General information about the entry |
Entry location: | intron |
Position: | chr2:144762336-144763181  |
Length: | 846 nt |
Sequence: | ZEB2_Gandalf.fasta |
Overlapping gene: | GTDC1 |
Paralogs: | |
Ultraconserved Genomic Regulatory Block (UGRB): |
ZEB2_cluster: chr2:143914500-147708836  |
External links: |
CONDOR database: | CRCNE00002827; CRCNE00002826; CRCNE00002825; |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | uc.73 http://users.soe.ucsc.edu/~jill/ultra.html |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
|
Conservation in chicken: |
Chicken (galGal3): | Region: chr7:34769767-34770627        Identity: >95%
|
Conservation in other species: |
Mouse (mm10): | Region #1:   chr2:44632635-44633479   Identity: 98.7%
   E-value: 1.8e-156   Bit-score: 558.7 |
|
Armadillo (dasNov1): | Region #1:   scaffold_101719:6201-7044   Identity: 98.93%
   E-value: 8.2e-145   Bit-score: 520.1 |
|
Opossum (monDom5): | Region #1:   chr4:144176782-144177629   Identity: 98.35%
   E-value: 6.9e-135   Bit-score: 487.4 |
|
Platypus (ornAna1): | Region #1:   Contig814:108073-108983   Identity: 84.21%
   E-value: 1e-142   Bit-score: 512.5 |
This UCNE has 1 paralogous region in Platypus
Paralog #1:   Contig814:104631-105541   Identity: 80.81%
   E-value: 7e-128   Bit-score: 463.2 |
|
|
Zebra_finch (taeGut1): | Region #1:   chr7:35956548-35957423   Identity: 95.09%
   E-value: 1.1e-153   Bit-score: 548.3 |
|
Lizard (anoCar2): | Region #1:   chr1:102113946-102114803   Identity: 95.92%
   E-value: 2.1e-158   Bit-score: 564.5 |
|
Painted_turtle (chrPic1): | Region #1:   JH584780:866197-867042   Identity: 98.46%
   E-value: 1.7e-167   Bit-score: 595.3 |
|
Xenopus (xenTro3): | Region #1:   GL172868:1507123-1507989   Identity: 90.08%
   E-value: 1.5e-131   Bit-score: 475.1 |
|
Fugu (fr2): | Region #1:   chrUn:183124423-183125004   Identity: 59.87%
   E-value: 9.4e-29   Bit-score: 128.2 |
|
Medaka (oryLat2): |
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Stickleback (gasAcu1): |
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Tetraodon (tetNig2): | Region #1:   chr3:472440-472568   Identity: 82.17%
   E-value: 4.4e-16   Bit-score: 86.1 |
Region #2:   chr3:472833-472982   Identity: 72.37%
   E-value: 0.0000000015   Bit-score: 64.4 |
|
Zebrafish (danRer7): | Region #1:   chr6:830347-830837   Identity: 58.56%
   E-value: 0.000000000029   Bit-score: 71.1 |
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Lamprey (petMar1): |
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Ciona_intestinalis (ci2): |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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