General information about the entry |
Entry location: | intron |
Position: | chr2:63240650-63240968  |
Length: | 319 nt |
Sequence: | OTX1_Norma_1.fasta |
Overlapping gene: | EHBP1 |
Paralogs: | chr14:57366538-57366679
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Ultraconserved Genomic Regulatory Block (UGRB): |
OTX1_cluster: chr2:63014713-63662144  |
External links: |
CONDOR database: | |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr3:9274602-9274920        Identity: >95%This UCNE has 1 paralogous region in Chicken
Paralog #1:   chr5:58317547-58317701   Identity: 63.87%
   E-value: 0.000067   Bit-score: 52.4 |
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr11:22034570-22034893   Identity: 95.69%
   E-value: 3e-81   Bit-score: 307.4 |
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Armadillo (dasNov1): | Region #1:   scaffold_13219:2670-2988   Identity: 99.06%
   E-value: 5.2e-81   Bit-score: 306.7 |
This UCNE has 1 paralogous region in Armadillo
Paralog #1:   scaffold_60632:616-818   Identity: 62.8%
   E-value: 0.0000065   Bit-score: 57.3 |
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Opossum (monDom5): | Region #1:   chr1:629293579-629293897   Identity: 98.75%
   E-value: 6.7e-84   Bit-score: 316.6 |
This UCNE has 1 paralogous region in Opossum
Paralog #1:   chr1:257768530-257768761   Identity: 60.68%
   E-value: 0.0000043   Bit-score: 58.1 |
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Platypus (ornAna1): | Region #1:   Ultra56:5075379-5075697   Identity: 98.75%
   E-value: 7.2e-82   Bit-score: 309 |
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Zebra_finch (taeGut1): | Region #1:   chr3:1296895-1297213   Identity: 96.87%
   E-value: 1e-77   Bit-score: 294.6 |
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Lizard (anoCar2): | Region #1:   chr1:120939815-120940128   Identity: 96.5%
   E-value: 2.1e-80   Bit-score: 304 |
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Painted_turtle (chrPic1): | Region #1:   JH584519:813258-813576   Identity: 96.87%
   E-value: 1.1e-78   Bit-score: 298.7 |
This UCNE has 1 paralogous region in Painted_turtle
Paralog #1:   JH584658:2611995-2612215   Identity: 61.04%
   E-value: 0.000012   Bit-score: 56.1 |
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Xenopus (xenTro3): | Region #1:   GL173109:761908-762231   Identity: 87.96%
   E-value: 6.5e-62   Bit-score: 242.3 |
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Fugu (fr2): |
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Medaka (oryLat2): | Region #1:   chr1:10570642-10570918   Identity: 67.14%
   E-value: 1.9e-23   Bit-score: 109.3 |
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Stickleback (gasAcu1): |
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Tetraodon (tetNig2): |
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Zebrafish (danRer7): | Region #1:   chr17:24115653-24115951   Identity: 76%
   E-value: 4e-40   Bit-score: 165.5 |
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Lamprey (petMar1): | Region #1:   Contig28435:4177-4408   Identity: 63.14%
   E-value: 0.00000014   Bit-score: 61.2 |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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