: 58.7 |
Region #3:   Contig127:74035-74228   Identity: 66.5%
   E-value: 0.0000034   Bit-score: 56.3 |
|
Ciona_intestinalis (ci2): |
|
Sea_urchin (strPur2): |
|
Lancelet (braFlo1): |
|