UCNE: HOXD_Benjamin
(id = 21254)

General information about the entry
Entry location:intergenic
Position:chr2:176235689-176235955
Length:267 nt
Sequence:HOXD_Benjamin.fasta
Upstream gene:ATP5G3
Downstream gene:KIAA1715
Paralogs:
Ultraconserved Genomic Regulatory Block (UGRB): HOXD_cluster: chr2:175967909-178084536
External links:
CONDOR database:CRCNE00010479; CRCNE00010480;
VISTA Enhancer Browser:
UCE (Bejerano et al. 2004):
Other browsers view:[Ensembl] [ECR browser] [Ancora]
Conservation in chicken:
Chicken (galGal3): Region: chr7:17701671-17701937        Identity: >95%
Conservation in other species:
Mouse (mm10):
Region #1:   chr2:74070972-74071238   Identity: 95.13%    E-value: 6.3e-64   Bit-score: 249.6

Armadillo (dasNov1):
Region #1:   scaffold_33852:5788-6054   Identity: 97.75%    E-value: 5.6e-66   Bit-score: 256.5

Opossum (monDom5):
Region #1:   chr4:186534486-186534752   Identity: 96.25%    E-value: 4.6e-65   Bit-score: 253.8

Platypus (ornAna1):
Region #1:   Ultra514:14238441-14238708   Identity: 97.01%    E-value: 5.3e-65   Bit-score: 252.7

Zebra_finch (taeGut1):
Region #1:   chr7:16715801-16716067   Identity: 94.01%    E-value: 5.2e-59   Bit-score: 232.2

Lizard (anoCar2):
Region #1:   chrUn_GL343377:172290-172583   Identity: 69.9%    E-value: 3.9e-25   Bit-score: 120.1

Painted_turtle (chrPic1):
Region #1:   JH584712:1678093-1678359   Identity: 95.88%    E-value: 4.9e-62   Bit-score: 243.2

Xenopus (xenTro3):
Region #1:   GL172799:1042598-1042870   Identity: 87.18%    E-value: 1.4e-47   Bit-score: 194.5

Fugu (fr2):
Region #1:   chrUn:173337411-173337685   Identity: 75.09%    E-value: 1.2e-39   Bit-score: 162.7

Medaka (oryLat2):
Region #1:   chr21:24460998-24461270   Identity: 76%    E-value: 3.5e-39   Bit-score: 161.3

Stickleback (gasAcu1):
Region #1:   chrXVI:9912499-9912792   Identity: 70.95%    E-value: 7.7e-36   Bit-score: 150.2

Tetraodon (tetNig2):
Region #1:   chr2:13521096-13521374   Identity: 75.8%    E-value: 5.8e-41   Bit-score: 167.1

Zebrafish (danRer7):
Region #1:   chr9:2271983-2272221   Identity: 67.06%    E-value: 6.5e-20   Bit-score: 98.1

Lamprey (petMar1):
Ciona_intestinalis (ci2):
Sea_urchin (strPur2):
Lancelet (braFlo1):