General information about the entry |
Entry location: | intron |
Position: | chr2:144437277-144437587  |
Length: | 311 nt |
Sequence: | ZEB2_Claudia.fasta |
Overlapping gene: | ARHGAP15 |
Paralogs: | |
Ultraconserved Genomic Regulatory Block (UGRB): |
ZEB2_cluster: chr2:143914500-147708836  |
External links: |
CONDOR database: | CRCNE00002857; |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | uc.70 http://users.soe.ucsc.edu/~jill/ultra.html |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr7:34613241-34613551        Identity: >95%
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr2:44299280-44299590   Identity: 97.75%
   E-value: 3.6e-74   Bit-score: 283.8 |
|
Armadillo (dasNov1): | Region #1:   scaffold_247:115957-116267   Identity: 98.39%
   E-value: 1.3e-70   Bit-score: 272.2 |
|
Opossum (monDom5): | Region #1:   chr4:143777784-143778094   Identity: 97.11%
   E-value: 3.3e-67   Bit-score: 261.1 |
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Platypus (ornAna1): | Region #1:   Contig814:267787-268095   Identity: 92.58%
   E-value: 9e-66   Bit-score: 255.5 |
This UCNE has 1 paralogous region in Platypus
Paralog #1:   Contig48439:2390-2492   Identity: 87.38%
   E-value: 0.000000000012   Bit-score: 75.6 |
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Zebra_finch (taeGut1): | Region #1:   chr7:35798077-35798387   Identity: 97.75%
   E-value: 2.3e-72   Bit-score: 276.7 |
This UCNE has 1 paralogous region in Zebra_finch
Paralog #1:   chrUn:35200232-35200478   Identity: 66.94%
   E-value: 7.9e-17   Bit-score: 92.2 |
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Lizard (anoCar2): | Region #1:   chr1:101812904-101813215   Identity: 97.12%
   E-value: 3.8e-74   Bit-score: 283.1 |
|
Painted_turtle (chrPic1): | Region #1:   JH584780:630669-630979   Identity: 97.11%
   E-value: 5.5e-71   Bit-score: 273.2 |
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Xenopus (xenTro3): | Region #1:   GL172922:45734-46044   Identity: 92.6%
   E-value: 1.7e-61   Bit-score: 240.9 |
|
Fugu (fr2): | Region #1:   chrUn:183182342-183182596   Identity: 78.04%
   E-value: 5.6e-38   Bit-score: 157.4 |
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Medaka (oryLat2): | Region #1:   chr2:5292554-5292816   Identity: 74.52%
   E-value: 3.6e-32   Bit-score: 138.2 |
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Stickleback (gasAcu1): | Region #1:   chrI:28058434-28058610   Identity: 70.95%
   E-value: 0.0000000000000019   Bit-score: 82.8 |
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Tetraodon (tetNig2): | Region #1:   chr3:439786-439943   Identity: 74.38%
   E-value: 9.1e-19   Bit-score: 93.6 |
|
Zebrafish (danRer7): | Region #1:   Zv9_NA361:49663-49921   Identity: 69.89%
   E-value: 3.8e-25   Bit-score: 115.7 |
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Lamprey (petMar1): |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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