General information about the entry |
Entry location: | UTR |
Position: | chr2:145145584-145146507  |
Length: | 924 nt |
Sequence: | ZEB2_Haruki.fasta |
Overlapping gene: | ZEB2 |
Paralogs: | chr4:16360878-16361810
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Ultraconserved Genomic Regulatory Block (UGRB): |
ZEB2_cluster: chr2:143914500-147708836  |
External links: |
CONDOR database: | CRCNE00011254; CRCNE00011249; |
VISTA Enhancer Browser: | |
UCE (Bejerano et al. 2004): | uc.75 http://users.soe.ucsc.edu/~jill/ultra.html |
Other browsers view: | [Ensembl]
[ECR browser]
[Ancora]
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Conservation in chicken: |
Chicken (galGal3): | Region: chr7:34929371-34930306        Identity: >95%
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Conservation in other species: |
Mouse (mm10): | Region #1:   chr2:44987123-44988062   Identity: 95.97%
   E-value: 5.7e-129   Bit-score: 467.4 |
|
Armadillo (dasNov1): | Region #1:   scaffold_1806:91993-92804   Identity: 97.05%
   E-value: 1.9e-92   Bit-score: 346.3 |
|
Opossum (monDom5): | Region #1:   chr4:144641883-144642818   Identity: 96.92%
   E-value: 6.5e-66   Bit-score: 258.4 |
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Platypus (ornAna1): | Region #1:   Contig3291:9015-9980   Identity: 93.28%
   E-value: 3e-127   Bit-score: 461.3 |
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Zebra_finch (taeGut1): | Region #1:   chr7:36137079-36138010   Identity: 97.43%
   E-value: 8.1e-139   Bit-score: 499 |
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Lizard (anoCar2): | Region #1:   chr1:102389439-102390383   Identity: 94.13%
   E-value: 8.5e-121   Bit-score: 439.7 |
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Painted_turtle (chrPic1): |
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Xenopus (xenTro3): | Region #1:   GL172868:1368236-1369257   Identity: 82.86%
   E-value: 5.5e-95   Bit-score: 353.7 |
This UCNE has 1 paralogous region in Xenopus
Paralog #1:   GL173544:227320-227914   Identity: 55.45%
   E-value: 0.000086   Bit-score: 54.1 |
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Fugu (fr2): | Region #1:   chrUn:183093260-183094056   Identity: 75.61%
   E-value: 2.5e-81   Bit-score: 303 |
This UCNE has 1 paralogous region in Fugu
Paralog #1:   chrUn:266004801-266005016   Identity: 65%
   E-value: 0.00000047   Bit-score: 56.2 |
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Medaka (oryLat2): | Region #1:   chr2:5533235-5533553   Identity: 82.12%
   E-value: 3.5e-29   Bit-score: 129.9 |
Region #2:   chr2:5532760-5533041   Identity: 67.85%
   E-value: 0.000000000041   Bit-score: 69.8 |
Region #3:   chr2:5532204-5532343   Identity: 85.92%
   E-value: 0.00000000019   Bit-score: 67.6 |
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Stickleback (gasAcu1): | Region #1:   chrI:28146530-28147369   Identity: 78.12%
   E-value: 1.8e-84   Bit-score: 313.6 |
Region #2:   chrUn:18180164-18180965   Identity: 63.49%
   E-value: 1.5e-38   Bit-score: 161 |
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Tetraodon (tetNig2): | Region #1:   chr3:495089-495902   Identity: 73.05%
   E-value: 2.4e-69   Bit-score: 263.1 |
|
Zebrafish (danRer7): | Region #1:   chr9:26870340-26870940   Identity: 71.63%
   E-value: 2.8e-29   Bit-score: 131 |
Region #2:   chr6:908517-909140   Identity: 66.01%
   E-value: 6.3e-21   Bit-score: 103.3 |
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Lamprey (petMar1): |
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Ciona_intestinalis (ci2): | Region #1:   chr09q:3492697-3493240   Identity: 56.97%
   E-value: 0.00000052   Bit-score: 58.2 |
Region #2:   scaffold_1407:498-1101   Identity: 56.38%
   E-value: 0.0000018   Bit-score: 56.4 |
Region #3:   chr09q:3495323-3495860   Identity: 56.26%
   E-value: 0.0000027   Bit-score: 55.9 |
Region #4:   chr09q:3497222-3497809   Identity: 55.65%
   E-value: 0.000015   Bit-score: 53.3 |
Region #5:   chr09q:3496246-3496694   Identity: 58.02%
   E-value: 0.000064   Bit-score: 51.3 |
Region #6:   chr09q:3494687-3495128   Identity: 57.11%
   E-value: 0.00008   Bit-score: 51 |
Region #7:   scaffold_167:96059-96644   Identity: 55.45%
   E-value: 0.000089   Bit-score: 50.8 |
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Sea_urchin (strPur2): |
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Lancelet (braFlo1): |
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