General information about the entry |
Entry location: | intergenic |
Position: | chr19:31998891-31999153  |
Length: | 263 nt |
Sequence: | TSHZ3_Poseidon.fasta |
Upstream gene: | TSHZ3 |
Downstream gene: | ZNF507 |
Paralogs: | chr18:72822534-72822687: TSHZ1_Poseidon; chr20:51380171-51380320: TSHZ2_Poseidon; chr4:173374392-173374488
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Ultraconserved Genomic Regulatory Block (UGRB): |
TSHZ3_cluster: chr19:30379760-32757968  |
External links: |
CONDOR database: | CRCNE00007674; |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr11:10030841-10031102        Identity: >95%This UCNE has 2 paralogous regions in Chicken
Paralog #1:   chr2:93796674-93796841   Identity: 76.02%
   E-value: 0.0000000001   Bit-score: 71.5 |
Paralog #2:   chr20:12866501-12866645   Identity: 72.97%
   E-value: 0.0000027   Bit-score: 56.8 |
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr7:36537760-36538021   Identity: 98.47%
   E-value: 4.5e-55   Bit-score: 220.1 |
This UCNE has 2 paralogous regions in Mouse
Paralog #1:   chr18:84164160-84164301   Identity: 76.39%
   E-value: 0.0000000044   Bit-score: 67.4 |
Paralog #2:   chr2:169445441-169445572   Identity: 72.93%
   E-value: 0.000022   Bit-score: 55.1 |
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Armadillo (dasNov1): | Region #1:   scaffold_94730:6838-7100   Identity: 100%
   E-value: 1.9e-53   Bit-score: 214.9 |
This UCNE has 1 paralogous region in Armadillo
Paralog #1:   scaffold_1666:19913-20050   Identity: 72.86%
   E-value: 0.000013   Bit-score: 56 |
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Opossum (monDom5): | Region #1:   chr1:429930741-429931003   Identity: 99.24%
   E-value: 2.5e-52   Bit-score: 211.4 |
This UCNE has 3 paralogous regions in Opossum
Paralog #1:   chr3:303379996-303380163   Identity: 75.44%
   E-value: 0.00000000072   Bit-score: 70.4 |
Paralog #2:   chr5:97391590-97391815   Identity: 66.23%
   E-value: 0.00000001   Bit-score: 66.6 |
Paralog #3:   chr1:492586439-492586575   Identity: 73.38%
   E-value: 0.000015   Bit-score: 56 |
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Platypus (ornAna1): | Region #1:   Ultra517:3228345-3228607   Identity: 98.86%
   E-value: 3.3e-56   Bit-score: 223.5 |
This UCNE has 3 paralogous regions in Platypus
Paralog #1:   Contig8595:14857-15112   Identity: 73.05%
   E-value: 2.6e-21   Bit-score: 107.5 |
Paralog #2:   Contig33635:3709-3850   Identity: 79.02%
   E-value: 0.000000000044   Bit-score: 73.6 |
Paralog #3:   Ultra516:4007044-4007180   Identity: 73.38%
   E-value: 0.00000072   Bit-score: 59.6 |
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Zebra_finch (taeGut1): | Region #1:   chr11:15625851-15626113   Identity: 98.48%
   E-value: 5.3e-52   Bit-score: 208.8 |
This UCNE has 2 paralogous regions in Zebra_finch
Paralog #1:   chr2:96861402-96861552   Identity: 77.27%
   E-value: 0.000000009   Bit-score: 65.2 |
Paralog #2:   chr20:14083911-14084055   Identity: 72.97%
   E-value: 0.0000024   Bit-score: 57.2 |
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Lizard (anoCar2): | Region #1:   chrUn_GL343509:3930-4198   Identity: 91.82%
   E-value: 4.5e-49   Bit-score: 199.6 |
This UCNE has 3 paralogous regions in Lizard
Paralog #1:   chr4:49700514-49700681   Identity: 74.85%
   E-value: 0.000000000013   Bit-score: 75.2 |
Paralog #2:   chrUn_GL343216:2287120-2287338   Identity: 65.16%
   E-value: 0.0000000023   Bit-score: 67.7 |
Paralog #3:   chrUn_GL343226:862344-862480   Identity: 72.66%
   E-value: 0.0000025   Bit-score: 57.6 |
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Painted_turtle (chrPic1): | Region #1:   JH584557:13070277-13070539   Identity: 98.1%
   E-value: 1.1e-51   Bit-score: 208.8 |
This UCNE has 3 paralogous regions in Painted_turtle
Paralog #1:   JH584705:5847479-5847719   Identity: 73.58%
   E-value: 8.6e-18   Bit-score: 96.2 |
Paralog #2:   JH584442:8957281-8957448   Identity: 76.02%
   E-value: 0.000000000091   Bit-score: 72.9 |
Paralog #3:   JH584481:748985-749121   Identity: 73.38%
   E-value: 0.0000055   Bit-score: 57 |
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Xenopus (xenTro3): | Region #1:   GL172730:1616578-1616853   Identity: 90.22%
   E-value: 2.4e-42   Bit-score: 177 |
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Fugu (fr2): | Region #1:   chrUn:189707197-189707407   Identity: 84.43%
   E-value: 1.5e-35   Bit-score: 149 |
This UCNE has 3 paralogous regions in Fugu
Paralog #1:   chrUn:207611097-207611267   Identity: 74.42%
   E-value: 5.5e-17   Bit-score: 87.4 |
Paralog #2:   chrUn:203589066-203589232   Identity: 73.81%
   E-value: 1.7e-16   Bit-score: 85.8 |
Paralog #3:   chrUn:247667110-247667266   Identity: 68.55%
   E-value: 0.000000019   Bit-score: 59 |
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Medaka (oryLat2): | Region #1:   chr3:35559022-35559260   Identity: 81.17%
   E-value: 5e-32   Bit-score: 137.5 |
This UCNE has 3 paralogous regions in Medaka
Paralog #1:   chr11:6620944-6621114   Identity: 75%
   E-value: 0.0000000000000085   Bit-score: 80.2 |
Paralog #2:   ultracontig182:2585800-2585967   Identity: 73.96%
   E-value: 0.000000000000038   Bit-score: 78.1 |
Paralog #3:   chr7:25042691-25042846   Identity: 68.35%
   E-value: 0.00000073   Bit-score: 53.9 |
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Stickleback (gasAcu1): | Region #1:   chrII:1678397-1678601   Identity: 86.83%
   E-value: 5.3e-35   Bit-score: 147.4 |
This UCNE has 3 paralogous regions in Stickleback
Paralog #1:   chrX:5461689-5461859   Identity: 73.84%
   E-value: 0.0000000000000013   Bit-score: 83 |
Paralog #2:   chrXX:4700592-4700758   Identity: 73.21%
   E-value: 0.0000000000000038   Bit-score: 81.5 |
Paralog #3:   chrXII:14601722-14601869   Identity: 68.67%
   E-value: 0.00000013   Bit-score: 56.4 |
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Tetraodon (tetNig2): | This UCNE has 3 paralogous regions in Tetraodon
Paralog #1:   chr21:2079804-2079974   Identity: 74.42%
   E-value: 2e-16   Bit-score: 85.5 |
Paralog #2:   chrUn_random:72061200-72061366   Identity: 73.21%
   E-value: 0.0000000000000019   Bit-score: 82.3 |
Paralog #3:   chr9:9833889-9834048   Identity: 68.1%
   E-value: 0.00000014   Bit-score: 56.1 |
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Zebrafish (danRer7): | Region #1:   chr7:47420318-47420576   Identity: 81.51%
   E-value: 3e-35   Bit-score: 149 |
This UCNE has 1 paralogous region in Zebrafish
Paralog #1:   chr19:21779475-21779680   Identity: 72.17%
   E-value: 0.0000000000000021   Bit-score: 83.1 |
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Lamprey (petMar1): |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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