General information about the entry |
Entry location: | UTR |
Position: | chr2:100017397-100017694  |
Length: | 298 nt |
Sequence: | AFF3_Abraham.fasta |
Overlapping gene: | REV1 |
Paralogs: | |
Ultraconserved Genomic Regulatory Block (UGRB): |
AFF3_cluster: chr2:100017397-100516050  |
External links: |
CONDOR database: | |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr1:136719300-136719604        Identity: >95%
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr1:38052781-38053077   Identity: 93.65%
   E-value: 5.6e-33   Bit-score: 146.9 |
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Armadillo (dasNov1): | Region #1:   scaffold_1401:43803-44099   Identity: 95.97%
   E-value: 1.1e-30   Bit-score: 139.5 |
Region #2:   scaffold_620:81525-81766   Identity: 90.28%
   E-value: 4.2e-20   Bit-score: 104.3 |
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Opossum (monDom5): | Region #1:   chr7:60918353-60918652   Identity: 93.67%
   E-value: 7.7e-24   Bit-score: 117 |
This UCNE has 2 paralogous regions in Opossum
Paralog #1:   chr2:488236246-488236521   Identity: 80.35%
   E-value: 0.00000000000071   Bit-score: 80.6 |
Paralog #2:   chr1:534774823-534774991   Identity: 89.94%
   E-value: 0.000000031   Bit-score: 65.2 |
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Platypus (ornAna1): | Region #1:   chr20:47309-47608   Identity: 93.33%
   E-value: 1.2e-36   Bit-score: 158.6 |
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Zebra_finch (taeGut1): | Region #1:   chr1:31156265-31156569   Identity: 92.46%
   E-value: 1.2e-34   Bit-score: 151.3 |
This UCNE has 1 paralogous region in Zebra_finch
Paralog #1:   chr1:31157112-31157361   Identity: 88.46%
   E-value: 3.3e-22   Bit-score: 110 |
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Lizard (anoCar2): | Region #1:   chrUn_GL343456:78897-79197   Identity: 88.2%
   E-value: 9.8e-27   Bit-score: 125.6 |
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Painted_turtle (chrPic1): | Region #1:   JH584466:2184585-2184889   Identity: 91.15%
   E-value: 2e-31   Bit-score: 141.7 |
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Xenopus (xenTro3): | Region #1:   GL172957:832817-833114   Identity: 80.46%
   E-value: 4.6e-21   Bit-score: 106.5 |
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Fugu (fr2): |
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Medaka (oryLat2): |
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Stickleback (gasAcu1): |
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Tetraodon (tetNig2): |
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Zebrafish (danRer7): |
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Lamprey (petMar1): |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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